BLASTX 2.0MP-WashU [04-May-2006] [linux26-x64-I32LPF64 2006-05-10T17:22:28] Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA. All Rights Reserved. Reference: Gish, W. (1996-2006) http://blast.wustl.edu Gish, Warren and David J. States (1993). Identification of protein coding regions by database similarity search. Nat. Genet. 3:266-72. Query= MySampleSeq (14,601 letters) Translating both strands of query sequence in all 6 reading frames Database: UNIPROT_B9GCX0 1 sequences; 3829 total letters. Searching done Smallest Sum High Probability Sequences producing High-scoring Segment Pairs: Score P(N) N UNIPROT:B9GCX0 |B9GCX0|B9GCX0|SubName: Full=Putative unch... 7596 0. 11 >UNIPROT:B9GCX0 |B9GCX0|B9GCX0|SubName: Full=Putative uncharacterized protein; |Oryza sativa subsp japonica (Rice) |AA|3829 Length = 3829 Minus Strand HSPs: Score = 7596 (2679.0 bits), Expect = 0., Sum P(11) = 0., Group = 1 Identities = 1533/2058 (74%), Positives = 1675/2058 (81%), Frame = -2 Query: 10205 PGQTSDKGKSSNLCVIHIPDMHLQKEDDLSILKQCVDKFNVPPEHRFALLTRIRYARAFN 10026 P Q+SDK K SNLCVIHIPD+HLQKEDDLSILKQCVDKFNVP EHRF+L TRIRYA AFN Sbjct: 435 PDQSSDKAKPSNLCVIHIPDLHLQKEDDLSILKQCVDKFNVPSEHRFSLFTRIRYAHAFN 494 Query: 10025 SARTCRIYSRISLLSFIVLVQSSDAHDELTYFFTNEPEYINELIRLVRSEDSVPGSIRXX 9846 S RTCR+YSRISLL+FIVLVQSSDAHDELT FFTNEPEYINELIRLVRSE+ VPG IR Sbjct: 495 SPRTCRLYSRISLLAFIVLVQSSDAHDELTSFFTNEPEYINELIRLVRSEEFVPGPIRAL 554 Query: 9845 XXXXXXXXXXXXXSSHERARXXXXXXXXXXXXNRMVLLSVLQKAISSLNSLNDTSSPLIV 9666 SSHERAR NRMVLLSVLQKAISSL+S NDTSSPLIV Sbjct: 555 AMLALGAQLAAYASSHERARILSGSSIISAGGNRMVLLSVLQKAISSLSSPNDTSSPLIV 614 Query: 9665 DAXXXXXXXXXXXXXXXGTTVRGSGMVXXXXXXXRDNDPSHMHLVCLAVKTLQKLMEYSS 9486 DA GTTVRGSGMV +DNDPSHMHLVCLAVKTLQKLMEYSS Sbjct: 615 DALLQFFLLHVLSSSSSGTTVRGSGMVPPLLPLLQDNDPSHMHLVCLAVKTLQKLMEYSS 674 Query: 9485 PAVSLFKDLGGVELLSQRLHVEVQRVIGTADGHNSMVT-DAVKSDDNHMYSQKRLIKALL 9309 PAVSLFKDLGGVELLSQRLHVEVQRVIG D HNSMVT DA+KS+++H+YSQKRLIKALL Sbjct: 675 PAVSLFKDLGGVELLSQRLHVEVQRVIGV-DSHNSMVTSDALKSEEDHLYSQKRLIKALL 733 Query: 9308 KALGSATYSPGNPARSQSSQDNSLPVSLSLIFQNVDKFGGDIYFSAVTVMSEIIHKDPTC 9129 KALGSATYSP NPARSQSS DNSLP+SLSLIFQNVDKFGGDIYFSAVTVMSEIIHKDPTC Sbjct: 734 KALGSATYSPANPARSQSSNDNSLPISLSLIFQNVDKFGGDIYFSAVTVMSEIIHKDPTC 793 Query: 9128 FITLKELGVPDAFISSVTAGVIPSCKALICVPNGLGAICLNNQGLEAVRETSALRFLVDT 8949 F +LKELG+PDAF+SSV+AGVIPSCKALICVPNGLGAICLNNQGLEAVRETSALRFLVDT Sbjct: 794 FPSLKELGLPDAFLSSVSAGVIPSCKALICVPNGLGAICLNNQGLEAVRETSALRFLVDT 853 Query: 8948 FTSRKYLIPMNEGXXXXXXXXXXXXRHVQSLRSIGVDIIIEIINKLSSSQEYKNNE-TAT 8772 FTSRKYLIPMNEG RHVQSLRS GVDIIIEIINKLSS +E K+NE A+ Sbjct: 854 FTSRKYLIPMNEGVVLLANAVEELLRHVQSLRSTGVDIIIEIINKLSSPREDKSNEPAAS 913 Query: 8771 LQEKTDMETDVEGRDLVSAMDSSVDGSNDEQFSHLSIFHVMVLVHRTMENSETCRLFVEK 8592 E+T+METD EGRDLVSAMDSS DG+NDEQFSHLSIFHVMVLVHRTMENSETCRLFVEK Sbjct: 914 SDERTEMETDAEGRDLVSAMDSSEDGTNDEQFSHLSIFHVMVLVHRTMENSETCRLFVEK 973 Query: 8591 GGXXXXXXXXXRPSITQSSGGMPIALHSTMVFKGFTQHHSTPLARAFCSSLKEHLKSALK 8412 GG RPSITQSSGGMPIALHSTMVFKGFTQHHSTPLARAFCSSLKEHLK+AL+ Sbjct: 974 GGLQALLTLLLRPSITQSSGGMPIALHSTMVFKGFTQHHSTPLARAFCSSLKEHLKNALQ 1033 Query: 8411 ELDKVSNSFDMTKIEKGAIPSXXXXXXXXXXAASKDNRWMNALLSEFGDASREVLEDVGQ 8232 ELD V++S ++ K+EKGAIPS AASKDNRWMNALLSEFGD+SR+VLED+G+ Sbjct: 1034 ELDTVASSGEVAKLEKGAIPSLFVVEFLLFLAASKDNRWMNALLSEFGDSSRDVLEDIGR 1093 Query: 8231 VHREVLWKISLFEKNKIVXXXXXXXXXXXXXXPDMSASDIGDSRYTSFRQYLDPILRRRG 8052 VHREVLW+ISLFE+ K+ D + D+ DSRYTSFRQYLDP+LRRRG Sbjct: 1094 VHREVLWQISLFEEKKV--EPETSSPLANDSQQDAAVGDVDDSRYTSFRQYLDPLLRRRG 1151 Query: 8051 SGWNIESQVSDLINMYRDIGRAASDSQRVGSDRYSSLGLPXXXXXXXX-XXXXXXXXTRX 7875 SGWNIESQVSDLIN+YRDIGRAA DSQR Y S GLP T+ Sbjct: 1152 SGWNIESQVSDLINIYRDIGRAAGDSQR-----YPSAGLPSSSSQDQPPSSSDASASTKS 1206 Query: 7874 XXXXXXXXXXXCFDMMRSLSYHINHLFLELGKAMLFASRRENSPVNLSPAVISVANNIAS 7695 C DMMRSLSYHINHLF+ELGKAML SRRENSPVNLS +++SVA+NIAS Sbjct: 1207 EEDKKRSEHSSCCDMMRSLSYHINHLFMELGKAMLLTSRRENSPVNLSASIVSVASNIAS 1266 Query: 7694 IVLEHLNFEGHSVSFERDMTVTTKCRYLGKVVEFVDGMLLDRPESCNSIMVNSFYCRGVI 7515 IVLEHLNFEGH++S ER+ TV+TKCRYLGKVVEF+DG+LLDRPESCN IM+NSFYCRGVI Sbjct: 1267 IVLEHLNFEGHTISSERETTVSTKCRYLGKVVEFIDGILLDRPESCNPIMLNSFYCRGVI 1326 Query: 7514 QAILTTFQATSELLFTMSRPPSSPMETDSKTGKDGKEMDSSWIYGPLTSYGAIMDHLVTS 7335 QAILTTF+ATSELLF+M+R PSSPMETDSK+ K+ +E DSSWIYGPL+SYGAI+DHLVTS Sbjct: 1327 QAILTTFEATSELLFSMNRLPSSPMETDSKSVKEDRETDSSWIYGPLSSYGAILDHLVTS 1386 Query: 7334 SFILSSSTRQLLEQPIFNGSVRFPQDAETFMKLLQSKVLKTVLPIWAHPQFPECNIELIS 7155 SFILSSSTRQLLEQPIF+G++RFPQDAE FMKLLQS+VLKTVLPIW HPQFPECN+ELIS Sbjct: 1387 SFILSSSTRQLLEQPIFSGNIRFPQDAEKFMKLLQSRVLKTVLPIWTHPQFPECNVELIS 1446 Query: 7154 SVMSIMRHVCSGVEVKDTVGNGGARLAGPPPDESAISLIVEMGFSRARAEEALRQVGTNS 6975 SV SIMRHV SGVEVK+T N GARLAGPPPDE+AISLIVEMGFSRARAEEALRQVGTNS Sbjct: 1447 SVTSIMRHVYSGVEVKNTAINTGARLAGPPPDENAISLIVEMGFSRARAEEALRQVGTNS 1506 Query: 6974 VEIATDWLFAHPEEPQEEDDELARALAMSLGNSVTPAQEGDSRSNDLELEEATVQPPPID 6795 VEIATDWLF+HPEEPQE DDELARALAMSLGNS T AQE D +SNDLELEE TVQ PPID Sbjct: 1507 VEIATDWLFSHPEEPQE-DDELARALAMSLGNSDTSAQEEDGKSNDLELEEETVQLPPID 1565 Query: 6794 EMLRSCLQLLQRKEALAFSVRDMLVTISSQNDGQNRVKVLTYLIDNLKQCVVASEPSNDT 6615 E+L SCL+LLQ KE+LAF VRDML+T+SSQNDGQNRVKVLTYLID+LK C+++S+P T Sbjct: 1566 EVLSSCLRLLQTKESLAFPVRDMLLTMSSQNDGQNRVKVLTYLIDHLKNCLMSSDPLKST 1625 Query: 6614 XXXXXXXXXXXXXHGDTAAREVASKAGLVKVALDLLCSWEVQIRESSMIEVPNWVISCFL 6435 HGDTAAREVASKAGLVKVAL+LLCSWE++ R+ + +VPNWV SCFL Sbjct: 1626 ALSALFHVLALILHGDTAAREVASKAGLVKVALNLLCSWELEPRQGEISDVPNWVPSCFL 1685 Query: 6434 SVDQMLQLEPKLPDVTELHVLKRDNSNIKTSLVIDDSKRKDSESLPNVGLLDMEDQFQLL 6255 S+D+MLQL+PKLPDVTEL VLK+DNSN +TS+VIDDSK+KDSE+ + GLLD+EDQ QLL Sbjct: 1686 SIDRMLQLDPKLPDVTELDVLKKDNSNTQTSVVIDDSKKKDSEASSSTGLLDLEDQKQLL 1745 Query: 6254 KICCKCIGKQLPSASMHAILQLSATLTKVHAAAICFLESGGLNALLSLPTSSLFSGFNNM 6075 KICCKCI KQLPSA+MHAILQL ATLTK+HAAAICFLESGGL+ALLSLPTSSLFSGFN++ Sbjct: 1746 KICCKCIQKQLPSATMHAILQLCATLTKLHAAAICFLESGGLHALLSLPTSSLFSGFNSV 1805 Query: 6074 ASTIIRHILEDPHTLQQAMELEIRHSLVTAANRHANPRVTPRNFIQNLAFVVYRDPVIFM 5895 ASTIIRHILEDPHTLQQAMELEIRHSLVTAANRHANPRVTPRNF+QNLAFVVYRDPVIFM Sbjct: 1806 ASTIIRHILEDPHTLQQAMELEIRHSLVTAANRHANPRVTPRNFVQNLAFVVYRDPVIFM 1865 Query: 5894 KAAQSVCQIEMVGDRPYVVLLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSGDTAAGSP 5715 KAAQ+VCQIEMVGDRPYVVLL SGD A GSP Sbjct: 1866 KAAQAVCQIEMVGDRPYVVLLKDREKEKNKEKEKDKPADKDKTSGAATKMTSGDMALGSP 1925 Query: 5714 ANSHGKQSDLNSRNVKSHRKPPQSFVTVIEHLLDLLMSFVPPPRPEDQVD-VSGTALSSD 5538 +S GKQ+DLN+RNVKS+RKPPQSFVTVIE+LLDL+MSF+PPPR ED+ D S TA S+D Sbjct: 1926 ESSQGKQTDLNTRNVKSNRKPPQSFVTVIEYLLDLVMSFIPPPRAEDRPDGESSTASSTD 1985 Query: 5537 MDIDCSSAKGKGKAVSVPPEESKHAIQESTASLAKTAFFLKLLTDVLLTYASSIHVVLRH 5358 MDID SSAKGKGKAV+V PEESKHAIQE+TASLAK+AF LKLLTDVLLTYASSI VVLRH Sbjct: 1986 MDID-SSAKGKGKAVAVTPEESKHAIQEATASLAKSAFVLKLLTDVLLTYASSIQVVLRH 2044 Query: 5357 DAELSNMHGPNRTSARLTSGGIFNHILQHFLPHATRQKKERKNDGDWMYKLATRANQFLV 5178 DA+LSN GPNR ++SGG+F+HILQHFLPH+T+QKKERK DGDW YKLATRANQFLV Sbjct: 2045 DADLSNARGPNRIG--ISSGGVFSHILQHFLPHSTKQKKERKADGDWRYKLATRANQFLV 2102 Query: 5177 ASSIRSAEARKRIFSEICSIFLDFTDSSAGYNAPVPRMNVYVDLLNDILSARSPTGSSLS 4998 ASSIRSAE RKRIFSEICSIF+DFTDS AG P+ RMN YVDLLNDILSARSPTGSSLS Sbjct: 2103 ASSIRSAEGRKRIFSEICSIFVDFTDSPAGCKPPILRMNAYVDLLNDILSARSPTGSSLS 2162 Query: 4997 AESAVIFVEAGLVHSLSTMLQVLDLDHPDSAKIVTAVVKALELVSKEHIHSAD-NAKGVN 4821 AESAV FVE GLV LS LQV+DLDHPDSAKIVTA+VKALE+V+KEH+HSAD NAKG N Sbjct: 2163 AESAVTFVEVGLVQYLSKTLQVIDLDHPDSAKIVTAIVKALEVVTKEHVHSADLNAKGEN 2222 Query: 4820 SSKIAXXXXXXXXXXXRFQALDMTSQPTEMVTDHRETFNAVRTSQISDSVADEMDHDRDM 4641 SSK+ RFQALD T+QPTEMVTDHRE FNAV+TSQ SDSVADEMDHDRD+ Sbjct: 2223 SSKVVSDQSNLDPSSNRFQALD-TTQPTEMVTDHREAFNAVQTSQSSDSVADEMDHDRDL 2281 Query: 4640 DGGFARDGEDDFMHEMAEDGTGDGSTMEIRIEIPRNREDDMAPAADDTXXXXXXXXXXXX 4461 DGGFARDGEDDFMHE+AEDGT + STMEIR EIPRNREDDMA +D+ Sbjct: 2282 DGGFARDGEDDFMHEIAEDGTPNESTMEIRFEIPRNREDDMADDDEDSDEDMSADDGEEV 2341 Query: 4460 XXXXXXXXXXXXXX-----AHRMSHPXXXXXXXXXXXXXXXXXXXXXXXXXXXXX-GVIL 4299 AH+MSHP GVIL Sbjct: 2342 DEDEDEDEDEENNNLEEDDAHQMSHPDTDQEDREMDEEEFDEDLLEEDDDEDEDEEGVIL 2401 Query: 4298 RLEEGINGINVLDHVEVFGGSNNLSGDTLRVMPLDIFGTRRQGRSTSIYNLLGRASDHGV 4119 RLEEGINGINV DH+EVFGGSNNLSGDTLRVMPLDIFGTRRQGRSTSIYNLLGRA DHGV Sbjct: 2402 RLEEGINGINVFDHIEVFGGSNNLSGDTLRVMPLDIFGTRRQGRSTSIYNLLGRAGDHGV 2461 Query: 4118 LDHPLLEEPSSTTNFSDQ 4065 DHPLLEEPSS + Q Sbjct: 2462 FDHPLLEEPSSVLHLPQQ 2479 Score = 1665 (591.2 bits), Expect = 0., Sum P(11) = 0., Group = 1 Identities = 326/371 (87%), Positives = 342/371 (92%), Frame = -1 Query: 1119 LSDSAYLLVGEVLKKIVALAPFFCCHFINELARSMQNLTLRAMKELHLYENSEKALLSSS 940 LSD+AYLLV EVLKKIVALAPFFCCHFINELA SMQNLTL AMKELHLYE+SEKALLS+S Sbjct: 3194 LSDNAYLLVAEVLKKIVALAPFFCCHFINELAHSMQNLTLCAMKELHLYEDSEKALLSTS 3253 Query: 939 SANGTAVLRVVQALSSLVNTLQERKDPEQPAEKDHSDAVSQISEINTALDSLWLELSNCI 760 SANGTA+LRVVQALSSLV TLQE+KDP+ PAEKDHSDA+SQISEINTALD+LWLELSNCI Sbjct: 3254 SANGTAILRVVQALSSLVTTLQEKKDPDHPAEKDHSDALSQISEINTALDALWLELSNCI 3313 Query: 759 SKIESSSEYXXXXXXXXXXXXMLTTGVAPPLPAGTQNLLPYIESFFVTCEKLRPGQPDAV 580 SKIESSSEY LTTGVAPPLPAGTQN+LPYIESFFVTCEKLRPGQPDA+ Sbjct: 3314 SKIESSSEYASNLSPASANAATLTTGVAPPLPAGTQNILPYIESFFVTCEKLRPGQPDAI 3373 Query: 579 QDASTSDMEDASTSSGGQRSSACQASLDEKQNAFVKFSEKHRRLLNAFIRQNSGLLEKSF 400 Q+ASTSDMEDASTSSGGQ+SS A+LDEK NAFVKFSEKHRRLLNAFIRQN GLLEKSF Sbjct: 3374 QEASTSDMEDASTSSGGQKSSGSHANLDEKHNAFVKFSEKHRRLLNAFIRQNPGLLEKSF 3433 Query: 399 SLMLKIPRLIDFDNKRAYFRSKIKHQYDHHHHSPVRISVRRPYILEDSYNQLRMRSPQDL 220 SLMLKIPRLI+FDNKRAYFRSKIKHQ+DHHH SPVRISVRR YILEDSYNQLRMRSPQDL Sbjct: 3434 SLMLKIPRLIEFDNKRAYFRSKIKHQHDHHH-SPVRISVRRAYILEDSYNQLRMRSPQDL 3492 Query: 219 KGRLTVQFQGEEGIDAGGLTREWYQSISRVIVDKSALLFTTVGNDLTFQPNPNSVYQTEH 40 KGRLTV FQGEEGIDAGGLTREWYQ +SRVI DK ALLFTTVGNDLTFQPNPNSVYQTEH Sbjct: 3493 KGRLTVHFQGEEGIDAGGLTREWYQLLSRVIFDKGALLFTTVGNDLTFQPNPNSVYQTEH 3552 Query: 39 LSYFKFVGRVV 7 LSYFKFVGRVV Sbjct: 3553 LSYFKFVGRVV 3563 Score = 1356 (482.4 bits), Expect = 0., Sum P(11) = 0., Group = 1 Identities = 284/370 (76%), Positives = 307/370 (82%), Frame = -1 Query: 3882 ENLVEMAFSDRNHESSSSRLDAIFRSLRSGRNGHRFNMWLDDGPQRNGSAAPAVPEGIEE 3703 ENLVEMAFSDRNH++SSSRLDAIFRSLRSGR+GHRFNMWLDD PQR GSAAPAVPEGIEE Sbjct: 2483 ENLVEMAFSDRNHDNSSSRLDAIFRSLRSGRSGHRFNMWLDDSPQRTGSAAPAVPEGIEE 2542 Query: 3702 LLISHLRRPTP-QPDGQRTPVGGAQENDQPN----HGSDAEAREVAPAQQNENSESTLNP 3538 LL+S LRRPTP QPD Q TP GGA+ENDQ N H S+ EA AP +QNEN+++ + P Sbjct: 2543 LLVSQLRRPTPEQPDEQSTPAGGAEENDQSNQQHLHQSETEAGGDAPTEQNENNDNAVTP 2602 Query: 3537 -----LDLSECAGPAPPDSDALQRDVSNASELATEMQYERSDAITRDVEAVSQASSGSGA 3373 LD SE A PAPP S+ALQR+VS ASE ATEMQYERSDA+ RDVEAVSQASSGSGA Sbjct: 2603 AARSELDGSESADPAPP-SNALQREVSGASEHATEMQYERSDAVVRDVEAVSQASSGSGA 2661 Query: 3372 TLGESLRSLEVEIGSVEGHDDGDRHGTSGTSERLPLGDIQAAARSRRPSGNAVPVSSRDM 3193 TLGESLRSLEVEIGSVEGHDDGDRHG S +RLPLGD+QAA+RSRRP G+ V SSRD+ Sbjct: 2662 TLGESLRSLEVEIGSVEGHDDGDRHGAS---DRLPLGDLQAASRSRRPPGSVVLGSSRDI 2718 Query: 3192 SLESVSEVPQNPDQEPDQNASEGNQEPTRAAGADSIDPTFLEALPEDLRAEVLSSRQNQV 3013 SLESVSEVPQN +QE DQNA EG+QEP RAA DSIDPTFLEALPEDLRAEVLSSRQNQV Sbjct: 2719 SLESVSEVPQNQNQESDQNADEGDQEPNRAADTDSIDPTFLEALPEDLRAEVLSSRQNQV 2778 Query: 3012 TQTSNDQPQDDGDIDPEFLAALPPDIREEVLAXXXXXXXXXXXXXXXXXPVEMDAVSIIA 2833 TQTSN+QPQ+DGDIDPEFLAALPPDIREEVLA PVEMDAVSIIA Sbjct: 2779 TQTSNEQPQNDGDIDPEFLAALPPDIREEVLAQQRAQRLQQSQELEGQ-PVEMDAVSIIA 2837 Query: 2832 TFPSEIREEV 2803 TFPSEIREEV Sbjct: 2838 TFPSEIREEV 2847 Score = 323 (118.8 bits), Expect = 0., Sum P(11) = 0., Group = 1 Identities = 61/72 (84%), Positives = 67/72 (93%), Frame = -2 Query: 2351 LQPLYKGQLQKLLVNLCTHRGSRQALVQILVDMLMLDLQGFSKKSIDAPEPPFRLYGCHA 2172 +QPLYKGQLQ+LL+NLC HR SR++LVQILVDMLMLDLQG SKKSIDA EPPFRLYGCHA Sbjct: 2945 VQPLYKGQLQRLLLNLCAHRESRKSLVQILVDMLMLDLQGSSKKSIDATEPPFRLYGCHA 3004 Query: 2171 NIAYSRPQSSDG 2136 NI YSRPQS+DG Sbjct: 3005 NITYSRPQSTDG 3016 Score = 314 (115.6 bits), Expect = 0., Sum P(11) = 0., Group = 1 Identities = 55/70 (78%), Positives = 64/70 (91%), Frame = -2 Query: 10865 WKQGNFHHWRPLFIHFDTYFKTYISSRKDLLLSDDMTEADPMPKNAILKILRVMQIILEN 10686 + +GNFHHW+PLF+HFDTYFKT ISSRKDLLLSDDM E DP+PKN IL+ILRVMQI+LEN Sbjct: 303 FNKGNFHHWKPLFMHFDTYFKTQISSRKDLLLSDDMAEGDPLPKNTILQILRVMQIVLEN 362 Query: 10685 CQNRSSFTGL 10656 CQN++SF GL Sbjct: 363 CQNKTSFAGL 372 Score = 310 (114.2 bits), Expect = 0., Sum P(11) = 0., Group = 1 Identities = 64/93 (68%), Positives = 74/93 (79%), Frame = -1 Query: 1698 QLLNLLDVVMHNAENEIKQAKLEASSEKPSAPDNAVQDGKNNSDISVSYGSELNPEDGSK 1519 QLLNLL+VVM NAENEI QAKLEA+SEKPS P+NA QD + ++ + S GS+ N ED SK Sbjct: 3101 QLLNLLEVVMLNAENEITQAKLEAASEKPSGPENATQDAQEGANAAGSSGSKSNAEDSSK 3160 Query: 1518 APAVDNRSNLQAVLRSLPQPELRLLCSLLAHDG 1420 P VD S+LQ VL+SLPQ ELRLLCSLLAHDG Sbjct: 3161 LPPVDGESSLQKVLQSLPQAELRLLCSLLAHDG 3193 Score = 274 (101.5 bits), Expect = 0., Sum P(11) = 0., Group = 1 Identities = 55/87 (63%), Positives = 61/87 (70%), Frame = -2 Query: 2030 GLPPLVSRRVLETLTNLARSHPNVAKLLLFLEFPCPSRCFPEAHDHRHGKAVLLDDGEEQ 1851 G+PPLVSRRVLETLT LAR+HPNVAKLLLFLEFPCP C E D R GKAVL++ EQ Sbjct: 3016 GVPPLVSRRVLETLTYLARNHPNVAKLLLFLEFPCPPTCHAETSDQRRGKAVLMEGDSEQ 3075 Query: 1850 KTFAXXXXXXXXXXXXYMRSVAHLEQV 1770 +A YMRSVAHLEQ+ Sbjct: 3076 NAYALVLLLTLLNQPLYMRSVAHLEQL 3102 Score = 231 (86.4 bits), Expect = 0., Sum P(11) = 0., Group = 1 Identities = 46/71 (64%), Positives = 50/71 (70%), Frame = -2 Query: 10571 CVNSLPFL-CQHLKLLLASSDPEIXXXXXXXXXXXXKINPSKLHMNGKLISCGPINTHLL 10395 C N F +H +LLLASSDPEI KINPSKLHMNGKLI+CG IN+HLL Sbjct: 363 CQNKTSFAGLEHFRLLLASSDPEIVVAALETLAALVKINPSKLHMNGKLINCGAINSHLL 422 Query: 10394 SLAQGWGSKEE 10362 SLAQGWGSKEE Sbjct: 423 SLAQGWGSKEE 433 Score = 217 (81.4 bits), Expect = 0., Sum P(11) = 0., Group = 1 Identities = 46/70 (65%), Positives = 50/70 (71%), Frame = -3 Query: 2665 NMLRERFAHRYHSSSLFGMXXXXXXXXXXXX-DIMAAGLDRNTGDPSRS-TSKPIETEGA 2492 NMLRERFAHRYHS SLFGM DI+ +GLDRN GD SR TSKPIETEG+ Sbjct: 2868 NMLRERFAHRYHSGSLFGMNSRGRRGESSRRGDIIGSGLDRNAGDSSRQPTSKPIETEGS 2927 Query: 2491 PLVDEDGLKA 2462 PLVD+D LKA Sbjct: 2928 PLVDKDALKA 2937 Score = 159 (61.0 bits), Expect = 0., Sum P(11) = 0., Group = 1 Identities = 29/35 (82%), Positives = 32/35 (91%), Frame = -1 Query: 11037 PANIKAFIDRVVNIPLHDIAIPLSGFCWEFNKVNF 10933 PA +KAFIDRV++IPLHDIAIPLSGF WEFNK NF Sbjct: 274 PAKVKAFIDRVISIPLHDIAIPLSGFRWEFNKGNF 308 Score = 125 (49.1 bits), Expect = 0., Sum P(11) = 0., Group = 1 Identities = 27/41 (65%), Positives = 30/41 (73%), Frame = -3 Query: 14599 GFRSEXXXXXXXXXXHRASFPLRLQQILAGSRAVSPAIKIE 14477 G RSE HRASFPLRLQQIL+GSRAVSP+IK+E Sbjct: 231 GSRSEMAAAAAMAA-HRASFPLRLQQILSGSRAVSPSIKVE 270 Parameters: B=1000000 V=1000000 W=5 S2=65 X=10 cpus=8 filter=seg hspsepqmax=10000 hspmax=0 topcomboN=1 ctxfactor=5.77 E=10 Query ----- As Used ----- ----- Computed ---- Frame MatID Matrix name Lambda K H Lambda K H +3 0 BLOSUM62 0.318 0.134 0.401 0.350 0.152 0.535 Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a +2 0 BLOSUM62 0.318 0.134 0.401 0.346 0.150 0.530 Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a +1 0 BLOSUM62 0.318 0.134 0.401 0.345 0.148 0.496 Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a -1 0 BLOSUM62 0.318 0.134 0.401 0.351 0.155 0.580 Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a -2 0 BLOSUM62 0.318 0.134 0.401 0.337 0.145 0.465 Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a -3 0 BLOSUM62 0.318 0.134 0.401 0.358 0.157 0.604 Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a Query Frame MatID Length Eff.Length E S W T X E2 S2 +3 0 4866 4532 8.3 48 5 n/a 10 0.0044 48 44 0.21 40 +2 0 4866 4399 8.0 48 5 n/a 10 0.0044 48 44 0.21 40 +1 0 4867 4373 8.0 48 5 n/a 10 0.0044 48 44 0.21 40 -1 0 4867 4371 8.0 48 5 n/a 10 0.0044 48 44 0.21 40 -2 0 4866 4254 9.9 47 5 n/a 10 0.0061 47 44 0.21 40 -3 0 4866 4240 9.9 47 5 n/a 10 0.0061 47 44 0.21 40 Statistics: Database: UNIPROT_B9GCX0 Title: UNIPROT_B9GCX0 Posted: 3:30:56 PM CET Oct 29, 2009 Created: 3:30:56 PM CET Oct 29, 2009 Format: XDF-1 # of letters in database: 3829 # of sequences in database: 1 # of database sequences satisfying E: 1 No. of states in DFA: 32,067 (6765 KB) Total size of DFA: 7905 KB (8709 KB) Time to generate neighborhood: 0.03u 0.01s 0.04t Elapsed: 00:00:00 No. of threads or processors used: 1 Search cpu time: 0.00u 0.01s 0.01t Elapsed: 00:00:00 Total cpu time: 0.03u 0.03s 0.06t Elapsed: 00:00:00 Start: Fri Oct 30 09:12:00 2009 End: Fri Oct 30 09:12:00 2009