[Biopython-dev] RNA secondary structure parsing
Kristian Rother
krother at rubor.de
Mon Mar 22 11:27:30 EDT 2010
Hi,
Took me a while to do some basic clean up in my code - finally managed to
contribute something.
I just added a branch 'rna' with basic RNA 2D format parsers (Vienna, CT,
BPSEQ), and a module that can extract 2D structure elements (helices,
loops, bulges, junctions).
http://github.com/krother/biopython/tree/rna
Its all in:
Bio.RNA
Tests.test_RNA_*
Any kind of feedback is welcome.
Best Regards,
Kristian
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