[Biopython-dev] [Bug 2677] BioSQL seqfeature enhancements

[bugzilla-daemon at portal.open-bio.org]

http://bugzilla.open-bio.org/show_bug.cgi?id=2677





------- Comment #7 from cymon.cox at gmail.com  2008-11-25 11:13 EST -------
(In reply to comment #6)
> (From update of attachment 1072 [details])
> I think this is still a big improvement, but that the
> (sub)feature.location_operator issue could wait.  We'll need to discuss on the
> BioSQL mailing list how this should be handled consistently.
> 
> Leaving this bug open.

Further to the "where to put the (sub)feature.location_operator" (eg. "join",
"order") question, this comment appears in the BioPerl MySQL schema for the
location_qualifier_value table:

-- location qualifiers - mainly intended for fuzzies but anything
-- can go in here
-- some controlled vocab terms have slots;

So, this would seem a suitable place to store the attribute.


-- 
Configure bugmail: http://bugzilla.open-bio.org/userprefs.cgi?tab=email
------- You are receiving this mail because: -------
You are the assignee for the bug, or are watching the assignee.