[Biopython-dev] [Biopython] Fwd: Bug in bgzf module

Peter Cock p.j.a.cock at googlemail.com
Thu Feb 7 11:53:40 UTC 2013


On Wed, Feb 6, 2013 at 10:35 PM, Petra Kubincová
<petra.kubincova at gmail.com> wrote:
> Hi Peter,
>
> based on your unit test for tell method I've created this:
> http://dl.dropbox.com/u/...
> I hope it's at least partially usable.
>
> Regards,
> Petra

Thanks, I turned that into this commit:
https://github.com/biopython/biopython/commit/194bda7cd4bc292b37fd219f1f95a19e1316ac5a

That lead me to notice a special case with offsets on a block
boundary, see this fix and test:
https://github.com/biopython/biopython/commit/fef7659dacaf93ddeb6270103d8ded6fb89414b7

Peter




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