[Biopython-dev] sff file
biopython at maubp.freeserve.co.uk
Mon Oct 26 18:43:50 UTC 2009
On Mon, Oct 26, 2009 at 5:54 PM, Sebastian Bassi
<sbassi at clubdelarazon.org> wrote:
> I have 1.52 plus SffIO.py and __init__.py from your branch.
You'll also want to get Bio/SeqIO/_index.py if you want to
test random access to reads in an SFF file via the new
Bio.SeqIO.index() function. This will read the Roche style
SFF index if present (which is very fast) or just index the
file directly (which is still reasonably quick).
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