[Biopython-dev] [Bug 2227] Writing Nexus files with Bio.SeqIO

bugzilla-daemon at portal.open-bio.org bugzilla-daemon at portal.open-bio.org
Tue Jul 22 16:29:27 UTC 2008


http://bugzilla.open-bio.org/show_bug.cgi?id=2227





------- Comment #11 from biopython-bugzilla at maubp.freeserve.co.uk  2008-07-22 12:29 EST -------
Frank,

Would you mind if I removed this print statement from the add_sequence()
method?:

print "WARNING: Sequence name %s is already present. Sequence was added as %s."
% (name,unique_name)

I'd like to be able to call this method in code from Bio.SeqIO / Bio.AlignIO to
write alignments, without getting warnings printed out.

Thanks

Peter


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