[Biopython-dev] Reading sequences: FormatIO, SeqIO, etc
mcolosimo at mitre.org
Thu Aug 17 12:08:24 UTC 2006
Nice quick work on that. For Clustal, I think it should NOT be an
Iterator, but there should be SequenceDict or SequenceList for it.
There are other alignment filetypes out there that could use a
SequenceIterator (those that are not interlaced). From looking over
your code, it seem like it would be easy to add a check in
File2SequenceDict/List to check for Clustal types and do something
On Aug 12, 2006, at 4:25 AM, Peter wrote:
> I've having a few issues with my email setup which is why I haven't
> replied recently.
> A week ago I filed bug 2059 for this discussion, and attached some
> I'm interested in your feedback - from the framework down to if you
> don't like the class names for example.
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