[Bioperl-pipeline] Re: pipeline test
shawnh@fugu-sg.org
shawnh@fugu-sg.org
Sun, 22 Dec 2002 10:27:07 +0800 (SGT)
run it in the root directory.
go to:
cd bioperl-pipeline
your path should be /usr/users/luoming/cvs_src/bioperl-pipeline
then run
perl t/BlastPipe.t
this is because the path sql/schema.sql assumes your current working dir is there.
This path is set in t/BiopipeTestDB.conf
shawn
On 20 Dec 2002, Luo Ming wrote:
> > You can run it by perl t/BlastPipe.t to see the output or
>
> pulse1 ~/cvs_src/bioperl-pipeline/t> perl ./BlastPipe.t
> 1..11
> Can't read SQL file 'sql/schema.sql' : No such file or directory at
> BiopipeTestDB.pm line 303.
>
>
> Did I miss something in my path?
>
> Luo Ming
>
> _______________________________________________
> bioperl-pipeline mailing list
> bioperl-pipeline@bioperl.org
> http://bioperl.org/mailman/listinfo/bioperl-pipeline
>
--
********************************
* Shawn Hoon
* http://www.fugu-sg.org/~shawnh
********************************