[Biopython-dev] [Bug 2950] Bio.PDBIO.save writes MODEL records without model id

bugzilla-daemon at portal.open-bio.org bugzilla-daemon at portal.open-bio.org
Tue Nov 17 13:22:47 UTC 2009


http://bugzilla.open-bio.org/show_bug.cgi?id=2950





------- Comment #3 from TallPaulInJax at yahoo.com  2009-11-17 08:22 EST -------
The offending lines of code are here in PDBIO:
http://github.com/biopython/biopython/blob/master/Bio/PDB/PDBIO.py#L129
            if model_flag:
                fp.write("MODEL \n")

For now, this should just be changed to:
            if model_flag:
                fp.write("MODEL %s\n" %model.id)

When the 'reported' model number ID is added, I believe model ID would best be
replaced with the new field above.

Paul


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