[BioPython] BLAST GUI, presets requiered.

[Sebastian Bassi]

Hi,

I'm working in a BLAST GUI, made with PythonCard (it uses BioPython and 
wxPython). The NCBI BLAST for Windows is only command line (CL), so I'm 
making a GUI in Python.
I would like to include for "preset" tunning for BLAST searchs. One of 
them will be "default", and other could be "stringent" (to get only few 
relevants hits if all) and the other could be called "loosely" to get 
more hits.
The question is not technically a BioPython issue, but I think you could 
  tell me some parameters to use, like: Word size for a stringent 
search, E value and so on.
I would put 0.1 E value for a stringet seach and 10 for a loosely one. 
But what do you think about other parameters?

-- 
Best regards,

//=\ Sebastian Bassi - Diplomado en Ciencia y Tecnologia, UNQ   //=\
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