[Bioperl-pipeline] Using Solaris Gridware

[Shawn Hoon]

Hi Olly,
	I think some people have tried it out but I'm haven't heard anything
of that or seen any code. I personally haven't had the chance to look at it
as we don't have the GridEngine system to play with. I know the ensembl pipeline has a module for GridEngine 
and you are most welcome to port it over and test it out on your system. The port should not be
too difficult as in fact the LSF and PBS modules were really originally from the Ensembl modules with
minimal modifications and works great. In addition, the module just consist of one method submit_batch
that just constructs and runs the submission command line.

rgds,

shawn


On Thu, 16 Jan 2003, Oliver Burren wrote:

> Hi,
> 
> I'm looking to use biopipe in our lab however I see currently that there
> is only support for LSF and PBS. We use Sun Microsystems' Solaris Gridware
> (5.3p2), has anyone written a module that interfaces to this (i.e.
> Bio::Pipeline::BatchSubmission::Grid.pm) ? If not has anyone tried ? Any
> help would be greatfully received.
> 
> Best wishes,
> 
> Olly Burren
> -------------------------------------------------------------------------------
> JDRF/WT Diabetes and Inflammation Laboratory
> Cambridge Institute for Medical Research
> Addenbrooke's Hospital Site
> Hills Road,
> Cambridge
> CB2 2XY                         Tel. 01223 762598 Fax. 01223 762102
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> 
> 
> 
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* Shawn Hoon
* http://www.fugu-sg.org/~shawnh
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