[Bioperl-pipeline] make test errors

[shawnh@worf.fugu-sg.org]

Ah, Genwise tests were just committed ..prolly not too robust
yet..bad. \i will take a look
thanks!


shawn

On Fri, 6 Sep 2002, Wiepert, Mathieu wrote:

> Hi,
> 
> Just a note, the make test has a few errors for me, that I think are probably ok.  I don't have Genewise on my machine, so perhaps the tests should check and ignore?  Don't know what the Job tests are yet...
> 
> t/Genewise...........Can't locate Bio/Tools/Run/Genewise.pm in @INC (@INC contains: blib/arch blib/lib /usr/lib/perl5/5.6.1/i386-linux /usr/lib/perl5/5.6.1/i386-linux /usr/lib/perl5/5.6.1/i386-linux /usr/lib/perl5/5.6.1 /usr/lib/perl5/5.6.1/i386-linux /usr/lib/perl5/5.6.1/i386-linux /usr/lib/perl5/5.6.1 /usr/lib/perl5/site_perl/5.6.1/i386-linux /usr/lib/perl5/site_perl/5.6.1/i386-linux /usr/lib/perl5/site_perl/5.6.1 /usr/lib/perl5/site_perl/5.6.0 /usr/lib/perl5/site_perl/5.6.1/i386-linux /usr/lib/perl5/site_perl/5.6.1 /usr/lib/perl5/site_perl/5.6.0 /usr/lib/perl5/site_perl /usr/lib/perl5/vendor_perl/5.6.1/i386-linux /usr/lib/perl5/vendor_perl/5.6.1/i386-linux /usr/lib/perl5/vendor_perl/5.6.1 /usr/lib/perl5/vendor_perl/5.6.1/i386-linux /usr/lib/perl5/vendor_perl/5.6.1 /usr/lib/perl5/vendor_perl . /usr/lib/perl5/5.6.1/i386-linux /usr/lib/perl5/5.6.1 /usr/lib/perl5/site_perl/5.6.1/i386-linux /usr/lib/perl5/site_perl/5.6.1 /usr/lib/perl5/site_perl/5.6.0 /usr/lib/perl5/site_per!
l !
> /usr/lib/perl5/vendor_perl/5.6.1/i386-linux /usr/lib/perl5/vendor_perl/5.6.1 /usr/lib/perl5/vendor_perl .) at blib/lib/Bio/Pipeline/Runnable/Genewise.pm line 62.
> BEGIN failed--compilation aborted at blib/lib/Bio/Pipeline/Runnable/Genewise.pm line 62.
> Compilation failed in require at t/Genewise.t line 7.
> BEGIN failed--compilation aborted at t/Genewise.t line 7.
> t/Genewise...........dubious
>         Test returned status 2 (wstat 512, 0x200)
> t/Genscan............Genscan program not found. Skipping tests 1 to 2.
> t/Genscan............ok
> t/Input..............ok
> t/Job................FAILED tests 11-12
>         Failed 2/13 tests, 84.62% okay
> 
> 
> -Mat
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-- 
********************************
* Shawn Hoon
* http://www.fugu-sg.org/~shawnh
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