[BioPython] biopython 1.21 problem with Martel

[Francisco Domingues]

Got python-xml.
Biopython installation and tests work fine now.

Thanks Andreas
Francisco


Andreas Kuntzagk wrote:

>>I am running SuSe Linux 8.1, I have python 2.2.1
>>    
>>
>
>Me too.
>
>  
>
>>Still it fails the tests:
>>...biopython-1.21/Martel> python setup.py installtest
>>running installtest
>>###### running tests in test_Expression ###############
>>Traceback (most recent call last):
>>  File "setup.py", line 158, in ?
>>  File "/usr/lib/python2.2/distutils/core.py", line 138, in setup
>>    dist.run_commands()
>>  File "/usr/lib/python2.2/distutils/dist.py", line 893, in run_commands
>>    self.run_command(cmd)
>>  File "/usr/lib/python2.2/distutils/dist.py", line 913, in run_command
>>    cmd_obj.run()
>>  File "setup.py", line 139, in run
>>  File "run_tests.py", line 16, in main
>>    module = __import__(name)
>>  File "test_Expression.py", line 3, in ?
>>    from Martel import Re
>>  File "/usr/lib/python2.2/site-packages/Martel/__init__.py", line 6, in ?
>>    import Expression
>>  File "/usr/lib/python2.2/site-packages/Martel/Expression.py", line 31, 
>>in ?
>>    from xml.sax import xmlreader
>>ImportError: No module named xml.sax
>>    
>>
>
>Looks like the xml-packages are not installed. Pleas install the
>python-xml rpm from your installation-media and try again.
>
>HtH, Andreas
>
>  
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