[BioPython] problem with GenBank.NCBIDictionary ?

Cath Lawrence Cath.Lawrence@anu.edu.au
Fri, 31 May 2002 10:34:36 +1000


On Wednesday, May 29, 2002, at 02:25 AM, Catherine Letondal wrote:
> If I change the parser to be either the GenBank.RecordParser or the 
> GenBank.FeatureParser
> as shown in the tutorial, I get a Martel error message.
...
> Martel.Parser.ParserPositionException: error parsing at or beyond 
> character 55
> Could someone help?

Yup, I had this when I started with BioPython last month.

This is the LOCUS line change (it doesn't like seeing "linear").
Grab the latest version from CVS and it should be fine.

cheers
C
Cath Lawrence,                       Cath.Lawrence@anu.edu.au
Scientific Programmer,  Centre for Bioinformation Science,
John Curtin School of Medical Research
Australian National University,  Canberra ACT 0200
ph: Maths (02) 6125 2904;  JCSMR (02) 6125 0417;
mobile: 0421-902694   fax: (02) 61254712