[Bioperl-pipeline] Notice on the modification on XMLImporter
Juguang XIAO
juguang at tll.org.sg
Mon May 10 08:50:47 EDT 2004
For biopipe developers only.
I move some logics in 930-line Bio::Pipeline::XMLImporter into
Bio::Pipeline::AbstractXMLImporter, which now is the parent module of
XMLImporter. The method moves are
1. accessor methods for qw(dbhost dbname dbuser dbpass schema xml dba)
2. _prepare_dba
3. _prepare_xso
After the XMLImporter module is slimed, I do the same on
XMLImporter::run methods to move some logic out into subroutine in
XMLImporter, such as _parse_global, _parse_rules, _parse_jobs.
Juguang
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