BLASTP 2.2.18 [Mar-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= test (259 letters) Database: agris_pep 1749 sequences; 645,545 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value At1g01030 | ABI3VP1 199 6e-53 At2g46870 | RAV 197 3e-52 At3g61970 | RAV 189 7e-50 At4g01500 | RAV 170 5e-44 At5g06250 | RAV 161 2e-41 At2g36080 | RAV 158 1e-40 At3g11580 | RAV 156 9e-40 At1g68840 | RAV 154 3e-39 At1g13260 | RAV 153 5e-39 At1g25560 | ABI3VP1 151 3e-38 At3g25730 | RAV 149 1e-37 At1g50680 | RAV 102 1e-23 At1g51120 | RAV 97 7e-22 At4g32010 | ABI3VP1 74 5e-15 At2g30470 | ABI3VP1 73 1e-14 At4g21550 | ABI3VP1 67 7e-13 At2g33860 | ARF 64 7e-12 At1g35240 | ARF 64 8e-12 At1g77850 | ARF 63 1e-11 At5g60450 | ARF 62 2e-11 At4g23980 | ARF 62 2e-11 At2g28350 | ARF 62 3e-11 At1g35520 | ARF 61 3e-11 At1g34310 | ARF 61 4e-11 At4g30080 | ARF 61 5e-11 At1g19850 | ARF 59 1e-10 At5g37020 | ARF 59 3e-10 At1g35540 | ARF 58 3e-10 At1g34410 | ARF 58 3e-10 At1g34170 | ARF 57 5e-10 At1g34390 | ARF 57 5e-10 At3g61830 | ARF 57 5e-10 At1g19220 | ARF 57 6e-10 At1g30330 | ARF 57 7e-10 At5g20730 | ARF 57 8e-10 At3g24650 | ABI3VP1 55 2e-09 At2g46530 | ARF 54 6e-09 At5g62000 | ARF 54 6e-09 At1g59750 | ARF 54 8e-09 At3g26790 | ABI3VP1 50 6e-08 At1g43950 | ARF 50 8e-08 At1g28300 | ABI3VP1 49 1e-07 >At1g01030 | ABI3VP1 Length = 358 Score = 199 bits (507), Expect = 6e-53, Method: Compositional matrix adjust. Identities = 94/121 (77%), Positives = 105/121 (86%), Gaps = 2/121 (1%) Query: 35 EKEHMFDKVVTPSDVGKLNRLVIPKQHAEKYFPLDAAANEKGLLLSFEDRTGKPWRFRYS 94 EKEHMFDKVVTPSDVGKLNRLVIPKQHAE+YFPLD++ N+ G LL+F+DR GK WRFRYS Sbjct: 51 EKEHMFDKVVTPSDVGKLNRLVIPKQHAERYFPLDSSNNQNGTLLNFQDRNGKMWRFRYS 110 Query: 95 YWNSSQSYVMTKGWSRFVKEKRLDAGDTVSFGRGIS-EAARDRLFIDWRCRPDPPVVH-H 152 YWNSSQSYVMTKGWSRFVKEK+LDAGD VSF RGI E+ R +L+IDWR RPD +V H Sbjct: 111 YWNSSQSYVMTKGWSRFVKEKKLDAGDIVSFQRGIGDESERSKLYIDWRHRPDMSLVQAH 170 Query: 153 Q 153 Q Sbjct: 171 Q 171 >At2g46870 | RAV Length = 310 Score = 197 bits (501), Expect = 3e-52, Method: Compositional matrix adjust. Identities = 91/117 (77%), Positives = 104/117 (88%), Gaps = 1/117 (0%) Query: 33 TVEKEHMFDKVVTPSDVGKLNRLVIPKQHAEKYFPLDAAANEKGLLLSFEDRTGKPWRFR 92 ++EHMFDKVVTPSDVGKLNRLVIPKQHAE++FPLD+++NEKGLLL+FED TGK WRFR Sbjct: 28 VADREHMFDKVVTPSDVGKLNRLVIPKQHAERFFPLDSSSNEKGLLLNFEDLTGKSWRFR 87 Query: 93 YSYWNSSQSYVMTKGWSRFVKEKRLDAGDTVSFGRGISEAARD-RLFIDWRCRPDPP 148 YSYWNSSQSYVMTKGWSRFVK+K+LDAGD VSF R + ++ RD RLFIDWR RP P Sbjct: 88 YSYWNSSQSYVMTKGWSRFVKDKKLDAGDIVSFQRCVGDSGRDSRLFIDWRRRPKVP 144 >At3g61970 | RAV Length = 299 Score = 189 bits (481), Expect = 7e-50, Method: Compositional matrix adjust. Identities = 90/124 (72%), Positives = 103/124 (83%), Gaps = 5/124 (4%) Query: 33 TVEKEHMFDKVVTPSDVGKLNRLVIPKQHAEKYFPLDAAA---NEKGLLLSFEDRTGKPW 89 ++E+EHMFDKVVTPSDVGKLNRLVIPKQHAE+YFPLD + + KGLLL+FEDR+G W Sbjct: 16 SMEREHMFDKVVTPSDVGKLNRLVIPKQHAERYFPLDNSTTNDSNKGLLLNFEDRSGNSW 75 Query: 90 RFRYSYWNSSQSYVMTKGWSRFVKEKRLDAGDTVSFGRGISEAARDRLFIDWRCRPDPPV 149 RFRYSYWNSSQSYVMTKGWSRFVK+K+LDAGD VSF R +D+L+IDWR RP P Sbjct: 76 RFRYSYWNSSQSYVMTKGWSRFVKDKKLDAGDIVSFQR--DSCNKDKLYIDWRRRPKIPD 133 Query: 150 VHHQ 153 HHQ Sbjct: 134 HHHQ 137 >At4g01500 | RAV Length = 328 Score = 170 bits (430), Expect = 5e-44, Method: Compositional matrix adjust. Identities = 85/134 (63%), Positives = 98/134 (73%), Gaps = 9/134 (6%) Query: 36 KEHMFDKVVTPSDVGKLNRLVIPKQHAEKYFPLDAAANEKGLLLSFEDRTGKPWRFRYSY 95 +EHMFDKV+TPSDVGKLNRLVIPKQHAE +FPL+ N+ G +L F+D+ GK WRFRYSY Sbjct: 27 REHMFDKVLTPSDVGKLNRLVIPKQHAENFFPLED--NQNGTVLDFQDKNGKMWRFRYSY 84 Query: 96 WNSSQSYVMTKGWSRFVKEKRLDAGDTVSFGRGIS-------EAARDRLFIDWRCRPDPP 148 WNSSQSYVMTKGWSRFVKEK+L AGDTVSF RG E R +FIDWR R + Sbjct: 85 WNSSQSYVMTKGWSRFVKEKKLFAGDTVSFYRGYIPDDNAQPERRRKIMFIDWRPRAEIN 144 Query: 149 VVHHQYHHRLPLPS 162 VH+ +H S Sbjct: 145 FVHNINNHNFVFGS 158 >At5g06250 | RAV Length = 282 Score = 161 bits (407), Expect = 2e-41, Method: Compositional matrix adjust. Identities = 80/119 (67%), Positives = 93/119 (78%), Gaps = 12/119 (10%) Query: 36 KEHMFDKVVTPSDVGKLNRLVIPKQHAEKYFPLDAA----------ANEKGLLLSFEDRT 85 KE +F+K +TPSDVGKLNRLVIPKQHAEKYFPL+A ++EKG+LLSFED + Sbjct: 42 KESLFEKSLTPSDVGKLNRLVIPKQHAEKYFPLNAVLVSSAAADTSSSEKGMLLSFEDES 101 Query: 86 GKPWRFRYSYWNSSQSYVMTKGWSRFVKEKRLDAGDTVSFGRGISEAARDRLFIDWRCR 144 GK WRFRYSYWNSSQSYV+TKGWSRFVK+K+LD GD V F R S++ RLFI WR R Sbjct: 102 GKSWRFRYSYWNSSQSYVLTKGWSRFVKDKQLDPGDVVFFQRHRSDSR--RLFIGWRRR 158 >At2g36080 | RAV Length = 244 Score = 158 bits (400), Expect = 1e-40, Method: Compositional matrix adjust. Identities = 86/125 (68%), Positives = 93/125 (74%), Gaps = 5/125 (4%) Query: 35 EKEHMFDKVVTPSDVGKLNRLVIPKQHAEKYFPLDAAAN---EKGLLLSFEDRTGKPWRF 91 EKE +F+K +TPSDVGKLNRLVIPKQHAE+YFPL AAA EKGLLL FED GKPWRF Sbjct: 33 EKEALFEKPLTPSDVGKLNRLVIPKQHAERYFPLAAAAADAVEKGLLLCFEDEEGKPWRF 92 Query: 92 RYSYWNSSQSYVMTKGWSRFVKEKRLDAGDTVSFGRGISEAARDRLFIDWRCRPDPPVVH 151 RYSYWNSSQSYV+TKGWSR+VKEK LDAGD V F R S+ R FI WR R D Sbjct: 93 RYSYWNSSQSYVLTKGWSRYVKEKHLDAGDVVLFHRHRSDGG--RFFIGWRRRGDSSSSS 150 Query: 152 HQYHH 156 Y H Sbjct: 151 DSYRH 155 >At3g11580 | RAV Length = 267 Score = 156 bits (394), Expect = 9e-40, Method: Compositional matrix adjust. Identities = 78/123 (63%), Positives = 90/123 (73%), Gaps = 13/123 (10%) Query: 35 EKEHMFDKVVTPSDVGKLNRLVIPKQHAEKYFPL-----------DAAANEKGLLLSFED 83 ++E +F+K +TPSDVGKLNRLVIPKQHAEKYFPL D A EKG+LLSFED Sbjct: 24 QRESLFEKSLTPSDVGKLNRLVIPKQHAEKYFPLNNNNNNGGSGDDVATTEKGMLLSFED 83 Query: 84 RTGKPWRFRYSYWNSSQSYVMTKGWSRFVKEKRLDAGDTVSFGRGISEAARDRLFIDWRC 143 +GK W+FRYSYWNSSQSYV+TKGWSR+VK+K LDAGD V F R RLFI WR Sbjct: 84 ESGKCWKFRYSYWNSSQSYVLTKGWSRYVKDKHLDAGDVVFFQR--HRFDLHRLFIGWRR 141 Query: 144 RPD 146 R + Sbjct: 142 RGE 144 >At1g68840 | RAV Length = 352 Score = 154 bits (389), Expect = 3e-39, Method: Compositional matrix adjust. Identities = 76/114 (66%), Positives = 89/114 (78%), Gaps = 4/114 (3%) Query: 36 KEHMFDKVVTPSDVGKLNRLVIPKQHAEKYFPLDAA--ANEKGLLLSFEDRTGKPWRFRY 93 +E +F+K VTPSDVGKLNRLVIPKQHAEK+FPL + A KG+L++FED GK WRFRY Sbjct: 184 REVLFEKAVTPSDVGKLNRLVIPKQHAEKHFPLPSPSPAVTKGVLINFEDVNGKVWRFRY 243 Query: 94 SYWNSSQSYVMTKGWSRFVKEKRLDAGDTVSFGRGISEAARDRLFIDWRCRPDP 147 SYWNSSQSYV+TKGWSRFVKEK L AGD V+F R S +L+IDW+ R P Sbjct: 244 SYWNSSQSYVLTKGWSRFVKEKNLRAGDVVTFER--STGLERQLYIDWKVRSGP 295 >At1g13260 | RAV Length = 344 Score = 153 bits (387), Expect = 5e-39, Method: Compositional matrix adjust. Identities = 74/109 (67%), Positives = 85/109 (77%), Gaps = 3/109 (2%) Query: 37 EHMFDKVVTPSDVGKLNRLVIPKQHAEKYFPL-DAAANEKGLLLSFEDRTGKPWRFRYSY 95 E +F+K VTPSDVGKLNRLVIPK HAEK+FPL + + KG+LL+FED GK WRFRYSY Sbjct: 185 EALFEKAVTPSDVGKLNRLVIPKHHAEKHFPLPSSNVSVKGVLLNFEDVNGKVWRFRYSY 244 Query: 96 WNSSQSYVMTKGWSRFVKEKRLDAGDTVSFGRGISEAARDRLFIDWRCR 144 WNSSQSYV+TKGWSRFVKEK L AGD VSF R S +L+I W+ R Sbjct: 245 WNSSQSYVLTKGWSRFVKEKNLRAGDVVSFSR--SNGQDQQLYIGWKSR 291 >At1g25560 | ABI3VP1 Length = 361 Score = 151 bits (381), Expect = 3e-38, Method: Compositional matrix adjust. Identities = 76/120 (63%), Positives = 87/120 (72%), Gaps = 10/120 (8%) Query: 36 KEHMFDKVVTPSDVGKLNRLVIPKQHAEKYFPLDAAANE--------KGLLLSFEDRTGK 87 +E +F+K VTPSDVGKLNRLVIPKQHAEK+FPL A KG+L++ EDRTGK Sbjct: 191 REVLFEKTVTPSDVGKLNRLVIPKQHAEKHFPLPAMTTAMGMNPSPTKGVLINLEDRTGK 250 Query: 88 PWRFRYSYWNSSQSYVMTKGWSRFVKEKRLDAGDTVSFGRGISEAARDRLFIDWRCRPDP 147 WRFRYSYWNSSQSYV+TKGWSRFVKEK L AGD V F R S +L+I W+ R P Sbjct: 251 VWRFRYSYWNSSQSYVLTKGWSRFVKEKNLRAGDVVCFER--STGPDRQLYIHWKVRSSP 308 >At3g25730 | RAV Length = 333 Score = 149 bits (375), Expect = 1e-37, Method: Compositional matrix adjust. Identities = 73/111 (65%), Positives = 83/111 (74%), Gaps = 5/111 (4%) Query: 37 EHMFDKVVTPSDVGKLNRLVIPKQHAEKYFPLDAAANE---KGLLLSFEDRTGKPWRFRY 93 E +F+K VTPSDVGKLNRLVIPK AEK+FPL N KG+LL+FED GK WRFRY Sbjct: 180 ELLFEKTVTPSDVGKLNRLVIPKHQAEKHFPLPLGNNNVSVKGMLLNFEDVNGKVWRFRY 239 Query: 94 SYWNSSQSYVMTKGWSRFVKEKRLDAGDTVSFGRGISEAARDRLFIDWRCR 144 SYWNSSQSYV+TKGWSRFVKEKRL AGD +SF R S + FI W+ + Sbjct: 240 SYWNSSQSYVLTKGWSRFVKEKRLCAGDLISFKR--SNDQDQKFFIGWKSK 288 >At1g50680 | RAV Length = 337 Score = 102 bits (255), Expect = 1e-23, Method: Compositional matrix adjust. Identities = 55/132 (41%), Positives = 74/132 (56%), Gaps = 19/132 (14%) Query: 38 HMFDKVVTPSDVGKLNRLVIPKQHAEKYFPL---DAAANEKGLLLS--------FEDRTG 86 +F K +TPSDVGKLNRLVIPK++A KY P D + E+G ++ F DR Sbjct: 155 QLFQKELTPSDVGKLNRLVIPKKYAVKYMPFISADQSEKEEGEIVGSVEDVEVVFYDRAM 214 Query: 87 KPWRFRYSYWNSSQSYVMTKGWSRFVKEKRLDAGDTVSFG--------RGISEAARDRLF 138 + W+FRY YW SSQS+V T+GW+ FVKEK L D ++F + + ++ L Sbjct: 215 RQWKFRYCYWKSSQSFVFTRGWNSFVKEKNLKEKDVIAFYTCDVPNNVKTLEGQRKNFLM 274 Query: 139 IDWRCRPDPPVV 150 ID C D V Sbjct: 275 IDVHCFSDNGSV 286 >At1g51120 | RAV Length = 352 Score = 96.7 bits (239), Expect = 7e-22, Method: Compositional matrix adjust. Identities = 48/96 (50%), Positives = 62/96 (64%), Gaps = 8/96 (8%) Query: 38 HMFDKVVTPSDVGKLNRLVIPKQHAEKYFPL---DAAANE-----KGLLLSFEDRTGKPW 89 +F K +TPSDVGKLNRLVIPK++A KY P D + E + + + F DR + W Sbjct: 176 QLFQKELTPSDVGKLNRLVIPKKYAVKYMPFISDDQSEKETSEGVEDVEVVFYDRAMRQW 235 Query: 90 RFRYSYWNSSQSYVMTKGWSRFVKEKRLDAGDTVSF 125 +FRY YW SSQS+V T+GW+ FVKEK L D + F Sbjct: 236 KFRYCYWRSSQSFVFTRGWNGFVKEKNLKEKDIIVF 271 >At4g32010 | ABI3VP1 Length = 780 Score = 73.9 bits (180), Expect = 5e-15, Method: Compositional matrix adjust. Identities = 38/91 (41%), Positives = 60/91 (65%), Gaps = 5/91 (5%) Query: 39 MFDKVVTPSDVGKLNRLVIPKQHAEKYFPLDAAANEKGLLLSFEDRTGKPWRFRYSYW-- 96 +F+KV++ SD G++ RLV+PK AE YFP + +GL L +D GK W F++ +W Sbjct: 285 LFEKVLSASDAGRIGRLVLPKACAEAYFP--PISLPEGLPLKIQDIKGKEWVFQFRFWPN 342 Query: 97 NSSQSYVMTKGWSRFVKEKRLDAGDTVSFGR 127 N+S+ YV+ +G + ++ +L AGDTV+F R Sbjct: 343 NNSRMYVL-EGVTPCIQSMQLQAGDTVTFSR 372 >At2g30470 | ABI3VP1 Length = 790 Score = 72.8 bits (177), Expect = 1e-14, Method: Compositional matrix adjust. Identities = 36/91 (39%), Positives = 58/91 (63%), Gaps = 5/91 (5%) Query: 39 MFDKVVTPSDVGKLNRLVIPKQHAEKYFPLDAAANEKGLLLSFEDRTGKPWRFRYSYW-- 96 +F+K ++ SD G++ RLV+PK AE YFP + +G+ L +D G+ W F++ YW Sbjct: 294 LFEKTLSASDAGRIGRLVLPKACAEAYFP--PISQSEGIPLKIQDVRGREWTFQFRYWPN 351 Query: 97 NSSQSYVMTKGWSRFVKEKRLDAGDTVSFGR 127 N+S+ YV+ +G + ++ L AGDTV+F R Sbjct: 352 NNSRMYVL-EGVTPCIQSMMLQAGDTVTFSR 381 >At4g21550 | ABI3VP1 Length = 721 Score = 67.0 bits (162), Expect = 7e-13, Method: Compositional matrix adjust. Identities = 36/88 (40%), Positives = 59/88 (67%), Gaps = 7/88 (7%) Query: 42 KVVTPSDVGKLNRLVIPKQHAEKYFPLDAAANEKGLLLSFEDRTGKPWRFRYSYWNSSQS 101 K+++ +D GK RLV+PK++AE + P ++ KG+ L+ +D GK WRF++ +W SS+ Sbjct: 305 KILSATDTGK--RLVLPKKYAEAFLP--QLSHTKGVPLTVQDPMGKEWRFQFRFWPSSKG 360 Query: 102 --YVMTKGWSRFVKEKRLDAGDTVSFGR 127 YV+ +G + F++ +L AGDTV F R Sbjct: 361 RIYVL-EGVTPFIQTLQLQAGDTVIFSR 387 >At2g33860 | ARF Length = 608 Score = 63.5 bits (153), Expect = 7e-12, Method: Compositional matrix adjust. Identities = 36/92 (39%), Positives = 49/92 (53%), Gaps = 1/92 (1%) Query: 38 HMFDKVVTPSDVGKLNRLVIPKQHAEKYFP-LDAAANEKGLLLSFEDRTGKPWRFRYSYW 96 HMF K +T SD +P++ AE FP LD + L D G WRFR+ Y Sbjct: 157 HMFCKTLTASDTSTHGGFSVPRRAAEDCFPPLDYSQPRPSQELLARDLHGLEWRFRHIYR 216 Query: 97 NSSQSYVMTKGWSRFVKEKRLDAGDTVSFGRG 128 + +++T GWS FV +K+L +GD V F RG Sbjct: 217 GQPRRHLLTTGWSAFVNKKKLVSGDAVLFLRG 248 >At1g35240 | ARF Length = 615 Score = 63.5 bits (153), Expect = 8e-12, Method: Compositional matrix adjust. Identities = 34/90 (37%), Positives = 47/90 (52%), Gaps = 1/90 (1%) Query: 40 FDKVVTPSDVGKLNRLVIPKQHAEKYFP-LDAAANEKGLLLSFEDRTGKPWRFRYSYWNS 98 F KV+T SD +PK+HA + P LD + L +D G WRFR+SY + Sbjct: 126 FTKVLTASDTSAYGGFFVPKKHAIECLPPLDMSQPLPAQELLAKDLHGNQWRFRHSYRGT 185 Query: 99 SQSYVMTKGWSRFVKEKRLDAGDTVSFGRG 128 Q + +T GW+ F K+L GD + F RG Sbjct: 186 PQRHSLTTGWNEFTTSKKLVKGDVIVFVRG 215 >At1g77850 | ARF Length = 585 Score = 62.8 bits (151), Expect = 1e-11, Method: Compositional matrix adjust. Identities = 38/112 (33%), Positives = 56/112 (50%), Gaps = 5/112 (4%) Query: 35 EKEHMFDKVVTPSDVGKLNRLVIPKQHAEKYFPL-DAAANEKGLLLSFEDRTGKPWRFRY 93 K F K++TPSD +P+ A+ FPL + + L D G W FR+ Sbjct: 114 NKVTTFAKILTPSDANNGGGFSVPRFCADSVFPLLNFQIDPPVQKLYVTDIHGAVWDFRH 173 Query: 94 SYWNSSQSYVMTKGWSRFVKEKRLDAGDTVSFGRGISEAARDRLFIDWRCRP 145 Y + + +++T GWS+FV K+L AGD+V F R + D +FI R P Sbjct: 174 IYRGTPRRHLLTTGWSKFVNSKKLIAGDSVVFMR----KSADEMFIGVRRTP 221 >At5g60450 | ARF Length = 788 Score = 62.4 bits (150), Expect = 2e-11, Method: Compositional matrix adjust. Identities = 40/109 (36%), Positives = 53/109 (48%), Gaps = 3/109 (2%) Query: 38 HMFDKVVTPSDVGKLNRLVIPKQHAEKYF-PLDAAANEKGLLLSFEDRTGKPWRFRYSYW 96 HMF K +T SD +P++ AE F PLD L +D G W+FR+ Y Sbjct: 175 HMFCKTLTASDTSTHGGFSVPRRAAEDCFAPLDYKQQRPSQELIAKDLHGVEWKFRHIYR 234 Query: 97 NSSQSYVMTKGWSRFVKEKRLDAGDTVSFGRGISEAARDRLFIDWRCRP 145 + +++T GWS FV +K L +GD V F R E RL I RP Sbjct: 235 GQPRRHLLTTGWSIFVSQKNLVSGDAVLFLR--DEGGELRLGIRRAARP 281 >At4g23980 | ARF Length = 638 Score = 61.6 bits (148), Expect = 2e-11, Method: Compositional matrix adjust. Identities = 35/94 (37%), Positives = 48/94 (51%), Gaps = 1/94 (1%) Query: 36 KEHMFDKVVTPSDVGKLNRLVIPKQHAEKYFP-LDAAANEKGLLLSFEDRTGKPWRFRYS 94 K H F KV+T SD + ++HA + P LD L ED G W+F++ Sbjct: 112 KVHSFSKVLTASDTSTHGGFSVLRKHATECLPPLDMTQQTPTQELVAEDVHGYQWKFKHI 171 Query: 95 YWNSSQSYVMTKGWSRFVKEKRLDAGDTVSFGRG 128 + + +++T GWS FV KRL AGDT F RG Sbjct: 172 FRGQPRRHLLTTGWSTFVTSKRLVAGDTFVFLRG 205 >At2g28350 | ARF Length = 693 Score = 61.6 bits (148), Expect = 3e-11, Method: Compositional matrix adjust. Identities = 34/94 (36%), Positives = 52/94 (55%), Gaps = 1/94 (1%) Query: 35 EKEHMFDKVVTPSDVGKLNRLVIPKQHAEKYFP-LDAAANEKGLLLSFEDRTGKPWRFRY 93 EK F K +T SD +P+ AE FP LD +A + +D G+ W+FR+ Sbjct: 110 EKPASFAKTLTQSDANNGGGFSVPRYCAETIFPRLDYSAEPPVQTVIAKDIHGETWKFRH 169 Query: 94 SYWNSSQSYVMTKGWSRFVKEKRLDAGDTVSFGR 127 Y + + +++T GWS FV +K+L AGD++ F R Sbjct: 170 IYRGTPRRHLLTTGWSTFVNQKKLIAGDSIVFLR 203 >At1g35520 | ARF Length = 598 Score = 61.2 bits (147), Expect = 3e-11, Method: Compositional matrix adjust. Identities = 33/90 (36%), Positives = 47/90 (52%), Gaps = 1/90 (1%) Query: 40 FDKVVTPSDVGKLNRLVIPKQHAEKYFP-LDAAANEKGLLLSFEDRTGKPWRFRYSYWNS 98 F KV+T SD+ +PK+HA + P LD + L D G W FR+SY + Sbjct: 131 FTKVLTASDISANGVFSVPKKHAIECLPPLDMSQPLPAQELLAIDLHGNQWSFRHSYRGT 190 Query: 99 SQSYVMTKGWSRFVKEKRLDAGDTVSFGRG 128 Q +++T GW+ F K+L GD + F RG Sbjct: 191 PQRHLLTTGWNEFTTSKKLVKGDVIVFVRG 220 >At1g34310 | ARF Length = 593 Score = 61.2 bits (147), Expect = 4e-11, Method: Compositional matrix adjust. Identities = 33/90 (36%), Positives = 47/90 (52%), Gaps = 1/90 (1%) Query: 40 FDKVVTPSDVGKLNRLVIPKQHAEKYFP-LDAAANEKGLLLSFEDRTGKPWRFRYSYWNS 98 F KV+T SD +PK+HA + P LD + L D G WRF ++Y + Sbjct: 126 FTKVLTASDTSAHGGFFVPKKHAIECLPSLDMSQPLPAQELLAIDLHGNQWRFNHNYRGT 185 Query: 99 SQSYVMTKGWSRFVKEKRLDAGDTVSFGRG 128 Q +++T GW+ F K+L AGD + F RG Sbjct: 186 PQRHLLTTGWNAFTTSKKLVAGDVIVFVRG 215 >At4g30080 | ARF Length = 670 Score = 60.8 bits (146), Expect = 5e-11, Method: Compositional matrix adjust. Identities = 34/94 (36%), Positives = 50/94 (53%), Gaps = 1/94 (1%) Query: 35 EKEHMFDKVVTPSDVGKLNRLVIPKQHAEKYFP-LDAAANEKGLLLSFEDRTGKPWRFRY 93 EK F K +T SD +P+ AE FP LD A + +D G W+FR+ Sbjct: 115 EKTPSFAKTLTQSDANNGGGFSVPRYCAETIFPRLDYNAEPPVQTILAKDVHGDVWKFRH 174 Query: 94 SYWNSSQSYVMTKGWSRFVKEKRLDAGDTVSFGR 127 Y + + +++T GWS FV +K+L AGD++ F R Sbjct: 175 IYRGTPRRHLLTTGWSNFVNQKKLVAGDSIVFMR 208 Score = 60.8 bits (146), Expect = 5e-11, Method: Compositional matrix adjust. Identities = 34/94 (36%), Positives = 50/94 (53%), Gaps = 1/94 (1%) Query: 35 EKEHMFDKVVTPSDVGKLNRLVIPKQHAEKYFP-LDAAANEKGLLLSFEDRTGKPWRFRY 93 EK F K +T SD +P+ AE FP LD A + +D G W+FR+ Sbjct: 115 EKTPSFAKTLTQSDANNGGGFSVPRYCAETIFPRLDYNAEPPVQTILAKDVHGDVWKFRH 174 Query: 94 SYWNSSQSYVMTKGWSRFVKEKRLDAGDTVSFGR 127 Y + + +++T GWS FV +K+L AGD++ F R Sbjct: 175 IYRGTPRRHLLTTGWSNFVNQKKLVAGDSIVFMR 208 Score = 60.8 bits (146), Expect = 5e-11, Method: Compositional matrix adjust. Identities = 34/94 (36%), Positives = 50/94 (53%), Gaps = 1/94 (1%) Query: 35 EKEHMFDKVVTPSDVGKLNRLVIPKQHAEKYFP-LDAAANEKGLLLSFEDRTGKPWRFRY 93 EK F K +T SD +P+ AE FP LD A + +D G W+FR+ Sbjct: 115 EKTPSFAKTLTQSDANNGGGFSVPRYCAETIFPRLDYNAEPPVQTILAKDVHGDVWKFRH 174 Query: 94 SYWNSSQSYVMTKGWSRFVKEKRLDAGDTVSFGR 127 Y + + +++T GWS FV +K+L AGD++ F R Sbjct: 175 IYRGTPRRHLLTTGWSNFVNQKKLVAGDSIVFMR 208 Score = 60.8 bits (146), Expect = 5e-11, Method: Compositional matrix adjust. Identities = 34/94 (36%), Positives = 50/94 (53%), Gaps = 1/94 (1%) Query: 35 EKEHMFDKVVTPSDVGKLNRLVIPKQHAEKYFP-LDAAANEKGLLLSFEDRTGKPWRFRY 93 EK F K +T SD +P+ AE FP LD A + +D G W+FR+ Sbjct: 115 EKTPSFAKTLTQSDANNGGGFSVPRYCAETIFPRLDYNAEPPVQTILAKDVHGDVWKFRH 174 Query: 94 SYWNSSQSYVMTKGWSRFVKEKRLDAGDTVSFGR 127 Y + + +++T GWS FV +K+L AGD++ F R Sbjct: 175 IYRGTPRRHLLTTGWSNFVNQKKLVAGDSIVFMR 208 >At1g19850 | ARF Length = 902 Score = 59.3 bits (142), Expect = 1e-10, Method: Compositional matrix adjust. Identities = 35/91 (38%), Positives = 46/91 (50%), Gaps = 1/91 (1%) Query: 38 HMFDKVVTPSDVGKLNRLVIPKQHAEKYFP-LDAAANEKGLLLSFEDRTGKPWRFRYSYW 96 F K +T SD +P++ AEK FP LD +A L D W FR+ Y Sbjct: 156 EFFCKTLTASDTSTHGGFSVPRRAAEKLFPPLDYSAQPPTQELVVRDLHENTWTFRHIYR 215 Query: 97 NSSQSYVMTKGWSRFVKEKRLDAGDTVSFGR 127 + +++T GWS FV KRL AGD+V F R Sbjct: 216 GQPKRHLLTTGWSLFVGSKRLRAGDSVLFIR 246 >At5g37020 | ARF Length = 811 Score = 58.5 bits (140), Expect = 3e-10, Method: Compositional matrix adjust. Identities = 37/112 (33%), Positives = 54/112 (48%), Gaps = 5/112 (4%) Query: 40 FDKVVTPSDVGKLNRLVIPKQHAEKYFP-LDAAANEKGLLLSFEDRTGKPWRFRYSYWNS 98 F K +T SD +P++ AEK FP LD L D W+FR+ + Sbjct: 126 FCKTLTASDTSTHGGFSVPRRAAEKVFPPLDYTLQPPAQELIARDLHDVEWKFRHIFRGQ 185 Query: 99 SQSYVMTKGWSRFVKEKRLDAGDTVSFGRGISEAARDRLFIDWRCRPDPPVV 150 + +++T GWS FV KRL AGD+V F R +++LF+ R P + Sbjct: 186 PKRHLLTTGWSVFVSAKRLVAGDSVIFIRN----EKNQLFLGIRHATRPQTI 233 >At1g35540 | ARF Length = 605 Score = 58.2 bits (139), Expect = 3e-10, Method: Compositional matrix adjust. Identities = 32/90 (35%), Positives = 47/90 (52%), Gaps = 1/90 (1%) Query: 40 FDKVVTPSDVGKLNRLVIPKQHAEKYFP-LDAAANEKGLLLSFEDRTGKPWRFRYSYWNS 98 F KV+T SD +PK+HA + P LD + + D G WRFR+ Y + Sbjct: 126 FTKVLTASDTSVHGGFSVPKKHAIECLPPLDMSQPLPTQEILAIDLHGNQWRFRHIYRGT 185 Query: 99 SQSYVMTKGWSRFVKEKRLDAGDTVSFGRG 128 +Q +++T GW+ F K+L GD + F RG Sbjct: 186 AQRHLLTIGWNAFTTSKKLVEGDVIVFVRG 215 >At1g34410 | ARF Length = 606 Score = 58.2 bits (139), Expect = 3e-10, Method: Compositional matrix adjust. Identities = 31/90 (34%), Positives = 46/90 (51%), Gaps = 1/90 (1%) Query: 40 FDKVVTPSDVGKLNRLVIPKQHAEKYFP-LDAAANEKGLLLSFEDRTGKPWRFRYSYWNS 98 F KV+T SD +PK+HA + P LD + + D WRFR++Y + Sbjct: 126 FTKVLTASDTSAYGGFSVPKKHAIECLPPLDMSQPLPAQEILAIDLHDNQWRFRHNYRGT 185 Query: 99 SQSYVMTKGWSRFVKEKRLDAGDTVSFGRG 128 Q + +T GW+ F+ K+L GD + F RG Sbjct: 186 PQRHSLTTGWNEFITSKKLVKGDVIVFVRG 215 >At1g34170 | ARF Length = 623 Score = 57.4 bits (137), Expect = 5e-10, Method: Compositional matrix adjust. Identities = 34/94 (36%), Positives = 49/94 (52%), Gaps = 3/94 (3%) Query: 38 HMFDKVVTPSDVGKLNRLVIPKQHAEKYF-PLDAAANEKGLLLSFEDRTGKPWRFRYSYW 96 + F K++T SDV L+IPKQ+A + F PLD + L +D G+ W F++ + Sbjct: 124 YFFSKILTASDVSLSGGLIIPKQYAIECFPPLDMSQPISTQNLVAKDLYGQEWSFKHVFR 183 Query: 97 NSSQSYVMTK--GWSRFVKEKRLDAGDTVSFGRG 128 + Q ++ T GWS F KRL GD RG Sbjct: 184 GTPQRHMFTSGGGWSVFATTKRLIVGDIFVLLRG 217 >At1g34390 | ARF Length = 600 Score = 57.4 bits (137), Expect = 5e-10, Method: Compositional matrix adjust. Identities = 33/90 (36%), Positives = 47/90 (52%), Gaps = 3/90 (3%) Query: 40 FDKVVTPSDVGKLNRLVIPKQHAEKYFP-LDAAANEKGLLLSFEDRTGKPWRFRYSYWNS 98 F KV+T SD +PK+HA + P LD + L D G WRF ++Y + Sbjct: 126 FTKVLTASDTS--GGFFVPKKHAIECLPPLDMSQPLPTQELLATDLHGNQWRFNHNYRGT 183 Query: 99 SQSYVMTKGWSRFVKEKRLDAGDTVSFGRG 128 Q +++T GW+ F K+L AGD + F RG Sbjct: 184 PQRHLLTTGWNAFTTSKKLVAGDVIVFVRG 213 >At3g61830 | ARF Length = 602 Score = 57.4 bits (137), Expect = 5e-10, Method: Compositional matrix adjust. Identities = 33/97 (34%), Positives = 48/97 (49%), Gaps = 1/97 (1%) Query: 33 TVEKEHMFDKVVTPSDVGKLNRLVIPKQHAEKYFP-LDAAANEKGLLLSFEDRTGKPWRF 91 T ++ H F K++T SD + ++HA + P LD L D G WRF Sbjct: 121 TKQEFHSFVKILTASDTSTHGGFSVLRKHATECLPSLDMTQATPTQELVTRDLHGFEWRF 180 Query: 92 RYSYWNSSQSYVMTKGWSRFVKEKRLDAGDTVSFGRG 128 ++ + + +++T GWS FV KRL AGD F RG Sbjct: 181 KHIFRGQPRRHLLTTGWSTFVSSKRLVAGDAFVFLRG 217 >At1g19220 | ARF Length = 1086 Score = 57.0 bits (136), Expect = 6e-10, Method: Compositional matrix adjust. Identities = 33/90 (36%), Positives = 46/90 (51%), Gaps = 1/90 (1%) Query: 39 MFDKVVTPSDVGKLNRLVIPKQHAEKYFP-LDAAANEKGLLLSFEDRTGKPWRFRYSYWN 97 F K +T SD +P++ AEK FP LD + + +D W FR+ Y Sbjct: 125 FFCKTLTASDTSTHGGFSVPRRAAEKIFPPLDFSMQPPAQEIVAKDLHDTTWTFRHIYRG 184 Query: 98 SSQSYVMTKGWSRFVKEKRLDAGDTVSFGR 127 + +++T GWS FV KRL AGD+V F R Sbjct: 185 QPKRHLLTTGWSVFVSTKRLFAGDSVLFVR 214 >At1g30330 | ARF Length = 933 Score = 57.0 bits (136), Expect = 7e-10, Method: Compositional matrix adjust. Identities = 32/89 (35%), Positives = 46/89 (51%), Gaps = 1/89 (1%) Query: 38 HMFDKVVTPSDVGKLNRLVIPKQHAEKYFP-LDAAANEKGLLLSFEDRTGKPWRFRYSYW 96 + F K +T SD +P++ AEK FP LD + L D W+FR+ + Sbjct: 125 NYFCKTLTASDTSTHGGFSVPRRAAEKVFPPLDYSQQPPAQELMARDLHDNEWKFRHIFR 184 Query: 97 NSSQSYVMTKGWSRFVKEKRLDAGDTVSF 125 + +++T GWS FV KRL AGD+V F Sbjct: 185 GQPKRHLLTTGWSVFVSAKRLVAGDSVLF 213 >At5g20730 | ARF Length = 1165 Score = 56.6 bits (135), Expect = 8e-10, Method: Compositional matrix adjust. Identities = 34/94 (36%), Positives = 47/94 (50%), Gaps = 1/94 (1%) Query: 35 EKEHMFDKVVTPSDVGKLNRLVIPKQHAEKYFP-LDAAANEKGLLLSFEDRTGKPWRFRY 93 + F K +T SD +P++ AEK FP LD + L +D W FR+ Sbjct: 122 QPNEFFCKTLTASDTSTHGGFSVPRRAAEKIFPALDFSMQPPCQELVAKDIHDNTWTFRH 181 Query: 94 SYWNSSQSYVMTKGWSRFVKEKRLDAGDTVSFGR 127 Y + +++T GWS FV KRL AGD+V F R Sbjct: 182 IYRGQPKRHLLTTGWSVFVSTKRLFAGDSVLFIR 215 >At3g24650 | ABI3VP1 Length = 720 Score = 55.5 bits (132), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 33/88 (37%), Positives = 49/88 (55%), Gaps = 6/88 (6%) Query: 39 MFDKVVTPSDVGKLNRLVIPKQHAEKYFPLDAAANEKGLLLSFED-RTGKPWRFRYSYW- 96 + KV+ SDVG L R+V+PK+ AE + P A + G+ L+ ED T + W RY +W Sbjct: 571 LLQKVLKQSDVGNLGRIVLPKKEAETHLPELEARD--GISLAMEDIGTSRVWNMRYRFWP 628 Query: 97 -NSSQSYVMTKGWSRFVKEKRLDAGDTV 123 N S+ Y++ + FVK L GD + Sbjct: 629 NNKSRMYLL-ENTGDFVKTNGLQEGDFI 655 >At2g46530 | ARF Length = 601 Score = 53.9 bits (128), Expect = 6e-09, Method: Compositional matrix adjust. Identities = 31/90 (34%), Positives = 44/90 (48%), Gaps = 1/90 (1%) Query: 40 FDKVVTPSDVGKLNRLVIPKQHAEKYFP-LDAAANEKGLLLSFEDRTGKPWRFRYSYWNS 98 F K++T SD + ++HA + P LD L D G WRF++ + Sbjct: 124 FVKILTASDTSTHGGFSVLRKHATECLPSLDMTQPTPTQELVARDLHGYEWRFKHIFRGQ 183 Query: 99 SQSYVMTKGWSRFVKEKRLDAGDTVSFGRG 128 + +++T GWS FV KRL AGD F RG Sbjct: 184 PRRHLLTTGWSTFVTSKRLVAGDAFVFLRG 213 >At5g62000 | ARF Length = 859 Score = 53.9 bits (128), Expect = 6e-09, Method: Compositional matrix adjust. Identities = 31/92 (33%), Positives = 45/92 (48%), Gaps = 1/92 (1%) Query: 38 HMFDKVVTPSDVGKLNRLVIPKQHAEKYFP-LDAAANEKGLLLSFEDRTGKPWRFRYSYW 96 H F K +T SD + ++HA++ P LD + L +D WRFR+ + Sbjct: 162 HSFCKTLTASDTSTHGGFSVLRRHADECLPPLDMSRQPPTQELVAKDLHANEWRFRHIFR 221 Query: 97 NSSQSYVMTKGWSRFVKEKRLDAGDTVSFGRG 128 + +++ GWS FV KRL AGD F RG Sbjct: 222 GQPRRHLLQSGWSVFVSSKRLVAGDAFIFLRG 253 >At1g59750 | ARF Length = 665 Score = 53.5 bits (127), Expect = 8e-09, Method: Compositional matrix adjust. Identities = 32/98 (32%), Positives = 46/98 (46%), Gaps = 1/98 (1%) Query: 38 HMFDKVVTPSDVGKLNRLVIPKQHAEKYFP-LDAAANEKGLLLSFEDRTGKPWRFRYSYW 96 H F K +T SD + ++HA+ P LD + L D W FR+ + Sbjct: 122 HSFCKTLTASDTSTHGGFSVLRRHADDCLPPLDMSQQPPWQELVATDLHNSEWHFRHIFR 181 Query: 97 NSSQSYVMTKGWSRFVKEKRLDAGDTVSFGRGISEAAR 134 + +++T GWS FV K+L AGD F RG +E R Sbjct: 182 GQPRRHLLTTGWSVFVSSKKLVAGDAFIFLRGENEELR 219 >At3g26790 | ABI3VP1 Length = 313 Score = 50.4 bits (119), Expect = 6e-08, Method: Compositional matrix adjust. Identities = 31/88 (35%), Positives = 48/88 (54%), Gaps = 6/88 (6%) Query: 39 MFDKVVTPSDVGKLNRLVIPKQHAEKYFPLDAAANEKGLLLSFEDRTG-KPWRFRYSYW- 96 +F K + SDV L R+++PK+ AE + P A ++G+ + ED G W F+Y YW Sbjct: 91 LFQKELKNSDVSSLRRMILPKKAAEAHLP--ALECKEGIPIRMEDLDGFHVWTFKYRYWP 148 Query: 97 -NSSQSYVMTKGWSRFVKEKRLDAGDTV 123 N+S+ YV+ + FV L GD + Sbjct: 149 NNNSRMYVL-ENTGDFVNAHGLQLGDFI 175 >At1g43950 | ARF Length = 222 Score = 50.1 bits (118), Expect = 8e-08, Method: Compositional matrix adjust. Identities = 31/90 (34%), Positives = 41/90 (45%), Gaps = 4/90 (4%) Query: 40 FDKVVTPSDVGKLNRLVIPKQHAEKYFP-LDAAANEKGLLLSFEDRTGKPWRFRYSYWNS 98 F KV+T SD +P +HA + P LD + L D G WRF++SY Sbjct: 126 FTKVLTASDTSAQGEFSVPCKHAIECLPPLDMSQPIPAQELIAIDLHGNQWRFKHSYRVP 185 Query: 99 SQSYVMTKGWSRFVKEKRLDAGDTVSFGRG 128 T GW+ F K+L GD + F RG Sbjct: 186 RGD---TTGWNAFTTSKKLVVGDVIVFARG 212 >At1g28300 | ABI3VP1 Length = 363 Score = 49.3 bits (116), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 28/88 (31%), Positives = 51/88 (57%), Gaps = 6/88 (6%) Query: 41 DKVVTPSDVGKLNRLVIPKQHAEKYFPLDAAANEKGLLLSFEDR-TGKPWRFRYSYW--N 97 +K + SDVG L R+V+PK+ AE P ++++G+++ D + + W F+Y +W N Sbjct: 172 EKELKNSDVGSLGRIVLPKRDAEANLP--KLSDKEGIVVQMRDVFSMQSWSFKYKFWSNN 229 Query: 98 SSQSYVMTKGWSRFVKEKRLDAGDTVSF 125 S+ YV+ + FVK+ + GD ++ Sbjct: 230 KSRMYVL-ENTGEFVKQNGAEIGDFLTI 256 Database: agris_pep Posted date: Jun 9, 2008 2:43 AM Number of letters in database: 645,545 Number of sequences in database: 1749 Lambda K H 0.319 0.134 0.429 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 1749 Number of Hits to DB: 330,015 Number of extensions: 12229 Number of successful extensions: 158 Number of sequences better than 1.0e-02: 45 Number of HSP's gapped: 108 Number of HSP's successfully gapped: 45 Length of query: 259 Length of database: 645,545 Length adjustment: 77 Effective length of query: 182 Effective length of database: 510,872 Effective search space: 92978704 Effective search space used: 92978704 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.4 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.8 bits) S2: 75 (33.5 bits)