[Biopython-dev] [Bug 2412] NCBIXML. fails parsing with blast 2.2.15 in special cases (Karlin-Altschul)

[bugzilla-daemon at portal.open-bio.org]

http://bugzilla.open-bio.org/show_bug.cgi?id=2412


biopython-bugzilla at maubp.freeserve.co.uk changed:

           What    |Removed                     |Added
----------------------------------------------------------------------------
             Status|NEW                         |RESOLVED
         Resolution|                            |WORKSFORME




------- Comment #5 from biopython-bugzilla at maubp.freeserve.co.uk  2007-12-09 14:03 EST -------
As per my comment 4, I think that in Biopython 1.44 we look for the special
case of an empty XML output file and raise a ValueError.  On Biopython 1.43 the
error was very unhelpful.

I'm marking this as "works for me".

Bjoern, please reopen this bug if there is still a problem using Biopython 1.44

Thanks, Peter.


-- 
Configure bugmail: http://bugzilla.open-bio.org/userprefs.cgi?tab=email
------- You are receiving this mail because: -------
You are the assignee for the bug, or are watching the assignee.