[Biopython-dev] Nexus issue on Windows with Python 2.3

Peter biopython at maubp.freeserve.co.uk
Fri Sep 5 23:19:13 UTC 2008


Can anyone using Windows and/or Python 2.3 try running the test suite?

I'm seeing a problem with test_SeqIO.py and test_AlignIO.py when they
call Bio.Nexus to construct a particular Nexus object (using seqences
originally read in from Tests/Nexus/test_Nexus_input.nex for what its
worth).  This triggers:

TypeError: zip() requires at least one sequence

On Linux with Python 2.4, and Mac OS X with Python 2.5 these two tests
both passed for me.

Peter



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