hmmpfam - search a single seq against HMM database HMMER 2.1.1 (Dec 1998) Copyright (C) 1992-1998 Washington University School of Medicine HMMER is freely distributed under the GNU General Public License (GPL). - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - HMM file: Rabbit4Lib.subtr.4 Sequence file: PFAM18 - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - Query: nbd27a05.y1 270 1 361 ; translated Scores for sequence family classification (score includes all domains): Model Description Score E-value N -------- ----------- ----- ------- --- Crystall Beta/Gamma crystallin -37.0 7.4 1 Parsed for domains: Model Domain seq-f seq-t hmm-f hmm-t score E-value -------- ------- ----- ----- ----- ----- ----- ------- Crystall 1/1 3 78 .. 1 92 [] -37.0 7.4 Alignments of top-scoring domains: Crystall: domain 1 of 1, from 3 to 78: score -37.0, E = 7.4 *->kitiYErenFqGrmyEltpGdDCpslqergsrcetVgSvkVlsGaWV + + + dD p q+ g+++++ g + + Ga nbd27a05.y 3 -------------KGDRS--DDNPTQQATGRDSNEAGTTHDHTGARA 34 gYEqNPnYrGrQYvLerDHH.GEYrrwddWggsAyrndrvqSlRri<-* + P+ r +Q r HH+G+ ++ ++ + +A+ +++ qS Rr nbd27a05.y 35 RTQN-PGNRENQHAQDRNHHpGDNKHGRERSPHAQ-TNQEQSNRRN 78 // Query: nbd27b12.x1; 758 1 548 minus strand; translated Scores for sequence family classification (score includes all domains): Model Description Score E-value N -------- ----------- ----- ------- --- [no hits above thresholds] Parsed for domains: Model Domain seq-f seq-t hmm-f hmm-t score E-value -------- ------- ----- ----- ----- ----- ----- ------- [no hits above thresholds] Alignments of top-scoring domains: [no hits above thresholds] // Query: nbd27c12.x1; Scores for sequence family classification (score includes all domains): Model Description Score E-value N -------- ----------- ----- ------- --- [no hits above thresholds] Parsed for domains: Model Domain seq-f seq-t hmm-f hmm-t score E-value -------- ------- ----- ----- ----- ----- ----- ------- [no hits above thresholds] Alignments of top-scoring domains: [no hits above thresholds] // Query: nbd27e02.y1 716 69 831 ; translated Scores for sequence family classification (score includes all domains): Model Description Score E-value N -------- ----------- ----- ------- --- IBB Importin beta binding domain 157.3 2.6e-43 1 Arm Armadillo/beta-catenin-like repeat 139.5 6e-38 3 HEAT HEAT repeat 52.1 1.2e-11 3 IBN_N Importin-beta N-terminal domain -3.6 2.1 1 Parsed for domains: Model Domain seq-f seq-t hmm-f hmm-t score E-value -------- ------- ----- ----- ----- ----- ----- ------- IBB 1/1 3 94 .. 1 101 [] 157.3 2.6e-43 HEAT 1/3 66 102 .. 1 36 [] 5.6 40 IBN_N 1/1 54 121 .. 1 85 [] -3.6 2.1 Arm 1/3 103 144 .. 1 41 [] 53.9 3.5e-12 HEAT 2/3 109 146 .. 1 36 [] 22.6 0.0096 Arm 2/3 146 186 .. 1 41 [] 57.9 2.2e-13 HEAT 3/3 152 188 .. 1 36 [] 24.1 0.0032 Arm 3/3 188 229 .. 1 41 [] 28.2 0.00019 Alignments of top-scoring domains: IBB: domain 1 of 1, from 3 to 94: score 157.3, E = 2.6e-43 *->essnkeeyRrksYKNkgvdaeEmRRRReEvsVElRKnKREEqLlKRR e+++ e++R ks+KNkg+d e+mRR+R+Ev+VElRKnKR+E+LlK+R nbd27e02.y 3 ENPGLENHRIKSFKNKGRDVETMRRHRNEVTVELRKNKRDEHLLKKR 49 NvglpdedsaepdeseldgssdkeaasqlslelpvmvqgvnSdDpenqLs Nv p+e+s+e +s++d++++ a+++ le+++ q++ Sd+p+ qLs nbd27e02.y 50 NV--PQEESLE--DSDVDADFK---AQNVTLEAIL--QNATSDNPVVQLS 90 atqa<-* a+qa nbd27e02.y 91 AVQA 94 HEAT: domain 1 of 3, from 66 to 102: score 5.6, E = 40 *->e.lldellplllkllnDpdpeVReaAaeaLgalaevl<-* ++++ l+++l+ +++++p V+++A++a +l++ nbd27e02.y 66 FkAQNVTLEAILQNATSDNPVVQLSAVQAARKLLSSD 102 IBN_N: domain 1 of 1, from 54 to 121: score -3.6, E = 2.1 *->AEkqLeqlekqklPgF...llaLlqIlansdtssdlqvRqlAalyLK E++Le+ + + +F+ ++++L Il+n++ ++ v+++A++ + nbd27e02.y 54 -EESLED-SDVD-ADFkaqNVTLEAILQNATSD-NPVVQLSAVQAAR 96 NlItrhWsshrkqggyeqrwlslpeeekeqIknnllnllgs<-* +l+++ + p + ++Ik+ +l+ l++ nbd27e02.y 97 KLLSSD-R-------------NPPID--DLIKSGILPILVK 121 Arm: domain 1 of 3, from 103 to 144: score 53.9, E = 3.5e-12 *->npenkqavveaGalppLvqLLs.spdeevqeeAawALsNLaa<-* +++++ ++++G+lp+Lv++L++++++++q+eAawAL+N+a+ nbd27e02.y 103 RNPPIDDLIKSGILPILVKCLErDDNPSLQFEAAWALTNIAS 144 HEAT: domain 2 of 3, from 109 to 146: score 22.6, E = 0.0096 *->e.lldellplllklln.DpdpeVReaAaeaLgalaevl<-* + +++ +lp+l+k+l++D++p+ + Aa+aL ++a+ nbd27e02.y 109 DlIKSGILPILVKCLErDDNPSLQFEAAWALTNIASGT 146 [output cut off at A = 5 top alignments] // Query: nbd29d05.y1 418 1 728 ; translated Scores for sequence family classification (score includes all domains): Model Description Score E-value N -------- ----------- ----- ------- --- DNase_II Deoxyribonuclease II 203.0 4.6e-57 1 Parsed for domains: Model Domain seq-f seq-t hmm-f hmm-t score E-value -------- ------- ----- ----- ----- ----- ----- ------- DNase_II 1/1 2 244 .] 1 381 [] 203.0 4.6e-57 Alignments of top-scoring domains: DNase_II: domain 1 of 1, from 2 to 244: score 203.0, E = 4.6e-57 *->lifLLLaallgvpgeatpalSCkdesGndVDWFv.vYKLPkhtssgd ++al DW+ ++YKLPk++++ d nbd29d05.y 2 ------------K---KEALA---------DWWFtFYKLPKRQDKED 24 vgkdasGLkYlYlDsnskgTWqdSaklInssesalgrTLqpLYdkhN.nt + GL+YlYlDs+ + W+ S +l ns++s lgrTLq+LY++ + + nbd29d05.y 25 GET---GLEYLYLDSTI-RSWRRSKQLMNSTKSVLGRTLQQLYEADAsES 70 sqtafllYNDqpPkskstsGikLeeiLsnrvysnythesvnySsgyGHtK + ta+l+YND++P +svnyS++yGHtK nbd29d05.y 71 NRTAYLIYNDAVP------------------------KSVNYSRKYGHTK 96 GvlllDgegGfWLVHSVPkFPpppsSaaYeYPtSGrqYGQTlLCvTlkya G+ll++g +GfWL+HS+P+FPp+p+ +Y YP+ Gr+ GQ+++C+T+k nbd29d05.y 97 GLLLWNGAQGFWLIHSIPRFPPIPE-EGYAYPSTGRRNGQSGICITFKHR 145 QfekIgkQLlynqPniYssklPgifasDeklpdLerviagqhvlkePfqs Q+e+I +QLl+ PniYs+ +P + ++l +++r + ++ ++P+++ nbd29d05.y 146 QYETIASQLLVCNPNIYSCSIPATLL--QELSHMARLCTTASSRESPVRR 193 sieLtSaaGasFqsFAKsgkfndDLYsgwvAptLktnLlVetWqrkageL +++L+Sa+G +F F Ks f dD +++w A+ L t Ll et + eL nbd29d05.y 194 VATLRSAQGTQFPPFCKSDSFLDDXFAAWMAQHLNTPLLTETGNE-KEEL 242 PsnCslpyhVlnvksIafPgpsssdFssteDHSKWcVSpkgpkLiyhWrv nbd29d05.y 243 ---------------LX--------------------------------- 244 GGgrWtCvGDlNRnkgqahRGGGTvCtkspalwkaF<-* nbd29d05.y - ------------------------------------ - // Query: nbd30a12.x1 966 104 821 ; translated Scores for sequence family classification (score includes all domains): Model Description Score E-value N -------- ----------- ----- ------- --- RRM_1 RNA recognition motif. (a.k.a. RRM, RBD, or 19.4 0.0015 1 Parsed for domains: Model Domain seq-f seq-t hmm-f hmm-t score E-value -------- ------- ----- ----- ----- ----- ----- ------- RRM_1 1/1 80 156 .. 1 74 [] 19.4 0.0015 Alignments of top-scoring domains: RRM_1: domain 1 of 1, from 80 to 156: score 19.4, E = 0.0015 *->lfVgNLpp......dtteedLkdlFskfGpiesikivrDttretgrs + V N p+ ++++ d + + ++FskfG+i + + e g++ nbd30a12.x 80 IVVDNVPQvgpdrlDKLKNVIHKIFSKFGKI-TNDYYPE---EDGKT 122 kGfaFVeFedeedAekAldalnG.kelggrelrv<-* +G+ F e++++ A +A+++ +G k ++++ rv nbd30a12.x 123 NGYIFLEYASPAHAVDAVKNADGyKLDKQHTFRV 156 // Query: Rabbit4Lib.1.C1 1212 39 923 nseq=3; translated Scores for sequence family classification (score includes all domains): Model Description Score E-value N -------- ----------- ----- ------- --- Annexin Annexin 224.8 1.2e-63 3 Pencillinase_R Penicillinase repressor -45.6 5.8 1 Copine Copine -77.7 5.6 1 Parsed for domains: Model Domain seq-f seq-t hmm-f hmm-t score E-value -------- ------- ----- ----- ----- ----- ----- ------- Annexin 1/3 43 109 .. 1 67 [] 90.0 4.7e-23 Annexin 2/3 115 181 .. 1 67 [] 122.3 8.8e-33 Copine 1/1 89 208 .. 1 160 [] -77.7 5.6 Pencillinase_R 1/1 99 210 .. 1 118 [] -45.6 5.8 Annexin 3/3 198 265 .. 1 67 [] 16.4 0.0084 Alignments of top-scoring domains: Annexin: domain 1 of 3, from 43 to 109: score 90.0, E = 4.7e-23 *->ayDAelLrkAmkGlGTDEdtlIrILatRsnaqlqaIkeaYkklygkd + D++ L++A+ +G+DE t+I+IL+ R+naq+q+Ik+aY ++ gk+ Rabbit4Lib 43 SSDVAALHQAIMVKGVDEATIIDILTKRNNAQRQQIKAAYLQEKGKP 89 LekdiksetSGdfeklLlaL<-* L++ +k+ ++G++e+++laL Rabbit4Lib 90 LDEVLKKALTGHLEEVVLAL 109 Annexin: domain 2 of 3, from 115 to 181: score 122.3, E = 8.8e-33 *->ayDAelLrkAmkGlGTDEdtlIrILatRsnaqlqaIkeaYkklygkd ++DA++Lr+AmkGlGTDEdtlI+ILa+R+n ++++I ++Y+++ ++d Rabbit4Lib 115 QFDADELRAAMKGLGTDEDTLIEILASRNNKEIREINRVYREELKRD 161 LekdiksetSGdfeklLlaL<-* L kdi+s+tSGdf+k+Ll+L Rabbit4Lib 162 LAKDIASDTSGDFQKALLSL 181 Copine: domain 1 of 1, from 89 to 208: score -77.7, E = 5.6 *->SLHyIspyqpN.pYeqAiravGeiLqdYDsDklfp.ayGFGAkiPpd +L++ + ++ ++ e+++ a+ ++ + +D+D l + + G G + d Rabbit4Lib 89 PLDEVLKKALTgHLEEVVLALLKTPAQFDADELRAaMKGLG---T-D 131 ysvshdedvFpLnfnpedpeCnGieGVleaYrealpnvqLsGPTnFaPiI + + + + ++++e + i+ ++Yre l Rabbit4Lib 132 EDTLIE-----ILASRNNKEIREIN---RVYREELKR------------- 160 naaariAeassaqeggqYh.VLlIiTDGqvtRsvDt.eGLSpDmkeT.vd + a++iA+ ++g++++ Ll ++ G + + G D+++T+ + Rabbit4Lib 161 DLAKDIAS----DTSGDFQkALLSLAKGDRS----EdFGVNEDLADTdAR 202 AIVsASklPLSIiiVGVG<-* A+ A G Rabbit4Lib 203 ALYEA------------G 208 Pencillinase_R: domain 1 of 1, from 99 to 210: score -45.6, E = 5.8 *->igdaEweVMrivWalgpPatvkevveeLpep.rdwkPaysTVkTllr g +E+ V+ + + + + e+++++ + + d Tl+ Rabbit4Lib 99 TGHLEEVVLALLKTPAQ-FDADELRAAMKGLgTDE-------DTLIE 137 RLvkKGalsrekdGRayiYsPlvseeeavrsavktlldrlfggsvgalva +L + + R+y +ee++r +k+ + + g +++ +++ Rabbit4Lib 138 ILASRNNKEIREINRVY-------REELKRDLAKDIASDTSG-DFQKALL 179 nfleee.........klSeddieeLrelLde<-* ++++ +++++ + +++l ++d +L e ++ Rabbit4Lib 180 SLAKGDrsedfgvneDLADTDARALYEAGER 210 Annexin: domain 3 of 3, from 198 to 265: score 16.4, E = 0.0084 *->ayDAe.lLrkAmkGlGTDEdtl........IrILatRsnaqlqaIke + DA l++++++++G D +++++ ++++ I I+ ++++ Rabbit4Lib 198 DTDARaLYEAGERRKGADVNVFtpfsppeaISIF--------XRVFQ 236 aYkklygkdLekdiksetSGdfeklLlaL<-* Y k +++d+ k ++ e++Gd+ek+L a+ Rabbit4Lib 237 KYSKYSQHDMNKVLDLELKGDIEKCLTAI 265 // Query: Rabbit4Lib.1.C2 1592 1 1112 nseq=33; translated Scores for sequence family classification (score includes all domains): Model Description Score E-value N -------- ----------- ----- ------- --- Annexin Annexin 336.3 3.4e-97 4 Pencillinase_R Penicillinase repressor -45.6 5.8 1 Copine Copine -77.7 5.6 1 Parsed for domains: Model Domain seq-f seq-t hmm-f hmm-t score E-value -------- ------- ----- ----- ----- ----- ----- ------- Annexin 1/4 69 135 .. 1 67 [] 90.0 4.7e-23 Annexin 2/4 141 207 .. 1 67 [] 122.3 8.8e-33 Copine 1/1 115 234 .. 1 160 [] -77.7 5.6 Pencillinase_R 1/1 125 236 .. 1 118 [] -45.6 5.8 Annexin 3/4 224 291 .. 1 67 [] 16.4 0.0084 Annexin 4/4 300 366 .. 1 67 [] 118.3 1.5e-31 Alignments of top-scoring domains: Annexin: domain 1 of 4, from 69 to 135: score 90.0, E = 4.7e-23 *->ayDAelLrkAmkGlGTDEdtlIrILatRsnaqlqaIkeaYkklygkd + D++ L++A+ +G+DE t+I+IL+ R+naq+q+Ik+aY ++ gk+ Rabbit4Lib 69 SSDVAALHQAIMVKGVDEATIIDILTKRNNAQRQQIKAAYLQEKGKP 115 LekdiksetSGdfeklLlaL<-* L++ +k+ ++G++e+++laL Rabbit4Lib 116 LDEVLKKALTGHLEEVVLAL 135 Annexin: domain 2 of 4, from 141 to 207: score 122.3, E = 8.8e-33 *->ayDAelLrkAmkGlGTDEdtlIrILatRsnaqlqaIkeaYkklygkd ++DA++Lr+AmkGlGTDEdtlI+ILa+R+n ++++I ++Y+++ ++d Rabbit4Lib 141 QFDADELRAAMKGLGTDEDTLIEILASRNNKEIREINRVYREELKRD 187 LekdiksetSGdfeklLlaL<-* L kdi+s+tSGdf+k+Ll+L Rabbit4Lib 188 LAKDIASDTSGDFQKALLSL 207 Copine: domain 1 of 1, from 115 to 234: score -77.7, E = 5.6 *->SLHyIspyqpN.pYeqAiravGeiLqdYDsDklfp.ayGFGAkiPpd +L++ + ++ ++ e+++ a+ ++ + +D+D l + + G G + d Rabbit4Lib 115 PLDEVLKKALTgHLEEVVLALLKTPAQFDADELRAaMKGLG---T-D 157 ysvshdedvFpLnfnpedpeCnGieGVleaYrealpnvqLsGPTnFaPiI + + + + ++++e + i+ ++Yre l Rabbit4Lib 158 EDTLIE-----ILASRNNKEIREIN---RVYREELKR------------- 186 naaariAeassaqeggqYh.VLlIiTDGqvtRsvDt.eGLSpDmkeT.vd + a++iA+ ++g++++ Ll ++ G + + G D+++T+ + Rabbit4Lib 187 DLAKDIAS----DTSGDFQkALLSLAKGDRS----EdFGVNEDLADTdAR 228 AIVsASklPLSIiiVGVG<-* A+ A G Rabbit4Lib 229 ALYEA------------G 234 Pencillinase_R: domain 1 of 1, from 125 to 236: score -45.6, E = 5.8 *->igdaEweVMrivWalgpPatvkevveeLpep.rdwkPaysTVkTllr g +E+ V+ + + + + e+++++ + + d Tl+ Rabbit4Lib 125 TGHLEEVVLALLKTPAQ-FDADELRAAMKGLgTDE-------DTLIE 163 RLvkKGalsrekdGRayiYsPlvseeeavrsavktlldrlfggsvgalva +L + + R+y +ee++r +k+ + + g +++ +++ Rabbit4Lib 164 ILASRNNKEIREINRVY-------REELKRDLAKDIASDTSG-DFQKALL 205 nfleee.........klSeddieeLrelLde<-* ++++ +++++ + +++l ++d +L e ++ Rabbit4Lib 206 SLAKGDrsedfgvneDLADTDARALYEAGER 236 Annexin: domain 3 of 4, from 224 to 291: score 16.4, E = 0.0084 *->ayDAe.lLrkAmkGlGTDEdtl........IrILatRsnaqlqaIke + DA l++++++++G D +++++ ++++ I I+ ++++ Rabbit4Lib 224 DTDARaLYEAGERRKGADVNVFtpfsppeaISIF--------XRVFQ 262 aYkklygkdLekdiksetSGdfeklLlaL<-* Y k +++d+ k ++ e++Gd+ek+L a+ Rabbit4Lib 263 KYSKYSQHDMNKVLDLELKGDIEKCLTAI 291 [output cut off at A = 5 top alignments] // Query: Rabbit4Lib.1.C3 619 223 522 nseq=2; minus strand; translated Scores for sequence family classification (score includes all domains): Model Description Score E-value N -------- ----------- ----- ------- --- Annexin Annexin 118.3 1.5e-31 1 Parsed for domains: Model Domain seq-f seq-t hmm-f hmm-t score E-value -------- ------- ----- ----- ----- ----- ----- ------- Annexin 1/1 29 95 .. 1 67 [] 118.3 1.5e-31 Alignments of top-scoring domains: Annexin: domain 1 of 1, from 29 to 95: score 118.3, E = 1.5e-31 *->ayDAelLrkAmkGlGTDEdtlIrILatRsnaqlqaIkeaYkklygkd ay+Ae+L++AmkG+GT++++lIrI+++Rs++++++Ik+ Y+k+yg + Rabbit4Lib 29 AYFAEKLYQAMKGAGTRHKALIRIMVSRSEVDMNDIKAFYQKKYGVS 75 LekdiksetSGdfeklLlaL<-* L ++i +et+Gd+ek+L+aL Rabbit4Lib 76 LCQAILDETKGDYEKILVAL 95 // Query: Rabbit4Lib.1.C4 1193 1 822 nseq=2; minus strand; translated Scores for sequence family classification (score includes all domains): Model Description Score E-value N -------- ----------- ----- ------- --- Annexin Annexin 247.3 2.2e-70 3 Pencillinase_R Penicillinase repressor -45.6 5.8 1 Copine Copine -77.7 5.6 1 Parsed for domains: Model Domain seq-f seq-t hmm-f hmm-t score E-value -------- ------- ----- ----- ----- ----- ----- ------- Annexin 1/3 45 111 .. 1 67 [] 122.3 8.8e-33 Copine 1/1 19 138 .. 1 160 [] -77.7 5.6 Pencillinase_R 1/1 29 140 .. 1 118 [] -45.6 5.8 Annexin 2/3 128 195 .. 1 67 [] 16.4 0.0084 Annexin 3/3 204 270 .. 1 67 [] 113.9 3.1e-30 Alignments of top-scoring domains: Annexin: domain 1 of 3, from 45 to 111: score 122.3, E = 8.8e-33 *->ayDAelLrkAmkGlGTDEdtlIrILatRsnaqlqaIkeaYkklygkd ++DA++Lr+AmkGlGTDEdtlI+ILa+R+n ++++I ++Y+++ ++d Rabbit4Lib 45 QFDADELRAAMKGLGTDEDTLIEILASRNNKEIREINRVYREELKRD 91 LekdiksetSGdfeklLlaL<-* L kdi+s+tSGdf+k+Ll+L Rabbit4Lib 92 LAKDIASDTSGDFQKALLSL 111 Copine: domain 1 of 1, from 19 to 138: score -77.7, E = 5.6 *->SLHyIspyqpN.pYeqAiravGeiLqdYDsDklfp.ayGFGAkiPpd +L++ + ++ ++ e+++ a+ ++ + +D+D l + + G G + d Rabbit4Lib 19 PLDEVLKKALTgHLEEVVLALLKTPAQFDADELRAaMKGLG---T-D 61 ysvshdedvFpLnfnpedpeCnGieGVleaYrealpnvqLsGPTnFaPiI + + + + ++++e + i+ ++Yre l Rabbit4Lib 62 EDTLIE-----ILASRNNKEIREIN---RVYREELKR------------- 90 naaariAeassaqeggqYh.VLlIiTDGqvtRsvDt.eGLSpDmkeT.vd + a++iA+ ++g++++ Ll ++ G + + G D+++T+ + Rabbit4Lib 91 DLAKDIAS----DTSGDFQkALLSLAKGDRS----EdFGVNEDLADTdAR 132 AIVsASklPLSIiiVGVG<-* A+ A G Rabbit4Lib 133 ALYEA------------G 138 Pencillinase_R: domain 1 of 1, from 29 to 140: score -45.6, E = 5.8 *->igdaEweVMrivWalgpPatvkevveeLpep.rdwkPaysTVkTllr g +E+ V+ + + + + e+++++ + + d Tl+ Rabbit4Lib 29 TGHLEEVVLALLKTPAQ-FDADELRAAMKGLgTDE-------DTLIE 67 RLvkKGalsrekdGRayiYsPlvseeeavrsavktlldrlfggsvgalva +L + + R+y +ee++r +k+ + + g +++ +++ Rabbit4Lib 68 ILASRNNKEIREINRVY-------REELKRDLAKDIASDTSG-DFQKALL 109 nfleee.........klSeddieeLrelLde<-* ++++ +++++ + +++l ++d +L e ++ Rabbit4Lib 110 SLAKGDrsedfgvneDLADTDARALYEAGER 140 Annexin: domain 2 of 3, from 128 to 195: score 16.4, E = 0.0084 *->ayDAe.lLrkAmkGlGTDEdtl........IrILatRsnaqlqaIke + DA l++++++++G D +++++ ++++ I I+ ++++ Rabbit4Lib 128 DTDARaLYEAGERRKGADVNVFtpfsppeaISIF--------XRVFQ 166 aYkklygkdLekdiksetSGdfeklLlaL<-* Y k +++d+ k ++ e++Gd+ek+L a+ Rabbit4Lib 167 KYSKYSQHDMNKVLDLELKGDIEKCLTAI 195 Annexin: domain 3 of 3, from 204 to 270: score 113.9, E = 3.1e-30 *->ayDAelLrkAmkGlGTDEdtlIrILatRsnaqlqaIkeaYkklygkd ay+Ae+L++AmkG+GT++++lIrI+++Rs++++++Ik+ Y+k+yg + Rabbit4Lib 204 AYFAEKLYQAMKGAGTRHKALIRIMVSRSEVDMNDIKAFYQKKYGVS 250 LekdiksetSGdfeklLlaL<-* L ++i +e +Gd+ek+L+aL Rabbit4Lib 251 LCQAILDEXKGDYEKILVAL 270 // Query: Rabbit4Lib.2.C1 544 1 756 nseq=2; minus strand; translated Scores for sequence family classification (score includes all domains): Model Description Score E-value N -------- ----------- ----- ------- --- Ribosomal_S6e Ribosomal protein S6e 245.3 8.6e-70 1 Parsed for domains: Model Domain seq-f seq-t hmm-f hmm-t score E-value -------- ------- ----- ----- ----- ----- ----- ------- Ribosomal_S6e 1/1 3 129 .. 1 127 [] 245.3 8.6e-70 Alignments of top-scoring domains: Ribosomal_S6e: domain 1 of 1, from 3 to 129: score 245.3, E = 8.6e-70 *->mklnvSyPatGtqkliEvDdehrlRvFyeKrlGqeVdGdavGdElkG +ln+S+PatG+qkliEvDde++lR+FyeKr+++eV++da+G+E+kG Rabbit4Lib 3 VRLNISFPATGCQKLIEVDDERKLRTFYEKRMATEVAADALGEEWKG 49 YvLkiaGGnDkqGFPMkqgVlgstrVrlLlskGhscyrPrRdGERKR... Yv++i+GGnDkqGFPMkqgVl+++rVrlLl+ G + + +GE ++ Rabbit4Lib 50 YVVRISGGNDKQGFPMKQGVLTHGRVRLLLRRGIPV---TDQGELEKesx 96 ksVRGciVdaDlsvlnlkivkkGekdIpgLtdd<-* ksVRGciVda+lsvlnl+ivkkGekdIpgLtd+ Rabbit4Lib 97 KSVRGCIVDANLSVLNLVIVKKGEKDIPGLTDT 129 // Query: Rabbit4Lib.2.Z10 544 1 756 nseq=2; minus strand; translated Scores for sequence family classification (score includes all domains): Model Description Score E-value N -------- ----------- ----- ------- --- Ribosomal_S26e Ribosomal protein S26e 233.3 3.4e-66 1 Parsed for domains: Model Domain seq-f seq-t hmm-f hmm-t score E-value -------- ------- ----- ----- ----- ----- ----- ------- Ribosomal_S26e 1/1 1 102 [. 1 114 [] 233.3 3.4e-66 Alignments of top-scoring domains: Ribosomal_S26e: domain 1 of 1, from 1 to 102: score 233.3, E = 3.4e-66 *->MtkKRrnnGRnKkGRGHVkpiRCtNCarcvPKDKAIKrfviRNiVEa kGRGHV+piRCtNCarcvPKDKAIK+fviRNiVEa Rabbit4Lib 1 ------------KGRGHVQPIRCTNCARCVPKDKAIKKFVIRNIVEA 35 aAvRDiseASVydeYvLPKlYakLhYCVSCAIHskiVRvRSREaRrdRtP aAvRDiseASV+d+YvLPKlY+kLhYCVSCAIHsk+VR+RSREaR+dRtP Rabbit4Lib 36 AAVRDISEASVFDAYVLPKLYVKLHYCVSCAIHSKVVRNRSREARKDRTP 85 PeRfrpnedakkvapap<-* P+ ++p+p Rabbit4Lib 86 PPDLDLLVLPHXPPPKP 102 // Query: Rabbit4Lib.2.C7 230 50 286 nseq=2; minus strand; translated Scores for sequence family classification (score includes all domains): Model Description Score E-value N -------- ----------- ----- ------- --- [no hits above thresholds] Parsed for domains: Model Domain seq-f seq-t hmm-f hmm-t score E-value -------- ------- ----- ----- ----- ----- ----- ------- [no hits above thresholds] Alignments of top-scoring domains: [no hits above thresholds] // Query: Rabbit4Lib.2.C8 526 1 804 nseq=37; minus strand; translated Scores for sequence family classification (score includes all domains): Model Description Score E-value N -------- ----------- ----- ------- --- Ribosomal_S6e Ribosomal protein S6e 252.3 6.7e-72 1 Parsed for domains: Model Domain seq-f seq-t hmm-f hmm-t score E-value -------- ------- ----- ----- ----- ----- ----- ------- Ribosomal_S6e 1/1 19 145 .. 1 127 [] 252.3 6.7e-72 Alignments of top-scoring domains: Ribosomal_S6e: domain 1 of 1, from 19 to 145: score 252.3, E = 6.7e-72 *->mklnvSyPatGtqkliEvDdehrlRvFyeKrlGqeVdGdavGdElkG mkln+S+PatG+qkliEvDde++lR+FyeKr+++eV++da+G+E+kG Rabbit4Lib 19 MKLNISFPATGCQKLIEVDDERKLRTFYEKRMATEVAADALGEEWKG 65 YvLkiaGGnDkqGFPMkqgVlgstrVrlLlskGhscyrPrRdGERKR... Yv++i+GGnDkqGFPMkqgVl+++rVrlLl+ G + + +GE ++ Rabbit4Lib 66 YVVRISGGNDKQGFPMKQGVLTHGRVRLLLRRGIPV---TDQGELEKesx 112 ksVRGciVdaDlsvlnlkivkkGekdIpgLtdd<-* ksVRGciVda+lsvlnl+ivkkGekdIpgLtd+ Rabbit4Lib 113 KSVRGCIVDANLSVLNLVIVKKGEKDIPGLTDT 145 // Query: Rabbit4Lib.2.C9 50 1 368 nseq=29; minus strand; translated Scores for sequence family classification (score includes all domains): Model Description Score E-value N -------- ----------- ----- ------- --- Ribosomal_S26e Ribosomal protein S26e 285.3 7.5e-82 1 Parsed for domains: Model Domain seq-f seq-t hmm-f hmm-t score E-value -------- ------- ----- ----- ----- ----- ----- ------- Ribosomal_S26e 1/1 8 121 .. 1 114 [] 285.3 7.5e-82 Alignments of top-scoring domains: Ribosomal_S26e: domain 1 of 1, from 8 to 121: score 285.3, E = 7.5e-82 *->MtkKRrnnGRnKkGRGHVkpiRCtNCarcvPKDKAIKrfviRNiVEa MtkKRrnnGR+KkGRGHV+piRCtNCarcvPKDKAIK+fviRNiVEa Rabbit4Lib 8 MTKKRRNNGRAKKGRGHVQPIRCTNCARCVPKDKAIKKFVIRNIVEA 54 aAvRDiseASVydeYvLPKlYakLhYCVSCAIHskiVRvRSREaRrdRtP aAvRDiseASV+d+YvLPKlY+kLhYCVSCAIHsk+VR+RSREaR+dRtP Rabbit4Lib 55 AAVRDISEASVFDAYVLPKLYVKLHYCVSCAIHSKVVRNRSREARKDRTP 104 PeRfrpnedakkvapap<-* P+ ++p+p Rabbit4Lib 105 PPDLDLLVLPHXPPPKP 121 // Query: Rabbit4Lib.2.C10 137 1 112 nseq=5; translated Scores for sequence family classification (score includes all domains): Model Description Score E-value N -------- ----------- ----- ------- --- [no hits above thresholds] Parsed for domains: Model Domain seq-f seq-t hmm-f hmm-t score E-value -------- ------- ----- ----- ----- ----- ----- ------- [no hits above thresholds] Alignments of top-scoring domains: [no hits above thresholds] // Query: Rabbit4Lib.4.C1 1189 102 749 nseq=6; minus strand; translated Scores for sequence family classification (score includes all domains): Model Description Score E-value N -------- ----------- ----- ------- --- HMG_box HMG (high mobility group) box 169.8 4.7e-47 2 Parsed for domains: Model Domain seq-f seq-t hmm-f hmm-t score E-value -------- ------- ----- ----- ----- ----- ----- ------- HMG_box 1/2 6 79 .. 1 69 [] 46.2 7.4e-10 HMG_box 2/2 95 163 .. 1 69 [] 131.6 1.4e-35 Alignments of top-scoring domains: HMG_box: domain 1 of 2, from 6 to 79: score 46.2, E = 7.4e-10 *->PKRPlsAFfl...frqeqRakikaenPglsna..eIskklGekWkaL PK+P + + f q R++ k+++P++s++ +e skk++e+Wk + Rabbit4Lib 6 PKKPERQNVIiafFVQTCREEHKKKHPDASVNfsEFSKKCSERWKTM 52 seeeKapYeakAekeKarYekempeYk<-* s++eK ++e++A+++KarYe+em+ Y Rabbit4Lib 53 SAKEKGKFEDMAKADKARYEREMKTYI 79 HMG_box: domain 2 of 2, from 95 to 163: score 131.6, E = 1.4e-35 *->PKRPlsAFflfrqeqRakikaenPglsnaeIskklGekWkaLseeeK PKRP+sAFflf++e R+kik e+Pgls+++++kklGe+W++ +++K Rabbit4Lib 95 PKRPPSAFFLFCSEYRPKIKGEHPGLSIGDVAKKLGEMWNNTAADDK 141 apYeakAekeKarYekempeYk<-* +pYe+kA+k+K++Yek++++Y+ Rabbit4Lib 142 QPYEKKAAKLKEKYEKDIAAYR 163 // Query: Rabbit4Lib.4.C2 560 98 833 nseq=2; minus strand; translated Scores for sequence family classification (score includes all domains): Model Description Score E-value N -------- ----------- ----- ------- --- DEAD DEAD/DEAH box helicase 229.2 5.8e-65 1 ResIII Type III restriction enzyme, res subunit -40.8 0.83 1 Parsed for domains: Model Domain seq-f seq-t hmm-f hmm-t score E-value -------- ------- ----- ----- ----- ----- ----- ------- ResIII 1/1 10 179 .. 1 244 [] -40.8 0.83 DEAD 1/1 12 184 .. 1 266 [] 229.2 5.8e-65 Alignments of top-scoring domains: ResIII: domain 1 of 1, from 10 to 179: score -40.8, E = 0.83 *->iklRpyQeeAierllesiekgelrlatglkdkdkkkrglivmATGsG ++ Q++ l ++ v+ TGsG Rabbit4Lib 10 TEPTAIQAQGWPVAL------------------SGLDMVGVAQTGSG 38 KTltaakiliarllkkqqklkhg.rid.d.s.kvLFlVprkdLleQalee KTl ++ l a + +h ++ ++ + + L+l+p+++L++Q + Rabbit4Lib 39 KTLSYL--LPAIVHI-----NHQpFLErGdGpICLVLAPTRELAQQVQ-- 79 Ftkfeskkkkef.knpgvdkklkvltdnqkdsalegkskkndieiiftti + +++ +++++ ++ +++ +++ +d+ + ei+++t Rabbit4Lib 80 --QVAAEYCRACrLKSTCIYGGAPKGPQIRDLER-------GVEICIATP 120 QkLskalklgkendeeekskstesvvglrlavesleflldefdliIiDEa +L +l+ gk ++l+ + +++ DEa Rabbit4Lib 121 GRLIDFLECGK---------------------TNLR----RTTYLVLDEA 145 Hrssakt.ksakededatklevyrkilekwelelnkkyfkpaflLGlTAT r + +++ rki + + ++ + L +AT Rabbit4Lib 146 DRMLDMGfEPQ-----------IRKIVD--------QIRPDRQTLMWSAT 176 Per<-* ++ Rabbit4Lib 177 WPK 179 DEAD: domain 1 of 1, from 12 to 184: score 229.2, E = 5.8e-65 RF xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx *->ptpiQaeaipaileneGfalredvlssggmdrlvlqApTGSGKTlaf pt+iQa+ +p++l +G d++ + +A+TGSGKTl + Rabbit4Lib 12 PTAIQAQGWPVAL--SG---L-DMV--------G-VAQTGSGKTLSY 43 RF xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx llPilygqrllkgpksarggksqgggknergfkidspqalvlaPTreLae llP++ +++++p+ rg++ p +lvlaPTreLa+ Rabbit4Lib 44 LLPAI--VHINHQPFLERGDG---------------PICLVLAPTRELAQ 76 RF xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx QiyeelkkllkilalsplgvnellrrigtglrvavlslyGGsslkdqldk Q+ +++ +++ l+ ++ yGG+++++q++ Rabbit4Lib 77 QVQQVAAEYCR----------------ACRLKSTCI--YGGAPKGPQIRD 108 RF x xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx l.rgkreskggpdIvvgTPgrLldllrngrinikievssertgklklknl l+r g+ I ++TPgrL+d+l+ g ++ +l++ Rabbit4Lib 109 LeR-------GVEICIATPGRLIDFLECG----------KT----NLRRT 137 RF xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx khlkllVlDEahrlldmghgFgedleeilrrlprneplraqllgtilHqk +lVlDEa+r+ldm gF++++++i++++++ +r Rabbit4Lib 138 ---TYLVLDEADRMLDM--GFEPQIRKIVDQIRP---DR----------- 168 RF xxxxxxxxxxxxxxxxxxxx pniQtllfSATlpprevedl<-* Qtl+ SAT+ p+ev+ l Rabbit4Lib 169 ---QTLMWSATW-PKEVRQL 184 // Query: Rabbit4Lib.4.C3 427 32 772 nseq=6; minus strand; translated Scores for sequence family classification (score includes all domains): Model Description Score E-value N -------- ----------- ----- ------- --- P68HR P68HR (NUC004) repeat 128.9 9.1e-35 2 Helicase_C Helicase conserved C-terminal domain 54.0 3.2e-12 1 Parsed for domains: Model Domain seq-f seq-t hmm-f hmm-t score E-value -------- ------- ----- ----- ----- ----- ----- ------- Helicase_C 1/1 2 61 .. 1 76 [] 54.0 3.2e-12 P68HR 1/2 130 164 .. 1 35 [] 71.7 1.6e-17 P68HR 2/2 183 215 .. 1 35 [] 64.7 2e-15 Alignments of top-scoring domains: Helicase_C: domain 1 of 1, from 2 to 61: score 54.0, E = 3.2e-12 *->llepgikvarlhGglsqeeReeilekFrsgkskvLvaTdvaarGlDi +hG++sq+eR+++l++F++gk ++L+aTdva+rGlD+ Rabbit4Lib 2 ---------GIHGDKSQQERDWVLNEFKHGKAPILIATDVASRGLDV 39 pdvnlVInydlpwnpesyiQRiGRaGRaG<-* dv +VInyd+p + e+yi+ Rabbit4Lib 40 EDVKFVINYDYPNSSEDYIHEL------- 61 P68HR: domain 1 of 2, from 130 to 164: score 71.7, E = 1.6e-17 *->sAGkqgGFrtgnprgtYqnGYdsLlkrdfGskaqn<-* sAGk+gGF+t+++r++Y++GY+sLlkrdfG+k+qn Rabbit4Lib 130 SAGKRGGFNTFRDRENYDRGYSSLLKRDFGAKTQN 164 P68HR: domain 2 of 2, from 183 to 215: score 64.7, E = 2e-15 *->sAGkqgGFrtgnprgtYqnGYdsLlkrdfGskaqn<-* sAG q++Frtgnp+gtYqnGYds ++++Gs+++n Rabbit4Lib 183 SAGLQTSFRTGNPTGTYQNGYDS--TQQYGSNVPN 215 // Query: Rabbit4Lib.6.C1 566 1 562 nseq=2; minus strand; translated Scores for sequence family classification (score includes all domains): Model Description Score E-value N -------- ----------- ----- ------- --- HCaRG HCaRG protein 180.8 2.2e-50 1 Parsed for domains: Model Domain seq-f seq-t hmm-f hmm-t score E-value -------- ------- ----- ----- ----- ----- ----- ------- HCaRG 1/1 11 183 .. 1 196 [] 180.8 2.2e-50 Alignments of top-scoring domains: HCaRG: domain 1 of 1, from 11 to 183: score 180.8, E = 2.2e-50 *->lslLkkldseqlrqLlsvifekLlgqaeselseeeeellaaleklaa ++lL+ l +++++++ ++ e L++q ++e Rabbit4Lib 11 SGLLNGLAQDAFHGHPGITEELLRSQLYPE----------------- 40 sasvppeelkhllaglstllksalklPkhslkpdelqqqL....keqlgL v pee++++la+++ +lks+++ +++++++l+++L+ ++k+q g+ Rabbit4Lib 41 ---VQPEEFRPFLAKMRGILKSIAS---ADMDFNQLEAFLtaqtKKQGGI 84 deelaedlskvykshrkelreslsqqslslpsAqlsdlqWRvdvqlsSsa ++e+a+++sk++ksh++++resl++qs++++ l+ l+WRvd +++S++ Rabbit4Lib 85 TSEQAAVISKFWKSHKTKIRESLVNQSRWDN--GLRGLSWRVDGKSQSRH 132 larskgsPsvlLqLklvnndgqsveavtfElsleeLqeLlnkLeealkel +++++ +P+++++L+l + gq++e+ ++E+++ ++ ++l+kL+e+++++ Rabbit4Lib 133 STQIH-APVAIIELELGKS-GQESEFLCLEFDEVKVNQILKKLSEVEESI 180 eal<-* +al Rabbit4Lib 181 SAL 183 // Query: Rabbit4Lib.7.C2 1062 1 718 nseq=5; minus strand; translated Scores for sequence family classification (score includes all domains): Model Description Score E-value N -------- ----------- ----- ------- --- Ribosomal_S7 Ribosomal protein S7p/S5e 222.6 5.7e-63 1 Parsed for domains: Model Domain seq-f seq-t hmm-f hmm-t score E-value -------- ------- ----- ----- ----- ----- ----- ------- Ribosomal_S7 1/1 79 232 .. 1 158 [] 222.6 5.7e-63 Alignments of top-scoring domains: Ribosomal_S7: domain 1 of 1, from 79 to 232: score 222.6, E = 5.7e-63 *->msRrrvakKrfikpDpiynsrLvnklinkimklSdGKKslAerIvYe +s++r+a Krf k+++++++rL n +++++++ +GKK + rIv++ Rabbit4Lib 79 HSAGRYAAKRFRKAQCPIVERLTNSMMMHGRN--NGKKLMTVRIVKH 123 AleiIeertkgedPlqVlvqAieNvkPrvEVrsrRvGGGttyQVPveVrp A+eiI+ +t ge+PlqVlv+Ai N++Pr++ +++ G+ ++V+p Rabbit4Lib 124 AFEIIHLLT-GENPLQVLVNAIINSGPREDSTRIGEL-GQCDDRLSDVSP 171 dRRlaLAlRWliegArkRaek..KkismaekLAnElidAanntGksaAiK +RR+++A++ l+ gAr++a+++ K ++ae+LA+Eli+Aa++ +s+AiK Rabbit4Lib 172 LRRVNQAIWLLCTGAREAAFRniK--TIAECLADELINAAKGSSNSYAIK 219 KKEEiHRmAeANK<-* KK+E++R+A++N Rabbit4Lib 220 KKDELERVAKSNP 232 // Query: Rabbit4Lib.8.C1 602 39 462 nseq=2; minus strand; translated Scores for sequence family classification (score includes all domains): Model Description Score E-value N -------- ----------- ----- ------- --- efhand EF hand 122.6 7.5e-33 3 Parsed for domains: Model Domain seq-f seq-t hmm-f hmm-t score E-value -------- ------- ----- ----- ----- ----- ----- ------- efhand 1/3 16 44 .. 1 29 [] 41.8 1.5e-08 efhand 2/3 52 80 .. 1 29 [] 40.5 3.8e-08 efhand 3/3 89 117 .. 1 29 [] 44.0 3.4e-09 Alignments of top-scoring domains: efhand: domain 1 of 3, from 16 to 44: score 41.8, E = 1.5e-08 *->elkeaFkefDkDgDGkIsfeEfkaalkkl<-* e+keaF++fDkDgDG+I+ +E+ +++++l Rabbit4Lib 16 EFKEAFSLFDKDGDGTITTKELGTVMRSL 44 efhand: domain 2 of 3, from 52 to 80: score 40.5, E = 3.8e-08 *->elkeaFkefDkDgDGkIsfeEfkaalkkl<-* el+++++e+D+Dg+G+I+f Ef+++++++ Rabbit4Lib 52 ELQDMINEVDADGNGTIDFPEFLTMMARK 80 efhand: domain 3 of 3, from 89 to 117: score 44.0, E = 3.4e-09 *->elkeaFkefDkDgDGkIsfeEfkaalkkl<-* e++eaF++fDkDg+G+Is E+++++++l Rabbit4Lib 89 EIREAFRVFDKDGNGYISAAELRHVMTNL 117 // Query: Rabbit4Lib.8.C2 602 30 453 nseq=2; minus strand; translated Scores for sequence family classification (score includes all domains): Model Description Score E-value N -------- ----------- ----- ------- --- efhand EF hand 122.6 7.5e-33 3 Parsed for domains: Model Domain seq-f seq-t hmm-f hmm-t score E-value -------- ------- ----- ----- ----- ----- ----- ------- efhand 1/3 16 44 .. 1 29 [] 41.8 1.5e-08 efhand 2/3 52 80 .. 1 29 [] 40.5 3.8e-08 efhand 3/3 89 117 .. 1 29 [] 44.0 3.4e-09 Alignments of top-scoring domains: efhand: domain 1 of 3, from 16 to 44: score 41.8, E = 1.5e-08 *->elkeaFkefDkDgDGkIsfeEfkaalkkl<-* e+keaF++fDkDgDG+I+ +E+ +++++l Rabbit4Lib 16 EFKEAFSLFDKDGDGTITTKELGTVMRSL 44 efhand: domain 2 of 3, from 52 to 80: score 40.5, E = 3.8e-08 *->elkeaFkefDkDgDGkIsfeEfkaalkkl<-* el+++++e+D+Dg+G+I+f Ef+++++++ Rabbit4Lib 52 ELQDMINEVDADGNGTIDFPEFLTMMARK 80 efhand: domain 3 of 3, from 89 to 117: score 44.0, E = 3.4e-09 *->elkeaFkefDkDgDGkIsfeEfkaalkkl<-* e++eaF++fDkDg+G+Is E+++++++l Rabbit4Lib 89 EIREAFRVFDKDGNGYISAAELRHVMTNL 117 // Query: Rabbit4Lib.8.C3 602 33 456 nseq=2; translated Scores for sequence family classification (score includes all domains): Model Description Score E-value N -------- ----------- ----- ------- --- efhand EF hand 122.6 7.5e-33 3 Parsed for domains: Model Domain seq-f seq-t hmm-f hmm-t score E-value -------- ------- ----- ----- ----- ----- ----- ------- efhand 1/3 16 44 .. 1 29 [] 41.8 1.5e-08 efhand 2/3 52 80 .. 1 29 [] 40.5 3.8e-08 efhand 3/3 89 117 .. 1 29 [] 44.0 3.4e-09 Alignments of top-scoring domains: efhand: domain 1 of 3, from 16 to 44: score 41.8, E = 1.5e-08 *->elkeaFkefDkDgDGkIsfeEfkaalkkl<-* e+keaF++fDkDgDG+I+ +E+ +++++l Rabbit4Lib 16 EFKEAFSLFDKDGDGTITTKELGTVMRSL 44 efhand: domain 2 of 3, from 52 to 80: score 40.5, E = 3.8e-08 *->elkeaFkefDkDgDGkIsfeEfkaalkkl<-* el+++++e+D+Dg+G+I+f Ef+++++++ Rabbit4Lib 52 ELQDMINEVDADGNGTIDFPEFLTMMARK 80 efhand: domain 3 of 3, from 89 to 117: score 44.0, E = 3.4e-09 *->elkeaFkefDkDgDGkIsfeEfkaalkkl<-* e++eaF++fDkDg+G+Is E+++++++l Rabbit4Lib 89 EIREAFRVFDKDGNGYISAAELRHVMTNL 117 // Query: Rabbit4Lib.8.C4 602 70 493 nseq=60; translated Scores for sequence family classification (score includes all domains): Model Description Score E-value N -------- ----------- ----- ------- --- efhand EF hand 122.6 7.5e-33 3 Parsed for domains: Model Domain seq-f seq-t hmm-f hmm-t score E-value -------- ------- ----- ----- ----- ----- ----- ------- efhand 1/3 16 44 .. 1 29 [] 41.8 1.5e-08 efhand 2/3 52 80 .. 1 29 [] 40.5 3.8e-08 efhand 3/3 89 117 .. 1 29 [] 44.0 3.4e-09 Alignments of top-scoring domains: efhand: domain 1 of 3, from 16 to 44: score 41.8, E = 1.5e-08 *->elkeaFkefDkDgDGkIsfeEfkaalkkl<-* e+keaF++fDkDgDG+I+ +E+ +++++l Rabbit4Lib 16 EFKEAFSLFDKDGDGTITTKELGTVMRSL 44 efhand: domain 2 of 3, from 52 to 80: score 40.5, E = 3.8e-08 *->elkeaFkefDkDgDGkIsfeEfkaalkkl<-* el+++++e+D+Dg+G+I+f Ef+++++++ Rabbit4Lib 52 ELQDMINEVDADGNGTIDFPEFLTMMARK 80 efhand: domain 3 of 3, from 89 to 117: score 44.0, E = 3.4e-09 *->elkeaFkefDkDgDGkIsfeEfkaalkkl<-* e++eaF++fDkDg+G+Is E+++++++l Rabbit4Lib 89 EIREAFRVFDKDGNGYISAAELRHVMTNL 117 // Query: Rabbit4Lib.9.C1 524 34 480 nseq=2; minus strand; translated Scores for sequence family classification (score includes all domains): Model Description Score E-value N -------- ----------- ----- ------- --- [no hits above thresholds] Parsed for domains: Model Domain seq-f seq-t hmm-f hmm-t score E-value -------- ------- ----- ----- ----- ----- ----- ------- [no hits above thresholds] Alignments of top-scoring domains: [no hits above thresholds] // Query: Rabbit4Lib.10.C1 350 1 389 nseq=2; minus strand; translated Scores for sequence family classification (score includes all domains): Model Description Score E-value N -------- ----------- ----- ------- --- Ribosomal_S3Ae Ribosomal S3Ae family 11.8 2.3e-06 1 Parsed for domains: Model Domain seq-f seq-t hmm-f hmm-t score E-value -------- ------- ----- ----- ----- ----- ----- ------- Ribosomal_S3Ae 1/1 1 87 [. 1 215 [] 11.8 2.3e-06 Alignments of top-scoring domains: Ribosomal_S3Ae: domain 1 of 1, from 1 to 87: score 11.8, E = 2.3e-06 *->kgKkgrKvkkVvDpFtrKdWYdIkAPnmFgnrnvGkTLvnrtqGtKi +r+ Rabbit4Lib 1 --------------------------------------XTRP----- 4 AsdgLkGRvfEvsLaDLqgDpseehsfrKlkLkvedVqGknalTnFhGmd Rabbit4Lib - -------------------------------------------------- - lTtDklrSlvRkwqSlIEAivdVkTtDGYkLRvfaiafTkkranqvKkts ++fTkkr+nq++kts Rabbit4Lib 5 -----------------------------------VGFTKKRNNQIRKTS 19 YAqssqiraIRkkMeeiikeeasekdlkqlVqklipgsIakeIekackkI YAq++q+r+IRkkM+ei+++e++++dlk++V+klip+sI+k+Iekac++I Rabbit4Lib 20 YAQHQQVRQIRKKMMEIMTREVQTNDLKEVVNKLIPDSIGKDIEKACQSI 69 YPLqnVeIrKvkvLkePk<-* YPL++V++rKvk+Lk+Pk Rabbit4Lib 70 YPLHDVFVRKVKMLKKPK 87 // Query: Rabbit4Lib.10.C2 718 27 821 nseq=57; minus strand; translated Scores for sequence family classification (score includes all domains): Model Description Score E-value N -------- ----------- ----- ------- --- Ribosomal_S3Ae Ribosomal S3Ae family 520.5 1.2e-152 1 Abhydro_lipase ab-hydrolase associated lipase region -17.9 2.7 1 Parsed for domains: Model Domain seq-f seq-t hmm-f hmm-t score E-value -------- ------- ----- ----- ----- ----- ----- ------- Abhydro_lipase 1/1 104 164 .. 1 71 [] -17.9 2.7 Ribosomal_S3Ae 1/1 12 222 .. 1 215 [] 520.5 1.2e-152 Alignments of top-scoring domains: Abhydro_lipase: domain 1 of 1, from 104 to 164: score -17.9, E = 2.7 *->idpeanlnvsqlIekwGYpsEeH.tVtTeDGYILtLhRIpkgkknkt + + ++ + +kw E+H V T+DGY+L L + + kk+ Rabbit4Lib 104 DLTRDKMCS--MVKKWQTMIEAHvDVKTTDGYLLRLFCVGFTKKR-- 146 elgkrPvVlLQHGLlasSsnWVvNl<-* ++ r+ + QH V + Rabbit4Lib 147 NNQIRKTSYAQH-------QQVRQI 164 Ribosomal_S3Ae: domain 1 of 1, from 12 to 222: score 520.5, E = 1.2e-152 *->kgKkgrKvkkVvDpFtrKdWYdIkAPnmFgnrnvGkTLvnrtqGtKi +gKkg+K kkVvDpF++KdWYd+kAP+mF++rn+GkTLv+rtqGtKi Rabbit4Lib 12 GGKKGAK-KKVVDPFSKKDWYDVKAPAMFNIRNIGKTLVTRTQGTKI 57 AsdgLkGRvfEvsLaDLqgDpseehsfrKlkLkvedVqGknalTnFhGmd AsdgLkGRvfEvsLaDLq+D e +frK+kL++edVqGkn+lTnFhGmd Rabbit4Lib 58 ASDGLKGRVFEVSLADLQND---EVAFRKFKLITEDVQGKNCLTNFHGMD 104 lTtDklrSlvRkwqSlIEAivdVkTtDGYkLRvfaiafTkkranqvKkts lT+Dk++S+v+kwq++IEA+vdVkTtDGY+LR+f+++fTkkr+nq++kts Rabbit4Lib 105 LTRDKMCSMVKKWQTMIEAHVDVKTTDGYLLRLFCVGFTKKRNNQIRKTS 154 YAqssqiraIRkkMeeiikeeasekdlkqlVqklipgsIakeIekackkI YAq++q+r+IRkkM+ei+++e++++dlk++V+klip+sI+k+Iekac++I Rabbit4Lib 155 YAQHQQVRQIRKKMMEIMTREVQTNDLKEVVNKLIPDSIGKDIEKACQSI 204 YPLqnVeIrKvkvLkePk<-* YPL++V++rKvk+Lk+Pk Rabbit4Lib 205 YPLHDVFVRKVKMLKKPK 222 // Query: Rabbit4Lib.10.C3 687 36 828 nseq=3; minus strand; translated Scores for sequence family classification (score includes all domains): Model Description Score E-value N -------- ----------- ----- ------- --- Ribosomal_S3Ae Ribosomal S3Ae family 520.5 1.2e-152 1 Abhydro_lipase ab-hydrolase associated lipase region -17.9 2.7 1 Parsed for domains: Model Domain seq-f seq-t hmm-f hmm-t score E-value -------- ------- ----- ----- ----- ----- ----- ------- Abhydro_lipase 1/1 104 164 .. 1 71 [] -17.9 2.7 Ribosomal_S3Ae 1/1 12 222 .. 1 215 [] 520.5 1.2e-152 Alignments of top-scoring domains: Abhydro_lipase: domain 1 of 1, from 104 to 164: score -17.9, E = 2.7 *->idpeanlnvsqlIekwGYpsEeH.tVtTeDGYILtLhRIpkgkknkt + + ++ + +kw E+H V T+DGY+L L + + kk+ Rabbit4Lib 104 DLTRDKMCS--MVKKWQTMIEAHvDVKTTDGYLLRLFCVGFTKKR-- 146 elgkrPvVlLQHGLlasSsnWVvNl<-* ++ r+ + QH V + Rabbit4Lib 147 NNQIRKTSYAQH-------QQVRQI 164 Ribosomal_S3Ae: domain 1 of 1, from 12 to 222: score 520.5, E = 1.2e-152 *->kgKkgrKvkkVvDpFtrKdWYdIkAPnmFgnrnvGkTLvnrtqGtKi +gKkg+K kkVvDpF++KdWYd+kAP+mF++rn+GkTLv+rtqGtKi Rabbit4Lib 12 GGKKGAK-KKVVDPFSKKDWYDVKAPAMFNIRNIGKTLVTRTQGTKI 57 AsdgLkGRvfEvsLaDLqgDpseehsfrKlkLkvedVqGknalTnFhGmd AsdgLkGRvfEvsLaDLq+D e +frK+kL++edVqGkn+lTnFhGmd Rabbit4Lib 58 ASDGLKGRVFEVSLADLQND---EVAFRKFKLITEDVQGKNCLTNFHGMD 104 lTtDklrSlvRkwqSlIEAivdVkTtDGYkLRvfaiafTkkranqvKkts lT+Dk++S+v+kwq++IEA+vdVkTtDGY+LR+f+++fTkkr+nq++kts Rabbit4Lib 105 LTRDKMCSMVKKWQTMIEAHVDVKTTDGYLLRLFCVGFTKKRNNQIRKTS 154 YAqssqiraIRkkMeeiikeeasekdlkqlVqklipgsIakeIekackkI YAq++q+r+IRkkM+ei+++e++++dlk++V+klip+sI+k+Iekac++I Rabbit4Lib 155 YAQHQQVRQIRKKMMEIMTREVQTNDLKEVVNKLIPDSIGKDIEKACQSI 204 YPLqnVeIrKvkvLkePk<-* YPL++V++rKvk+Lk+Pk Rabbit4Lib 205 YPLHDVFVRKVKMLKKPK 222 // Query: Rabbit4Lib.10.C4 588 36 662 nseq=2; translated Scores for sequence family classification (score includes all domains): Model Description Score E-value N -------- ----------- ----- ------- --- Ribosomal_S3Ae Ribosomal S3Ae family 341.9 7.3e-99 1 Abhydro_lipase ab-hydrolase associated lipase region -17.9 2.7 1 Parsed for domains: Model Domain seq-f seq-t hmm-f hmm-t score E-value -------- ------- ----- ----- ----- ----- ----- ------- Abhydro_lipase 1/1 48 108 .. 1 71 [] -17.9 2.7 Ribosomal_S3Ae 1/1 1 166 [. 1 215 [] 341.9 7.3e-99 Alignments of top-scoring domains: Abhydro_lipase: domain 1 of 1, from 48 to 108: score -17.9, E = 2.7 *->idpeanlnvsqlIekwGYpsEeH.tVtTeDGYILtLhRIpkgkknkt + + ++ + +kw E+H V T+DGY+L L + + kk+ Rabbit4Lib 48 DLTRDKMCS--MVKKWQTMIEAHvDVKTTDGYLLRLFCVGFTKKR-- 90 elgkrPvVlLQHGLlasSsnWVvNl<-* ++ r+ + QH V + Rabbit4Lib 91 NNQIRKTSYAQH-------QQVRQI 108 Ribosomal_S3Ae: domain 1 of 1, from 1 to 166: score 341.9, E = 7.3e-99 *->kgKkgrKvkkVvDpFtrKdWYdIkAPnmFgnrnvGkTLvnrtqGtKi i Rabbit4Lib 1 ----------------------------------------------I 1 AsdgLkGRvfEvsLaDLqgDpseehsfrKlkLkvedVqGknalTnFhGmd AsdgLkGRvfEvsLaDLq+D e +frK+kL++edVqGkn+lTnFhGmd Rabbit4Lib 2 ASDGLKGRVFEVSLADLQND---EVAFRKFKLITEDVQGKNCLTNFHGMD 48 lTtDklrSlvRkwqSlIEAivdVkTtDGYkLRvfaiafTkkranqvKkts lT+Dk++S+v+kwq++IEA+vdVkTtDGY+LR+f+++fTkkr+nq++kts Rabbit4Lib 49 LTRDKMCSMVKKWQTMIEAHVDVKTTDGYLLRLFCVGFTKKRNNQIRKTS 98 YAqssqiraIRkkMeeiikeeasekdlkqlVqklipgsIakeIekackkI YAq++q+r+IRkkM+ei+++e++++dlk++V+klip+sI+k+Iekac++I Rabbit4Lib 99 YAQHQQVRQIRKKMMEIMTREVQTNDLKEVVNKLIPDSIGKDIEKACQSI 148 YPLqnVeIrKvkvLkePk<-* YPL++V++rKvk+Lk+Pk Rabbit4Lib 149 YPLHDVFVRKVKMLKKPK 166 // Query: Rabbit4Lib.10.C5 515 1 691 nseq=4; translated Scores for sequence family classification (score includes all domains): Model Description Score E-value N -------- ----------- ----- ------- --- Ribosomal_S3Ae Ribosomal S3Ae family 408.0 9e-119 1 Abhydro_lipase ab-hydrolase associated lipase region -17.9 2.7 1 Parsed for domains: Model Domain seq-f seq-t hmm-f hmm-t score E-value -------- ------- ----- ----- ----- ----- ----- ------- Abhydro_lipase 1/1 70 130 .. 1 71 [] -17.9 2.7 Ribosomal_S3Ae 1/1 3 188 .. 1 215 [] 408.0 9e-119 Alignments of top-scoring domains: Abhydro_lipase: domain 1 of 1, from 70 to 130: score -17.9, E = 2.7 *->idpeanlnvsqlIekwGYpsEeH.tVtTeDGYILtLhRIpkgkknkt + + ++ + +kw E+H V T+DGY+L L + + kk+ Rabbit4Lib 70 DLTRDKMCS--MVKKWQTMIEAHvDVKTTDGYLLRLFCVGFTKKR-- 112 elgkrPvVlLQHGLlasSsnWVvNl<-* ++ r+ + QH V + Rabbit4Lib 113 NNQIRKTSYAQH-------QQVRQI 130 Ribosomal_S3Ae: domain 1 of 1, from 3 to 188: score 408.0, E = 9e-119 *->kgKkgrKvkkVvDpFtrKdWYdIkAPnmFgnrnvGkTLvnrtqGtKi + + ++rn+GkTLv+rtqGtKi Rabbit4Lib 3 ----RVR----------------------NIRNIGKTLVTRTQGTKI 23 AsdgLkGRvfEvsLaDLqgDpseehsfrKlkLkvedVqGknalTnFhGmd AsdgLkGRvfEvsLaDLq+D e +frK+kL++edVqGkn+lTnFhGmd Rabbit4Lib 24 ASDGLKGRVFEVSLADLQND---EVAFRKFKLITEDVQGKNCLTNFHGMD 70 lTtDklrSlvRkwqSlIEAivdVkTtDGYkLRvfaiafTkkranqvKkts lT+Dk++S+v+kwq++IEA+vdVkTtDGY+LR+f+++fTkkr+nq++kts Rabbit4Lib 71 LTRDKMCSMVKKWQTMIEAHVDVKTTDGYLLRLFCVGFTKKRNNQIRKTS 120 YAqssqiraIRkkMeeiikeeasekdlkqlVqklipgsIakeIekackkI YAq++q+r+IRkkM+ei+++e++++dlk++V+klip+sI+k+Iekac++I Rabbit4Lib 121 YAQHQQVRQIRKKMMEIMTREVQTNDLKEVVNKLIPDSIGKDIEKACQSI 170 YPLqnVeIrKvkvLkePk<-* YPL++V++rKvk+Lk+Pk Rabbit4Lib 171 YPLHDVFVRKVKMLKKPK 188 // Query: Rabbit4Lib.10.C6 222 1 267 nseq=2; minus strand; translated Scores for sequence family classification (score includes all domains): Model Description Score E-value N -------- ----------- ----- ------- --- [no hits above thresholds] Parsed for domains: Model Domain seq-f seq-t hmm-f hmm-t score E-value -------- ------- ----- ----- ----- ----- ----- ------- [no hits above thresholds] Alignments of top-scoring domains: [no hits above thresholds] // Query: Rabbit4Lib.11.C1 1091 29 1247 nseq=2; minus strand; translated Scores for sequence family classification (score includes all domains): Model Description Score E-value N -------- ----------- ----- ------- --- [no hits above thresholds] Parsed for domains: Model Domain seq-f seq-t hmm-f hmm-t score E-value -------- ------- ----- ----- ----- ----- ----- ------- [no hits above thresholds] Alignments of top-scoring domains: [no hits above thresholds] // Query: Rabbit4Lib.12.C1 768 1 588 nseq=3; minus strand; translated Scores for sequence family classification (score includes all domains): Model Description Score E-value N -------- ----------- ----- ------- --- [no hits above thresholds] Parsed for domains: Model Domain seq-f seq-t hmm-f hmm-t score E-value -------- ------- ----- ----- ----- ----- ----- ------- [no hits above thresholds] Alignments of top-scoring domains: [no hits above thresholds] // Query: Rabbit4Lib.13.C1 244 676 871 nseq=2; minus strand; translated Scores for sequence family classification (score includes all domains): Model Description Score E-value N -------- ----------- ----- ------- --- [no hits above thresholds] Parsed for domains: Model Domain seq-f seq-t hmm-f hmm-t score E-value -------- ------- ----- ----- ----- ----- ----- ------- [no hits above thresholds] Alignments of top-scoring domains: [no hits above thresholds] // Query: Rabbit4Lib.16.C1 917 34 795 nseq=2; translated Scores for sequence family classification (score includes all domains): Model Description Score E-value N -------- ----------- ----- ------- --- [no hits above thresholds] Parsed for domains: Model Domain seq-f seq-t hmm-f hmm-t score E-value -------- ------- ----- ----- ----- ----- ----- ------- [no hits above thresholds] Alignments of top-scoring domains: [no hits above thresholds] // Query: Rabbit4Lib.16.C2 560 1 435 nseq=6; translated Scores for sequence family classification (score includes all domains): Model Description Score E-value N -------- ----------- ----- ------- --- [no hits above thresholds] Parsed for domains: Model Domain seq-f seq-t hmm-f hmm-t score E-value -------- ------- ----- ----- ----- ----- ----- ------- [no hits above thresholds] Alignments of top-scoring domains: [no hits above thresholds] // Query: Rabbit4Lib.16.C4 875 94 721 nseq=2; minus strand; translated Scores for sequence family classification (score includes all domains): Model Description Score E-value N -------- ----------- ----- ------- --- [no hits above thresholds] Parsed for domains: Model Domain seq-f seq-t hmm-f hmm-t score E-value -------- ------- ----- ----- ----- ----- ----- ------- [no hits above thresholds] Alignments of top-scoring domains: [no hits above thresholds] // Query: Rabbit4Lib.17.C1 764 1 664 nseq=4; minus strand; translated Scores for sequence family classification (score includes all domains): Model Description Score E-value N -------- ----------- ----- ------- --- GST_C Glutathione S-transferase, C-terminal domain 114.9 1.5e-30 1 GST_N Glutathione S-transferase, N-terminal domain 95.0 1.5e-24 1 Parsed for domains: Model Domain seq-f seq-t hmm-f hmm-t score E-value -------- ------- ----- ----- ----- ----- ----- ------- GST_N 1/1 12 89 .. 1 84 [] 95.0 1.5e-24 GST_C 1/1 99 199 .. 1 111 [] 114.9 1.5e-30 Alignments of top-scoring domains: GST_N: domain 1 of 1, from 12 to 89: score 95.0, E = 1.5e-24 *->lklfngrgspraervrillalekGveyeivrvdleagehksNrpefl l+++++rg +a+++r+ll+ ++ +ye++r++++ +++++ r+++l Rabbit4Lib 12 LGYWDIRG--LAHAIRLLLE-FTDTCYEEKRYTCGEAPDYD-RSQWL 54 klnPlm.LpfgqvPaLvdgdGdgkkltESrAIarYlar<-* ++++++L+f+++P+L dg +k+t+S+AI+rY+ar Rabbit4Lib 55 DVKFKLdLDFPNLPYLMDG---NNKITQSNAILRYIAR 89 GST_C: domain 1 of 1, from 99 to 199: score 114.9, E = 1.5e-30 *->aerarwdmiedsrfrdlrldaawlpygkpefaekdeeeveealekll +e++r+d+ e+ +++d r+++++l+y +++ ek ++ ++e+l+ l Rabbit4Lib 99 EEKIRVDIMEN-QIMDFRMQLVRLCYNSDH--EKMKPQYLEQLPGQL 142 kvlealeeeLkghgkkylvGdkltlADialfpaldwlerldpdplwreey k+++ ++++++ +++G+klt++D++ +++ld+ ++++p++l +e+ Rabbit4Lib 143 KQFSLFLGKYS-----WFAGEKLTFVDFLTYDVLDQNRMFEPKCL--DEF 185 PnLkawrkrvaarp<-* PnLka++ r++a++ Rabbit4Lib 186 PNLKAFMCRFEALE 199 // Query: Rabbit4Lib.17.C2 865 42 698 nseq=2; minus strand; translated Scores for sequence family classification (score includes all domains): Model Description Score E-value N -------- ----------- ----- ------- --- GST_C Glutathione S-transferase, C-terminal domain 114.9 1.5e-30 1 GST_N Glutathione S-transferase, N-terminal domain 95.0 1.5e-24 1 Parsed for domains: Model Domain seq-f seq-t hmm-f hmm-t score E-value -------- ------- ----- ----- ----- ----- ----- ------- GST_N 1/1 9 86 .. 1 84 [] 95.0 1.5e-24 GST_C 1/1 96 196 .. 1 111 [] 114.9 1.5e-30 Alignments of top-scoring domains: GST_N: domain 1 of 1, from 9 to 86: score 95.0, E = 1.5e-24 *->lklfngrgspraervrillalekGveyeivrvdleagehksNrpefl l+++++rg +a+++r+ll+ ++ +ye++r++++ +++++ r+++l Rabbit4Lib 9 LGYWDIRG--LAHAIRLLLE-FTDTCYEEKRYTCGEAPDYD-RSQWL 51 klnPlm.LpfgqvPaLvdgdGdgkkltESrAIarYlar<-* ++++++L+f+++P+L dg +k+t+S+AI+rY+ar Rabbit4Lib 52 DVKFKLdLDFPNLPYLMDG---NNKITQSNAILRYIAR 86 GST_C: domain 1 of 1, from 96 to 196: score 114.9, E = 1.5e-30 *->aerarwdmiedsrfrdlrldaawlpygkpefaekdeeeveealekll +e++r+d+ e+ +++d r+++++l+y +++ ek ++ ++e+l+ l Rabbit4Lib 96 EEKIRVDIMEN-QIMDFRMQLVRLCYNSDH--EKMKPQYLEQLPGQL 139 kvlealeeeLkghgkkylvGdkltlADialfpaldwlerldpdplwreey k+++ ++++++ +++G+klt++D++ +++ld+ ++++p++l +e+ Rabbit4Lib 140 KQFSLFLGKYS-----WFAGEKLTFVDFLTYDVLDQNRMFEPKCL--DEF 182 PnLkawrkrvaarp<-* PnLka++ r++a++ Rabbit4Lib 183 PNLKAFMCRFEALE 196 // Query: Rabbit4Lib.19.C1 762 35 732 nseq=7; minus strand; translated Scores for sequence family classification (score includes all domains): Model Description Score E-value N -------- ----------- ----- ------- --- Ribosomal_L10e Ribosomal L10 467.2 1.4e-136 1 Ribosomal_L16 Ribosomal protein L16 -44.1 0.16 1 Parsed for domains: Model Domain seq-f seq-t hmm-f hmm-t score E-value -------- ------- ----- ----- ----- ----- ----- ------- Ribosomal_L16 1/1 17 166 .. 1 132 [] -44.1 0.16 Ribosomal_L10e 1/1 1 176 [. 1 176 [] 467.2 1.4e-136 Alignments of top-scoring domains: Ribosomal_L16: domain 1 of 1, from 17 to 166: score -44.1, E = 0.16 *->MLsPKRtKFRK...qhkgRm..kGkakrgtqihFGkfGLka.lepaw +PK +F ++ + k+R + G++k ++ F G + + e + Rabbit4Lib 17 --YPK-SRFCRgvpDAKIRIfdLGRKK-AKVDEFPLCGHMVsDEYEQ 59 ItarQIEAaRrAItRyvkRgG.....kiWiRvFPd......kpvTiKPaE ++++++EAaR+ + y+ + +++++ +i +R+ P++ + +k+++ +a+ Rabbit4Lib 60 LSSEALEAARICANKYMVKSCgkdgfHIRVRLHPFhvirinKMLSCAGAD 109 ...vRMGsGKGnpeyWVavVkpGkILFEidG..VseevAreAlrlAasKL + ++ M G p++ Va+V+ G+++ i + ++e eAlr A +K Rabbit4Lib 110 rlqTGMRGAFGKPQGTVARVHIGQVIMSIRTklQNKEHVVEALRRAKFKF 159 PiktkFV<-* P + k+ Rabbit4Lib 160 PGRQKIH 166 Ribosomal_L10e: domain 1 of 1, from 1 to 176: score 467.2, E = 1.4e-136 *->MaRRPARCYRyiknkPYpksrYcrGVPdaKiRiFDlGnkkanvDeFP M+RRPARCYRy+knkPYpksr+crGVPdaKiRiFDlG+kka+vDeFP Rabbit4Lib 1 MGRRPARCYRYCKNKPYPKSRFCRGVPDAKIRIFDLGRKKAKVDEFP 47 lcvhLVsnEreqisseALEAARiaANKYmvknaGkdgyhLrvRvhPFHvl lc h+Vs E+eq+sseALEAARi+ANKYmvk +Gkdg+h+rvR hPFHv+ Rabbit4Lib 48 LCGHMVSDEYEQLSSEALEAARICANKYMVKSCGKDGFHIRVRLHPFHVI 97 RinKMlsCAGADRLqqGMRgAFGKPqGlaARVkiGqillSVrvkpehfav RinKMlsCAGADRLq+GMRgAFGKPqG++ARV iGq+++S+r+k +++++ Rabbit4Lib 98 RINKMLSCAGADRLQTGMRGAFGKPQGTVARVHIGQVIMSIRTKLQNKEH 147 AkEALRRAayKfPgrqkIvvskkwgftkl<-* ++EALRRA++KfPgrqkI +skkwgftk Rabbit4Lib 148 VVEALRRAKFKFPGRQKIHISKKWGFTKF 176 // Query: Rabbit4Lib.19.C3 757 38 733 nseq=3; minus strand; translated Scores for sequence family classification (score includes all domains): Model Description Score E-value N -------- ----------- ----- ------- --- Ribosomal_L10e Ribosomal L10 467.2 1.4e-136 1 Ribosomal_L16 Ribosomal protein L16 -44.1 0.16 1 Parsed for domains: Model Domain seq-f seq-t hmm-f hmm-t score E-value -------- ------- ----- ----- ----- ----- ----- ------- Ribosomal_L16 1/1 17 166 .. 1 132 [] -44.1 0.16 Ribosomal_L10e 1/1 1 176 [. 1 176 [] 467.2 1.4e-136 Alignments of top-scoring domains: Ribosomal_L16: domain 1 of 1, from 17 to 166: score -44.1, E = 0.16 *->MLsPKRtKFRK...qhkgRm..kGkakrgtqihFGkfGLka.lepaw +PK +F ++ + k+R + G++k ++ F G + + e + Rabbit4Lib 17 --YPK-SRFCRgvpDAKIRIfdLGRKK-AKVDEFPLCGHMVsDEYEQ 59 ItarQIEAaRrAItRyvkRgG.....kiWiRvFPd......kpvTiKPaE ++++++EAaR+ + y+ + +++++ +i +R+ P++ + +k+++ +a+ Rabbit4Lib 60 LSSEALEAARICANKYMVKSCgkdgfHIRVRLHPFhvirinKMLSCAGAD 109 ...vRMGsGKGnpeyWVavVkpGkILFEidG..VseevAreAlrlAasKL + ++ M G p++ Va+V+ G+++ i + ++e eAlr A +K Rabbit4Lib 110 rlqTGMRGAFGKPQGTVARVHIGQVIMSIRTklQNKEHVVEALRRAKFKF 159 PiktkFV<-* P + k+ Rabbit4Lib 160 PGRQKIH 166 Ribosomal_L10e: domain 1 of 1, from 1 to 176: score 467.2, E = 1.4e-136 *->MaRRPARCYRyiknkPYpksrYcrGVPdaKiRiFDlGnkkanvDeFP M+RRPARCYRy+knkPYpksr+crGVPdaKiRiFDlG+kka+vDeFP Rabbit4Lib 1 MGRRPARCYRYCKNKPYPKSRFCRGVPDAKIRIFDLGRKKAKVDEFP 47 lcvhLVsnEreqisseALEAARiaANKYmvknaGkdgyhLrvRvhPFHvl lc h+Vs E+eq+sseALEAARi+ANKYmvk +Gkdg+h+rvR hPFHv+ Rabbit4Lib 48 LCGHMVSDEYEQLSSEALEAARICANKYMVKSCGKDGFHIRVRLHPFHVI 97 RinKMlsCAGADRLqqGMRgAFGKPqGlaARVkiGqillSVrvkpehfav RinKMlsCAGADRLq+GMRgAFGKPqG++ARV iGq+++S+r+k +++++ Rabbit4Lib 98 RINKMLSCAGADRLQTGMRGAFGKPQGTVARVHIGQVIMSIRTKLQNKEH 147 AkEALRRAayKfPgrqkIvvskkwgftkl<-* ++EALRRA++KfPgrqkI +skkwgftk Rabbit4Lib 148 VVEALRRAKFKFPGRQKIHISKKWGFTKF 176 // Query: Rabbit4Lib.22.C1 677 1 711 nseq=5; minus strand; translated Scores for sequence family classification (score includes all domains): Model Description Score E-value N -------- ----------- ----- ------- --- Ribosomal_L19e Ribosomal protein L19e 258.0 1.3e-73 1 E-MAP-115 E-MAP-115 family -94.5 2.3 1 Parsed for domains: Model Domain seq-f seq-t hmm-f hmm-t score E-value -------- ------- ----- ----- ----- ----- ----- ------- Ribosomal_L19e 1/1 13 159 .. 1 148 [] 258.0 1.3e-73 E-MAP-115 1/1 80 215 .. 1 193 [] -94.5 2.3 Alignments of top-scoring domains: Ribosomal_L19e: domain 1 of 1, from 13 to 159: score 258.0, E = 1.3e-73 *->mdLslQKRLAAsVLkcGkkrVWlDPnelneiamAnSRddIRkLIkdG ++L+lQKRLA+sVL+cGkk+VWlDPne+neia+AnSR++I kLIkdG Rabbit4Lib 13 SMLRLQKRLASSVLRCGKKKVWLDPNETNEIANANSRQQIQKLIKDG 59 lIvkKpvkvhSraRaRehqearrkGrhkGaGsRkGtagARlPsKelWmrR lI++Kpv+vhSraR+R+++ arrkGrh+G s kGta+A + + Rabbit4Lib 60 LIIRKPVTVHSRARCRKNTLARRKGRHMGKVS-KGTANAXDAGEGDLDEE 108 iRvLRrlLkklRdsgKIdrhlYrkLYrkaKGnaFkskrhLveYIkkhkad rlL+++R+s+KIdrh+Y++LY+k+KGn+Fk+kr+L+e+I+k kad Rabbit4Lib 109 DADFGRLLRRYRESKKIDRHMYHSLYLKVKGNVFKNKRILMEHIHKLKAD 158 k<-* k Rabbit4Lib 159 K 159 E-MAP-115: domain 1 of 1, from 80 to 215: score -94.5, E = 2.3 *->APgkaensaAlsKptAGTTDaeEAtrLLAEKRRqAReQrEkEEqERr A k sK tA Da+E L E R+ r r Rabbit4Lib 80 ARRKGRHMGKVSKGTANAXDAGE-GDLDEEDADFGRLLRRY-----R 120 eqeErdrrkREElkrra.....aEeRtlrrEeEARrrEeeraRekeekKK e dr + l +++++ R + e ++ +++aR k + Rabbit4Lib 121 ESKKIDRHMYHSLYLKVkgnvfKNKR--ILMEHIHKLKADKARKKLLA-- 166 qEGEEKRKAGEElkRkAEEeLLLKekrEqEeqErAmiqkQKEeAEaraRE q e+ r k KE+ Rabbit4Lib 167 ---------------------------DQAEARR---SKTKEA------- 179 eAErvRlEREkhfqqeEQERlERkKRLeEIMKRTRksevsekVKkeDske r R E ERl kK eEI K k e + k K+ D Rabbit4Lib 180 ---RKRRE----------ERLQAKK--EEIIKTLSKEEETKKXKRNDAPF 214 G<-* Rabbit4Lib 215 C 215 // Query: Rabbit4Lib.25.C1 1185 189 1096 nseq=2; minus strand; translated Scores for sequence family classification (score includes all domains): Model Description Score E-value N -------- ----------- ----- ------- --- CN_hydrolase Carbon-nitrogen hydrolase 18.2 2.4e-05 1 Parsed for domains: Model Domain seq-f seq-t hmm-f hmm-t score E-value -------- ------- ----- ----- ----- ----- ----- ------- CN_hydrolase 1/1 11 199 .. 1 224 [] 18.2 2.4e-05 Alignments of top-scoring domains: CN_hydrolase: domain 1 of 1, from 11 to 199: score 18.2, E = 2.4e-05 *->rvAlvQngnipqalpwaedleanlqkalelieeAakklpgAdLvvfP Al + +n++ +++ ++ Aak+ gA ++v P Rabbit4Lib 11 --ALLL-----------M--NKNIDVLEKVVKLAAKQ--GAHIIVTP 40 ElfipGYPrfyhiwtgspafgyrqdleeyrelaeel........dgeelq E i+ +i+t + + y ++ + +++ + + +++++ + +++ + Rabbit4Lib 41 EDGIY-----GWIFTRESIYPYL-EDIPDPKVNWIPcrdpkrfgYSPVQE 84 rlsalArkngialvaGiiere..gdglynhr.....lYNtavlidpdGfe rls+lAr+n i++va i + + ++++ +++++++ YNt v++d+ G Rabbit4Lib 85 RLSCLARDNSIYVVANIGDKKpcNASDPQCPpdgryQYNTDVVFDSGG-- 132 ylkllgkYRKlHLfdvgepplteflrplakvfnrEsstfgpGdgsqpepv kl+++Y+K Lf + ++ f+ ++ Rabbit4Lib 133 --KLVARYHKYNLFAP-----------------EIQFDFPKDSELV---- 159 fdTvvetpggklGllICyeirfPelaralalk.GAeilvnpsa<-* ++tp+gk+G+ C +i+ a + + ++ +++p+a Rabbit4Lib 160 ---TFDTPFGKFGIFTCFDIFSRDPAVVVVDEfQVDSILYPTA 199 // Query: Rabbit4Lib.25.C2 732 26 883 nseq=4; minus strand; translated Scores for sequence family classification (score includes all domains): Model Description Score E-value N -------- ----------- ----- ------- --- [no hits above thresholds] Parsed for domains: Model Domain seq-f seq-t hmm-f hmm-t score E-value -------- ------- ----- ----- ----- ----- ----- ------- [no hits above thresholds] Alignments of top-scoring domains: [no hits above thresholds] // Query: Rabbit4Lib.26.C1 687 44 702 nseq=2; minus strand; translated Scores for sequence family classification (score includes all domains): Model Description Score E-value N -------- ----------- ----- ------- --- [no hits above thresholds] Parsed for domains: Model Domain seq-f seq-t hmm-f hmm-t score E-value -------- ------- ----- ----- ----- ----- ----- ------- [no hits above thresholds] Alignments of top-scoring domains: [no hits above thresholds] // Query: Rabbit4Lib.27.C1 146 1 118 nseq=10; minus strand; translated Scores for sequence family classification (score includes all domains): Model Description Score E-value N -------- ----------- ----- ------- --- Ribosomal_L41 Ribosomal protein L41 23.1 0.0064 1 Parsed for domains: Model Domain seq-f seq-t hmm-f hmm-t score E-value -------- ------- ----- ----- ----- ----- ----- ------- Ribosomal_L41 1/1 15 39 .] 1 25 [] 23.1 0.0064 Alignments of top-scoring domains: Ribosomal_L41: domain 1 of 1, from 15 to 39: score 23.1, E = 0.0064 *->mrakwkkKRvRRLkRKRRKmRaRsK<-* mrakw+kKR+RRLkR ++K +RsK Rabbit4Lib 15 MRAKWRKKRMRRLKRXKKKDEKRSK 39 // Query: Rabbit4Lib.27.C2 165 1 126 nseq=3; minus strand; translated Scores for sequence family classification (score includes all domains): Model Description Score E-value N -------- ----------- ----- ------- --- Ribosomal_L41 Ribosomal protein L41 22.4 0.011 1 Parsed for domains: Model Domain seq-f seq-t hmm-f hmm-t score E-value -------- ------- ----- ----- ----- ----- ----- ------- Ribosomal_L41 1/1 17 41 .] 1 25 [] 22.4 0.011 Alignments of top-scoring domains: Ribosomal_L41: domain 1 of 1, from 17 to 41: score 22.4, E = 0.011 *->mrakwkkKRvRRLkRKRRKmRaRsK<-* ++akw+kKR+RRLkR ++K +RsK Rabbit4Lib 17 LGAKWRKKRMRRLKRXKKKDEKRSK 41 // Query: Rabbit4Lib.27.C3 140 1 103 nseq=2; minus strand; translated Scores for sequence family classification (score includes all domains): Model Description Score E-value N -------- ----------- ----- ------- --- Ribosomal_L41 Ribosomal protein L41 23.1 0.0064 1 Parsed for domains: Model Domain seq-f seq-t hmm-f hmm-t score E-value -------- ------- ----- ----- ----- ----- ----- ------- Ribosomal_L41 1/1 10 34 .] 1 25 [] 23.1 0.0064 Alignments of top-scoring domains: Ribosomal_L41: domain 1 of 1, from 10 to 34: score 23.1, E = 0.0064 *->mrakwkkKRvRRLkRKRRKmRaRsK<-* mrakw+kKR+RRLkR ++K +RsK Rabbit4Lib 10 MRAKWRKKRMRRLKRXKKKDEKRSK 34 // Query: Rabbit4Lib.28.C1 417 1 611 nseq=2; minus strand; translated Scores for sequence family classification (score includes all domains): Model Description Score E-value N -------- ----------- ----- ------- --- Ribosomal_S7e Ribosomal protein S7e 439.0 4.1e-128 1 Parsed for domains: Model Domain seq-f seq-t hmm-f hmm-t score E-value -------- ------- ----- ----- ----- ----- ----- ------- Ribosomal_S7e 1/1 13 203 .] 1 192 [] 439.0 4.1e-128 Alignments of top-scoring domains: Ribosomal_S7e: domain 1 of 1, from 13 to 203: score 439.0, E = 4.1e-128 *->asaKIvKagseePdefelqiaQAlleLEmnSkdLkaeLReLqitsar saKIvK+++e+Pdefe++i+QAlleLEmnS dLka+LReL+it+a+ Rabbit4Lib 13 SSAKIVKPNGEKPDEFESGISQALLELEMNS-DLKAQLRELNITAAK 58 EievgGgkKAiiifVPvPklkaFqKvQtrLvRELEKKFsdkHVvFiAeRr EievgGg+KAiiifVPvP+lk+FqK+Q+rLvRELEKKFs+kHVvFiA+Rr Rabbit4Lib 59 EIEVGGGRKAIIIFVPVPQLKSFQKIQVRLVRELEKKFSGKHVVFIAQRR 108 ILPKPsrksRsknkQKRPRSRtLTaVhdaILEDLVFPtEIVGKRiRvklD ILPKP+ k k tLTaVhdaILEDLVFP+EIVGKRiRvklD Rabbit4Lib 109 ILPKPTEKAVRKISKSALGAXTLTAVHDAILEDLVFPSEIVGKRIRVKLD 158 GskliKVhLDkkdqntieyKvetFssVYkKLTGkdVtFEfPeetl<-* Gs+liKVhLDk++qn++e+KvetFs+VYkKLTGkdV FEfPe++l Rabbit4Lib 159 GSRLIKVHLDKAQQNNVEHKVETFSGVYKKLTGKDVNFEFPEFQL 203 // Query: Rabbit4Lib.28.C2 463 31 615 nseq=14; minus strand; translated Scores for sequence family classification (score includes all domains): Model Description Score E-value N -------- ----------- ----- ------- --- Ribosomal_S7e Ribosomal protein S7e 439.0 4.1e-128 1 Parsed for domains: Model Domain seq-f seq-t hmm-f hmm-t score E-value -------- ------- ----- ----- ----- ----- ----- ------- Ribosomal_S7e 1/1 4 194 .] 1 192 [] 439.0 4.1e-128 Alignments of top-scoring domains: Ribosomal_S7e: domain 1 of 1, from 4 to 194: score 439.0, E = 4.1e-128 *->asaKIvKagseePdefelqiaQAlleLEmnSkdLkaeLReLqitsar saKIvK+++e+Pdefe++i+QAlleLEmnS dLka+LReL+it+a+ Rabbit4Lib 4 SSAKIVKPNGEKPDEFESGISQALLELEMNS-DLKAQLRELNITAAK 49 EievgGgkKAiiifVPvPklkaFqKvQtrLvRELEKKFsdkHVvFiAeRr EievgGg+KAiiifVPvP+lk+FqK+Q+rLvRELEKKFs+kHVvFiA+Rr Rabbit4Lib 50 EIEVGGGRKAIIIFVPVPQLKSFQKIQVRLVRELEKKFSGKHVVFIAQRR 99 ILPKPsrksRsknkQKRPRSRtLTaVhdaILEDLVFPtEIVGKRiRvklD ILPKP+ k k tLTaVhdaILEDLVFP+EIVGKRiRvklD Rabbit4Lib 100 ILPKPTEKAVRKISKSALGAXTLTAVHDAILEDLVFPSEIVGKRIRVKLD 149 GskliKVhLDkkdqntieyKvetFssVYkKLTGkdVtFEfPeetl<-* Gs+liKVhLDk++qn++e+KvetFs+VYkKLTGkdV FEfPe++l Rabbit4Lib 150 GSRLIKVHLDKAQQNNVEHKVETFSGVYKKLTGKDVNFEFPEFQL 194 // Query: Rabbit4Lib.28.C3 424 1 609 nseq=4; minus strand; translated Scores for sequence family classification (score includes all domains): Model Description Score E-value N -------- ----------- ----- ------- --- Ribosomal_S7e Ribosomal protein S7e 439.0 4.1e-128 1 Parsed for domains: Model Domain seq-f seq-t hmm-f hmm-t score E-value -------- ------- ----- ----- ----- ----- ----- ------- Ribosomal_S7e 1/1 12 202 .] 1 192 [] 439.0 4.1e-128 Alignments of top-scoring domains: Ribosomal_S7e: domain 1 of 1, from 12 to 202: score 439.0, E = 4.1e-128 *->asaKIvKagseePdefelqiaQAlleLEmnSkdLkaeLReLqitsar saKIvK+++e+Pdefe++i+QAlleLEmnS dLka+LReL+it+a+ Rabbit4Lib 12 SSAKIVKPNGEKPDEFESGISQALLELEMNS-DLKAQLRELNITAAK 57 EievgGgkKAiiifVPvPklkaFqKvQtrLvRELEKKFsdkHVvFiAeRr EievgGg+KAiiifVPvP+lk+FqK+Q+rLvRELEKKFs+kHVvFiA+Rr Rabbit4Lib 58 EIEVGGGRKAIIIFVPVPQLKSFQKIQVRLVRELEKKFSGKHVVFIAQRR 107 ILPKPsrksRsknkQKRPRSRtLTaVhdaILEDLVFPtEIVGKRiRvklD ILPKP+ k k tLTaVhdaILEDLVFP+EIVGKRiRvklD Rabbit4Lib 108 ILPKPTEKAVRKISKSALGAXTLTAVHDAILEDLVFPSEIVGKRIRVKLD 157 GskliKVhLDkkdqntieyKvetFssVYkKLTGkdVtFEfPeetl<-* Gs+liKVhLDk++qn++e+KvetFs+VYkKLTGkdV FEfPe++l Rabbit4Lib 158 GSRLIKVHLDKAQQNNVEHKVETFSGVYKKLTGKDVNFEFPEFQL 202 // Query: Rabbit4Lib.28.C4 356 1 589 nseq=2; minus strand; translated Scores for sequence family classification (score includes all domains): Model Description Score E-value N -------- ----------- ----- ------- --- Ribosomal_S7e Ribosomal protein S7e 439.0 4.1e-128 1 Parsed for domains: Model Domain seq-f seq-t hmm-f hmm-t score E-value -------- ------- ----- ----- ----- ----- ----- ------- Ribosomal_S7e 1/1 6 196 .] 1 192 [] 439.0 4.1e-128 Alignments of top-scoring domains: Ribosomal_S7e: domain 1 of 1, from 6 to 196: score 439.0, E = 4.1e-128 *->asaKIvKagseePdefelqiaQAlleLEmnSkdLkaeLReLqitsar saKIvK+++e+Pdefe++i+QAlleLEmnS dLka+LReL+it+a+ Rabbit4Lib 6 SSAKIVKPNGEKPDEFESGISQALLELEMNS-DLKAQLRELNITAAK 51 EievgGgkKAiiifVPvPklkaFqKvQtrLvRELEKKFsdkHVvFiAeRr EievgGg+KAiiifVPvP+lk+FqK+Q+rLvRELEKKFs+kHVvFiA+Rr Rabbit4Lib 52 EIEVGGGRKAIIIFVPVPQLKSFQKIQVRLVRELEKKFSGKHVVFIAQRR 101 ILPKPsrksRsknkQKRPRSRtLTaVhdaILEDLVFPtEIVGKRiRvklD ILPKP+ k k tLTaVhdaILEDLVFP+EIVGKRiRvklD Rabbit4Lib 102 ILPKPTEKAVRKISKSALGAXTLTAVHDAILEDLVFPSEIVGKRIRVKLD 151 GskliKVhLDkkdqntieyKvetFssVYkKLTGkdVtFEfPeetl<-* Gs+liKVhLDk++qn++e+KvetFs+VYkKLTGkdV FEfPe++l Rabbit4Lib 152 GSRLIKVHLDKAQQNNVEHKVETFSGVYKKLTGKDVNFEFPEFQL 196 // Query: Rabbit4Lib.28.C5 224 1 450 nseq=2; minus strand; translated Scores for sequence family classification (score includes all domains): Model Description Score E-value N -------- ----------- ----- ------- --- Ribosomal_S7e Ribosomal protein S7e 276.6 3.2e-79 1 Parsed for domains: Model Domain seq-f seq-t hmm-f hmm-t score E-value -------- ------- ----- ----- ----- ----- ----- ------- Ribosomal_S7e 1/1 2 149 .] 1 192 [] 276.6 3.2e-79 Alignments of top-scoring domains: Ribosomal_S7e: domain 1 of 1, from 2 to 149: score 276.6, E = 3.2e-79 *->asaKIvKagseePdefelqiaQAlleLEmnSkdLkaeLReLqitsar ++r Rabbit4Lib 2 --------------------------------------------RVR 4 EievgGgkKAiiifVPvPklkaFqKvQtrLvRELEKKFsdkHVvFiAeRr EievgGg+KAiiifVPvP+lk+FqK+Q+rLvRELEKKFs+kHVvFiA+Rr Rabbit4Lib 5 EIEVGGGRKAIIIFVPVPQLKSFQKIQVRLVRELEKKFSGKHVVFIAQRR 54 ILPKPsrksRsknkQKRPRSRtLTaVhdaILEDLVFPtEIVGKRiRvklD ILPKP+ k k tLTaVhdaILEDLVFP+EIVGKRiRvklD Rabbit4Lib 55 ILPKPTEKAVRKISKSALGAXTLTAVHDAILEDLVFPSEIVGKRIRVKLD 104 GskliKVhLDkkdqntieyKvetFssVYkKLTGkdVtFEfPeetl<-* Gs+liKVhLDk++qn++e+KvetFs+VYkKLTGkdV FEfPe++l Rabbit4Lib 105 GSRLIKVHLDKAQQNNVEHKVETFSGVYKKLTGKDVNFEFPEFQL 149 // Query: Rabbit4Lib.28.C6 403 1 600 nseq=3; minus strand; translated Scores for sequence family classification (score includes all domains): Model Description Score E-value N -------- ----------- ----- ------- --- Ribosomal_S7e Ribosomal protein S7e 439.0 4.1e-128 1 DUF421 Protein of unknown function (DUF421) -55.1 5.9 1 Parsed for domains: Model Domain seq-f seq-t hmm-f hmm-t score E-value -------- ------- ----- ----- ----- ----- ----- ------- DUF421 1/1 3 99 .. 1 126 [] -55.1 5.9 Ribosomal_S7e 1/1 9 199 .] 1 192 [] 439.0 4.1e-128 Alignments of top-scoring domains: DUF421: domain 1 of 1, from 3 to 99: score -55.1, E = 5.9 *->lRklleGkPtvlIenGk............ideenLKKsrltiddLlm +R +++++++++ nG+++++ +++ ++ ++e ++++ dL Rabbit4Lib 3 VRAMFSSSAKIVKPNGEkpdefesgisqaLLELEMNS------DLKA 43 qLRekgifdisdVeyAILEtNGqLSVlkKpdkkplTkeDlnipvekrglp qLRe +i+ ++e + ++ k Rabbit4Lib 44 QLRELNITAAKEIEVG-------------GGRK----------------- 63 iplIlDGeiqeenLqkigkteeWLleeLkkqgiknisdvfl<-* +I+ + +L++ +k L eL+k+ + v++ Rabbit4Lib 64 -AIII--FVPVPQLKSFQKIQVRLVRELEKKFSG--KHVVF 99 Ribosomal_S7e: domain 1 of 1, from 9 to 199: score 439.0, E = 4.1e-128 *->asaKIvKagseePdefelqiaQAlleLEmnSkdLkaeLReLqitsar saKIvK+++e+Pdefe++i+QAlleLEmnS dLka+LReL+it+a+ Rabbit4Lib 9 SSAKIVKPNGEKPDEFESGISQALLELEMNS-DLKAQLRELNITAAK 54 EievgGgkKAiiifVPvPklkaFqKvQtrLvRELEKKFsdkHVvFiAeRr EievgGg+KAiiifVPvP+lk+FqK+Q+rLvRELEKKFs+kHVvFiA+Rr Rabbit4Lib 55 EIEVGGGRKAIIIFVPVPQLKSFQKIQVRLVRELEKKFSGKHVVFIAQRR 104 ILPKPsrksRsknkQKRPRSRtLTaVhdaILEDLVFPtEIVGKRiRvklD ILPKP+ k k tLTaVhdaILEDLVFP+EIVGKRiRvklD Rabbit4Lib 105 ILPKPTEKAVRKISKSALGAXTLTAVHDAILEDLVFPSEIVGKRIRVKLD 154 GskliKVhLDkkdqntieyKvetFssVYkKLTGkdVtFEfPeetl<-* Gs+liKVhLDk++qn++e+KvetFs+VYkKLTGkdV FEfPe++l Rabbit4Lib 155 GSRLIKVHLDKAQQNNVEHKVETFSGVYKKLTGKDVNFEFPEFQL 199 // Query: Rabbit4Lib.28.C7 370 1 526 nseq=2; minus strand; translated Scores for sequence family classification (score includes all domains): Model Description Score E-value N -------- ----------- ----- ------- --- Ribosomal_S7e Ribosomal protein S7e 375.9 4e-109 1 Parsed for domains: Model Domain seq-f seq-t hmm-f hmm-t score E-value -------- ------- ----- ----- ----- ----- ----- ------- Ribosomal_S7e 1/1 1 175 [] 1 192 [] 375.9 4e-109 Alignments of top-scoring domains: Ribosomal_S7e: domain 1 of 1, from 1 to 175: score 375.9, E = 4e-109 *->asaKIvKagseePdefelqiaQAlleLEmnSkdLkaeLReLqitsar aQAlleLEmnS dLka+LReL+it+a+ Rabbit4Lib 1 ----------------XHASAQALLELEMNS-DLKAQLRELNITAAK 30 EievgGgkKAiiifVPvPklkaFqKvQtrLvRELEKKFsdkHVvFiAeRr EievgGg+KAiiifVPvP+lk+FqK+Q+rLvRELEKKFs+kHVvFiA+Rr Rabbit4Lib 31 EIEVGGGRKAIIIFVPVPQLKSFQKIQVRLVRELEKKFSGKHVVFIAQRR 80 ILPKPsrksRsknkQKRPRSRtLTaVhdaILEDLVFPtEIVGKRiRvklD ILPKP+ k k tLTaVhdaILEDLVFP+EIVGKRiRvklD Rabbit4Lib 81 ILPKPTEKAVRKISKSALGAXTLTAVHDAILEDLVFPSEIVGKRIRVKLD 130 GskliKVhLDkkdqntieyKvetFssVYkKLTGkdVtFEfPeetl<-* Gs+liKVhLDk++qn++e+KvetFs+VYkKLTGkdV FEfPe++l Rabbit4Lib 131 GSRLIKVHLDKAQQNNVEHKVETFSGVYKKLTGKDVNFEFPEFQL 175 // Query: Rabbit4Lib.30.C1 522 1 682 nseq=4; minus strand; translated Scores for sequence family classification (score includes all domains): Model Description Score E-value N -------- ----------- ----- ------- --- DUF1692 Protein of unknown function (DUF1692) 318.0 1.1e-91 1 Parsed for domains: Model Domain seq-f seq-t hmm-f hmm-t score E-value -------- ------- ----- ----- ----- ----- ----- ------- DUF1692 1/1 2 199 .. 1 241 [] 318.0 1.1e-91 Alignments of top-scoring domains: DUF1692: domain 1 of 1, from 2 to 199: score 318.0, E = 1.1e-91 *->kdddgklieqckregfveklkkqkesneGCRiyGtleVNKVaGnFHi + ++ ++ +s ++CRi+G+l+VNKVaGnFHi Rabbit4Lib 2 HA-----------SALPPREDDSLQSPDACRIHGHLYVNKVAGNFHI 37 aPGssfhqsrihvHdlslyksysnlNfsHvInhLSFGkrvsppldgdvkk + G++++++r+h+H l+++ +++NfsH+I+hLSFG Rabbit4Lib 38 TVGKAIPHPRGHAHLAALVNH-DSYNFSHRIDHLSFG------------- 73 lldyppgivnPLDGtskitprrdehlvtyqYflKvVPTeyedlsskgevi + +pgi+nPLDGt+ki+ +h++++qYf+ +VPT+ +++ + ++ Rabbit4Lib 74 --ELVPGIINPLDGTEKIA---IDHNQMFQYFITIVPTKLHTY---KISA 115 eTnQYSVTeHerplqggrdedHpnTvhfrGGlPGvFFkYelSPlkViitE +T+Q+SVTe+er+++++ +++ G+ G+F+kY+lS l+V++tE Rabbit4Lib 116 DTHQFSVTERERIINHAAGSH---------GVSGIFMKYDLSSLMVTVTE 156 errstFshFltnlCAIIGGvftVAGilDriiyhaqraikkkklg<-* e+++ F++F+++lC I+GG+f +G+l+ i++ ++++i++++++ Rabbit4Lib 157 EHMP-FWQFFVRLCGIVGGIFSTTGMLHGIGKFIVEIICCRFRL 199 // Query: Rabbit4Lib.31.C1 1270 1 683 nseq=7; minus strand; translated Scores for sequence family classification (score includes all domains): Model Description Score E-value N -------- ----------- ----- ------- --- Ribosomal_L1 Ribosomal protein L1p/L10e family 357.5 1.4e-103 1 Parsed for domains: Model Domain seq-f seq-t hmm-f hmm-t score E-value -------- ------- ----- ----- ----- ----- ----- ------- Ribosomal_L1 1/1 15 223 .. 1 220 [] 357.5 1.4e-103 Alignments of top-scoring domains: Ribosomal_L1: domain 1 of 1, from 15 to 223: score 357.5, E = 1.4e-103 *->VDrsklYeaveAiellKetataKFdETVElavnLgidprkaPDQrvR V+r++lYeav++++++++++++KF ETVEl+++L+++++++ D+r++ Rabbit4Lib 15 VSRDTLYEAVREVLHGNQRKRRKFLETVELQISLKNYDPQK-DKRFS 60 gtVvLPhGTGKPevrVaVfAkGekakeAeeAGADvvGsEeLielikngra gtV+L ++T++P+++V+V++++++++eA++++++++++E+L++l+kn+++ Rabbit4Lib 61 GTVRL-KSTPRPKFSVCVLGDQQHCDEAKAVDIPHMDIEALKKLNKNKKL 109 aKkLAldFDvfIAtPDmMpliGrkLGrvLGPGLNKRGLMPsPKtGTVtad +KkLA+++D+f+A+++++++i+ r+LGPGLNK+G++Ps++t ++++ Rabbit4Lib 110 VKKLAKKYDAFLASESLIKQIP----RILGPGLNKAGKFPSLLT--HNEN 153 vaeaVnefKkGkvefRtdktgiiHvpvGKvsFsaEkLveNieAllealkk ++++V+e+K+ +++f+++k+ +++v+vG+v++++++Lv+Ni++++++l++ Rabbit4Lib 154 MVAKVDEVKS-TIKFQMKKVLCLAVAVGHVKMTDDELVYNIHLAVNFLVS 202 nkPsgaKGkyiKsvyiksTMGPs<-* +++++ +++++++yiksTMG++ Rabbit4Lib 203 LLKKN--WQNVRALYIKSTMGKP 223 // Query: Rabbit4Lib.31.C3 570 1 330 nseq=2; minus strand; translated Scores for sequence family classification (score includes all domains): Model Description Score E-value N -------- ----------- ----- ------- --- Ribosomal_L1 Ribosomal protein L1p/L10e family 18.8 9.3e-11 1 Parsed for domains: Model Domain seq-f seq-t hmm-f hmm-t score E-value -------- ------- ----- ----- ----- ----- ----- ------- Ribosomal_L1 1/1 1 105 [. 1 220 [] 18.8 9.3e-11 Alignments of top-scoring domains: Ribosomal_L1: domain 1 of 1, from 1 to 105: score 18.8, E = 9.3e-11 *->VDrsklYeaveAiellKetataKFdETVElavnLgidprkaPDQrvR pr + Rabbit4Lib 1 -------------------------------------PRVR------ 4 gtVvLPhGTGKPevrVaVfAkGekakeAeeAGADvvGsEeLielikngra Rabbit4Lib - -------------------------------------------------- - aKkLAldFDvfIAtPDmMpliGrkLGrvLGPGLNKRGLMPsPKtGTVtad +++++++i+ r+LGPGLNK+G++Ps++t ++++ Rabbit4Lib 5 -------------SESLIKQIP----RILGPGLNKAGKFPSLLT--HNEN 35 vaeaVnefKkGkvefRtdktgiiHvpvGKvsFsaEkLveNieAllealkk ++++V+e+K+ +++f+++k+ +++v+vG+v++++++Lv+Ni++++++l++ Rabbit4Lib 36 MVAKVDEVKS-TIKFQMKKVLCLAVAVGHVKMTDDELVYNIHLAVNFLVS 84 nkPsgaKGkyiKsvyiksTMGPs<-* +++++ +++++++yiksTMG++ Rabbit4Lib 85 LLKKN--WQNVRALYIKSTMGKP 105 // Query: Rabbit4Lib.33.C1 319 1 309 nseq=2; minus strand; translated Scores for sequence family classification (score includes all domains): Model Description Score E-value N -------- ----------- ----- ------- --- [no hits above thresholds] Parsed for domains: Model Domain seq-f seq-t hmm-f hmm-t score E-value -------- ------- ----- ----- ----- ----- ----- ------- [no hits above thresholds] Alignments of top-scoring domains: [no hits above thresholds] // Query: Rabbit4Lib.36.C1 410 64 411 nseq=2; minus strand; translated Scores for sequence family classification (score includes all domains): Model Description Score E-value N -------- ----------- ----- ------- --- Dpy-30 Dpy-30 motif 87.6 2.5e-22 1 RIIa Regulatory subunit of type II PKA R-subunit 1.6 1.7 1 Parsed for domains: Model Domain seq-f seq-t hmm-f hmm-t score E-value -------- ------- ----- ----- ----- ----- ----- ------- Dpy-30 1/1 52 93 .. 1 42 [] 87.6 2.5e-22 RIIa 1/1 62 93 .. 1 39 [] 1.6 1.7 Alignments of top-scoring domains: Dpy-30: domain 1 of 1, from 52 to 93: score 87.6, E = 2.5e-22 *->paRqYLnknvaPiLlqGLtelAkeRPeDPiefLAeyLlknnn<-* p+R+YL+++v+PiLlqGL+ lAkeRP++PiefLA+yLlkn++ Rabbit4Lib 52 PTRAYLDQTVVPILLQGLAVLAKERPPNPIEFLASYLLKNKA 93 RIIa: domain 1 of 1, from 62 to 93: score 1.6, E = 1.7 *->hglqaLLedltveVlraqPsDlvqFaadYFnekLeeqRa<-* + LL++l+v +++++P+++ +F+a+Y +++ a Rabbit4Lib 62 --VPILLQGLAV-LAKERPPNPIEFLASYL----LKNKA 93 // Query: Rabbit4Lib.41.C1 471 31 366 nseq=3; minus strand; translated Scores for sequence family classification (score includes all domains): Model Description Score E-value N -------- ----------- ----- ------- --- UCR_14kD Ubiquinol-cytochrome C reductase complex 14k 209.0 7.3e-59 1 Parsed for domains: Model Domain seq-f seq-t hmm-f hmm-t score E-value -------- ------- ----- ----- ----- ----- ----- ------- UCR_14kD 1/1 4 107 .. 1 106 [] 209.0 7.3e-59 Alignments of top-scoring domains: UCR_14kD: domain 1 of 1, from 4 to 107: score 209.0, E = 7.3e-59 *->ilrlpalskLlvpIakffinlSgYrklGLrfDDliheeYnpdvqeAL ++++ a+ ++l +I+k+++n++g++klGL++DD+ihe ++dv+eA+ Rabbit4Lib 4 RPAVAASGRWLDGIRKWYYNAAGFNKLGLMRDDTIHE--DEDVKEAI 48 rRLPreesyARvfRIlRAmqLslshhlLPkdqWtkpeeDipYLePYLlev rRLP+ ++ +RvfRI+RA++L ++h++LPk+qWtk+eeD+ YLePYL+ev Rabbit4Lib 49 RRLPEKLYNDRVFRIKRALDLTMRHQILPKEQWTKYEEDKFYLEPYLKEV 98 eaEakERee<-* ++E+kERee Rabbit4Lib 99 IRERKEREE 107 // Query: Rabbit4Lib.42.C1 207 1 322 nseq=2; minus strand; translated Scores for sequence family classification (score includes all domains): Model Description Score E-value N -------- ----------- ----- ------- --- ATP-synt_G Mitochondrial ATP synthase g subunit 178.8 8.7e-50 1 Parsed for domains: Model Domain seq-f seq-t hmm-f hmm-t score E-value -------- ------- ----- ----- ----- ----- ----- ------- ATP-synt_G 1/1 9 107 .] 1 120 [] 178.8 8.7e-50 Alignments of top-scoring domains: ATP-synt_G: domain 1 of 1, from 9 to 107: score 178.8, E = 8.7e-50 *->leslankasaLvskavtqqkkgrlailkaylkeelqPptYWpAdipa +++la+ka+aLv++avt++k+ rla+++ y+k+el+Ppt pA+ip+ Rabbit4Lib 9 VRNLAEKAPALVNAAVTYSKP-RLATFWHYAKVELVPPT--PAEIPT 52 ivqdlykiqkiakteSFWKEVNHvkglyknFllknLqvkEAllRnglval ++q+l+ki +a+t g++k +L+vkEA l nglva+ Rabbit4Lib 53 AIQSLKKIVHSAQT-----------GSFK-----QLTVKEAVL-NGLVAT 85 EvvgWFcvGEiIGRGRkIvGYkv<-* Ev++WF++GEiIG+ R+IvGY+v Rabbit4Lib 86 EVWMWFYIGEIIGK-RGIVGYNV 107 // Query: Rabbit4Lib.42.C2 307 53 364 nseq=3; minus strand; translated Scores for sequence family classification (score includes all domains): Model Description Score E-value N -------- ----------- ----- ------- --- ATP-synt_G Mitochondrial ATP synthase g subunit 178.8 8.7e-50 1 Parsed for domains: Model Domain seq-f seq-t hmm-f hmm-t score E-value -------- ------- ----- ----- ----- ----- ----- ------- ATP-synt_G 1/1 5 103 .] 1 120 [] 178.8 8.7e-50 Alignments of top-scoring domains: ATP-synt_G: domain 1 of 1, from 5 to 103: score 178.8, E = 8.7e-50 *->leslankasaLvskavtqqkkgrlailkaylkeelqPptYWpAdipa +++la+ka+aLv++avt++k+ rla+++ y+k+el+Ppt pA+ip+ Rabbit4Lib 5 VRNLAEKAPALVNAAVTYSKP-RLATFWHYAKVELVPPT--PAEIPT 48 ivqdlykiqkiakteSFWKEVNHvkglyknFllknLqvkEAllRnglval ++q+l+ki +a+t g++k +L+vkEA l nglva+ Rabbit4Lib 49 AIQSLKKIVHSAQT-----------GSFK-----QLTVKEAVL-NGLVAT 81 EvvgWFcvGEiIGRGRkIvGYkv<-* Ev++WF++GEiIG+ R+IvGY+v Rabbit4Lib 82 EVWMWFYIGEIIGK-RGIVGYNV 103 // Query: Rabbit4Lib.43.C1 832 58 988 nseq=3; minus strand; translated Scores for sequence family classification (score includes all domains): Model Description Score E-value N -------- ----------- ----- ------- --- Vps26 Vacuolar protein sorting-associated protei 645.3 3.3e-190 1 Arrestin_N Arrestin (or S-antigen), N-terminal domain -40.0 1.7 1 Parsed for domains: Model Domain seq-f seq-t hmm-f hmm-t score E-value -------- ------- ----- ----- ----- ----- ----- ------- Arrestin_N 1/1 12 133 .. 1 172 [] -40.0 1.7 Vps26 1/1 1 258 [. 1 404 [] 645.3 3.3e-190 Alignments of top-scoring domains: Arrestin_N: domain 1 of 1, from 12 to 133: score -40.0, E = 1.7 *->feiyldakpdpvYhpGlVetvsGrVll..DetkepikvravkitlkG + ++ ++ G e+vsG+V+l + + + +++i+++G Rabbit4Lib 12 -------EKHYLFYDG--ESVSGKVNLafKQPGKRLEHQGIRIEFVG 49 kartgWeeevrgrtfrkdlygeeeqvyptvnysgkveYldtqtrLwgked + + +++++ e +++ L Rabbit4Lib 50 QIELFND-----KSNTH-------------------EFVNLVKELAL--- 72 gvntLpaGthe....fPFsfeLPpncLPsSfeGqhGPDqGKpCgIrYevK +G+ ++++++ F+f+ + + S+ G rY++K Rabbit4Lib 73 ------PGELTqsrsYDFEFMQVEKP-YESYIGANV-------RLRYFLK 108 aelaestdRPrwkfdhkrkkvftVirkldln<-* +++ R d +++ + V + + Rabbit4Lib 109 VTI----VRR--LTDLVKEYDLIVHQLATYP 133 Vps26: domain 1 of 1, from 1 to 258: score 645.3, E = 3.3e-190 *->FGppidIeIkldneeeRKtVevktddGkkeknpvYedgEsvsGkVni ++e+kt+dGk+ek+++++dgEsvsGkVn+ Rabbit4Lib 1 ------------------MAEMKTEDGKVEKHYLFYDGESVSGKVNL 29 rlKdpgkKveHqGikiEfEGTVNLQLSAKSiGqIElfYDrGsGnssskkv ++K+pgk++eHqGi+iEf +GqIElf+D++ Rabbit4Lib 30 AFKQPGKRLEHQGIRIEF------------VGQIELFNDKS--------- 58 tsstsssssnGsvDvRkNhheqFtslvreLakPGeLtqnktEfpFEFsnV N+he F++lv+eLa PGeLtq+++ ++FEF++V Rabbit4Lib 59 -----------------NTHE-FVNLVKELALPGELTQSRS-YDFEFMQV 89 eKpSKVLYEsYnGvNVrLRYflRvTvvRklLAtDivKekDlwVhSAPQKG eKp YEsY+G+NVrLRYfl+vT+vR+l tD+vKe+Dl+Vh Rabbit4Lib 90 EKP----YESYIGANVRLRYFLKVTIVRRL--TDLVKEYDLIVH------ 127 KLTPSPVnfnsvttyPntLsanetkattnDiaGGnYaaDnasDntqtkst ++ +tyP Rabbit4Lib 128 -------QL---ATYP---------------------------------- 133 qGeaaetNqvLPishsnnePnsIKmeVGIEDCLHIEFEYnKsKYFiRGHL ++N nsIKmeVGIEDCLHIEFEYnKsKY HL Rabbit4Lib 134 -----DVN------------NSIKMEVGIEDCLHIEFEYNKSKY----HL 162 kDVNCAiTQPIvGkIYFLLVRHSDIKIkhMElalirrEstGtqgpntfte kDV IvGkIYFLLVR IKI+hMEl+li++E+tG+ gp+t+te Rabbit4Lib 163 KDV-------IVGKIYFLLVR---IKIQHMELQLIKKEITGI-GPSTTTE 201 sETiakfEIMDGaPVRGESIPiRlFLagYdLTPTmrdvnkKFsVkYfLNL +ETiak+EIMDGaPV+GESIPiRlFLagYd+TPTmrdvnkKFsV+YfLNL Rabbit4Lib 202 TETIAKYEIMDGAPVKGESIPIRLFLAGYDPTPTMRDVNKKFSVRYFLNL 251 VLvDEeD<-* VLvDEeD Rabbit4Lib 252 VLVDEED 258 // Query: Rabbit4Lib.45.C1 195 1 231 nseq=5; minus strand; translated Scores for sequence family classification (score includes all domains): Model Description Score E-value N -------- ----------- ----- ------- --- [no hits above thresholds] Parsed for domains: Model Domain seq-f seq-t hmm-f hmm-t score E-value -------- ------- ----- ----- ----- ----- ----- ------- [no hits above thresholds] Alignments of top-scoring domains: [no hits above thresholds] // Query: Rabbit4Lib.45.C2 567 56 536 nseq=4; minus strand; translated Scores for sequence family classification (score includes all domains): Model Description Score E-value N -------- ----------- ----- ------- --- Ribosomal_S24e Ribosomal protein S24e 194.0 2.4e-54 1 Parsed for domains: Model Domain seq-f seq-t hmm-f hmm-t score E-value -------- ------- ----- ----- ----- ----- ----- ------- Ribosomal_S24e 1/1 23 105 .. 1 84 [] 194.0 2.4e-54 Alignments of top-scoring domains: Ribosomal_S24e: domain 1 of 1, from 23 to 105: score 194.0, E = 2.4e-54 *->mVvdViHPGrATvsKdevReKLAamYnankDvvsVfgfrtqfGggkt mV+dV+HPG+ATv+K+e+ReKLA+mY++++Dv++Vfgfrt+fGggkt Rabbit4Lib 23 MVIDVLHPGKATVPKTEIREKLAKMYKTTPDVIFVFGFRTHFGGGKT 69 tGfakvYDnveyakkvEpkHrLeRnkLaeetkkesrk<-* tGf+++YD+++yakk+EpkHrL+R++L+e+ kk+srk Rabbit4Lib 70 TGFGMIYDSLDYAKKNEPKHRLARHGLYEK-KKTSRK 105 // Query: Rabbit4Lib.45.C3 554 40 520 nseq=10; minus strand; translated Scores for sequence family classification (score includes all domains): Model Description Score E-value N -------- ----------- ----- ------- --- Ribosomal_S24e Ribosomal protein S24e 194.0 2.4e-54 1 Parsed for domains: Model Domain seq-f seq-t hmm-f hmm-t score E-value -------- ------- ----- ----- ----- ----- ----- ------- Ribosomal_S24e 1/1 23 105 .. 1 84 [] 194.0 2.4e-54 Alignments of top-scoring domains: Ribosomal_S24e: domain 1 of 1, from 23 to 105: score 194.0, E = 2.4e-54 *->mVvdViHPGrATvsKdevReKLAamYnankDvvsVfgfrtqfGggkt mV+dV+HPG+ATv+K+e+ReKLA+mY++++Dv++Vfgfrt+fGggkt Rabbit4Lib 23 MVIDVLHPGKATVPKTEIREKLAKMYKTTPDVIFVFGFRTHFGGGKT 69 tGfakvYDnveyakkvEpkHrLeRnkLaeetkkesrk<-* tGf+++YD+++yakk+EpkHrL+R++L+e+ kk+srk Rabbit4Lib 70 TGFGMIYDSLDYAKKNEPKHRLARHGLYEK-KKTSRK 105 // Query: Rabbit4Lib.45.C4 544 39 516 nseq=4; minus strand; translated Scores for sequence family classification (score includes all domains): Model Description Score E-value N -------- ----------- ----- ------- --- Ribosomal_S24e Ribosomal protein S24e 194.0 2.4e-54 1 Parsed for domains: Model Domain seq-f seq-t hmm-f hmm-t score E-value -------- ------- ----- ----- ----- ----- ----- ------- Ribosomal_S24e 1/1 23 105 .. 1 84 [] 194.0 2.4e-54 Alignments of top-scoring domains: Ribosomal_S24e: domain 1 of 1, from 23 to 105: score 194.0, E = 2.4e-54 *->mVvdViHPGrATvsKdevReKLAamYnankDvvsVfgfrtqfGggkt mV+dV+HPG+ATv+K+e+ReKLA+mY++++Dv++Vfgfrt+fGggkt Rabbit4Lib 23 MVIDVLHPGKATVPKTEIREKLAKMYKTTPDVIFVFGFRTHFGGGKT 69 tGfakvYDnveyakkvEpkHrLeRnkLaeetkkesrk<-* tGf+++YD+++yakk+EpkHrL+R++L+e+ kk+srk Rabbit4Lib 70 TGFGMIYDSLDYAKKNEPKHRLARHGLYEK-KKTSRK 105 // Query: Rabbit4Lib.45.C6 150 1 169 nseq=2; minus strand; translated Scores for sequence family classification (score includes all domains): Model Description Score E-value N -------- ----------- ----- ------- --- [no hits above thresholds] Parsed for domains: Model Domain seq-f seq-t hmm-f hmm-t score E-value -------- ------- ----- ----- ----- ----- ----- ------- [no hits above thresholds] Alignments of top-scoring domains: [no hits above thresholds] // Query: Rabbit4Lib.45.C7 510 1 497 nseq=3; minus strand; translated Scores for sequence family classification (score includes all domains): Model Description Score E-value N -------- ----------- ----- ------- --- Ribosomal_S24e Ribosomal protein S24e 194.0 2.4e-54 1 Parsed for domains: Model Domain seq-f seq-t hmm-f hmm-t score E-value -------- ------- ----- ----- ----- ----- ----- ------- Ribosomal_S24e 1/1 30 112 .. 1 84 [] 194.0 2.4e-54 Alignments of top-scoring domains: Ribosomal_S24e: domain 1 of 1, from 30 to 112: score 194.0, E = 2.4e-54 *->mVvdViHPGrATvsKdevReKLAamYnankDvvsVfgfrtqfGggkt mV+dV+HPG+ATv+K+e+ReKLA+mY++++Dv++Vfgfrt+fGggkt Rabbit4Lib 30 MVIDVLHPGKATVPKTEIREKLAKMYKTTPDVIFVFGFRTHFGGGKT 76 tGfakvYDnveyakkvEpkHrLeRnkLaeetkkesrk<-* tGf+++YD+++yakk+EpkHrL+R++L+e+ kk+srk Rabbit4Lib 77 TGFGMIYDSLDYAKKNEPKHRLARHGLYEK-KKTSRK 112 // Query: Rabbit4Lib.47.C1 284 1 282 nseq=3; minus strand; translated Scores for sequence family classification (score includes all domains): Model Description Score E-value N -------- ----------- ----- ------- --- UBA UBA/TS-N domain 14.4 1.3 1 Parsed for domains: Model Domain seq-f seq-t hmm-f hmm-t score E-value -------- ------- ----- ----- ----- ----- ----- ------- UBA 1/1 54 93 .] 1 45 [] 14.4 1.3 Alignments of top-scoring domains: UBA: domain 1 of 1, from 54 to 93: score 14.4, E = 1.3 *->ideelvkqLreMGGGvfsreeakkALratnnnsDverAvewLleh<- ++ ++++ ++++ + +sr++a++AL+++ n D+ A++ L Rabbit4Lib 54 VEVKDIELVMSQAN--VSRAKAVRALKNNSN--DIVNAIMELTM- 93 * Rabbit4Lib - - // Query: Rabbit4Lib.47.C2 787 43 690 nseq=11; minus strand; translated Scores for sequence family classification (score includes all domains): Model Description Score E-value N -------- ----------- ----- ------- --- NAC NAC domain 98.0 1.9e-25 1 UBA UBA/TS-N domain 14.4 1.3 1 Parsed for domains: Model Domain seq-f seq-t hmm-f hmm-t score E-value -------- ------- ----- ----- ----- ----- ----- ------- NAC 1/1 72 130 .. 1 60 [] 98.0 1.9e-25 UBA 1/1 176 215 .] 1 45 [] 14.4 1.3 Alignments of top-scoring domains: NAC: domain 1 of 1, from 72 to 130: score 98.0, E = 1.9e-25 *->ddkKlqmklkKLgmkqieGveEVnifkedgEivihfnkpeVqkslga +kK+++++ KLg++q+ Gv++V+i+k+++ i++++ kp+V+ks+++ Rabbit4Lib 72 SEKKARKAMSKLGLRQVTGVTRVTIRKSKN-ILFVITKPDVYKSPAS 117 nTyvvtGkakekd<-* +Ty+v+G+ak++d Rabbit4Lib 118 DTYIVFGEAKIED 130 UBA: domain 1 of 1, from 176 to 215: score 14.4, E = 1.3 *->ideelvkqLreMGGGvfsreeakkALratnnnsDverAvewLleh<- ++ ++++ ++++ + +sr++a++AL+++ n D+ A++ L Rabbit4Lib 176 VEVKDIELVMSQAN--VSRAKAVRALKNNSN--DIVNAIMELTM- 215 * Rabbit4Lib - - // Query: Rabbit4Lib.47.C3 787 29 676 nseq=2; minus strand; translated Scores for sequence family classification (score includes all domains): Model Description Score E-value N -------- ----------- ----- ------- --- NAC NAC domain 98.0 1.9e-25 1 UBA UBA/TS-N domain 14.4 1.3 1 Parsed for domains: Model Domain seq-f seq-t hmm-f hmm-t score E-value -------- ------- ----- ----- ----- ----- ----- ------- NAC 1/1 72 130 .. 1 60 [] 98.0 1.9e-25 UBA 1/1 176 215 .] 1 45 [] 14.4 1.3 Alignments of top-scoring domains: NAC: domain 1 of 1, from 72 to 130: score 98.0, E = 1.9e-25 *->ddkKlqmklkKLgmkqieGveEVnifkedgEivihfnkpeVqkslga +kK+++++ KLg++q+ Gv++V+i+k+++ i++++ kp+V+ks+++ Rabbit4Lib 72 SEKKARKAMSKLGLRQVTGVTRVTIRKSKN-ILFVITKPDVYKSPAS 117 nTyvvtGkakekd<-* +Ty+v+G+ak++d Rabbit4Lib 118 DTYIVFGEAKIED 130 UBA: domain 1 of 1, from 176 to 215: score 14.4, E = 1.3 *->ideelvkqLreMGGGvfsreeakkALratnnnsDverAvewLleh<- ++ ++++ ++++ + +sr++a++AL+++ n D+ A++ L Rabbit4Lib 176 VEVKDIELVMSQAN--VSRAKAVRALKNNSN--DIVNAIMELTM- 215 * Rabbit4Lib - - // Query: Rabbit4Lib.47.C4 84 1 156 nseq=2; minus strand; translated Scores for sequence family classification (score includes all domains): Model Description Score E-value N -------- ----------- ----- ------- --- UBA UBA/TS-N domain 14.4 1.3 1 Parsed for domains: Model Domain seq-f seq-t hmm-f hmm-t score E-value -------- ------- ----- ----- ----- ----- ----- ------- UBA 1/1 12 51 .] 1 45 [] 14.4 1.3 Alignments of top-scoring domains: UBA: domain 1 of 1, from 12 to 51: score 14.4, E = 1.3 *->ideelvkqLreMGGGvfsreeakkALratnnnsDverAvewLleh<- ++ ++++ ++++ + +sr++a++AL+++ n D+ A++ L Rabbit4Lib 12 VEVKDIELVMSQAN--VSRAKAVRALKNNSN--DIVNAIMELTM- 51 * Rabbit4Lib - - // Query: Rabbit4Lib.47.C5 380 1 435 nseq=2; minus strand; translated Scores for sequence family classification (score includes all domains): Model Description Score E-value N -------- ----------- ----- ------- --- NAC NAC domain 84.3 2.5e-21 1 UBA UBA/TS-N domain 14.4 1.3 1 Parsed for domains: Model Domain seq-f seq-t hmm-f hmm-t score E-value -------- ------- ----- ----- ----- ----- ----- ------- NAC 1/1 4 59 .. 1 60 [] 84.3 2.5e-21 UBA 1/1 105 144 .] 1 45 [] 14.4 1.3 Alignments of top-scoring domains: NAC: domain 1 of 1, from 4 to 59: score 84.3, E = 2.5e-21 *->ddkKlqmklkKLgmkqieGveEVnifkedgEivihfnkpeVqkslga ++++++ KLg++q+ Gv++V+i+k+++ i++++ kp+V+ks+++ Rabbit4Lib 4 ---RARKAMSKLGLRQVTGVTRVTIRKSKN-ILFVITKPDVYKSPAS 46 nTyvvtGkakekd<-* +Ty+v+G+ak++d Rabbit4Lib 47 DTYIVFGEAKIED 59 UBA: domain 1 of 1, from 105 to 144: score 14.4, E = 1.3 *->ideelvkqLreMGGGvfsreeakkALratnnnsDverAvewLleh<- ++ ++++ ++++ + +sr++a++AL+++ n D+ A++ L Rabbit4Lib 105 VEVKDIELVMSQAN--VSRAKAVRALKNNSN--DIVNAIMELTM- 144 * Rabbit4Lib - - // Query: Rabbit4Lib.49.C1 30 1 63 nseq=2; translated Scores for sequence family classification (score includes all domains): Model Description Score E-value N -------- ----------- ----- ------- --- [no hits above thresholds] Parsed for domains: Model Domain seq-f seq-t hmm-f hmm-t score E-value -------- ------- ----- ----- ----- ----- ----- ------- [no hits above thresholds] Alignments of top-scoring domains: [no hits above thresholds] // Query: Rabbit4Lib.50.C1 121 579 667 nseq=8; translated Scores for sequence family classification (score includes all domains): Model Description Score E-value N -------- ----------- ----- ------- --- [no hits above thresholds] Parsed for domains: Model Domain seq-f seq-t hmm-f hmm-t score E-value -------- ------- ----- ----- ----- ----- ----- ------- [no hits above thresholds] Alignments of top-scoring domains: [no hits above thresholds] // Query: Rabbit4Lib.53.C1 187 1192 1339 nseq=2; translated Scores for sequence family classification (score includes all domains): Model Description Score E-value N -------- ----------- ----- ------- --- [no hits above thresholds] Parsed for domains: Model Domain seq-f seq-t hmm-f hmm-t score E-value -------- ------- ----- ----- ----- ----- ----- ------- [no hits above thresholds] Alignments of top-scoring domains: [no hits above thresholds] // Query: Rabbit4Lib.54.C1 395 167 466 nseq=3; minus strand; translated Scores for sequence family classification (score includes all domains): Model Description Score E-value N -------- ----------- ----- ------- --- KOW KOW motif 36.4 6.5e-07 1 Parsed for domains: Model Domain seq-f seq-t hmm-f hmm-t score E-value -------- ------- ----- ----- ----- ----- ----- ------- KOW 1/1 3 37 .. 1 40 [] 36.4 6.5e-07 Alignments of top-scoring domains: KOW: domain 1 of 1, from 3 to 37: score 36.4, E = 6.5e-07 *->fkkGdvVrVisGpfkG.kkGkVvevdpkkGHGslknrVvve<-* ++k+d+V+V++G++kG+++GkVv+v++kk + +++e Rabbit4Lib 3 IRKDDEVQVVRGHYKGqQIGKVVQVYRKK------YVIYIE 37 // Query: Rabbit4Lib.54.C2 292 1 296 nseq=3; minus strand; translated Scores for sequence family classification (score includes all domains): Model Description Score E-value N -------- ----------- ----- ------- --- KOW KOW motif 30.8 3.1e-05 1 Parsed for domains: Model Domain seq-f seq-t hmm-f hmm-t score E-value -------- ------- ----- ----- ----- ----- ----- ------- KOW 1/1 2 36 .. 1 40 [] 30.8 3.1e-05 Alignments of top-scoring domains: KOW: domain 1 of 1, from 2 to 36: score 30.8, E = 3.1e-05 *->fkkGdvVrVisGpfkG.kkGkVvevdpkkGHGslknrVvve<-* ++ d+V+V++G++kG+++GkVv+v++kk + +++e Rabbit4Lib 2 PRVRDEVQVVRGHYKGqQIGKVVQVYRKK------YVIYIE 36 // Query: Rabbit4Lib.54.C3 395 186 485 nseq=27; minus strand; translated Scores for sequence family classification (score includes all domains): Model Description Score E-value N -------- ----------- ----- ------- --- KOW KOW motif 36.4 6.5e-07 1 Parsed for domains: Model Domain seq-f seq-t hmm-f hmm-t score E-value -------- ------- ----- ----- ----- ----- ----- ------- KOW 1/1 3 37 .. 1 40 [] 36.4 6.5e-07 Alignments of top-scoring domains: KOW: domain 1 of 1, from 3 to 37: score 36.4, E = 6.5e-07 *->fkkGdvVrVisGpfkG.kkGkVvevdpkkGHGslknrVvve<-* ++k+d+V+V++G++kG+++GkVv+v++kk + +++e Rabbit4Lib 3 IRKDDEVQVVRGHYKGqQIGKVVQVYRKK------YVIYIE 37 // Query: Rabbit4Lib.54.C4 312 1 338 nseq=2; minus strand; translated Scores for sequence family classification (score includes all domains): Model Description Score E-value N -------- ----------- ----- ------- --- KOW KOW motif 36.4 6.5e-07 1 Parsed for domains: Model Domain seq-f seq-t hmm-f hmm-t score E-value -------- ------- ----- ----- ----- ----- ----- ------- KOW 1/1 16 50 .. 1 40 [] 36.4 6.5e-07 Alignments of top-scoring domains: KOW: domain 1 of 1, from 16 to 50: score 36.4, E = 6.5e-07 *->fkkGdvVrVisGpfkG.kkGkVvevdpkkGHGslknrVvve<-* ++k+d+V+V++G++kG+++GkVv+v++kk + +++e Rabbit4Lib 16 IRKDDEVQVVRGHYKGqQIGKVVQVYRKK------YVIYIE 50 // Query: Rabbit4Lib.55.C1 72 738 832 nseq=2; translated Scores for sequence family classification (score includes all domains): Model Description Score E-value N -------- ----------- ----- ------- --- [no hits above thresholds] Parsed for domains: Model Domain seq-f seq-t hmm-f hmm-t score E-value -------- ------- ----- ----- ----- ----- ----- ------- [no hits above thresholds] Alignments of top-scoring domains: [no hits above thresholds] // Query: Rabbit4Lib.57.C1 271 596 973 nseq=4; translated Scores for sequence family classification (score includes all domains): Model Description Score E-value N -------- ----------- ----- ------- --- [no hits above thresholds] Parsed for domains: Model Domain seq-f seq-t hmm-f hmm-t score E-value -------- ------- ----- ----- ----- ----- ----- ------- [no hits above thresholds] Alignments of top-scoring domains: [no hits above thresholds] // Query: Rabbit4Lib.57.C2 1567 1 1058 nseq=2; minus strand; translated Scores for sequence family classification (score includes all domains): Model Description Score E-value N -------- ----------- ----- ------- --- DNA_ligase_ZBD NAD-dependent DNA ligase C4 zinc finge 7.7 0.57 1 Vinculin Vinculin family -278.8 0.53 1 Parsed for domains: Model Domain seq-f seq-t hmm-f hmm-t score E-value -------- ------- ----- ----- ----- ----- ----- ------- DNA_ligase_ZBD 1/1 211 241 .. 1 30 [] 7.7 0.57 Vinculin 1/1 1 313 [. 1 1019 [] -278.8 0.53 Alignments of top-scoring domains: DNA_ligase_ZBD: domain 1 of 1, from 211 to 241: score 7.7, E = 0.57 *->thCP..vCgseLvkekeGEvviRCpNpliCPA<-* +hCP+++C+ L + +++++C +iC+ Rabbit4Lib 211 DHCPdsACKQDLLAY-LQRIALYCHQLNICSK 241 Vinculin: domain 1 of 1, from 1 to 313: score -278.8, E = 0.53 *->vfrTktvEkiLEPlaqQVsrLVithekgesekdggavkdLtapVaaV Rabbit4Lib - ----------------------------------------------- - saAvsNlikvGedianesddrILkqdMppAlerVektgqlleeAsrelae Rabbit4Lib - -------------------------------------------------- - DPySsvaRkklirgaRglLsavsrLLllfDeaeVrkIirvckkVldyLav Rabbit4Lib - -------------------------------------------------- - aevaetmedLvqfvKdlgpeltklnkmvdrRqqELthqvhRdiLvaardt Rabbit4Lib - -------------------------------------------------- - lKklaPiLitAmKifvrhkeepqqgveeAreNRdytakrmsdelneIirV Rabbit4Lib 1 ---------------------X---------------------------- 1 lQltsyDEDewdsdnvtvmkkalsaigseLaaAldwLddpnArpGavGEk Rabbit4Lib - -------------------------------------------------- - iiRqIiDpatyieercrPsleeriesiisgaasMADslCtlrnrgqpgas Rabbit4Lib - -------------------------------------------------- - plaivkarrlaEcnGskEisglvaeALqnlqRaGvantAhtleGrlEQAl Rabbit4Lib - -------------------------------------------------- - RWldnPgvDDgGlgrqAlqdLlsEyrklagrkdhgqyrqdldaLcdaIDr Rabbit4Lib - -------------------------------------------------- - laaQLADLemrkkgksPaAraianQLqdkLkDLrrqlrkAvvDhVSDsFl Rabbit4Lib - -------------------------------------------------- - DttTPLklLieAAkappdtPGrEenfeekaknFqeHAnrlvevArLaasv a Rabbit4Lib 2 --------------A----------------------------------- 2 gpcnNketVeairaaAaqvesLtPQVInAAriLlhnPgSkaAqEhmetlK + Rabbit4Lib 3 S------------------------------------------------- 3 nqWedqVrrLTeaVDditdtdDFLavSEehIleDvnkCvvAiqanastPd a Rabbit4Lib 4 -------------------------------------------A------ 4 enaadpqtLvatAgsIarranRVllVvkaEmdNsEdpvfterVkeAakiL EmdN+E++v+te+V+eA+k+L Rabbit4Lib 5 -----------------------------EMDNYEPGVYTEKVLEATKLL 25 sntippmvadakevAvnaldpgGltWaaksweenneefldAvrlVyDAvr snt+ + +++e+Av+al+++ +a++++en ef+dA+rlVyD++r Rabbit4Lib 26 SNTVXATLYQQVEAAVEALSSD----PAQPMDEN--EFIDASRLVYDGIR 69 GvpqsrdirkavLmnrlpeelptdseledklviqEdepadprppspvete dirkavLm+r+peel +ds++e +Ed +d+ + +te Rabbit4Lib 70 ------DIRKAVLMIRTPEEL-DDSDFE-----TED--FDVXKQDKLQTE 105 pqpprpppppetdreemrrlfeEeKakiaaqvqpflaaarkLhqEvaKWd + +++++++++r++m++l++E+Kakia+qv+ f+++++kL++Ev+KWd Rabbit4Lib 106 D---DQLIAGQSARAIMAQLPQEQKAKIAEQVASFQEEKSKLDAEVSKWD 152 skGNDIIalAKrMailMaeMsdlvRGkGpLktkrDlInaAKkIAeaseev ++GNDII+lAK+M+ +l kG +D+I+aAKkIAea++++ Rabbit4Lib 153 DSGNDIIVLAKQMCXDYDGDDRLHPRKGAAQKHSDVISAAKKIAEAGSRM 202 trLAreiArqCtDsrirtdLLavleRIplictQLkIlSkVKAtvlgignv ++L+r+iA++C+Ds++++dLLa+l+RI+l+c+QL+I+SkVKA+v+++g+ Rabbit4Lib 203 DKLGRTIADHCPDSACKQDLLAYLQRIALYCHQLNICSKVKAEVQNLGG- 251 iGPYGqPvElsvedleqaaesLvqnAqNLMqSVkeTVraAevASiKiRtd El+v++ + +a+sL+q+A+NLM++V++TV+a++vAS+K++ + Rabbit4Lib 252 --------ELVVSGVD-SAMSLIQAAKNLMNAVVQTVKASYVASTKYQ-K 291 qqgagtvssprlrWkrKaPwkq<-* +qg+++++ p+++Wk+KaP+k+ Rabbit4Lib 292 SQGMASLNLPAVSWKMKAPEKK 313 // Query: Rabbit4Lib.58.C1 1030 41 427 nseq=6; minus strand; translated Scores for sequence family classification (score includes all domains): Model Description Score E-value N -------- ----------- ----- ------- --- ubiquitin Ubiquitin family 154.3 2.1e-42 1 Ribosomal_L40e Ribosomal L40e family 113.5 3.9e-30 1 Parsed for domains: Model Domain seq-f seq-t hmm-f hmm-t score E-value -------- ------- ----- ----- ----- ----- ----- ------- ubiquitin 1/1 1 74 [. 1 83 [] 154.3 2.1e-42 Ribosomal_L40e 1/1 77 128 .] 1 52 [] 113.5 3.9e-30 Alignments of top-scoring domains: ubiquitin: domain 1 of 1, from 1 to 74: score 154.3, E = 2.1e-42 *->mkifVKtldgkgkvtdgstitlevdpsdTVlelKekIedkegippeq m+ifVKtl+gk titlev+psdT++++K+kI+dkegipp+q Rabbit4Lib 1 MQIFVKTLTGK-------TITLEVEPSDTIENVKAKIQDKEGIPPDQ 40 QrLiyaGkvLreDdktLaeYniqdgsftlhlvlrlr<-* QrLi+aGk+L eD++tL++Yniq++s tlhlvlrlr Rabbit4Lib 41 QRLIFAGKQL-EDGRTLSDYNIQKES-TLHLVLRLR 74 Ribosomal_L40e: domain 1 of 1, from 77 to 128: score 113.5, E = 3.9e-30 *->viEPslkaLAkKYnceKkvCRkCYARLpprAtnCRKkkCGHsnslRl +iEPsl+ LA+KYnc+K +CRkCYARL+prA+nCRKkkCGH+n+lR+ Rabbit4Lib 77 IIEPSLRQLAQKYNCDKMICRKCYARLHPRAVNCRKKKCGHTNNLRP 123 KKKlk<-* KKK+k Rabbit4Lib 124 KKKVK 128 // Query: Rabbit4Lib.58.C2 1526 112 902 nseq=27; minus strand; translated Scores for sequence family classification (score includes all domains): Model Description Score E-value N -------- ----------- ----- ------- --- ubiquitin Ubiquitin family 446.9 1.7e-130 3 Parsed for domains: Model Domain seq-f seq-t hmm-f hmm-t score E-value -------- ------- ----- ----- ----- ----- ----- ------- ubiquitin 1/3 1 74 [. 1 83 [] 154.3 2.1e-42 ubiquitin 2/3 77 150 .. 1 83 [] 154.3 2.1e-42 ubiquitin 3/3 153 226 .. 1 83 [] 151.7 1.3e-41 Alignments of top-scoring domains: ubiquitin: domain 1 of 3, from 1 to 74: score 154.3, E = 2.1e-42 *->mkifVKtldgkgkvtdgstitlevdpsdTVlelKekIedkegippeq m+ifVKtl+gk titlev+psdT++++K+kI+dkegipp+q Rabbit4Lib 1 MQIFVKTLTGK-------TITLEVEPSDTIENVKAKIQDKEGIPPDQ 40 QrLiyaGkvLreDdktLaeYniqdgsftlhlvlrlr<-* QrLi+aGk+L eD++tL++Yniq++s tlhlvlrlr Rabbit4Lib 41 QRLIFAGKQL-EDGRTLSDYNIQKES-TLHLVLRLR 74 ubiquitin: domain 2 of 3, from 77 to 150: score 154.3, E = 2.1e-42 *->mkifVKtldgkgkvtdgstitlevdpsdTVlelKekIedkegippeq m+ifVKtl+gk titlev+psdT++++K+kI+dkegipp+q Rabbit4Lib 77 MQIFVKTLTGK-------TITLEVEPSDTIENVKAKIQDKEGIPPDQ 116 QrLiyaGkvLreDdktLaeYniqdgsftlhlvlrlr<-* QrLi+aGk+L eD++tL++Yniq++s tlhlvlrlr Rabbit4Lib 117 QRLIFAGKQL-EDGRTLSDYNIQKES-TLHLVLRLR 150 ubiquitin: domain 3 of 3, from 153 to 226: score 151.7, E = 1.3e-41 *->mkifVKtldgkgkvtdgstitlevdpsdTVlelKekIedkegippeq m+ifVKtl+gk titlev+psdT++++K+kI+dkegipp+q Rabbit4Lib 153 MQIFVKTLTGK-------TITLEVEPSDTIENVKAKIQDKEGIPPDQ 192 QrLiyaGkvLreDdktLaeYniqdgsftlhlvlrlr<-* QrLi+aGk+L eD++tL++Yniq++s tlhlvlrl Rabbit4Lib 193 QRLIFAGKQL-EDGRTLSDYNIQKES-TLHLVLRLG 226 // Query: Rabbit4Lib.58.C3 1852 1 823 nseq=2; translated Scores for sequence family classification (score includes all domains): Model Description Score E-value N -------- ----------- ----- ------- --- ubiquitin Ubiquitin family 443.1 2.3e-129 3 Parsed for domains: Model Domain seq-f seq-t hmm-f hmm-t score E-value -------- ------- ----- ----- ----- ----- ----- ------- ubiquitin 1/3 33 106 .. 1 83 [] 148.2 1.5e-40 ubiquitin 2/3 109 182 .. 1 83 [] 154.3 2.1e-42 ubiquitin 3/3 185 258 .. 1 83 [] 154.3 2.1e-42 Alignments of top-scoring domains: ubiquitin: domain 1 of 3, from 33 to 106: score 148.2, E = 1.5e-40 *->mkifVKtldgkgkvtdgstitlevdpsdTVlelKekIedkegippeq +ifVKtl+gk titlev+psdT++++K+kI+dkegipp+q Rabbit4Lib 33 KQIFVKTLTGK-------TITLEVEPSDTIENVKAKIQDKEGIPPDQ 72 QrLiyaGkvLreDdktLaeYniqdgsftlhlvlrlr<-* QrLi+aGk+L eD++tL++Yniq++s tlhlvlrlr Rabbit4Lib 73 QRLIFAGKQL-EDGRTLSDYNIQKES-TLHLVLRLR 106 ubiquitin: domain 2 of 3, from 109 to 182: score 154.3, E = 2.1e-42 *->mkifVKtldgkgkvtdgstitlevdpsdTVlelKekIedkegippeq m+ifVKtl+gk titlev+psdT++++K+kI+dkegipp+q Rabbit4Lib 109 MQIFVKTLTGK-------TITLEVEPSDTIENVKAKIQDKEGIPPDQ 148 QrLiyaGkvLreDdktLaeYniqdgsftlhlvlrlr<-* QrLi+aGk+L eD++tL++Yniq++s tlhlvlrlr Rabbit4Lib 149 QRLIFAGKQL-EDGRTLSDYNIQKES-TLHLVLRLR 182 ubiquitin: domain 3 of 3, from 185 to 258: score 154.3, E = 2.1e-42 *->mkifVKtldgkgkvtdgstitlevdpsdTVlelKekIedkegippeq m+ifVKtl+gk titlev+psdT++++K+kI+dkegipp+q Rabbit4Lib 185 MQIFVKTLTGK-------TITLEVEPSDTIENVKAKIQDKEGIPPDQ 224 QrLiyaGkvLreDdktLaeYniqdgsftlhlvlrlr<-* QrLi+aGk+L eD++tL++Yniq++s tlhlvlrlr Rabbit4Lib 225 QRLIFAGKQL-EDGRTLSDYNIQKES-TLHLVLRLR 258 // Query: Rabbit4Lib.58.C4 1492 102 773 nseq=21; translated Scores for sequence family classification (score includes all domains): Model Description Score E-value N -------- ----------- ----- ------- --- ubiquitin Ubiquitin family 419.1 3.9e-122 3 Parsed for domains: Model Domain seq-f seq-t hmm-f hmm-t score E-value -------- ------- ----- ----- ----- ----- ----- ------- ubiquitin 1/3 1 68 [. 1 83 [] 123.2 4.9e-33 ubiquitin 2/3 71 144 .. 1 83 [] 154.3 2.1e-42 ubiquitin 3/3 147 220 .. 1 83 [] 154.3 2.1e-42 Alignments of top-scoring domains: ubiquitin: domain 1 of 3, from 1 to 68: score 123.2, E = 4.9e-33 *->mkifVKtldgkgkvtdgstitlevdpsdTVlelKekIedkegippeq tl+gk titlev+psdT++++K+kI+dkegipp+q Rabbit4Lib 1 ------TLTGK-------TITLEVEPSDTIENVKAKIQDKEGIPPDQ 34 QrLiyaGkvLreDdktLaeYniqdgsftlhlvlrlr<-* QrLi+aGk+L eD++tL++Yniq++s tlhlvlrlr Rabbit4Lib 35 QRLIFAGKQL-EDGRTLSDYNIQKES-TLHLVLRLR 68 ubiquitin: domain 2 of 3, from 71 to 144: score 154.3, E = 2.1e-42 *->mkifVKtldgkgkvtdgstitlevdpsdTVlelKekIedkegippeq m+ifVKtl+gk titlev+psdT++++K+kI+dkegipp+q Rabbit4Lib 71 MQIFVKTLTGK-------TITLEVEPSDTIENVKAKIQDKEGIPPDQ 110 QrLiyaGkvLreDdktLaeYniqdgsftlhlvlrlr<-* QrLi+aGk+L eD++tL++Yniq++s tlhlvlrlr Rabbit4Lib 111 QRLIFAGKQL-EDGRTLSDYNIQKES-TLHLVLRLR 144 ubiquitin: domain 3 of 3, from 147 to 220: score 154.3, E = 2.1e-42 *->mkifVKtldgkgkvtdgstitlevdpsdTVlelKekIedkegippeq m+ifVKtl+gk titlev+psdT++++K+kI+dkegipp+q Rabbit4Lib 147 MQIFVKTLTGK-------TITLEVEPSDTIENVKAKIQDKEGIPPDQ 186 QrLiyaGkvLreDdktLaeYniqdgsftlhlvlrlr<-* QrLi+aGk+L eD++tL++Yniq++s tlhlvlrlr Rabbit4Lib 187 QRLIFAGKQL-EDGRTLSDYNIQKES-TLHLVLRLR 220 // Query: Rabbit4Lib.58.C5 1503 1 787 nseq=2; minus strand; translated Scores for sequence family classification (score includes all domains): Model Description Score E-value N -------- ----------- ----- ------- --- ubiquitin Ubiquitin family 431.0 1e-125 4 Parsed for domains: Model Domain seq-f seq-t hmm-f hmm-t score E-value -------- ------- ----- ----- ----- ----- ----- ------- ubiquitin 1/4 1 51 [. 1 83 [] 56.1 7.8e-13 ubiquitin 2/4 54 127 .. 1 83 [] 152.8 6e-42 ubiquitin 3/4 130 203 .. 1 83 [] 152.8 6e-42 ubiquitin 4/4 206 263 .] 1 83 [] 87.1 3.7e-22 Alignments of top-scoring domains: ubiquitin: domain 1 of 4, from 1 to 51: score 56.1, E = 7.8e-13 *->mkifVKtldgkgkvtdgstitlevdpsdTVlelKekIedkegippeq +l +kI+dkegipp+q Rabbit4Lib 1 ------------------------------XTLRAKIQDKEGIPPDQ 17 QrLiyaGkvLreDdktLaeYniqdgsftlhlvlrlr<-* QrLi+aGk+L eD++tL++Yniq++s tlhlvlrl+ Rabbit4Lib 18 QRLIFAGKQL-EDGRTLSDYNIQKES-TLHLVLRLK 51 ubiquitin: domain 2 of 4, from 54 to 127: score 152.8, E = 6e-42 *->mkifVKtldgkgkvtdgstitlevdpsdTVlelKekIedkegippeq m+ifVKtl+gk titlev+psdT++++K+kI+dkegipp+q Rabbit4Lib 54 MQIFVKTLTGK-------TITLEVEPSDTIENVKAKIQDKEGIPPDQ 93 QrLiyaGkvLreDdktLaeYniqdgsftlhlvlrlr<-* QrLi+aGk+L eD++tL++Yniq++s tlhlvlrl+ Rabbit4Lib 94 QRLIFAGKQL-EDGRTLSDYNIQKES-TLHLVLRLK 127 ubiquitin: domain 3 of 4, from 130 to 203: score 152.8, E = 6e-42 *->mkifVKtldgkgkvtdgstitlevdpsdTVlelKekIedkegippeq m+ifVKtl+gk titlev+psdT++++K+kI+dkegipp+q Rabbit4Lib 130 MQIFVKTLTGK-------TITLEVEPSDTIENVKAKIQDKEGIPPDQ 169 QrLiyaGkvLreDdktLaeYniqdgsftlhlvlrlr<-* QrLi+aGk+L eD++tL++Yniq++s tlhlvlrl+ Rabbit4Lib 170 QRLIFAGKQL-EDGRTLSDYNIQKES-TLHLVLRLK 203 ubiquitin: domain 4 of 4, from 206 to 263: score 87.1, E = 3.7e-22 *->mkifVKtldgkgkvtdgstitlevdpsdTVlelKekIedkegippeq m+ifVKtl+gk titlev+psdT++++K+kI+dkegipp+q Rabbit4Lib 206 MQIFVKTLTGK-------TITLEVEPSDTIENVKAKIQDKEGIPPDQ 245 QrLiyaGkvLreDdktLaeYniqdgsftlhlvlrlr<-* QrLi+aGk+L eD++tL s Rabbit4Lib 246 QRLIFAGKQL-EDGRTL--------S---------X 263 // Query: Rabbit4Lib.60.C1 255 71 208 nseq=5; minus strand; translated Scores for sequence family classification (score includes all domains): Model Description Score E-value N -------- ----------- ----- ------- --- Thymosin Thymosin beta-4 family 75.1 1.4e-18 1 Parsed for domains: Model Domain seq-f seq-t hmm-f hmm-t score E-value -------- ------- ----- ----- ----- ----- ----- ------- Thymosin 1/1 2 42 .. 1 41 [] 75.1 1.4e-18 Alignments of top-scoring domains: Thymosin: domain 1 of 1, from 2 to 42: score 75.1, E = 1.4e-18 *->sDKPdleEiasFDKaKLKKtEtqEKnpLPtKEtiEqEKqae<-* sDKPdl E+++FDK+KLKKt t EKn+LP+KEti qEK + Rabbit4Lib 2 SDKPDLSEVEKFDKSKLKKTNTEEKNTLPSKETIQQEKESV 42 // Query: Rabbit4Lib.60.C2 255 77 214 nseq=9; minus strand; translated Scores for sequence family classification (score includes all domains): Model Description Score E-value N -------- ----------- ----- ------- --- Thymosin Thymosin beta-4 family 75.1 1.4e-18 1 Parsed for domains: Model Domain seq-f seq-t hmm-f hmm-t score E-value -------- ------- ----- ----- ----- ----- ----- ------- Thymosin 1/1 2 42 .. 1 41 [] 75.1 1.4e-18 Alignments of top-scoring domains: Thymosin: domain 1 of 1, from 2 to 42: score 75.1, E = 1.4e-18 *->sDKPdleEiasFDKaKLKKtEtqEKnpLPtKEtiEqEKqae<-* sDKPdl E+++FDK+KLKKt t EKn+LP+KEti qEK + Rabbit4Lib 2 SDKPDLSEVEKFDKSKLKKTNTEEKNTLPSKETIQQEKESV 42 // Query: Rabbit4Lib.60.C3 217 77 219 nseq=5; minus strand; translated Scores for sequence family classification (score includes all domains): Model Description Score E-value N -------- ----------- ----- ------- --- Thymosin Thymosin beta-4 family 33.8 4.1e-06 1 Parsed for domains: Model Domain seq-f seq-t hmm-f hmm-t score E-value -------- ------- ----- ----- ----- ----- ----- ------- Thymosin 1/1 2 42 .. 1 41 [] 33.8 4.1e-06 Alignments of top-scoring domains: Thymosin: domain 1 of 1, from 2 to 42: score 33.8, E = 4.1e-06 *->sDKPdleEiasFDKaKLKKtEtqEKnpLPtKEtiEqEKqae<-* sDKPdl E+++FDK+KLKKt + K P E+ + Rabbit4Lib 2 SDKPDLSEVEKFDKSKLKKTILKKKILFPEGNYPTGERVCS 42 // Query: Rabbit4Lib.61.C1 1251 1 1207 nseq=4; minus strand; translated Scores for sequence family classification (score includes all domains): Model Description Score E-value N -------- ----------- ----- ------- --- DUF904 Protein of unknown function (DUF904) -16.6 5.7 1 KE2 KE2 family protein -17.8 9.4 1 Phage_GP20 Phage minor structural protein GP20 -69.2 9.6 1 TPR_MLP1_2 TPR/MLP1/MLP2-like protein -90.5 3.4 1 Parsed for domains: Model Domain seq-f seq-t hmm-f hmm-t score E-value -------- ------- ----- ----- ----- ----- ----- ------- DUF904 1/1 114 192 .. 1 88 [] -16.6 5.7 Phage_GP20 1/1 98 220 .. 1 162 [] -69.2 9.6 TPR_MLP1_2 1/1 86 312 .. 1 271 [] -90.5 3.4 KE2 1/1 313 403 .] 1 106 [] -17.8 9.4 Alignments of top-scoring domains: DUF904: domain 1 of 1, from 114 to 192: score -16.6, E = 5.7 *->MslEvlskLEeKiqqAiDTItLLQmEieELKekNeelkkennellse + E ls+ EeK+++A+ + L +E L + ++lk ++e ++ Rabbit4Lib 114 ELKESLSEVEEKYKKAMVSNAQLDNEKNNLIYQVDTLKDVIEEQEEQ 160 rekLeeeNnqLkqeheiAlnIeNrEkWqerLrgLLgKlnev<-* + +eN+ +e+e ++ + L K++e Rabbit4Lib 161 MAEFYRENEEKSKELER---------QKHMCSILQHKMDEL 192 Phage_GP20: domain 1 of 1, from 98 to 220: score -69.2, E = 9.6 *->deqinsVmalygkdveeAdKqqledvkaErDsLKsql...skrde.. +qi V y ++ e K l++v+ + K+ +++++d ++ Rabbit4Lib 98 KDQIQDVEGRYMQGLKE-LKESLSEVE---EKYKKAMvsnAQLDNek 140 .....qIedLkensgnseELkKqIeeLqeenkeleseaaAeLaetKkdsA ++ q++ Lk+ eE+ q +e en+e+ + eL +K Rabbit4Lib 141 nnliyQVDTLKDVI---EEQEEQMAEFYRENEEKSK----ELERQKHMCS 183 VklAlkdakArnAkaikafidkDeieLdDdGkLkGLdEqikkLkESdpYL + l +De++ +G L + dE i Rabbit4Lib 184 I---LQH-------------KMDELK---EG-LRQRDELI---------- 203 FakeepvGkkkspkilpgGNPkagg<-* e+ + + i p G P + + Rabbit4Lib 204 ---EK---HGLV--IIPDGTPNGDV 220 TPR_MLP1_2: domain 1 of 1, from 86 to 312: score -90.5, E = 3.4 *->afvekssaLrsekkeieslrekNLVKKSQieamitqlqtlrnDlekq + L k+ i++++ + + + +++l++ Rabbit4Lib 86 LIKXNYXDLYDLKDQIQDVEGR-------YMQGLKELKE-------- 117 aesakeaqsnYerelikhaetseeLtkLreelaklqaelakLkssaesaq s+ e +++Y +++++a +L e + l ++++Lk e+++ Rabbit4Lib 118 --SLSEVEEKYKKAMVSNA-------QLDNEKNNLIYQVDTLKDVIEEQE 158 saLsenErsWseqkamLeqEl...slaeeriedLes...QNkLLHdQies ++ e r ++e + Le++++ s + + ++L ++ +Q L+++ + Rabbit4Lib 159 EQMAEFYRENEEKSKELERQKhmcSILQHKMDELKEglrQRDELIEKHGL 208 LSskisvlqqessqedstaldkslnnedslilsrlladEEaknneqlrel + +d n++ + + + Rabbit4Lib 209 V----------------IIPDGTPNGD-------------VNHEPVVGAI 229 isyLRrEkdiletK....ldvakrEnarLrQqvellqkeldeLrgsLtae + + le+ ++++ldv r +a+ + + l +++ L ++L +e Rabbit4Lib 230 TVVSQEAAQVLESAgegpLDVRLRKLAGEKEE---LLSQVRKLKLQLEEE 276 RaevqasavtiqehkeimkklnqlNlL...rESNmiL<-* R + + s ++ e ++ +++ l+l++ +r+ N++ Rabbit4Lib 277 RQKCSRSDGSAGELAGLQNGSD-LQLIemqRDANRQI 312 KE2: domain 1 of 1, from 313 to 403: score -17.8, E = 9.4 *->QelinkfqqLqqqleklaeqikqletqlkEielvleELelldedtkv +e k+++ +q++ l++ le q + + e e+++++ Rabbit4Lib 313 SEYKFKLSKAEQDITTLEQSVSRLEGQVLRYKAAAENAEKVEDE--- 356 YklvGgvLVkqdkeevkeeLeerketlekeiktLekqleklekeleelke ++ k L++++ t +i+++e ++l k+le++k+ Rabbit4Lib 357 ------------LKAEKRKLQRELRTALDKIEEMEMTNSHLAKRLEKMKA 394 elqkllgsa<-* + +ll+++ Rabbit4Lib 395 NRTALLAQQ 403 // Query: Rabbit4Lib.64.C2 566 1 456 nseq=3; minus strand; translated Scores for sequence family classification (score includes all domains): Model Description Score E-value N -------- ----------- ----- ------- --- [no hits above thresholds] Parsed for domains: Model Domain seq-f seq-t hmm-f hmm-t score E-value -------- ------- ----- ----- ----- ----- ----- ------- [no hits above thresholds] Alignments of top-scoring domains: [no hits above thresholds] // Query: Rabbit4Lib.65.C1 556 36 413 nseq=2; minus strand; translated Scores for sequence family classification (score includes all domains): Model Description Score E-value N -------- ----------- ----- ------- --- Ribosomal_S25 S25 ribosomal protein 264.3 1.6e-75 1 Parsed for domains: Model Domain seq-f seq-t hmm-f hmm-t score E-value -------- ------- ----- ----- ----- ----- ----- ------- Ribosomal_S25 1/1 1 113 [. 1 111 [] 264.3 1.6e-75 Alignments of top-scoring domains: Ribosomal_S25: domain 1 of 1, from 1 to 113: score 264.3, E = 1.6e-75 *->MpPKkaqkksksakspkkeak..gssGGkakKKKWSKGkvkdKlNNa MpPK+++kk++++ks+kk++++ ++sGGkakKKKWSKGkv+dKlNN+ Rabbit4Lib 1 MPPKDDKKKKDAGKSAKKDKDpvNKSGGKAKKKKWSKGKVRDKLNNL 47 VLFDkatYDKLlKEvPtyKlITpSVlSdRLKInGSLARkAireLlskGlI VLFDkatYDKL+KEvP+yKlITp+V+S+RLKI+GSLAR+A++eLlskGlI Rabbit4Lib 48 VLFDKATYDKLCKEVPNYKLITPAVVSERLKIRGSLARAALQELLSKGLI 97 kmVskHskQaIYTRAt<-* k+VskH++Q+IYTR+t Rabbit4Lib 98 KLVSKHRAQVIYTRNT 113 // Query: Rabbit4Lib.65.C2 497 37 375 nseq=2; minus strand; translated Scores for sequence family classification (score includes all domains): Model Description Score E-value N -------- ----------- ----- ------- --- Ribosomal_S25 S25 ribosomal protein 226.3 4.3e-64 1 Parsed for domains: Model Domain seq-f seq-t hmm-f hmm-t score E-value -------- ------- ----- ----- ----- ----- ----- ------- Ribosomal_S25 1/1 1 100 [. 1 111 [] 226.3 4.3e-64 Alignments of top-scoring domains: Ribosomal_S25: domain 1 of 1, from 1 to 100: score 226.3, E = 4.3e-64 *->MpPKkaqkksksakspkkeak..gssGGkakKKKWSKGkvkdKlNNa K s+kk++++ ++sGGkakKKKWSKGkv+dKlNN+ Rabbit4Lib 1 ---K----------SAKKDKDpvNKSGGKAKKKKWSKGKVRDKLNNL 34 VLFDkatYDKLlKEvPtyKlITpSVlSdRLKInGSLARkAireLlskGlI VLFDkatYDKL+KEvP+yKlITp+V+S+RLKI+GSLAR+A++eLlskGlI Rabbit4Lib 35 VLFDKATYDKLCKEVPNYKLITPAVVSERLKIRGSLARAALQELLSKGLI 84 kmVskHskQaIYTRAt<-* k+VskH++Q+IYTR+t Rabbit4Lib 85 KLVSKHRAQVIYTRNT 100 // Query: Rabbit4Lib.65.C3 556 68 445 nseq=11; minus strand; translated Scores for sequence family classification (score includes all domains): Model Description Score E-value N -------- ----------- ----- ------- --- Ribosomal_S25 S25 ribosomal protein 264.3 1.6e-75 1 Parsed for domains: Model Domain seq-f seq-t hmm-f hmm-t score E-value -------- ------- ----- ----- ----- ----- ----- ------- Ribosomal_S25 1/1 1 113 [. 1 111 [] 264.3 1.6e-75 Alignments of top-scoring domains: Ribosomal_S25: domain 1 of 1, from 1 to 113: score 264.3, E = 1.6e-75 *->MpPKkaqkksksakspkkeak..gssGGkakKKKWSKGkvkdKlNNa MpPK+++kk++++ks+kk++++ ++sGGkakKKKWSKGkv+dKlNN+ Rabbit4Lib 1 MPPKDDKKKKDAGKSAKKDKDpvNKSGGKAKKKKWSKGKVRDKLNNL 47 VLFDkatYDKLlKEvPtyKlITpSVlSdRLKInGSLARkAireLlskGlI VLFDkatYDKL+KEvP+yKlITp+V+S+RLKI+GSLAR+A++eLlskGlI Rabbit4Lib 48 VLFDKATYDKLCKEVPNYKLITPAVVSERLKIRGSLARAALQELLSKGLI 97 kmVskHskQaIYTRAt<-* k+VskH++Q+IYTR+t Rabbit4Lib 98 KLVSKHRAQVIYTRNT 113 // Query: Rabbit4Lib.65.C4 556 84 461 nseq=2; minus strand; translated Scores for sequence family classification (score includes all domains): Model Description Score E-value N -------- ----------- ----- ------- --- Ribosomal_S25 S25 ribosomal protein 264.3 1.6e-75 1 Parsed for domains: Model Domain seq-f seq-t hmm-f hmm-t score E-value -------- ------- ----- ----- ----- ----- ----- ------- Ribosomal_S25 1/1 1 113 [. 1 111 [] 264.3 1.6e-75 Alignments of top-scoring domains: Ribosomal_S25: domain 1 of 1, from 1 to 113: score 264.3, E = 1.6e-75 *->MpPKkaqkksksakspkkeak..gssGGkakKKKWSKGkvkdKlNNa MpPK+++kk++++ks+kk++++ ++sGGkakKKKWSKGkv+dKlNN+ Rabbit4Lib 1 MPPKDDKKKKDAGKSAKKDKDpvNKSGGKAKKKKWSKGKVRDKLNNL 47 VLFDkatYDKLlKEvPtyKlITpSVlSdRLKInGSLARkAireLlskGlI VLFDkatYDKL+KEvP+yKlITp+V+S+RLKI+GSLAR+A++eLlskGlI Rabbit4Lib 48 VLFDKATYDKLCKEVPNYKLITPAVVSERLKIRGSLARAALQELLSKGLI 97 kmVskHskQaIYTRAt<-* k+VskH++Q+IYTR+t Rabbit4Lib 98 KLVSKHRAQVIYTRNT 113 // Query: Rabbit4Lib.66.C1 1581 1 1350 nseq=2; minus strand; translated Scores for sequence family classification (score includes all domains): Model Description Score E-value N -------- ----------- ----- ------- --- zf-C2H2 Zinc finger, C2H2 type 11.0 8.5 1 zf-U1 U1 zinc finger 3.6 0.35 1 U79_P34 HSV U79 / HCMV P34 -95.4 0.15 1 Parsed for domains: Model Domain seq-f seq-t hmm-f hmm-t score E-value -------- ------- ----- ----- ----- ----- ----- ------- U79_P34 1/1 150 379 .. 1 285 [] -95.4 0.15 zf-C2H2 1/1 399 423 .. 1 24 [] 11.0 8.5 zf-U1 1/1 394 431 .. 1 38 [] 3.6 0.35 Alignments of top-scoring domains: U79_P34: domain 1 of 1, from 150 to 379: score -95.4, E = 0.15 *->RkYgTFdnvsrayhQiVtqtldLRrfeFetgclieflagsGkcEtls + T d ++ + +++ d+ +F t ++ +++G s Rabbit4Lib 150 -RLVTVDEIGEVEELPLNESADI---TFAT---LNTKGDEGNNVRES 189 kGWlsAmImwtsetdssakaaqGsltlDItsDdGkcktynmfaRGsIlCs G +s ++ +e s t+D Dd ++ Rabbit4Lib 190 MGFIS---SQMPEDPS------ALVTVDEIQDDSSDLHL----------- 219 KsitSisqntGsDegrerlLTvvheNgkLQ..vTyVthlkvaheeeirnl + +e +++l ++ ++L +++ +Vt+ v+ ee+ + Rabbit4Lib 220 -----VTLDEVTEEDEDSL----ADFNNLKeeLNFVTVDEVGEEEDGD-- 258 GEdvklaekfekecralsrkksssvddehrkrsgkqkekRRvEDssq... d+k++ +k r ++ k+ rkr + k + E sq+++ Rabbit4Lib 259 -SDLKVELAQSKSDRPTDKKGD-------RKRRAVDTKKTKLEALSQggp 300 ....khkeDrkKkqE..LCnGtLHekrrnd....edkrpgggggsGsGgq +++ eD k E++L t ++ r ++ +++dk+ g + g+G++ Rabbit4Lib 301 vnenIMGEDLKTMIErhLAAKTPTKRTRIGkvppSDKAAGTEAGRGEEAF 350 sslksvnfyfscvkersrlLedeCspreppkeKRQKthHddRPeRrlEpq + ++ + L+d + p+ KR+K E + Rabbit4Lib 351 HIEEVDE---------DPGLKD-----SEPERKRKK----------TEDS 376 see<-* s+ Rabbit4Lib 377 SLG 379 zf-C2H2: domain 1 of 1, from 399 to 423: score 11.0, E = 8.5 *->ykCpfdCgksFsrksnLkrHlrt..H<-* + Cp +C +s + +++H ++++H Rabbit4Lib 399 FFCP-ICSLFYSGEKAMTNHCKStrH 423 zf-U1: domain 1 of 1, from 394 to 431: score 3.6, E = 0.35 *->mPk..YYCdYCdcyLthDspsVRksHngGrkHkenvkdYy<-* Pk +++C C + + ++ H+ +Hk+n+ +++ Rabbit4Lib 394 VPKagFFCPICSLFYSGEKAMT--NHCKSTRHKQNTEKFM 431 // Query: Rabbit4Lib.68.C1 59 183 245 nseq=2; translated Scores for sequence family classification (score includes all domains): Model Description Score E-value N -------- ----------- ----- ------- --- [no hits above thresholds] Parsed for domains: Model Domain seq-f seq-t hmm-f hmm-t score E-value -------- ------- ----- ----- ----- ----- ----- ------- [no hits above thresholds] Alignments of top-scoring domains: [no hits above thresholds] // Query: Rabbit4Lib.68.C3 24 200 263 nseq=3; minus strand; translated Scores for sequence family classification (score includes all domains): Model Description Score E-value N -------- ----------- ----- ------- --- [no hits above thresholds] Parsed for domains: Model Domain seq-f seq-t hmm-f hmm-t score E-value -------- ------- ----- ----- ----- ----- ----- ------- [no hits above thresholds] Alignments of top-scoring domains: [no hits above thresholds] // Query: Rabbit4Lib.68.C5 109 73 167 nseq=3; translated Scores for sequence family classification (score includes all domains): Model Description Score E-value N -------- ----------- ----- ------- --- [no hits above thresholds] Parsed for domains: Model Domain seq-f seq-t hmm-f hmm-t score E-value -------- ------- ----- ----- ----- ----- ----- ------- [no hits above thresholds] Alignments of top-scoring domains: [no hits above thresholds] // Query: Rabbit4Lib.69.C1 380 1 390 nseq=2; minus strand; translated Scores for sequence family classification (score includes all domains): Model Description Score E-value N -------- ----------- ----- ------- --- Ribosomal_L22e Ribosomal L22e protein family 299.2 5e-86 1 Parsed for domains: Model Domain seq-f seq-t hmm-f hmm-t score E-value -------- ------- ----- ----- ----- ----- ----- ------- Ribosomal_L22e 1/1 13 127 .. 1 117 [] 299.2 5e-86 Alignments of top-scoring domains: Ribosomal_L22e: domain 1 of 1, from 13 to 127: score 299.2, E = 5e-86 *->srKkKVslkftvDctnpvEDgIfDvAdfEkYLidrIKVnGKvGNLGn +KkK+ lkft+Dct+pvEDgI+D+A+fE++L +rIKVnGK GNLG+ Rabbit4Lib 13 GKKKKQVLKFTLDCTHPVEDGIMDAANFEQFLQERIKVNGKAGNLGG 59 nvvkversksSKvtVvSevpFSkrYLKYLTKKYLKKNsLRDWLRVVankK + v +ersk SK+tV SevpFSkrYLKYLTKKYLKKN+LRDWLRVVan+K Rabbit4Lib 60 GAVTIERSK-SKITVTSEVPFSKRYLKYLTKKYLKKNNLRDWLRVVANSK 108 nsYELRYfqinsgdADEeeD<-* +sYELRYfqin+++ +EeeD Rabbit4Lib 109 ESYELRYFQINQDE-EEEED 127 // Query: Rabbit4Lib.70.C2 441 74 330 nseq=4; minus strand; translated Scores for sequence family classification (score includes all domains): Model Description Score E-value N -------- ----------- ----- ------- --- COLFI Fibrillar collagen C-terminal domain -44.8 6.2e-07 1 Parsed for domains: Model Domain seq-f seq-t hmm-f hmm-t score E-value -------- ------- ----- ----- ----- ----- ----- ------- COLFI 1/1 2 83 .. 1 226 [] -44.8 6.2e-07 Alignments of top-scoring domains: COLFI: domain 1 of 1, from 2 to 83: score -44.8, E = 6.2e-07 *->lksPeGksrknPARtCkDLfLchpefksGeYWiDPNqGCikDAikVf Rabbit4Lib - ----------------------------------------------- - CnkrfetGvgeTCisptpksvpkRiksWykgkskdkKhvWFgetmegGfk C + + Rabbit4Lib 2 CY--------------------Q-------EX------------------ 6 fsYiddelnpeisnvQlTFLRLLSteAsQNiTYhCKNSvAYmDeatGNlk Y + Rabbit4Lib 7 --Y----------------------------------------------D 8 kAlilmgSnDvElsadgnskFtYtvlGeDGCssrtgewgKTViEyeTkKt kAl+++gSnD+E+s d n+++++++ DGC+sr+g+ gKTViE++T+K+ Rabbit4Lib 9 KALRFLGSNDEEMSHD-NNPYIKALD--DGCASRKGY-GKTVIEINTPKI 54 tRLPIvDiApsDiGgedQeFGveiGPVCF<-* +++PI+D++++D+G+ +Q+FG+e+ VCF Rabbit4Lib 55 DQVPIIDVMINDFGDHNQKFGFEVSAVCF 83 // Query: Rabbit4Lib.71.C1 334 41 514 nseq=33; minus strand; translated Scores for sequence family classification (score includes all domains): Model Description Score E-value N -------- ----------- ----- ------- --- Ribosomal_L24e Ribosomal protein L24e 155.7 8.1e-43 1 Parsed for domains: Model Domain seq-f seq-t hmm-f hmm-t score E-value -------- ------- ----- ----- ----- ----- ----- ------- Ribosomal_L24e 1/1 1 71 [. 1 71 [] 155.7 8.1e-43 Alignments of top-scoring domains: Ribosomal_L24e: domain 1 of 1, from 1 to 71: score 155.7, E = 8.1e-43 *->mkvelCsFsGykIYPGkGimFVRkDskVfrFcsSKCeknFhmkRnPR mkvelCsFsGykI P +G ++R+D+kVf+F+++KCe++F++kRnPR Rabbit4Lib 1 MKVELCSFSGYKIIPDTGGXYARTDGKVFQFLNAKCESAFLSKRNPR 47 klaWTklYRkqHkKgeaeEaakkr<-* +++WT+lYR++HkKg++eE++kkr Rabbit4Lib 48 QINWTVLYRRKHKKGQSEEIQKKR 71 // Query: Rabbit4Lib.71.C2 334 30 503 nseq=8; minus strand; translated Scores for sequence family classification (score includes all domains): Model Description Score E-value N -------- ----------- ----- ------- --- Ribosomal_L24e Ribosomal protein L24e 155.7 8.1e-43 1 Parsed for domains: Model Domain seq-f seq-t hmm-f hmm-t score E-value -------- ------- ----- ----- ----- ----- ----- ------- Ribosomal_L24e 1/1 1 71 [. 1 71 [] 155.7 8.1e-43 Alignments of top-scoring domains: Ribosomal_L24e: domain 1 of 1, from 1 to 71: score 155.7, E = 8.1e-43 *->mkvelCsFsGykIYPGkGimFVRkDskVfrFcsSKCeknFhmkRnPR mkvelCsFsGykI P +G ++R+D+kVf+F+++KCe++F++kRnPR Rabbit4Lib 1 MKVELCSFSGYKIIPDTGGXYARTDGKVFQFLNAKCESAFLSKRNPR 47 klaWTklYRkqHkKgeaeEaakkr<-* +++WT+lYR++HkKg++eE++kkr Rabbit4Lib 48 QINWTVLYRRKHKKGQSEEIQKKR 71 // Query: Rabbit4Lib.71.C3 318 1 297 nseq=2; minus strand; translated Scores for sequence family classification (score includes all domains): Model Description Score E-value N -------- ----------- ----- ------- --- [no hits above thresholds] Parsed for domains: Model Domain seq-f seq-t hmm-f hmm-t score E-value -------- ------- ----- ----- ----- ----- ----- ------- [no hits above thresholds] Alignments of top-scoring domains: [no hits above thresholds] // Query: Rabbit4Lib.72.C1 268 1 387 nseq=4; minus strand; translated Scores for sequence family classification (score includes all domains): Model Description Score E-value N -------- ----------- ----- ------- --- Ribosomal_L35Ae Ribosomal protein L35Ae 262.2 7.1e-75 1 Parsed for domains: Model Domain seq-f seq-t hmm-f hmm-t score E-value -------- ------- ----- ----- ----- ----- ----- ------- Ribosomal_L35Ae 1/1 25 122 .. 1 106 [] 262.2 7.1e-75 Alignments of top-scoring domains: Ribosomal_L35Ae: domain 1 of 1, from 25 to 122: score 262.2, E = 7.1e-75 *->LyvKgiflsYkRskRnQhenvsLiKiEGVnsreeAsFYlGKRvaYlY vK+if++YkR++RnQ+e+++L+KiEGV++r+e++FYlGKR+aY+Y Rabbit4Lib 25 --VKAIFAGYKRGLRNQREHTALLKIEGVYARDETEFYLGKRCAYVY 69 KAknevrksGHTVaPGGkPtktRviWGKitRvHGNsGaVRAkFrkNLPak KAkn+ TV+PGGkP+ktRviWGK+tR+HGNsG+VRAkFr+NLPak Rabbit4Lib 70 KAKNN------TVTPGGKPNKTRVIWGKVTRAHGNSGMVRAKFRSNLPAK 113 AlGdrvRil<-* A+G+r+R++ Rabbit4Lib 114 AIGHRIRVM 122 // Query: Rabbit4Lib.72.C2 302 1 392 nseq=4; translated Scores for sequence family classification (score includes all domains): Model Description Score E-value N -------- ----------- ----- ------- --- Ribosomal_L35Ae Ribosomal protein L35Ae 262.2 7.1e-75 1 Parsed for domains: Model Domain seq-f seq-t hmm-f hmm-t score E-value -------- ------- ----- ----- ----- ----- ----- ------- Ribosomal_L35Ae 1/1 27 124 .. 1 106 [] 262.2 7.1e-75 Alignments of top-scoring domains: Ribosomal_L35Ae: domain 1 of 1, from 27 to 124: score 262.2, E = 7.1e-75 *->LyvKgiflsYkRskRnQhenvsLiKiEGVnsreeAsFYlGKRvaYlY vK+if++YkR++RnQ+e+++L+KiEGV++r+e++FYlGKR+aY+Y Rabbit4Lib 27 --VKAIFAGYKRGLRNQREHTALLKIEGVYARDETEFYLGKRCAYVY 71 KAknevrksGHTVaPGGkPtktRviWGKitRvHGNsGaVRAkFrkNLPak KAkn+ TV+PGGkP+ktRviWGK+tR+HGNsG+VRAkFr+NLPak Rabbit4Lib 72 KAKNN------TVTPGGKPNKTRVIWGKVTRAHGNSGMVRAKFRSNLPAK 115 AlGdrvRil<-* A+G+r+R++ Rabbit4Lib 116 AIGHRIRVM 124 // Query: Rabbit4Lib.72.C3 280 1 402 nseq=35; translated Scores for sequence family classification (score includes all domains): Model Description Score E-value N -------- ----------- ----- ------- --- Ribosomal_L35Ae Ribosomal protein L35Ae 262.2 7.1e-75 1 Parsed for domains: Model Domain seq-f seq-t hmm-f hmm-t score E-value -------- ------- ----- ----- ----- ----- ----- ------- Ribosomal_L35Ae 1/1 30 127 .. 1 106 [] 262.2 7.1e-75 Alignments of top-scoring domains: Ribosomal_L35Ae: domain 1 of 1, from 30 to 127: score 262.2, E = 7.1e-75 *->LyvKgiflsYkRskRnQhenvsLiKiEGVnsreeAsFYlGKRvaYlY vK+if++YkR++RnQ+e+++L+KiEGV++r+e++FYlGKR+aY+Y Rabbit4Lib 30 --VKAIFAGYKRGLRNQREHTALLKIEGVYARDETEFYLGKRCAYVY 74 KAknevrksGHTVaPGGkPtktRviWGKitRvHGNsGaVRAkFrkNLPak KAkn+ TV+PGGkP+ktRviWGK+tR+HGNsG+VRAkFr+NLPak Rabbit4Lib 75 KAKNN------TVTPGGKPNKTRVIWGKVTRAHGNSGMVRAKFRSNLPAK 118 AlGdrvRil<-* A+G+r+R++ Rabbit4Lib 119 AIGHRIRVM 127 // Query: Rabbit4Lib.72.C4 232 1 415 nseq=4; minus strand; translated Scores for sequence family classification (score includes all domains): Model Description Score E-value N -------- ----------- ----- ------- --- Ribosomal_L35Ae Ribosomal protein L35Ae 262.2 7.1e-75 1 Parsed for domains: Model Domain seq-f seq-t hmm-f hmm-t score E-value -------- ------- ----- ----- ----- ----- ----- ------- Ribosomal_L35Ae 1/1 35 132 .. 1 106 [] 262.2 7.1e-75 Alignments of top-scoring domains: Ribosomal_L35Ae: domain 1 of 1, from 35 to 132: score 262.2, E = 7.1e-75 *->LyvKgiflsYkRskRnQhenvsLiKiEGVnsreeAsFYlGKRvaYlY vK+if++YkR++RnQ+e+++L+KiEGV++r+e++FYlGKR+aY+Y Rabbit4Lib 35 --VKAIFAGYKRGLRNQREHTALLKIEGVYARDETEFYLGKRCAYVY 79 KAknevrksGHTVaPGGkPtktRviWGKitRvHGNsGaVRAkFrkNLPak KAkn+ TV+PGGkP+ktRviWGK+tR+HGNsG+VRAkFr+NLPak Rabbit4Lib 80 KAKNN------TVTPGGKPNKTRVIWGKVTRAHGNSGMVRAKFRSNLPAK 123 AlGdrvRil<-* A+G+r+R++ Rabbit4Lib 124 AIGHRIRVM 132 // Query: Rabbit4Lib.72.C5 466 73 668 nseq=2; minus strand; translated Scores for sequence family classification (score includes all domains): Model Description Score E-value N -------- ----------- ----- ------- --- Zip ZIP Zinc transporter 150.7 2.6e-41 1 DUF125 Integral membrane protein DUF125 -69.3 9.9 1 Parsed for domains: Model Domain seq-f seq-t hmm-f hmm-t score E-value -------- ------- ----- ----- ----- ----- ----- ------- Zip 1/1 2 186 .. 1 381 [] 150.7 2.6e-41 DUF125 1/1 43 191 .. 1 220 [] -69.3 9.9 Alignments of top-scoring domains: Zip: domain 1 of 1, from 2 to 186: score 150.7, E = 2.6e-41 *->lllkiyaifalliisllggllplllplikstttendlrrsskllsfl + i++i ++ ++ l ++ Rabbit4Lib 2 TTTIIFSITTTTRTTTLTVTVS------XY----------------- 25 laFAaGvlLgtaflHLLPealealghkhshhhhhesseeledspsgefpf ++e l Rabbit4Lib 26 -------------------SREEL-------------------------- 30 agllvllGfllfllvEklltllkgepcveskggghghshgeelssaetge k ++ Rabbit4Lib 31 ----------------------KD---------AGI-------------- 35 spessheeaaedvealesevesskekhedshelehvldksksteeeskdk Rabbit4Lib - -------------------------------------------------- - nahghchHghhvsnvrsvqlryrliawllllglilHnffdGLAiGasfss + aw++++g++lHnf dGLAiGa+f++ Rabbit4Lib 36 ----------------------ATLAWMVIMGDGLHNFSDGLAIGAAFTE 63 stilGislfiAvlfHelphglGlgaiLlqagfsrkkAvPwllqllfaltt + + G+s+++Av++Helph+lG++a+Ll+ag+++k+Av l++ l+a+++ Rabbit4Lib 64 GLSSGLSTSVAVFCHELPHELGDFAVLLKAGMTVKQAV--LYNALSAMLA 111 piGiaiGigisrtsydsnspgadivsgillafsAGtflYvAlvellPeel ++G+a Gi+i +++a++vs +++a++AG+f+YvAlv+++Pe+l Rabbit4Lib 112 YLGMATGIFI--------GHYAENVSMWIFALTAGLFMYVALVDMVPEML 153 asseenetgssslklsllqllalllGfalMalia<-* +++ +++ g+s++++++lq++++llGf++M+li+ Rabbit4Lib 154 HNDASDH-GCSRWGYFFLQNAGILLGFGIMLLIS 186 DUF125: domain 1 of 1, from 43 to 191: score -69.3, E = 9.9 *->ilRafVlGanDGlvsvlglvaGvagagasplvvllaGlaglvaggAl i++++ ++DGl ++G a + ++++ +l Rabbit4Lib 43 IMGDGLHNFSDGL------AIG-------------AAFTEGLS-SGL 69 SMHaiGEYlSvkserdteeaelkkeerelkkspedekaeLaeiYverGis S ++ + ++ + + a l Rabbit4Lib 70 ST-SVAVFCHELPHELGDFAVL---------------------------- 90 eelArevAeqLmaneedaLelhareelgidkevlesplkaAlasgiafil + + + ++a+l+ +++ l Rabbit4Lib 91 -----------------------LKAG-------MTVKQAVLYNALSAML 110 GaliPllPylfisykmlpgllaliasiilallaLfilGfviaklsgasvl + l + ++ g++a +s + +l+ +++ +++a++ + + Rabbit4Lib 111 AYLGMATGIFI-------GHYAENVSMWIFALTAGLF-MYVALV---DMV 149 ksalrm...................vilGllAaaltyllGkl<-* ++l ++ ++++ ++ + ++ +++lG++ ++l ++ Rabbit4Lib 150 PEMLHNdasdhgcsrwgyfflqnagILLGFGIMLLISIFEHK 191 // Query: Rabbit4Lib.75.C1 774 1 559 nseq=3; minus strand; translated Scores for sequence family classification (score includes all domains): Model Description Score E-value N -------- ----------- ----- ------- --- Ribosomal_L5_C ribosomal L5P family C-terminus 211.9 9.6e-60 1 Ribosomal_L5 Ribosomal protein L5 89.7 6e-23 1 Parsed for domains: Model Domain seq-f seq-t hmm-f hmm-t score E-value -------- ------- ----- ----- ----- ----- ----- ------- Ribosomal_L5 1/1 18 71 .. 1 60 [] 89.7 6e-23 Ribosomal_L5_C 1/1 75 174 .. 1 109 [] 211.9 9.6e-60 Alignments of top-scoring domains: Ribosomal_L5: domain 1 of 1, from 18 to 71: score 89.7, E = 6e-23 *->NvNTMqvPkPleKiViNmGvGEagddkkiLekaakeLeeItGQKPvv N+ M++ + + K+ +N++vGE+gd+ L++aak+Le++tGQ Pv+ Rabbit4Lib 18 NP--MRELR-IRKLCLNICVGESGDR---LTRAAKVLEQLTGQTPVF 58 TkAKkSianFKiR<-* +kA++++++F+iR Rabbit4Lib 59 SKARYTVRSFGIR 71 Ribosomal_L5_C: domain 1 of 1, from 75 to 174: score 211.9, E = 9.6e-60 *->pIGvkVTLRGekaeeFLekllnlaLPrvrdfrglslykrsFDgtGNF +I+v++T+RG+kaee+Lek+l +vr+++++ k++F++tGNF Rabbit4Lib 75 KIAVHCTVRGAKAEEILEKGL-----KVREYELR---KNNFSDTGNF 113 sfGikEhiiFPeikYDpsigIyGMDitvVleRPGyRvakrdrersrvgna +fGi+Ehi++ +ikYDpsigIyG+D++vVl+RPG+ +a ++r+++++g++ Rabbit4Lib 114 GFGIQEHIDL-GIKYDPSIGIYGLDFYVVLGRPGFSIADKKRRTGCIGAK 162 hrLlkelaipFf<-* hr++ke+a+ +f Rabbit4Lib 163 HRISKEEAMRWF 174 // Query: Rabbit4Lib.75.C2 782 1 538 nseq=5; minus strand; translated Scores for sequence family classification (score includes all domains): Model Description Score E-value N -------- ----------- ----- ------- --- Ribosomal_L5_C ribosomal L5P family C-terminus 211.9 9.6e-60 1 Ribosomal_L5 Ribosomal protein L5 89.7 6e-23 1 Parsed for domains: Model Domain seq-f seq-t hmm-f hmm-t score E-value -------- ------- ----- ----- ----- ----- ----- ------- Ribosomal_L5 1/1 11 64 .. 1 60 [] 89.7 6e-23 Ribosomal_L5_C 1/1 68 167 .. 1 109 [] 211.9 9.6e-60 Alignments of top-scoring domains: Ribosomal_L5: domain 1 of 1, from 11 to 64: score 89.7, E = 6e-23 *->NvNTMqvPkPleKiViNmGvGEagddkkiLekaakeLeeItGQKPvv N+ M++ + + K+ +N++vGE+gd+ L++aak+Le++tGQ Pv+ Rabbit4Lib 11 NP--MRELR-IRKLCLNICVGESGDR---LTRAAKVLEQLTGQTPVF 51 TkAKkSianFKiR<-* +kA++++++F+iR Rabbit4Lib 52 SKARYTVRSFGIR 64 Ribosomal_L5_C: domain 1 of 1, from 68 to 167: score 211.9, E = 9.6e-60 *->pIGvkVTLRGekaeeFLekllnlaLPrvrdfrglslykrsFDgtGNF +I+v++T+RG+kaee+Lek+l +vr+++++ k++F++tGNF Rabbit4Lib 68 KIAVHCTVRGAKAEEILEKGL-----KVREYELR---KNNFSDTGNF 106 sfGikEhiiFPeikYDpsigIyGMDitvVleRPGyRvakrdrersrvgna +fGi+Ehi++ +ikYDpsigIyG+D++vVl+RPG+ +a ++r+++++g++ Rabbit4Lib 107 GFGIQEHIDL-GIKYDPSIGIYGLDFYVVLGRPGFSIADKKRRTGCIGAK 155 hrLlkelaipFf<-* hr++ke+a+ +f Rabbit4Lib 156 HRISKEEAMRWF 167 // Query: Rabbit4Lib.75.C3 786 1 525 nseq=2; minus strand; translated Scores for sequence family classification (score includes all domains): Model Description Score E-value N -------- ----------- ----- ------- --- Ribosomal_L5_C ribosomal L5P family C-terminus 211.9 9.6e-60 1 Ribosomal_L5 Ribosomal protein L5 89.7 6e-23 1 Parsed for domains: Model Domain seq-f seq-t hmm-f hmm-t score E-value -------- ------- ----- ----- ----- ----- ----- ------- Ribosomal_L5 1/1 6 59 .. 1 60 [] 89.7 6e-23 Ribosomal_L5_C 1/1 63 162 .. 1 109 [] 211.9 9.6e-60 Alignments of top-scoring domains: Ribosomal_L5: domain 1 of 1, from 6 to 59: score 89.7, E = 6e-23 *->NvNTMqvPkPleKiViNmGvGEagddkkiLekaakeLeeItGQKPvv N+ M++ + + K+ +N++vGE+gd+ L++aak+Le++tGQ Pv+ Rabbit4Lib 6 NP--MRELR-IRKLCLNICVGESGDR---LTRAAKVLEQLTGQTPVF 46 TkAKkSianFKiR<-* +kA++++++F+iR Rabbit4Lib 47 SKARYTVRSFGIR 59 Ribosomal_L5_C: domain 1 of 1, from 63 to 162: score 211.9, E = 9.6e-60 *->pIGvkVTLRGekaeeFLekllnlaLPrvrdfrglslykrsFDgtGNF +I+v++T+RG+kaee+Lek+l +vr+++++ k++F++tGNF Rabbit4Lib 63 KIAVHCTVRGAKAEEILEKGL-----KVREYELR---KNNFSDTGNF 101 sfGikEhiiFPeikYDpsigIyGMDitvVleRPGyRvakrdrersrvgna +fGi+Ehi++ +ikYDpsigIyG+D++vVl+RPG+ +a ++r+++++g++ Rabbit4Lib 102 GFGIQEHIDL-GIKYDPSIGIYGLDFYVVLGRPGFSIADKKRRTGCIGAK 150 hrLlkelaipFf<-* hr++ke+a+ +f Rabbit4Lib 151 HRISKEEAMRWF 162 // Query: Rabbit4Lib.75.C4 848 1 555 nseq=3; minus strand; translated Scores for sequence family classification (score includes all domains): Model Description Score E-value N -------- ----------- ----- ------- --- Ribosomal_L5_C ribosomal L5P family C-terminus 211.9 9.6e-60 1 Ribosomal_L5 Ribosomal protein L5 89.7 6e-23 1 Parsed for domains: Model Domain seq-f seq-t hmm-f hmm-t score E-value -------- ------- ----- ----- ----- ----- ----- ------- Ribosomal_L5 1/1 16 69 .. 1 60 [] 89.7 6e-23 Ribosomal_L5_C 1/1 73 172 .. 1 109 [] 211.9 9.6e-60 Alignments of top-scoring domains: Ribosomal_L5: domain 1 of 1, from 16 to 69: score 89.7, E = 6e-23 *->NvNTMqvPkPleKiViNmGvGEagddkkiLekaakeLeeItGQKPvv N+ M++ + + K+ +N++vGE+gd+ L++aak+Le++tGQ Pv+ Rabbit4Lib 16 NP--MRELR-IRKLCLNICVGESGDR---LTRAAKVLEQLTGQTPVF 56 TkAKkSianFKiR<-* +kA++++++F+iR Rabbit4Lib 57 SKARYTVRSFGIR 69 Ribosomal_L5_C: domain 1 of 1, from 73 to 172: score 211.9, E = 9.6e-60 *->pIGvkVTLRGekaeeFLekllnlaLPrvrdfrglslykrsFDgtGNF +I+v++T+RG+kaee+Lek+l +vr+++++ k++F++tGNF Rabbit4Lib 73 KIAVHCTVRGAKAEEILEKGL-----KVREYELR---KNNFSDTGNF 111 sfGikEhiiFPeikYDpsigIyGMDitvVleRPGyRvakrdrersrvgna +fGi+Ehi++ +ikYDpsigIyG+D++vVl+RPG+ +a ++r+++++g++ Rabbit4Lib 112 GFGIQEHIDL-GIKYDPSIGIYGLDFYVVLGRPGFSIADKKRRTGCIGAK 160 hrLlkelaipFf<-* hr++ke+a+ +f Rabbit4Lib 161 HRISKEEAMRWF 172 // Query: Rabbit4Lib.75.C5 1005 20 921 nseq=4; minus strand; translated Scores for sequence family classification (score includes all domains): Model Description Score E-value N -------- ----------- ----- ------- --- Ribosomal_L6e Ribosomal protein L6e 252.9 4.5e-72 1 Ribosomal_L6e_N Ribosomal protein L6, N-terminal doma 120.8 2.6e-32 1 Parsed for domains: Model Domain seq-f seq-t hmm-f hmm-t score E-value -------- ------- ----- ----- ----- ----- ----- ------- Ribosomal_L6e_N 1/1 37 99 .. 1 63 [] 120.8 2.6e-32 Ribosomal_L6e 1/1 184 291 .. 1 114 [] 252.9 4.5e-72 Alignments of top-scoring domains: Ribosomal_L6e_N: domain 1 of 1, from 37 to 99: score 120.8, E = 2.6e-32 *->kaakkrkphvsRNPvLvRGIGrYSrSaMYhrRaLYkiKtkakkggVf k++kk+kph+sRNPvLvRGIGrYSrSaMY+r+aLYk+K+ a k+ ++ Rabbit4Lib 37 KKPKKGKPHCSRNPVLVRGIGRYSRSAMYSRKALYKRKYAAPKSRIE 83 kkKhkeKvkakvsKpv<-* +kK+ eKv+a+v+Kpv Rabbit4Lib 84 RKKKREKVLATVTKPV 99 Ribosomal_L6e: domain 1 of 1, from 184 to 291: score 252.9, E = 4.5e-72 *->vNGVPLRRVnQrYVIATStPKVDVSgVkVeKHfnDaYFkKkKakkak +N+VPLRR++Q++VIATSt K+D+SgVk++KH++DaYFkKkK++k++ Rabbit4Lib 184 LNRVPLRRTHQKFVIATST-KIDISGVKIPKHLTDAYFKKKKLRKPR 229 KkGEaeiFaaekekynvikeeRKkDQKaVDaaLLaaIKavPelKFlaaYL ++ E+eiF++ekeky +i+e+RK DQKaVD+++L++IKavP+l+ +YL Rabbit4Lib 230 HQ-EGEIFDTEKEKY-EITEQRKVDQKAVDSQILPKIKAVPQLQ---GYL 274 garFSLknGqyPHkmkF<-* ++ F+L+nG yPHk+ Rabbit4Lib 275 RSVFALTNGVYPHKLXV 291 // Query: Rabbit4Lib.75.C6 803 1 544 nseq=6; translated Scores for sequence family classification (score includes all domains): Model Description Score E-value N -------- ----------- ----- ------- --- Ribosomal_L5_C ribosomal L5P family C-terminus 211.9 9.6e-60 1 Ribosomal_L5 Ribosomal protein L5 89.7 6e-23 1 Parsed for domains: Model Domain seq-f seq-t hmm-f hmm-t score E-value -------- ------- ----- ----- ----- ----- ----- ------- Ribosomal_L5 1/1 13 66 .. 1 60 [] 89.7 6e-23 Ribosomal_L5_C 1/1 70 169 .. 1 109 [] 211.9 9.6e-60 Alignments of top-scoring domains: Ribosomal_L5: domain 1 of 1, from 13 to 66: score 89.7, E = 6e-23 *->NvNTMqvPkPleKiViNmGvGEagddkkiLekaakeLeeItGQKPvv N+ M++ + + K+ +N++vGE+gd+ L++aak+Le++tGQ Pv+ Rabbit4Lib 13 NP--MRELR-IRKLCLNICVGESGDR---LTRAAKVLEQLTGQTPVF 53 TkAKkSianFKiR<-* +kA++++++F+iR Rabbit4Lib 54 SKARYTVRSFGIR 66 Ribosomal_L5_C: domain 1 of 1, from 70 to 169: score 211.9, E = 9.6e-60 *->pIGvkVTLRGekaeeFLekllnlaLPrvrdfrglslykrsFDgtGNF +I+v++T+RG+kaee+Lek+l +vr+++++ k++F++tGNF Rabbit4Lib 70 KIAVHCTVRGAKAEEILEKGL-----KVREYELR---KNNFSDTGNF 108 sfGikEhiiFPeikYDpsigIyGMDitvVleRPGyRvakrdrersrvgna +fGi+Ehi++ +ikYDpsigIyG+D++vVl+RPG+ +a ++r+++++g++ Rabbit4Lib 109 GFGIQEHIDL-GIKYDPSIGIYGLDFYVVLGRPGFSIADKKRRTGCIGAK 157 hrLlkelaipFf<-* hr++ke+a+ +f Rabbit4Lib 158 HRISKEEAMRWF 169 // Query: Rabbit4Lib.75.C7 916 19 555 nseq=15; translated Scores for sequence family classification (score includes all domains): Model Description Score E-value N -------- ----------- ----- ------- --- Ribosomal_L5_C ribosomal L5P family C-terminus 211.9 9.6e-60 1 Ribosomal_L5 Ribosomal protein L5 89.7 6e-23 1 Parsed for domains: Model Domain seq-f seq-t hmm-f hmm-t score E-value -------- ------- ----- ----- ----- ----- ----- ------- Ribosomal_L5 1/1 10 63 .. 1 60 [] 89.7 6e-23 Ribosomal_L5_C 1/1 67 166 .. 1 109 [] 211.9 9.6e-60 Alignments of top-scoring domains: Ribosomal_L5: domain 1 of 1, from 10 to 63: score 89.7, E = 6e-23 *->NvNTMqvPkPleKiViNmGvGEagddkkiLekaakeLeeItGQKPvv N+ M++ + + K+ +N++vGE+gd+ L++aak+Le++tGQ Pv+ Rabbit4Lib 10 NP--MRELR-IRKLCLNICVGESGDR---LTRAAKVLEQLTGQTPVF 50 TkAKkSianFKiR<-* +kA++++++F+iR Rabbit4Lib 51 SKARYTVRSFGIR 63 Ribosomal_L5_C: domain 1 of 1, from 67 to 166: score 211.9, E = 9.6e-60 *->pIGvkVTLRGekaeeFLekllnlaLPrvrdfrglslykrsFDgtGNF +I+v++T+RG+kaee+Lek+l +vr+++++ k++F++tGNF Rabbit4Lib 67 KIAVHCTVRGAKAEEILEKGL-----KVREYELR---KNNFSDTGNF 105 sfGikEhiiFPeikYDpsigIyGMDitvVleRPGyRvakrdrersrvgna +fGi+Ehi++ +ikYDpsigIyG+D++vVl+RPG+ +a ++r+++++g++ Rabbit4Lib 106 GFGIQEHIDL-GIKYDPSIGIYGLDFYVVLGRPGFSIADKKRRTGCIGAK 154 hrLlkelaipFf<-* hr++ke+a+ +f Rabbit4Lib 155 HRISKEEAMRWF 166 // Query: Rabbit4Lib.77.C1 208 69 397 nseq=4; minus strand; translated Scores for sequence family classification (score includes all domains): Model Description Score E-value N -------- ----------- ----- ------- --- ubiquitin Ubiquitin family 43.5 4.8e-09 1 Parsed for domains: Model Domain seq-f seq-t hmm-f hmm-t score E-value -------- ------- ----- ----- ----- ----- ----- ------- ubiquitin 1/1 1 75 [. 1 83 [] 43.5 4.8e-09 Alignments of top-scoring domains: ubiquitin: domain 1 of 1, from 1 to 75: score 43.5, E = 4.8e-09 *->mkifVKtldgkg.kvtdgstitlevdpsdTVlelKekIedkegippe +i V ++d g+kv+ +++ t +dT+ +lK++I++++g + Rabbit4Lib 1 -MIEVVCNDRLGkKVR-VKCNT-----DDTIGDLKKLIAAQTGTRWN 40 qQrLiyaGkvLreDdktLaeYniqdgsftlhlvlrlr<-* +++L + + +D+ +L++Y+i+dg l+l+ + Rabbit4Lib 41 KIVLKKWYTIF-KDHVSLGDYEIHDGM-NLELYYQXE 75 // Query: Rabbit4Lib.80.C1 721 1 761 nseq=2; minus strand; translated Scores for sequence family classification (score includes all domains): Model Description Score E-value N -------- ----------- ----- ------- --- Proteasome Proteasome A-type and B-type 223.6 2.9e-63 1 Parsed for domains: Model Domain seq-f seq-t hmm-f hmm-t score E-value -------- ------- ----- ----- ----- ----- ----- ------- Proteasome 1/1 31 215 .. 1 194 [] 223.6 2.9e-63 Alignments of top-scoring domains: Proteasome: domain 1 of 1, from 31 to 215: score 223.6, E = 2.9e-63 *->vktGtTivGikgkdGVVlAaDkRatlGskllskdtveKifkiyddhi v++ +++Gi++kdGVV++++k + skl+++++++++f + d h+ Rabbit4Lib 31 VEN--SAIGIRCKDGVVFGVEKLVL--SKLYEEGSNKRLFNV-DRHV 72 gcafaGlaADartlvdyaraeaqlyrlrygepipvevLvkriadllqvyt g+a+aGl ADar l+d+ar ea ++r ++g++ip+++L+ r+a ++++yt Rabbit4Lib 73 GMAVAGLLADARSLADIAREEASNFRSNFGYNIPLKHLADRVAMYVHAYT 122 qysgrrPfgvslliaGvDekggPhLyqiDpsGsvieykdnatAiGgSGsq +ys +rPfg+s++++ + +++g +Ly+iDpsG +++y ++AiG +++q Rabbit4Lib 123 LYSAVRPFGCSFMLGSYSVNDGAQLYMIDPSGVSYGY--WGCAIG-KARQ 169 yAygvLEklykredmtleeaielavkAlkeaierdalsggnievavi<-* +A++++Ekl ++mt+ + ++ + k++++++++ + + ++e+ ++ Rabbit4Lib 170 AAKTEIEKLQ-MKEMTCRDVVKEVAKIIYIVHDEVKDKAFELELSWV 215 // Query: Rabbit4Lib.80.C2 489 1 440 nseq=3; minus strand; translated Scores for sequence family classification (score includes all domains): Model Description Score E-value N -------- ----------- ----- ------- --- Proteasome Proteasome A-type and B-type -7.3 0.0012 1 Parsed for domains: Model Domain seq-f seq-t hmm-f hmm-t score E-value -------- ------- ----- ----- ----- ----- ----- ------- Proteasome 1/1 2 108 .. 1 194 [] -7.3 0.0012 Alignments of top-scoring domains: Proteasome: domain 1 of 1, from 2 to 108: score -7.3, E = 0.0012 *->vktGtTivGikgkdGVVlAaDkRatlGskllskdtveKifkiyddhi ++ + ++ Rabbit4Lib 2 TR----------------------P------DRV--------A---- 8 gcafaGlaADartlvdyaraeaqlyrlrygepipvevLvkriadllqvyt + v+ +yt Rabbit4Lib 9 --------------------------------MYVH-----------AYT 15 qysgrrPfgvslliaGvDekggPhLyqiDpsGsvieykdnatAiGgSGsq +ys +rPfg+s++++ + +++g +Ly+iDpsG +++y ++AiG +++q Rabbit4Lib 16 LYSAVRPFGCSFMLGSYSVNDGAQLYMIDPSGVSYGY--WGCAIG-KARQ 62 yAygvLEklykredmtleeaielavkAlkeaierdalsggnievavi<-* +A++++Ekl ++mt+ + ++ + k++++++++ + + ++e+ ++ Rabbit4Lib 63 AAKTEIEKLQ-MKEMTCRDVVKEVAKIIYIVHDEVKDKAFELELSWV 108 // Query: Rabbit4Lib.81.C1 118 73 391 nseq=4; minus strand; translated Scores for sequence family classification (score includes all domains): Model Description Score E-value N -------- ----------- ----- ------- --- Ribosomal_S11 Ribosomal protein S11 13.6 1.4e-05 1 Parsed for domains: Model Domain seq-f seq-t hmm-f hmm-t score E-value -------- ------- ----- ----- ----- ----- ----- ------- Ribosomal_S11 1/1 31 104 .. 1 124 [] 13.6 1.4e-05 Alignments of top-scoring domains: Ribosomal_S11: domain 1 of 1, from 31 to 104: score 13.6, E = 1.4e-05 *->GiaHIqasFSKKRNNTIiTiTDvkGrvvlwsSAGscGfKgsRdKsTP a I+asF N+T++++TD ++++ +G++++K++Rd+ Rabbit4Lib 31 --AXIFASF----NDTFVHVTDFLXKETIAEXTGGMKVKADRDEXLA 71 yAAqtaAenaAkkaieqGikaveVkikatGGnktktpGpGreaalRALar AA++aA++ + ++e+Gi+a+++k++atG Rabbit4Lib 72 IAAMLAAQDEFRGCKELGITALHIKFRATG-------------------- 101 sGLiItrIrDVTPlPHGnGcRpPKkRR<-* Gn R Rabbit4Lib 102 ----------------GN--------R 104 // Query: Rabbit4Lib.81.C2 180 39 366 nseq=9; minus strand; translated Scores for sequence family classification (score includes all domains): Model Description Score E-value N -------- ----------- ----- ------- --- Ribosomal_S11 Ribosomal protein S11 20.7 3.7e-06 1 Parsed for domains: Model Domain seq-f seq-t hmm-f hmm-t score E-value -------- ------- ----- ----- ----- ----- ----- ------- Ribosomal_S11 1/1 32 107 .. 1 124 [] 20.7 3.7e-06 Alignments of top-scoring domains: Ribosomal_S11: domain 1 of 1, from 32 to 107: score 20.7, E = 3.7e-06 *->GiaHIqasFSKKRNNTIiTiTDvkGrvvlwsSAGscGfKgsRdKsTP G+ HI+asF N+T++++TD ++++ +G++++K++Rd+ Rabbit4Lib 32 GVCHIFASF----NDTFVHVTDFLXKETIAEXTGGMKVKADRDEXLA 74 yAAqtaAenaAkkaieqGikaveVkikatGGnktktpGpGreaalRALar AA+ +A++++e+Gi+a+++k++atG Rabbit4Lib 75 IAAMXGRPGVAQRCKELGITALHIKLRATG-------------------- 104 sGLiItrIrDVTPlPHGnGcRpPKkRR<-* Gn R Rabbit4Lib 105 ----------------GN--------R 107 // Query: Rabbit4Lib.81.C3 142 83 401 nseq=3; minus strand; translated Scores for sequence family classification (score includes all domains): Model Description Score E-value N -------- ----------- ----- ------- --- Ribosomal_S11 Ribosomal protein S11 20.7 3.7e-06 1 Parsed for domains: Model Domain seq-f seq-t hmm-f hmm-t score E-value -------- ------- ----- ----- ----- ----- ----- ------- Ribosomal_S11 1/1 29 104 .. 1 124 [] 20.7 3.7e-06 Alignments of top-scoring domains: Ribosomal_S11: domain 1 of 1, from 29 to 104: score 20.7, E = 3.7e-06 *->GiaHIqasFSKKRNNTIiTiTDvkGrvvlwsSAGscGfKgsRdKsTP G+ HI+asF N+T++++TD ++++ +G++++K++Rd+ Rabbit4Lib 29 GVCHIFASF----NDTFVHVTDFLXKETIAEXTGGMKVKADRDEXLA 71 yAAqtaAenaAkkaieqGikaveVkikatGGnktktpGpGreaalRALar AA+ +A++++e+Gi+a+++k++atG Rabbit4Lib 72 IAAMXGRPGVAQRCKELGITALHIKLRATG-------------------- 101 sGLiItrIrDVTPlPHGnGcRpPKkRR<-* Gn R Rabbit4Lib 102 ----------------GN--------R 104 // Query: Rabbit4Lib.82.C1 354 53 291 nseq=4; minus strand; translated Scores for sequence family classification (score includes all domains): Model Description Score E-value N -------- ----------- ----- ------- --- COX6C Cytochrome c oxidase subunit VIc 159.3 6.5e-44 1 Parsed for domains: Model Domain seq-f seq-t hmm-f hmm-t score E-value -------- ------- ----- ----- ----- ----- ----- ------- COX6C 1/1 3 75 .. 1 73 [] 159.3 6.5e-44 Alignments of top-scoring domains: COX6C: domain 1 of 1, from 3 to 75: score 159.3, E = 6.5e-44 *->atslakPqmrgllarrlrrhlavafvlslgvaaaYKflvadprKkAY + +lakPqmrglla+rlr+h+++af +sl vaa+YKf+va+prKkAY Rabbit4Lib 3 PSALAKPQMRGLLAKRLRFHIVGAFAVSLSVAALYKFAVAEPRKKAY 49 ADFYrnYDamKdFeeMrkAGiFqSvK<-* ADFYrnYD+mKdFeeM+kAG +K Rabbit4Lib 50 ADFYRNYDSMKDFEEMKKAGYLPECK 75 // Query: Rabbit4Lib.82.C2 561 56 583 nseq=7; minus strand; translated Scores for sequence family classification (score includes all domains): Model Description Score E-value N -------- ----------- ----- ------- --- S10_plectin Plectin/S10 domain 248.6 8.5e-71 1 Parsed for domains: Model Domain seq-f seq-t hmm-f hmm-t score E-value -------- ------- ----- ----- ----- ----- ----- ------- S10_plectin 1/1 3 101 .. 1 97 [] 248.6 8.5e-71 Alignments of top-scoring domains: S10_plectin: domain 1 of 1, from 3 to 101: score 248.6, E = 8.5e-71 *->IPKenRkaIYeyLFkEGVlVAKKDfnlakHPeid..gVpNLqViKaL +PK+nR aIYe LFkEGV+VAKKD + +kHPe+ +++VpNL+V+Ka+ Rabbit4Lib 3 MPKKNRIAIYELLFKEGVMVAKKDVHMPKHPELAdkNVPNLHVMKAM 49 qSLkSRgyVkEqFaWrhyYWyLTnEGIeYLReYLhLPpeIVPATlKkqar qSLkSRgyVkEqFaWrh+YWyLTnEGI+YLR+YLhLPpeIVPATl +++ Rabbit4Lib 50 QSLKSRGYVKEQFAWRHFYWYLTNEGIQYLRDYLHLPPEIVPATLRRSRX 99 pa<-* + Rabbit4Lib 100 RD 101 // Query: Rabbit4Lib.82.C3 354 37 275 nseq=3; minus strand; translated Scores for sequence family classification (score includes all domains): Model Description Score E-value N -------- ----------- ----- ------- --- COX6C Cytochrome c oxidase subunit VIc 159.3 6.5e-44 1 Parsed for domains: Model Domain seq-f seq-t hmm-f hmm-t score E-value -------- ------- ----- ----- ----- ----- ----- ------- COX6C 1/1 3 75 .. 1 73 [] 159.3 6.5e-44 Alignments of top-scoring domains: COX6C: domain 1 of 1, from 3 to 75: score 159.3, E = 6.5e-44 *->atslakPqmrgllarrlrrhlavafvlslgvaaaYKflvadprKkAY + +lakPqmrglla+rlr+h+++af +sl vaa+YKf+va+prKkAY Rabbit4Lib 3 PSALAKPQMRGLLAKRLRFHIVGAFAVSLSVAALYKFAVAEPRKKAY 49 ADFYrnYDamKdFeeMrkAGiFqSvK<-* ADFYrnYD+mKdFeeM+kAG +K Rabbit4Lib 50 ADFYRNYDSMKDFEEMKKAGYLPECK 75 // Query: Rabbit4Lib.83.C1 452 1 341 nseq=3; translated Scores for sequence family classification (score includes all domains): Model Description Score E-value N -------- ----------- ----- ------- --- [no hits above thresholds] Parsed for domains: Model Domain seq-f seq-t hmm-f hmm-t score E-value -------- ------- ----- ----- ----- ----- ----- ------- [no hits above thresholds] Alignments of top-scoring domains: [no hits above thresholds] // Query: Rabbit4Lib.86.C1 168 1 229 nseq=3; minus strand; translated Scores for sequence family classification (score includes all domains): Model Description Score E-value N -------- ----------- ----- ------- --- TFIID-18kDa Transcription initiation factor IID, 18kD 111.3 1.8e-29 1 Parsed for domains: Model Domain seq-f seq-t hmm-f hmm-t score E-value -------- ------- ----- ----- ----- ----- ----- ------- TFIID-18kDa 1/1 1 70 [. 1 93 [] 111.3 1.8e-29 Alignments of top-scoring domains: TFIID-18kDa: domain 1 of 1, from 1 to 70: score 111.3, E = 1.8e-29 *->hlFrkeLqsMMYafGDdqnPlpeTvdllEeiVrgyiiEmllqAakva +p +vd+lE++V+++i+Em+++A++++ Rabbit4Lib 1 --------------------YPPSVDILEDLVIEFITEMTHKAMSIG 27 qnrGsrkitvEDlkFLiRkDpkKlgRvkeLLsmkellkkarKqfde<-* +++ +++vED++FLiRkDp+K++Rvk+LL+m+e+lk+arK+fde Rabbit4Lib 28 RQG---RVQVEDIVFLIRKDPRKFARVKDLLTMNEELKRARKAFDE 70 // Query: Rabbit4Lib.87.C1 636 1 493 nseq=2; minus strand; translated Scores for sequence family classification (score includes all domains): Model Description Score E-value N -------- ----------- ----- ------- --- [no hits above thresholds] Parsed for domains: Model Domain seq-f seq-t hmm-f hmm-t score E-value -------- ------- ----- ----- ----- ----- ----- ------- [no hits above thresholds] Alignments of top-scoring domains: [no hits above thresholds] // Query: Rabbit4Lib.89.C1 1293 39 1010 nseq=6; minus strand; translated Scores for sequence family classification (score includes all domains): Model Description Score E-value N -------- ----------- ----- ------- --- Annexin Annexin 439.1 3.9e-128 4 Parsed for domains: Model Domain seq-f seq-t hmm-f hmm-t score E-value -------- ------- ----- ----- ----- ----- ----- ------- Annexin 1/4 21 87 .. 1 67 [] 114.7 1.8e-30 Annexin 2/4 93 159 .. 1 67 [] 123.4 4.3e-33 Annexin 3/4 176 243 .. 1 67 [] 111.6 1.5e-29 Annexin 4/4 252 318 .. 1 67 [] 110.7 2.8e-29 Alignments of top-scoring domains: Annexin: domain 1 of 4, from 21 to 87: score 114.7, E = 1.8e-30 *->ayDAelLrkAmkGlGTDEdtlIrILatRsnaqlqaIkeaYkklygkd + DAe +rkA++G+GTDE+tlI ILa Rs aq+q+I ++Y++ ygk+ Rabbit4Lib 21 SVDAEAIRKAIRGIGTDEKTLISILAERSSAQRQLIVKEYQAAYGKE 67 LekdiksetSGdfeklLlaL<-* L +d+k+++SG+fe l++aL Rabbit4Lib 68 LKDDLKGDLSGHFEHLMVAL 87 Annexin: domain 2 of 4, from 93 to 159: score 123.4, E = 4.3e-33 *->ayDAelLrkAmkGlGTDEdtlIrILatRsnaqlqaIkeaYkklygkd +DA++L+k+mkG GTDEd+lI+IL+tR+ q+++I +aY + y+k+ Rabbit4Lib 93 VFDAKQLKKSMKGTGTDEDALIEILTTRTSRQMKEISQAYYTVYKKS 139 LekdiksetSGdfeklLlaL<-* L +di setSGdf+k+Ll+L Rabbit4Lib 140 LGDDISSETSGDFRKALLTL 159 Annexin: domain 3 of 4, from 176 to 243: score 111.6, E = 1.5e-29 *->ayDAe.lLrkAmkGlGTDEdtlIrILatRsnaqlqaIkeaYkklygk ++DA+ l++++++++GTDEd +++IL+ Rs ql++++++Y+++++k Rabbit4Lib 176 KKDAQiLYNAGENKWGTDEDKFTEILCLRSFLQLKLTFDEYRNISQK 222 dLekdiksetSGdfeklLlaL<-* d+e++ik+e+SG+fe+lLla+ Rabbit4Lib 223 DIEDSIKGELSGHFEDLLLAI 243 Annexin: domain 4 of 4, from 252 to 318: score 110.7, E = 2.8e-29 *->ayDAelLrkAmkGlGTDEdtlIrILatRsnaqlqaIkeaYkklygkd a+ A++L++A kG+GTDE tl+rI+++Rs+++l++I++++kk yg + Rabbit4Lib 252 AFLAARLYQALKGAGTDEFTLNRIMVSRSEIDLLDIRAEFKKQYGYS 298 LekdiksetSGdfeklLlaL<-* L+++iks+tSGd+e Ll + Rabbit4Lib 299 LYSAIKSDTSGDYEVTLLKI 318 // Query: Rabbit4Lib.91.C2 520 41 545 nseq=38; minus strand; translated Scores for sequence family classification (score includes all domains): Model Description Score E-value N -------- ----------- ----- ------- --- Ribosomal_L21e Ribosomal protein L21e 214.8 1.3e-60 1 Parsed for domains: Model Domain seq-f seq-t hmm-f hmm-t score E-value -------- ------- ----- ----- ----- ----- ----- ------- Ribosomal_L21e 1/1 2 100 .. 1 99 [] 214.8 1.3e-60 Alignments of top-scoring domains: Ribosomal_L21e: domain 1 of 1, from 2 to 100: score 214.8, E = 1.3e-60 *->pnSnGrrrgTRymfkrdFRkhGlsplstylreYKvGDyVdIkingSv +n +G+ + mf+r+FRkhG++pl+ty+r+YK+GD+VdIk++g+v Rabbit4Lib 2 TNXKGKEARYPDMFSRPFRKHGVVPLATYMRIYKKGDIVDIKGMGTV 48 qkGmPHKrFhGkTGrVyNVtkgavGvivnkkVrdrileKrInvrieHirp qkGmPHK++hGkTGrVyNVt++avG++vnk+V+++il+KrInvrieHi++ Rabbit4Lib 49 QKGMPHKCYHGKTGRVYNVTQHAVGIVVNKQVKGKILAKRINVRIEHIKH 98 sk<-* sk Rabbit4Lib 99 SK 100 // Query: Rabbit4Lib.91.C3 426 39 450 nseq=2; minus strand; translated Scores for sequence family classification (score includes all domains): Model Description Score E-value N -------- ----------- ----- ------- --- Ribosomal_L21e Ribosomal protein L21e 104.8 1.7e-27 1 Parsed for domains: Model Domain seq-f seq-t hmm-f hmm-t score E-value -------- ------- ----- ----- ----- ----- ----- ------- Ribosomal_L21e 1/1 2 69 .. 1 99 [] 104.8 1.7e-27 Alignments of top-scoring domains: Ribosomal_L21e: domain 1 of 1, from 2 to 69: score 104.8, E = 1.7e-27 *->pnSnGrrrgTRymfkrdFRkhGlsplstylreYKvGDyVdIkingSv +n++G++rgTRymf+r+FRkhG++pl+ty+r+Y Rabbit4Lib 2 TNTKGKKRGTRYMFSRPFRKHGVVPLATYMRIY-------------- 34 qkGmPHKrFhGkTGrVyNVtkgavGvivnkkVrdrileKrInvrieHirp NVt++avG++vnk+V+++il+KrInvrieHi++ Rabbit4Lib 35 -----------------NVTQHAVGIVVNKQVKGKILAKRINVRIEHIKH 67 sk<-* sk Rabbit4Lib 68 SK 69 // Query: Rabbit4Lib.91.C4 441 1 531 nseq=2; minus strand; translated Scores for sequence family classification (score includes all domains): Model Description Score E-value N -------- ----------- ----- ------- --- Ribosomal_L21e Ribosomal protein L21e 200.4 2.8e-56 1 Parsed for domains: Model Domain seq-f seq-t hmm-f hmm-t score E-value -------- ------- ----- ----- ----- ----- ----- ------- Ribosomal_L21e 1/1 11 109 .. 1 99 [] 200.4 2.8e-56 Alignments of top-scoring domains: Ribosomal_L21e: domain 1 of 1, from 11 to 109: score 200.4, E = 2.8e-56 *->pnSnGrrrgTRymfkrdFRkhGlsplstylreYKvGDyVdIkingSv +G+ + mf+r+FRkhG++pl+ty+r+YK+ D+VdIk++g+v Rabbit4Lib 11 DEHKGKEARYPDMFSRPFRKHGVVPLATYMRIYKKVDIVDIKGMGTV 57 qkGmPHKrFhGkTGrVyNVtkgavGvivnkkVrdrileKrInvrieHirp qkGmPHK++hGkTGrVyNVt++avG++vnk+V+++il+KrInvrieHi++ Rabbit4Lib 58 QKGMPHKCYHGKTGRVYNVTQHAVGIVVNKQVKGKILAKRINVRIEHIKH 107 sk<-* sk Rabbit4Lib 108 SK 109 // Query: Rabbit4Lib.94.C2 649 1 764 nseq=4; minus strand; translated Scores for sequence family classification (score includes all domains): Model Description Score E-value N -------- ----------- ----- ------- --- Ribosomal_L29e Ribosomal L29e protein family 35.0 1.8e-06 1 Parsed for domains: Model Domain seq-f seq-t hmm-f hmm-t score E-value -------- ------- ----- ----- ----- ----- ----- ------- Ribosomal_L29e 1/1 19 56 .. 1 39 [] 35.0 1.8e-06 Alignments of top-scoring domains: Ribosomal_L29e: domain 1 of 1, from 19 to 56: score 35.0, E = 1.8e-06 *->sKnHtnHnq....nkKahRnGikkpkkkryeslkgvDaKflrn<-* sKnHt+Hnq++++++ a Rn i+k eslkgvD+Kflrn Rabbit4Lib 19 SKNHTTHNQpengTEMASRNPITKN-----ESLKGVDPKFLRN 56 // Query: Rabbit4Lib.94.C3 784 14 677 nseq=5; minus strand; translated Scores for sequence family classification (score includes all domains): Model Description Score E-value N -------- ----------- ----- ------- --- [no hits above thresholds] Parsed for domains: Model Domain seq-f seq-t hmm-f hmm-t score E-value -------- ------- ----- ----- ----- ----- ----- ------- [no hits above thresholds] Alignments of top-scoring domains: [no hits above thresholds] // Query: Rabbit4Lib.97.C1 488 1 1018 nseq=3; minus strand; translated Scores for sequence family classification (score includes all domains): Model Description Score E-value N -------- ----------- ----- ------- --- DUF1448 Protein of unknown function (DUF1448) 839.3 1.3e-248 1 GRAM GRAM domain 11.5 0.11 1 Parsed for domains: Model Domain seq-f seq-t hmm-f hmm-t score E-value -------- ------- ----- ----- ----- ----- ----- ------- GRAM 1/1 145 213 .. 1 82 [] 11.5 0.11 DUF1448 1/1 6 335 .. 1 375 [] 839.3 1.3e-248 Alignments of top-scoring domains: GRAM: domain 1 of 1, from 145 to 213: score 11.5, E = 0.11 *->ekfr.kiFkeilppeEkLiadckaeVysCplqrpfskipvqGrlYlt +++k+ + l+p+E++ ++ ++ ++ s+ + G+ ++t Rabbit4Lib 145 ALIQnKQLR--LLPQEHVYDK-----IN-GVWNLSSDQGNLGTFFIT 183 nnrlcFrSdklgdltkegvyklviPladiervekes<-* n r+ ++ + d++ ++ iP +i++++ + Rabbit4Lib 184 NVRIVWHA-NMNDSF-----NVSIPYLQIRSIKIRD 213 DUF1448: domain 1 of 1, from 6 to 335: score 839.3, E = 1.3e-248 *->tLWeDRevRFDlslqqlnlrtaRGEilldklshVEDTKGNnGDeGrL +LWeDR+vRFD+s qq+++r+ GE+l+d+l+++EDTKGNnGD+GrL Rabbit4Lib 6 ALWEDRDVRFDVSSQQMKTRP--GEVLIDCLDSIEDTKGNNGDRGRL 50 lVTNLRimWHSlalpRvNLSvGYngItNittRevtsLvnsklRGstEALY lVTNLRi+WHSlalpRvNLS+GYn+I+NittR +nsklRG+tEALY Rabbit4Lib 51 LVTNLRIIWHSLALPRVNLSIGYNCILNITTRI----ANSKLRGQTEALY 96 IlakvscnstRFEFiFTnlspessskDqPlFasVmsVwRAYetTklYReL Il+k cnstRFEFiFTnl+p+s++ lF+sV +V+RAYet+k+YR++ Rabbit4Lib 97 ILTK--CNSTRFEFIFTNLVPGSPR----LFTSVIAVHRAYETSKMYRDF 140 KLRsalvredGqLklLPqEevftrvnGVwNLSsdqGnLGtFfvTNiRvVW KLRsal++ ++qL+lLPqE+v++++nGVwNLSsdqGnLGtFf+TN+R+VW Rabbit4Lib 141 KLRSALIQ-NKQLRLLPQEHVYDKINGVWNLSSDQGNLGTFFITNVRIVW 189 fAdmNesFNiSvPYLQIeslRvRdSKFGlALViETtessGgYVLGFRVDP +A+mN+sFN+S+PYLQI+s+++RdSKFGlALViE++++sGgYVLGF++DP Rabbit4Lib 190 HANMNDSFNVSIPYLQIRSIKIRDSKFGLALVIESSQQSGGYVLGFKIDP 239 vERLqeLfKEiqSLhkaysahPifGVaYtleiiekdaprrnddeieaklq vE+L+e++KEi+SLhk+ysa+PifGV+Y++e ++p+ +++ +++++q Rabbit4Lib 240 VEKLRESVKEINSLHKVYSASPIFGVDYEME----EKPQSLEALTVEQIQ 285 aeegksdnFelldpqhRkLDdeeIdtkveTDAFaAYfadvgqkgddrsaq Dd+eId + +TDAF+AYfad+++++d++ Rabbit4Lib 286 -------------------DDVEIDPDDHTDAFVAYFADGNKQQDRE--- 313 kPVynaELGLAiEplrnGfTLqdLWnVv<-* PV+++ELGLAiE+l++GfTLq+ Rabbit4Lib 314 -PVFSEELGLAIEKLKDGFTLQG----- 335 // Query: Rabbit4Lib.99.C1 766 1 743 nseq=2; minus strand; translated Scores for sequence family classification (score includes all domains): Model Description Score E-value N -------- ----------- ----- ------- --- Ribosomal_L30_N Ribosomal L30 N-terminal domain 126.4 5.4e-34 1 Ribosomal_L30 Ribosomal protein L30p/L7e 100.2 4e-26 1 Parsed for domains: Model Domain seq-f seq-t hmm-f hmm-t score E-value -------- ------- ----- ----- ----- ----- ----- ------- Ribosomal_L30_N 1/1 16 86 .. 1 71 [] 126.4 5.4e-34 Ribosomal_L30 1/1 87 139 .. 1 55 [] 100.2 4e-26 Alignments of top-scoring domains: Ribosomal_L30_N: domain 1 of 1, from 16 to 86: score 126.4, E = 5.4e-34 *->slLKKrKrneelrakrakaaaakKaarkekRklIfkRAEkYvkEYrk +l KKr++++el+ kr+++++a+K+ rk +RklI+++A++Y+kEYr+ Rabbit4Lib 16 TLKKKRRNFAELKIKRLRKKFAQKMLRKARRKLIYEKAKHYHKEYRQ 62 aEReeIRLkReAkkkGnFYVPAEp<-* ++R eIR++R+A+k+GnFYVPAEp Rabbit4Lib 63 MYRTEIRMARMARKAGNFYVPAEP 86 Ribosomal_L30: domain 1 of 1, from 87 to 139: score 100.2, E = 4e-26 *->kllfvvRvRGPvvvgippkirktLrlLRLrriNhgVfvkltkavrgM kl+fv+R+RG ++g+ pk+rk+L+lLRLr+i +g+fvkl+ka ++M Rabbit4Lib 87 KLAFVIRIRG--INGVSPKVRKVLQLLRLRQIFNGTFVKLNKASINM 131 lklVepYV<-* l++VepY+ Rabbit4Lib 132 LRIVEPYI 139 // Query: Rabbit4Lib.99.C2 404 1 438 nseq=2; minus strand; translated Scores for sequence family classification (score includes all domains): Model Description Score E-value N -------- ----------- ----- ------- --- [no hits above thresholds] Parsed for domains: Model Domain seq-f seq-t hmm-f hmm-t score E-value -------- ------- ----- ----- ----- ----- ----- ------- [no hits above thresholds] Alignments of top-scoring domains: [no hits above thresholds] // Query: Rabbit4Lib.99.C3 764 1 781 nseq=39; minus strand; translated Scores for sequence family classification (score includes all domains): Model Description Score E-value N -------- ----------- ----- ------- --- Ribosomal_L30_N Ribosomal L30 N-terminal domain 126.4 5.4e-34 1 Ribosomal_L30 Ribosomal protein L30p/L7e 100.2 4e-26 1 Parsed for domains: Model Domain seq-f seq-t hmm-f hmm-t score E-value -------- ------- ----- ----- ----- ----- ----- ------- Ribosomal_L30_N 1/1 29 99 .. 1 71 [] 126.4 5.4e-34 Ribosomal_L30 1/1 100 152 .. 1 55 [] 100.2 4e-26 Alignments of top-scoring domains: Ribosomal_L30_N: domain 1 of 1, from 29 to 99: score 126.4, E = 5.4e-34 *->slLKKrKrneelrakrakaaaakKaarkekRklIfkRAEkYvkEYrk +l KKr++++el+ kr+++++a+K+ rk +RklI+++A++Y+kEYr+ Rabbit4Lib 29 TLKKKRRNFAELKIKRLRKKFAQKMLRKARRKLIYEKAKHYHKEYRQ 75 aEReeIRLkReAkkkGnFYVPAEp<-* ++R eIR++R+A+k+GnFYVPAEp Rabbit4Lib 76 MYRTEIRMARMARKAGNFYVPAEP 99 Ribosomal_L30: domain 1 of 1, from 100 to 152: score 100.2, E = 4e-26 *->kllfvvRvRGPvvvgippkirktLrlLRLrriNhgVfvkltkavrgM kl+fv+R+RG ++g+ pk+rk+L+lLRLr+i +g+fvkl+ka ++M Rabbit4Lib 100 KLAFVIRIRG--INGVSPKVRKVLQLLRLRQIFNGTFVKLNKASINM 144 lklVepYV<-* l++VepY+ Rabbit4Lib 145 LRIVEPYI 152 // Query: Rabbit4Lib.101.C1 282 1 355 nseq=2; minus strand; translated Scores for sequence family classification (score includes all domains): Model Description Score E-value N -------- ----------- ----- ------- --- Arf ADP-ribosylation factor family 157.2 2.8e-43 1 Parsed for domains: Model Domain seq-f seq-t hmm-f hmm-t score E-value -------- ------- ----- ----- ----- ----- ----- ------- Arf 1/1 3 115 .. 1 186 [] 157.2 2.8e-43 Alignments of top-scoring domains: Arf: domain 1 of 1, from 3 to 115: score 157.2, E = 2.8e-43 *->gflkiflkllglwnKEmRILiLGLDnAGKTTILykLklgevvttiPT + Rabbit4Lib 3 --------TRP------------------------------------ 5 iGFNvEtveyknvkFtvWDvGGQeslRPlWrnYfpnTdavIfVVDSaDrd vGGQ+++RPlWr+Y+ T+++IfVVD+aDrd Rabbit4Lib 6 -------------------VGGQDKIRPLWRHYYTGTQGLIFVVDCADRD 36 RieeakeELhaLLneeeLadaplLilANKQDlpgAlseaEireaLgLhel Ri+ea++ELh+++n++e++da++Li+ANKQDlp+A++++Ei+e+LgL+++ Rabbit4Lib 37 RIDEARQELHRIINDREMRDAIILIFANKQDLPDAMKPHEIQEKLGLTRI 86 kgskgkVtlegdRpWeiqgcsAvkGeGLyEGldWLsnni<-* + + R+W++q+++A++G+GLyEGl WL n Rabbit4Lib 87 R-D---------RNWYVQPSCATSGDGLYEGLTWLTSNY 115 // Query: Rabbit4Lib.103.C1 251 1 228 nseq=2; minus strand; translated Scores for sequence family classification (score includes all domains): Model Description Score E-value N -------- ----------- ----- ------- --- vATP-synt_E ATP synthase (E/31 kDa) subunit -71.0 0.14 1 Parsed for domains: Model Domain seq-f seq-t hmm-f hmm-t score E-value -------- ------- ----- ----- ----- ----- ----- ------- vATP-synt_E 1/1 1 65 [. 1 208 [] -71.0 0.14 Alignments of top-scoring domains: vATP-synt_E: domain 1 of 1, from 1 to 65: score -71.0, E = 0.14 *->fIrqEAeeKAeeIkaeAeeEfeiekaeavqeaekkieeiyekkeKqA Rabbit4Lib - ----------------------------------------------- - EmekkiiiSnakneaRlkvLnaReEvldevfeeakekLanlpedkdeYke + Rabbit4Lib 1 --------------------------------------------P----- 1 llkkLivqalekLgepkviVrsReeDleLveslldkaaeeykektgkdtv +V +k +t+kd v Rabbit4Lib 2 ------------------RV--------------------RKIATKKD-V 12 eligepedfLpkGPksdhGidciGGVvlegadGkIrvdNTLeaRLervfe ++++++e +Lp +d++GGV+++++d+kI+v+NTLe+RL+++++ Rabbit4Lib 13 DVQIDQEAYLP--------EDIAGGVEIYNGDRKIKVSNTLESRLDLIAQ 54 qllpeIrkaLF<-* q++pe+r aLF Rabbit4Lib 55 QMMPEVRGALF 65 // Query: Rabbit4Lib.103.C2 955 114 794 nseq=4; minus strand; translated Scores for sequence family classification (score includes all domains): Model Description Score E-value N -------- ----------- ----- ------- --- vATP-synt_E ATP synthase (E/31 kDa) subunit 359.2 4.4e-104 1 DUF827 Plant protein of unknown function (DUF827 -127.7 4.3 1 Parsed for domains: Model Domain seq-f seq-t hmm-f hmm-t score E-value -------- ------- ----- ----- ----- ----- ----- ------- vATP-synt_E 1/1 18 216 .. 1 208 [] 359.2 4.4e-104 DUF827 1/1 21 219 .. 1 551 [] -127.7 4.3 Alignments of top-scoring domains: vATP-synt_E: domain 1 of 1, from 18 to 216: score 359.2, E = 4.4e-104 *->fIrqEAeeKAeeIkaeAeeEfeiekaeavqeaekkieeiyekkeKqA fI+qEA+eKAeeI+a+AeeEf+iek+++vq +++ki+e+yekkeKq+ Rabbit4Lib 18 FIEQEANEKAEEIDAKAEEEFNIEKGRLVQTQRLKIMEYYEKKEKQI 64 EmekkiiiSnakneaRlkvLnaReEvldevfeeakekLanlpedkdeYke E++kki++Sn +n+aRlkvL+aR++++ + ++eak++L+++ +d+++Y+ Rabbit4Lib 65 EQQKKIQMSNLMNQARLKVLRARDDLITDLLNEAKQRLSKVVKDTTRYQV 114 llkkLivqalekLgepkviVrsReeDleLveslldkaaeeykektgkdtv ll +L++q+l++L ep++iVr+R++D++Lv+++++ka+ +yk +t+kd v Rabbit4Lib 115 LLDGLVLQGLYQLLEPRMIVRCRKQDFPLVKAAVQKAIPMYKIATKKD-V 163 eligepedfLpkGPksdhGidciGGVvlegadGkIrvdNTLeaRLervfe ++++++e +Lp +d++GGV+++++d+kI+v+NTLe+RL+++++ Rabbit4Lib 164 DVQIDQEAYLP--------EDIAGGVEIYNGDRKIKVSNTLESRLDLIAQ 205 qllpeIrkaLF<-* q++pe+r aLF Rabbit4Lib 206 QMMPEVRGALF 216 DUF827: domain 1 of 1, from 21 to 219: score -127.7, E = 4.3 *->sAPFeSVKEAVtlFGgiafWKahyatRLkklqsserrktvsfedVsd +EA + + +++Ka + ++e+ ++v Rabbit4Lib 21 -------QEANEKAEE-IDAKAE------EEFNIEKGRLV------- 46 eetELekvqkeapelKkeLenaEreklqVLkELEsTKrtveeLklkLEka +t+ k+ + ++k+ + E k s +++++ +lk+ +a Rabbit4Lib 47 -QTQRLKIME---YYEKKEKQIEQQKKIQM----S--NLMNQARLKVLRA 86 ekeeqqAkqdsElAklRvEEmEqGiadeASVaaktqlEVAkEryisatsE ++ Rabbit4Lib 87 RDD----------------------------------------------- 89 LdsvKeELekvrqeynslleEKdlAlkrAEEAvlaskvvekkveeLtkEl Rabbit4Lib - -------------------------------------------------- - iAtKeslEsahaaHleAeEerigiamekdqdreayekelkeAeeeLqrLn Rabbit4Lib - -------------------------------------------------- - qeldpELkkDlkakLdeasaeledLkeElaaykeSkikeEaevieeegei Rabbit4Lib - -------------------------------------------------- - aaqesshdimssvasitkELeeAKmnLeKaaeEekslrslveSLkqELee it+ L+eAK++L+K++++ + +++l L L+ Rabbit4Lib 90 --------------LITDLLNEAKQRLSKVVKDTTRYQVLLDGLV--LQG 123 eKaeleelrqREgeasiavaSLeaELsRtksEIelvkskEkearEekmvE + l E Rabbit4Lib 124 LYQLL---------------------------------------E----- 129 lpkklqqasrEAeeaKkeAenareelrkakeEaEqaktalstaEkrLvaA p+++ + ++ ++ + ++++ ++ + k ++ ++ + + Rabbit4Lib 130 -PRMIVRCRKQ--DFPLVKAAVQKAIPMYKIATK------KDVDVQID-- 168 rKeiEaAKaaEklAiaeIKaLqeseesqkndeiesSprsItisleEyeeL ++A +E +I ++ + i +++r+I++s Rabbit4Lib 169 ----QEAYLPE-----DI--------AGGVE-IYNGDRKIKVS------- 193 skraeEaEelvnfrvaealaqvEeakeseseiLeKLEeaekeieekKaal + es+ + a++++ e + al Rabbit4Lib 194 -------------------------NTLESRLDLI---AQQMMPEVRGAL 215 eeAl<-* +A+ Rabbit4Lib 216 FGAN 219 // Query: Rabbit4Lib.104.C1 1317 1 667 nseq=2; minus strand; translated Scores for sequence family classification (score includes all domains): Model Description Score E-value N -------- ----------- ----- ------- --- SAC3_GANP SAC3/GANP/Nin1/mts3/eIF-3 p25 family 122.3 8.9e-33 1 Parsed for domains: Model Domain seq-f seq-t hmm-f hmm-t score E-value -------- ------- ----- ----- ----- ----- ----- ------- SAC3_GANP 1/1 23 168 .. 1 249 [] 122.3 8.9e-33 Alignments of top-scoring domains: SAC3_GANP: domain 1 of 1, from 23 to 168: score 122.3, E = 8.9e-33 *->erpnPeeLrplkvLlktldyLvdkildqaeyeaeraWYsfvddrlrs r+nPe+L++l+ +v ++++ Rabbit4Lib 23 DRYNPENLATLE--------------------------RYVETQAKE 43 irqDltvqgvedsitvkdyEsferyHilslarlalEegdeqFDlqqelee +++Dl++ Rabbit4Lib 44 NAYDLEA------------------------------------------- 50 lnkClgllqLkelYqdlkkkleecpneaefrigynlLyklLaslndpdfh +l++++lYq+ +p +++++ ++L+k+L++l+++df+ Rabbit4Lib 51 ------NLAVLKLYQF-------NPAFFQTTVTAQILLKALTNLPHTDFT 87 telellDdppkevredpyvktalqLeaalmegnnTEacNLYnkffrllqk ++++++ +++++e+ +++ +l+L+++l++ + Rabbit4Lib 88 LCKCMI---DQAHQEERPIRQILYLGDLLETVI-------------SRPS 121 nnqppylcdysclmdd.ifldtiRkealrvisksYnsrhqkiplkylael + + ++ ++ l +++f+d++Rk++++v++++Y q+i +++lae+ Rabbit4Lib 122 GKXLDEN--MDLLEGItGFEDSVRKFICHVVGITY----QHIDRWLLAEM 165 Lgf<-* Lg Rabbit4Lib 166 LGD 168 // Query: Rabbit4Lib.105.C1 987 70 757 nseq=2; minus strand; translated Scores for sequence family classification (score includes all domains): Model Description Score E-value N -------- ----------- ----- ------- --- ESCRT-III ESCRT-III complex subunit 281.3 1.3e-80 1 KE2 KE2 family protein -5.4 1.3 1 NPV_P10 Nucleopolyhedrovirus P10 protein -6.7 2.9 1 Parsed for domains: Model Domain seq-f seq-t hmm-f hmm-t score E-value -------- ------- ----- ----- ----- ----- ----- ------- KE2 1/1 60 156 .. 1 106 [] -5.4 1.3 NPV_P10 1/1 89 160 .. 1 89 [] -6.7 2.9 ESCRT-III 1/1 12 197 .. 1 196 [] 281.3 1.3e-80 Alignments of top-scoring domains: KE2: domain 1 of 1, from 60 to 156: score -5.4, E = 1.3 *->QelinkfqqLqqqleklaeqikqletqlkEielvleELelldedtkv ++ k + +q++++++q+++l +q + e + ++++l ++ Rabbit4Lib 60 MVKQ-KALRVLKQKRMYEQQRDNLAQQSFNMEQANYTIQSLKDT--- 102 YklvGgvLVkqdkeevkeeLeerketleke....iktLekqleklekele k++++ k ++e+k+ +++++ ++i+ L++qle++ ++++ Rabbit4Lib 103 ---------KTTVDAMKLGVKEMKKAYKQVkidqIEDLQDQLEDMMEDAS 143 elkeelqkllgsa<-* e +e l +g Rabbit4Lib 144 EIQEALSRSYGTP 156 NPV_P10: domain 1 of 1, from 89 to 160: score -6.7, E = 2.9 *->MSKQNILlqIrdDIkavddKVdaLQqqVddlranlpDvteLndkLDa M + N q + D +++ Vda V+ ++ + v d++++ Rabbit4Lib 89 MEQANYTIQSLKD---TKTTVDAMKLGVKEMKKAYKQV--KIDQIED 130 qtAqLtdlqtkVdeIqdiLngdevePEPeaeapeppvPeiPd<-* + +qL+d + +eIq+ L+ Pe+ + Rabbit4Lib 131 LQDQLEDMMEDASEIQEALS------------RSYGTPELDE 160 ESCRT-III: domain 1 of 1, from 12 to 197: score 281.3, E = 1.3e-80 *->eailsLrkairkLdkkqeslEkkikklelelkkaakkgnKmReGPak ++++sL+++i +d + es++kki++l++el k++ ++ KmReGPak Rabbit4Lib 12 APPPSLTDCIGTVDSRAESIDKKISRLDAELVKYKDQIKKMREGPAK 58 .alKdaAlilLKqkkryEkqldqldgqlsnleqvamaienaktnkevlna +++K++Al++LKqk++yE+q+d+l +q++n+eq++++i+++k++k++++a Rabbit4Lib 59 nMVKQKALRVLKQKRMYEQQRDNLAQQSFNMEQANYTIQSLKDTKTTVDA 108 MkggakaMKamnknmdidkiddlMDeiedqmekadeisEalsdpmddald Mk g+k MK+++k+++id+i+dl+D++ed+me+a ei+Eals+++++ Rabbit4Lib 109 MKLGVKEMKKAYKQVKIDQIEDLQDQLEDMMEDASEIQEALSRSYGT--- 155 deeDEdEldaELdaLedEigieellsal.pelsaepyllsveLPsvPsee +e DEd+l+aELdaL+dE++++e++s+l++ ++ +P+vP++ Rabbit4Lib 156 PELDEDDLEAELDALGDELLADEDSSYLdE---------AASAPAVPEGV 196 l<-* + Rabbit4Lib 197 P 197 // Query: Rabbit4Lib.106.C1 341 1 505 nseq=2; minus strand; translated Scores for sequence family classification (score includes all domains): Model Description Score E-value N -------- ----------- ----- ------- --- PCNA_C Proliferating cell nuclear antigen, C-termin 334.2 1.5e-96 1 Parsed for domains: Model Domain seq-f seq-t hmm-f hmm-t score E-value -------- ------- ----- ----- ----- ----- ----- ------- PCNA_C 1/1 12 139 .. 1 128 [] 334.2 1.5e-96 Alignments of top-scoring domains: PCNA_C: domain 1 of 1, from 12 to 139: score 334.2, E = 1.5e-96 *->GIPeseYdcvvrMPSaEFarIcrDLsqlsDsVvIsctKeGVkFsAsG GIPe+eY+cvv+MPS+EFarIcrDLs+++D+VvIsc+K+GVkFsAsG Rabbit4Lib 12 GIPEQEYSCVVKMPSGEFARICRDLSHIGDAVVISCAKDGVKFSASG 58 DIGtgnivlkqttdvdkpEeaiiiemqqpVtLTFAlrYLnsFtKAtPLst ++G+gni+l+qt++vdk+Eea++iem++pV+LTFAlrYLn+FtKAtPLs+ Rabbit4Lib 59 ELGNGNIKLSQTSNVDKEEEAVTIEMNEPVQLTFALRYLNFFTKATPLSP 108 rVtismSsevPlvvEYkikdmgliryyLApk<-* +Vt+smS++vPlvvEYki+dmg+++yyLApk Rabbit4Lib 109 TVTLSMSADVPLVVEYKIADMGHLKYYLAPK 139 // Query: Rabbit4Lib.107.C1 512 1 442 nseq=8; minus strand; translated Scores for sequence family classification (score includes all domains): Model Description Score E-value N -------- ----------- ----- ------- --- [no hits above thresholds] Parsed for domains: Model Domain seq-f seq-t hmm-f hmm-t score E-value -------- ------- ----- ----- ----- ----- ----- ------- [no hits above thresholds] Alignments of top-scoring domains: [no hits above thresholds] // Query: Rabbit4Lib.107.C2 627 36 524 nseq=2; minus strand; translated Scores for sequence family classification (score includes all domains): Model Description Score E-value N -------- ----------- ----- ------- --- [no hits above thresholds] Parsed for domains: Model Domain seq-f seq-t hmm-f hmm-t score E-value -------- ------- ----- ----- ----- ----- ----- ------- [no hits above thresholds] Alignments of top-scoring domains: [no hits above thresholds] // Query: Rabbit4Lib.109.C1 261 1 389 nseq=2; minus strand; translated Scores for sequence family classification (score includes all domains): Model Description Score E-value N -------- ----------- ----- ------- --- [no hits above thresholds] Parsed for domains: Model Domain seq-f seq-t hmm-f hmm-t score E-value -------- ------- ----- ----- ----- ----- ----- ------- [no hits above thresholds] Alignments of top-scoring domains: [no hits above thresholds] // Query: Rabbit4Lib.113.C1 421 1 273 nseq=3; minus strand; translated Scores for sequence family classification (score includes all domains): Model Description Score E-value N -------- ----------- ----- ------- --- Ribosomal_S21e Ribosomal protein S21e 212.3 7.4e-60 1 Parsed for domains: Model Domain seq-f seq-t hmm-f hmm-t score E-value -------- ------- ----- ----- ----- ----- ----- ------- Ribosomal_S21e 1/1 9 89 .. 1 83 [] 212.3 7.4e-60 Alignments of top-scoring domains: Ribosomal_S21e: domain 1 of 1, from 9 to 89: score 212.3, E = 7.4e-60 *->MqNdaGqlVdLYVPRKCSAtNRIIgAKDHASVQINvaeVDkeeGRli qNdaG++VdLYVPRKCSA+NRIIgAKDHAS+Q+Nv eVDk++GR++ Rabbit4Lib 9 -QNDAGEFVDLYVPRKCSASNRIIGAKDHASIQMNVTEVDKVTGRFN 54 pGeftTYAisGfvRrmGESDDsilRLaqkDGlvkkv<-* G+f+TYAi+G++RrmGESDDsilRLa+ DG+v+++ Rabbit4Lib 55 -GQFKTYAICGAIRRMGESDDSILRLAKSDGIVSQN 89 // Query: Rabbit4Lib.113.C2 437 1 285 nseq=2; minus strand; translated Scores for sequence family classification (score includes all domains): Model Description Score E-value N -------- ----------- ----- ------- --- Ribosomal_S21e Ribosomal protein S21e 222.0 8.6e-63 1 Parsed for domains: Model Domain seq-f seq-t hmm-f hmm-t score E-value -------- ------- ----- ----- ----- ----- ----- ------- Ribosomal_S21e 1/1 12 93 .. 1 83 [] 222.0 8.6e-63 Alignments of top-scoring domains: Ribosomal_S21e: domain 1 of 1, from 12 to 93: score 222.0, E = 8.6e-63 *->MqNdaGqlVdLYVPRKCSAtNRIIgAKDHASVQINvaeVDkeeGRli MqNdaG++VdLYVPRKCSA+NRIIgAKDHAS+Q+NvaeVDk++GR++ Rabbit4Lib 12 MQNDAGEFVDLYVPRKCSASNRIIGAKDHASIQMNVAEVDKVTGRFN 58 pGeftTYAisGfvRrmGESDDsilRLaqkDGlvkkv<-* G+f+TYAi+G++RrmGESDDsilRLa+ DG+v+++ Rabbit4Lib 59 -GQFKTYAICGAIRRMGESDDSILRLAKSDGIVSQN 93 // Query: Rabbit4Lib.113.C3 473 1 314 nseq=3; minus strand; translated Scores for sequence family classification (score includes all domains): Model Description Score E-value N -------- ----------- ----- ------- --- Ribosomal_S21e Ribosomal protein S21e 222.0 8.6e-63 1 Parsed for domains: Model Domain seq-f seq-t hmm-f hmm-t score E-value -------- ------- ----- ----- ----- ----- ----- ------- Ribosomal_S21e 1/1 22 103 .. 1 83 [] 222.0 8.6e-63 Alignments of top-scoring domains: Ribosomal_S21e: domain 1 of 1, from 22 to 103: score 222.0, E = 8.6e-63 *->MqNdaGqlVdLYVPRKCSAtNRIIgAKDHASVQINvaeVDkeeGRli MqNdaG++VdLYVPRKCSA+NRIIgAKDHAS+Q+NvaeVDk++GR++ Rabbit4Lib 22 MQNDAGEFVDLYVPRKCSASNRIIGAKDHASIQMNVAEVDKVTGRFN 68 pGeftTYAisGfvRrmGESDDsilRLaqkDGlvkkv<-* G+f+TYAi+G++RrmGESDDsilRLa+ DG+v+++ Rabbit4Lib 69 -GQFKTYAICGAIRRMGESDDSILRLAKSDGIVSQN 103 // Query: Rabbit4Lib.113.C4 508 44 310 nseq=3; minus strand; translated Scores for sequence family classification (score includes all domains): Model Description Score E-value N -------- ----------- ----- ------- --- Ribosomal_S21e Ribosomal protein S21e 222.0 8.6e-63 1 Parsed for domains: Model Domain seq-f seq-t hmm-f hmm-t score E-value -------- ------- ----- ----- ----- ----- ----- ------- Ribosomal_S21e 1/1 6 87 .. 1 83 [] 222.0 8.6e-63 Alignments of top-scoring domains: Ribosomal_S21e: domain 1 of 1, from 6 to 87: score 222.0, E = 8.6e-63 *->MqNdaGqlVdLYVPRKCSAtNRIIgAKDHASVQINvaeVDkeeGRli MqNdaG++VdLYVPRKCSA+NRIIgAKDHAS+Q+NvaeVDk++GR++ Rabbit4Lib 6 MQNDAGEFVDLYVPRKCSASNRIIGAKDHASIQMNVAEVDKVTGRFN 52 pGeftTYAisGfvRrmGESDDsilRLaqkDGlvkkv<-* G+f+TYAi+G++RrmGESDDsilRLa+ DG+v+++ Rabbit4Lib 53 -GQFKTYAICGAIRRMGESDDSILRLAKSDGIVSQN 87 // Query: Rabbit4Lib.113.C5 466 1 287 nseq=2; minus strand; translated Scores for sequence family classification (score includes all domains): Model Description Score E-value N -------- ----------- ----- ------- --- Ribosomal_S21e Ribosomal protein S21e 222.0 8.6e-63 1 Parsed for domains: Model Domain seq-f seq-t hmm-f hmm-t score E-value -------- ------- ----- ----- ----- ----- ----- ------- Ribosomal_S21e 1/1 13 94 .. 1 83 [] 222.0 8.6e-63 Alignments of top-scoring domains: Ribosomal_S21e: domain 1 of 1, from 13 to 94: score 222.0, E = 8.6e-63 *->MqNdaGqlVdLYVPRKCSAtNRIIgAKDHASVQINvaeVDkeeGRli MqNdaG++VdLYVPRKCSA+NRIIgAKDHAS+Q+NvaeVDk++GR++ Rabbit4Lib 13 MQNDAGEFVDLYVPRKCSASNRIIGAKDHASIQMNVAEVDKVTGRFN 59 pGeftTYAisGfvRrmGESDDsilRLaqkDGlvkkv<-* G+f+TYAi+G++RrmGESDDsilRLa+ DG+v+++ Rabbit4Lib 60 -GQFKTYAICGAIRRMGESDDSILRLAKSDGIVSQN 94 // Query: Rabbit4Lib.113.C6 416 1 261 nseq=7; minus strand; translated Scores for sequence family classification (score includes all domains): Model Description Score E-value N -------- ----------- ----- ------- --- Ribosomal_S21e Ribosomal protein S21e 214.5 1.6e-60 1 Parsed for domains: Model Domain seq-f seq-t hmm-f hmm-t score E-value -------- ------- ----- ----- ----- ----- ----- ------- Ribosomal_S21e 1/1 5 85 .. 1 83 [] 214.5 1.6e-60 Alignments of top-scoring domains: Ribosomal_S21e: domain 1 of 1, from 5 to 85: score 214.5, E = 1.6e-60 *->MqNdaGqlVdLYVPRKCSAtNRIIgAKDHASVQINvaeVDkeeGRli qNdaG++VdLYVPRKCSA+NRIIgAKDHAS+Q+NvaeVDk++GR++ Rabbit4Lib 5 -QNDAGEFVDLYVPRKCSASNRIIGAKDHASIQMNVAEVDKVTGRFN 50 pGeftTYAisGfvRrmGESDDsilRLaqkDGlvkkv<-* G+f+TYAi+G++RrmGESDDsilRLa+ DG+v+++ Rabbit4Lib 51 -GQFKTYAICGAIRRMGESDDSILRLAKSDGIVSQN 85 // Query: Rabbit4Lib.116.C1 278 1 292 nseq=3; minus strand; translated Scores for sequence family classification (score includes all domains): Model Description Score E-value N -------- ----------- ----- ------- --- COX7a Cytochrome c oxidase subunit VIIa 202.6 6.1e-57 1 Parsed for domains: Model Domain seq-f seq-t hmm-f hmm-t score E-value -------- ------- ----- ----- ----- ----- ----- ------- COX7a 1/1 19 94 .. 1 76 [] 202.6 6.1e-57 Alignments of top-scoring domains: COX7a: domain 1 of 1, from 19 to 94: score 202.6, E = 6.1e-57 *->iLavsqillrsiStasrrhfkNkVpEkQKLFQeddgiPvyLKGGipD +La++qi++r+iStasrrhf+NkVpEkQKLFQed+giPv+LKGG++D Rabbit4Lib 19 LLALRQIAQRTISTASRRHFENKVPEKQKLFQEDNGIPVHLKGGVAD 65 alLYRaTMtLTlGGTaYcLyaLamASfPk<-* alLYRaTM+LT+GGTaY++y+LamASfPk Rabbit4Lib 66 ALLYRATMILTVGGTAYAIYQLAMASFPK 94 // Query: Rabbit4Lib.116.C2 310 1 285 nseq=4; minus strand; translated Scores for sequence family classification (score includes all domains): Model Description Score E-value N -------- ----------- ----- ------- --- COX7a Cytochrome c oxidase subunit VIIa 202.6 6.1e-57 1 Parsed for domains: Model Domain seq-f seq-t hmm-f hmm-t score E-value -------- ------- ----- ----- ----- ----- ----- ------- COX7a 1/1 16 91 .. 1 76 [] 202.6 6.1e-57 Alignments of top-scoring domains: COX7a: domain 1 of 1, from 16 to 91: score 202.6, E = 6.1e-57 *->iLavsqillrsiStasrrhfkNkVpEkQKLFQeddgiPvyLKGGipD +La++qi++r+iStasrrhf+NkVpEkQKLFQed+giPv+LKGG++D Rabbit4Lib 16 LLALRQIAQRTISTASRRHFENKVPEKQKLFQEDNGIPVHLKGGVAD 62 alLYRaTMtLTlGGTaYcLyaLamASfPk<-* alLYRaTM+LT+GGTaY++y+LamASfPk Rabbit4Lib 63 ALLYRATMILTVGGTAYAIYQLAMASFPK 91 // Query: Rabbit4Lib.116.C3 251 1 326 nseq=5; minus strand; translated Scores for sequence family classification (score includes all domains): Model Description Score E-value N -------- ----------- ----- ------- --- COX7a Cytochrome c oxidase subunit VIIa 200.3 3e-56 1 Parsed for domains: Model Domain seq-f seq-t hmm-f hmm-t score E-value -------- ------- ----- ----- ----- ----- ----- ------- COX7a 1/1 30 105 .. 1 76 [] 200.3 3e-56 Alignments of top-scoring domains: COX7a: domain 1 of 1, from 30 to 105: score 200.3, E = 3e-56 *->iLavsqillrsiStasrrhfkNkVpEkQKLFQeddgiPvyLKGGipD +La +qi++r+iStasrrhf+NkVpEkQKLFQed+giPv+LKGG++D Rabbit4Lib 30 LLAFRQIAQRTISTASRRHFENKVPEKQKLFQEDNGIPVHLKGGVAD 76 alLYRaTMtLTlGGTaYcLyaLamASfPk<-* alLYRaTM+LT+GGTaY++y+LamASfPk Rabbit4Lib 77 ALLYRATMILTVGGTAYAIYQLAMASFPK 105 // Query: Rabbit4Lib.117.C1 87 1 141 nseq=4; minus strand; translated Scores for sequence family classification (score includes all domains): Model Description Score E-value N -------- ----------- ----- ------- --- [no hits above thresholds] Parsed for domains: Model Domain seq-f seq-t hmm-f hmm-t score E-value -------- ------- ----- ----- ----- ----- ----- ------- [no hits above thresholds] Alignments of top-scoring domains: [no hits above thresholds] // Query: Rabbit4Lib.120.C1 318 62 385 nseq=2; minus strand; translated Scores for sequence family classification (score includes all domains): Model Description Score E-value N -------- ----------- ----- ------- --- Ribosomal_L7Ae Ribosomal protein L7Ae/L30e/S12e/Gadd4 116.9 3.9e-31 1 Parsed for domains: Model Domain seq-f seq-t hmm-f hmm-t score E-value -------- ------- ----- ----- ----- ----- ----- ------- Ribosomal_L7Ae 1/1 4 98 .. 1 100 [] 116.9 3.9e-31 Alignments of top-scoring domains: Ribosomal_L7Ae: domain 1 of 1, from 4 to 98: score 116.9, E = 3.9e-31 *->daveellkkAlkagklvlGlkevtKalrrgeakLviiAedvdpeekk +++++ l++ +k+gk+vlG+k+++K +r+g+akLvi+A++++ ++k Rabbit4Lib 4 ESINSRLQLVMKSGKYVLGYKQSLKMIRQGKAKLVILANNCPALRKS 50 kdTLipalcklseknVPyvrvpskaeLGeligkprgdvsvlaivdagdsk + i+++++l++ +V+++ +++ eLG+++gk ++ v++l i d+gds Rabbit4Lib 51 E---IEYYAMLAKTGVHHYSGNN-IELGTACGKYYR-VCTLSIIDPGDSD 95 dlv<-* + Rabbit4Lib 96 IIR 98 // Query: Rabbit4Lib.120.C2 318 93 416 nseq=3; minus strand; translated Scores for sequence family classification (score includes all domains): Model Description Score E-value N -------- ----------- ----- ------- --- Ribosomal_L7Ae Ribosomal protein L7Ae/L30e/S12e/Gadd4 116.9 3.9e-31 1 Parsed for domains: Model Domain seq-f seq-t hmm-f hmm-t score E-value -------- ------- ----- ----- ----- ----- ----- ------- Ribosomal_L7Ae 1/1 4 98 .. 1 100 [] 116.9 3.9e-31 Alignments of top-scoring domains: Ribosomal_L7Ae: domain 1 of 1, from 4 to 98: score 116.9, E = 3.9e-31 *->daveellkkAlkagklvlGlkevtKalrrgeakLviiAedvdpeekk +++++ l++ +k+gk+vlG+k+++K +r+g+akLvi+A++++ ++k Rabbit4Lib 4 ESINSRLQLVMKSGKYVLGYKQSLKMIRQGKAKLVILANNCPALRKS 50 kdTLipalcklseknVPyvrvpskaeLGeligkprgdvsvlaivdagdsk + i+++++l++ +V+++ +++ eLG+++gk ++ v++l i d+gds Rabbit4Lib 51 E---IEYYAMLAKTGVHHYSGNN-IELGTACGKYYR-VCTLSIIDPGDSD 95 dlv<-* + Rabbit4Lib 96 IIR 98 // Query: Rabbit4Lib.120.C3 239 1 412 nseq=3; minus strand; translated Scores for sequence family classification (score includes all domains): Model Description Score E-value N -------- ----------- ----- ------- --- Ribosomal_L7Ae Ribosomal protein L7Ae/L30e/S12e/Gadd4 113.1 5.3e-30 1 Parsed for domains: Model Domain seq-f seq-t hmm-f hmm-t score E-value -------- ------- ----- ----- ----- ----- ----- ------- Ribosomal_L7Ae 1/1 33 127 .. 1 100 [] 113.1 5.3e-30 Alignments of top-scoring domains: Ribosomal_L7Ae: domain 1 of 1, from 33 to 127: score 113.1, E = 5.3e-30 *->daveellkkAlkagklvlGlkevtKalrrgeakLviiAedvdpeekk +++ l++ +k+gk+vlG+k+++K +r+g+akLvi+A++++ ++k Rabbit4Lib 33 GVINSRLQLVMKSGKYVLGYKQSLKMIRQGKAKLVILANNCPALRKS 79 kdTLipalcklseknVPyvrvpskaeLGeligkprgdvsvlaivdagdsk + i+++++l++ +V+++ +++ eLG+++gk ++ v++l i d+gds Rabbit4Lib 80 E---IEYYAMLAKTGVHHYSGNN-IELGTACGKYYR-VCTLSIIDPGDSD 124 dlv<-* + Rabbit4Lib 125 IIR 127 // Query: Rabbit4Lib.120.C4 238 1 408 nseq=4; minus strand; translated Scores for sequence family classification (score includes all domains): Model Description Score E-value N -------- ----------- ----- ------- --- Ribosomal_L7Ae Ribosomal protein L7Ae/L30e/S12e/Gadd4 113.1 5.3e-30 1 Parsed for domains: Model Domain seq-f seq-t hmm-f hmm-t score E-value -------- ------- ----- ----- ----- ----- ----- ------- Ribosomal_L7Ae 1/1 32 126 .. 1 100 [] 113.1 5.3e-30 Alignments of top-scoring domains: Ribosomal_L7Ae: domain 1 of 1, from 32 to 126: score 113.1, E = 5.3e-30 *->daveellkkAlkagklvlGlkevtKalrrgeakLviiAedvdpeekk +++ l++ +k+gk+vlG+k+++K +r+g+akLvi+A++++ ++k Rabbit4Lib 32 GVINSRLQLVMKSGKYVLGYKQSLKMIRQGKAKLVILANNCPALRKS 78 kdTLipalcklseknVPyvrvpskaeLGeligkprgdvsvlaivdagdsk + i+++++l++ +V+++ +++ eLG+++gk ++ v++l i d+gds Rabbit4Lib 79 E---IEYYAMLAKTGVHHYSGNN-IELGTACGKYYR-VCTLSIIDPGDSD 123 dlv<-* + Rabbit4Lib 124 IIR 126 // Query: Rabbit4Lib.120.C5 318 23 346 nseq=4; minus strand; translated Scores for sequence family classification (score includes all domains): Model Description Score E-value N -------- ----------- ----- ------- --- Ribosomal_L7Ae Ribosomal protein L7Ae/L30e/S12e/Gadd4 116.9 3.9e-31 1 Parsed for domains: Model Domain seq-f seq-t hmm-f hmm-t score E-value -------- ------- ----- ----- ----- ----- ----- ------- Ribosomal_L7Ae 1/1 4 98 .. 1 100 [] 116.9 3.9e-31 Alignments of top-scoring domains: Ribosomal_L7Ae: domain 1 of 1, from 4 to 98: score 116.9, E = 3.9e-31 *->daveellkkAlkagklvlGlkevtKalrrgeakLviiAedvdpeekk +++++ l++ +k+gk+vlG+k+++K +r+g+akLvi+A++++ ++k Rabbit4Lib 4 ESINSRLQLVMKSGKYVLGYKQSLKMIRQGKAKLVILANNCPALRKS 50 kdTLipalcklseknVPyvrvpskaeLGeligkprgdvsvlaivdagdsk + i+++++l++ +V+++ +++ eLG+++gk ++ v++l i d+gds Rabbit4Lib 51 E---IEYYAMLAKTGVHHYSGNN-IELGTACGKYYR-VCTLSIIDPGDSD 95 dlv<-* + Rabbit4Lib 96 IIR 98 // Query: Rabbit4Lib.121.C1 181 1 135 nseq=3; translated Scores for sequence family classification (score includes all domains): Model Description Score E-value N -------- ----------- ----- ------- --- [no hits above thresholds] Parsed for domains: Model Domain seq-f seq-t hmm-f hmm-t score E-value -------- ------- ----- ----- ----- ----- ----- ------- [no hits above thresholds] Alignments of top-scoring domains: [no hits above thresholds] // Query: Rabbit4Lib.122.C1 101 1 92 nseq=2; minus strand; translated Scores for sequence family classification (score includes all domains): Model Description Score E-value N -------- ----------- ----- ------- --- [no hits above thresholds] Parsed for domains: Model Domain seq-f seq-t hmm-f hmm-t score E-value -------- ------- ----- ----- ----- ----- ----- ------- [no hits above thresholds] Alignments of top-scoring domains: [no hits above thresholds] // Query: Rabbit4Lib.123.C1 496 1 667 nseq=2; minus strand; translated Scores for sequence family classification (score includes all domains): Model Description Score E-value N -------- ----------- ----- ------- --- Cache_1 Cache domain 139.5 6.1e-38 1 Parsed for domains: Model Domain seq-f seq-t hmm-f hmm-t score E-value -------- ------- ----- ----- ----- ----- ----- ------- Cache_1 1/1 88 179 .. 1 92 [] 139.5 6.1e-38 Alignments of top-scoring domains: Cache_1: domain 1 of 1, from 88 to 179: score 139.5, E = 6.1e-38 *->wTePYvdaa...s.tgdmViTvsvPvydrtneqrnktndngdllGVv wTe+Y+d++ +++++ +++Tv++Pv+ ++ne+r+k g llGVv Rabbit4Lib 88 WTEAYIDSTladDqGLVLMTTVAMPVFSKQNETRSK----GILLGVV 130 giDvpledLlkltksiklGktGYaFivdnnGkvlaHPnlrpvtkllkdw< g+Dvp+++Llk+++++klG +GYaF+++nnG++l+HP lrp ++++k+ Rabbit4Lib 131 GTDVPVKELLKTIPKYKLGIHGYAFAITNNGYILTHPELRPLYEEGKKR 179 -* Rabbit4Lib - - // Query: Rabbit4Lib.124.C1 686 1 653 nseq=2; minus strand; translated Scores for sequence family classification (score includes all domains): Model Description Score E-value N -------- ----------- ----- ------- --- [no hits above thresholds] Parsed for domains: Model Domain seq-f seq-t hmm-f hmm-t score E-value -------- ------- ----- ----- ----- ----- ----- ------- [no hits above thresholds] Alignments of top-scoring domains: [no hits above thresholds] // Query: Rabbit4Lib.127.C1 496 36 453 nseq=21; minus strand; translated Scores for sequence family classification (score includes all domains): Model Description Score E-value N -------- ----------- ----- ------- --- Ribosomal_S8 Ribosomal protein S8 194.4 1.7e-54 1 Parsed for domains: Model Domain seq-f seq-t hmm-f hmm-t score E-value -------- ------- ----- ----- ----- ----- ----- ------- Ribosomal_S8 1/1 5 130 .. 1 144 [] 194.4 1.7e-54 Alignments of top-scoring domains: Ribosomal_S8: domain 1 of 1, from 5 to 130: score 194.4, E = 1.7e-54 *->DtIADmLtrIrNAnkmgkhetvrvpsSKltenCWileILkkeGFIed ++AD+L++I+NA+k+gk++++++p SK++++ +l +++k+G+I++ Rabbit4Lib 5 NVLADALKSINNAEKRGKRQVLIRPCSKVIVR--FLTVMMKHGYIGE 49 FeikLaarlevedgrkgylrveLKYrgnkekkrpyivilglkRISkPGlR Fei ++d+r+g+++v+L +r n +++++++R++++ + Rabbit4Lib 50 FEI-------IDDHRAGKIVVNLTGRLN-------KCGVISPRFDVQLKD 85 iYskykelpkvlgGlGIaILSTSkGimTDreARkkgfvGGElLcyVw<-* +++ ++l+++++ +G+++L+TS Gim+++eAR+k+ GG++L++++ Rabbit4Lib 86 LEKWQNNLLPSRQ-FGFIVLTTSAGIMDHEEARRKH-TGGKILGFFF 130 // Query: Rabbit4Lib.127.C2 496 19 436 nseq=5; minus strand; translated Scores for sequence family classification (score includes all domains): Model Description Score E-value N -------- ----------- ----- ------- --- Ribosomal_S8 Ribosomal protein S8 194.4 1.7e-54 1 Parsed for domains: Model Domain seq-f seq-t hmm-f hmm-t score E-value -------- ------- ----- ----- ----- ----- ----- ------- Ribosomal_S8 1/1 5 130 .. 1 144 [] 194.4 1.7e-54 Alignments of top-scoring domains: Ribosomal_S8: domain 1 of 1, from 5 to 130: score 194.4, E = 1.7e-54 *->DtIADmLtrIrNAnkmgkhetvrvpsSKltenCWileILkkeGFIed ++AD+L++I+NA+k+gk++++++p SK++++ +l +++k+G+I++ Rabbit4Lib 5 NVLADALKSINNAEKRGKRQVLIRPCSKVIVR--FLTVMMKHGYIGE 49 FeikLaarlevedgrkgylrveLKYrgnkekkrpyivilglkRISkPGlR Fei ++d+r+g+++v+L +r n +++++++R++++ + Rabbit4Lib 50 FEI-------IDDHRAGKIVVNLTGRLN-------KCGVISPRFDVQLKD 85 iYskykelpkvlgGlGIaILSTSkGimTDreARkkgfvGGElLcyVw<-* +++ ++l+++++ +G+++L+TS Gim+++eAR+k+ GG++L++++ Rabbit4Lib 86 LEKWQNNLLPSRQ-FGFIVLTTSAGIMDHEEARRKH-TGGKILGFFF 130 // Query: Rabbit4Lib.137.C1 508 68 464 nseq=2; minus strand; translated Scores for sequence family classification (score includes all domains): Model Description Score E-value N -------- ----------- ----- ------- --- RnaseA Pancreatic ribonuclease 102.0 1.2e-26 1 Parsed for domains: Model Domain seq-f seq-t hmm-f hmm-t score E-value -------- ------- ----- ----- ----- ----- ----- ------- RnaseA 1/1 38 130 .. 1 132 [] 102.0 1.2e-26 Alignments of top-scoring domains: RnaseA: domain 1 of 1, from 38 to 130: score 102.0, E = 1.2e-26 *->esrAqkFlrQHiDspktsssnpnYCNqMMDkrRnmtqgrCKpvNTFv +sr+++Fl+QH+D+ k+ ++n++YC++MM krR++t+ +CK++NTFv Rabbit4Lib 38 DSRYKHFLTQHYDA-KPFGRNDRYCETMM-KRRDLTS-PCKDTNTFV 81 HesladVkaVCsqkNvtCkNGqkNCyqSkssfqiTdCrltggsqkyPnCr H+++ ++k VC++kN++++ kN+++Skssfq+T + g P Rabbit4Lib 82 HGNKGSIKDVCEDKNGKPYG--KNFRISKSSFQVTIANTWEGP---P--- 123 YrtsagtkhIiVACEgrddPpyynPyvPVHFDasv<-* g + + Rabbit4Lib 124 ---------------G-------L------LACAF 130 // Query: Rabbit4Lib.137.C2 226 762 1109 nseq=4; translated Scores for sequence family classification (score includes all domains): Model Description Score E-value N -------- ----------- ----- ------- --- [no hits above thresholds] Parsed for domains: Model Domain seq-f seq-t hmm-f hmm-t score E-value -------- ------- ----- ----- ----- ----- ----- ------- [no hits above thresholds] Alignments of top-scoring domains: [no hits above thresholds] // Query: Rabbit4Lib.139.C1 721 1 797 nseq=21; minus strand; translated Scores for sequence family classification (score includes all domains): Model Description Score E-value N -------- ----------- ----- ------- --- Ribosomal_S4e Ribosomal family S4e 158.2 1.4e-43 1 KOW KOW motif 34.7 2.1e-06 1 S4 S4 domain 23.2 0.0061 1 Parsed for domains: Model Domain seq-f seq-t hmm-f hmm-t score E-value -------- ------- ----- ----- ----- ----- ----- ------- S4 1/1 23 71 .. 1 48 [] 23.2 0.0061 Ribosomal_S4e 1/1 75 151 .. 1 85 [] 158.2 1.4e-43 KOW 1/1 156 192 .. 1 40 [] 34.7 2.1e-06 Alignments of top-scoring domains: S4: domain 1 of 1, from 23 to 71: score 23.2, E = 0.0061 *->mRLDkvL.arlglasSRseArqlIrhGhVkVNGkvvkdpsyrvkpgD L ++L+ rl++a + e++++++++ +k++Gkv +d y+ +D Rabbit4Lib 23 LPLIIFLrNRLKYALTGDEVKKICMQRFIKIDGKVRTDITYPAGFMD 69 vi<-* vi Rabbit4Lib 70 VI 71 Ribosomal_S4e: domain 1 of 1, from 75 to 151: score 158.2, E = 1.4e-43 *->ktnenYRvlyDekGRlvlheIsdEdAkyKLcKvrnktlgkgGvpqLn kt+en+R++yD+kGR+++h+I++E+AkyKLcKvr++++g++G+p+L+ Rabbit4Lib 75 KTGENFRLIYDTKGRFAVHRITPEEAKYKLCKVRKIFVGTKGIPHLV 121 lhDGRtliikyddpsKAEedlikvgDsikislpeqeIv<-* +hD Rt i+y+dp likv+D+i+i+ ++++I+ Rabbit4Lib 122 THDART--IRYPDP------LIKVNDTIQIDFETGKIT 151 KOW: domain 1 of 1, from 156 to 192: score 34.7, E = 2.1e-06 *->fkkGdvVrVisGpfkGkkGkVvevdpkkGHGslknrVvve<-* f G++++V++G + G++G++++ +++ Gs++ V+v+ Rabbit4Lib 156 FDTGNLCMVTGGANLGRIGVITNRERHP--GSFD-VVHVK 192 // Query: Rabbit4Lib.139.C2 583 1 632 nseq=8; minus strand; translated Scores for sequence family classification (score includes all domains): Model Description Score E-value N -------- ----------- ----- ------- --- Ribosomal_S4e Ribosomal family S4e 160.7 2.5e-44 1 KOW KOW motif 34.7 2.1e-06 1 Parsed for domains: Model Domain seq-f seq-t hmm-f hmm-t score E-value -------- ------- ----- ----- ----- ----- ----- ------- Ribosomal_S4e 1/1 18 94 .. 1 85 [] 160.7 2.5e-44 KOW 1/1 99 135 .. 1 40 [] 34.7 2.1e-06 Alignments of top-scoring domains: Ribosomal_S4e: domain 1 of 1, from 18 to 94: score 160.7, E = 2.5e-44 *->ktnenYRvlyDekGRlvlheIsdEdAkyKLcKvrnktlgkgGvpqLn kt+en+R++yD+kGR+++h+I++E+AkyKLcKvr++++g++G+p+L+ Rabbit4Lib 18 KTGENFRLIYDTKGRFAVHRITPEEAKYKLCKVRKIFVGTKGIPHLV 64 lhDGRtliikyddpsKAEedlikvgDsikislpeqeIv<-* +hD Rt i+y+dp likv+D+i+i+l++++I+ Rabbit4Lib 65 THDART--IRYPDP------LIKVNDTIQIDLETGKIT 94 KOW: domain 1 of 1, from 99 to 135: score 34.7, E = 2.1e-06 *->fkkGdvVrVisGpfkGkkGkVvevdpkkGHGslknrVvve<-* f G++++V++G + G++G++++ +++ Gs++ V+v+ Rabbit4Lib 99 FDTGNLCMVTGGANLGRIGVITNRERHP--GSFD-VVHVK 135 // Query: Rabbit4Lib.139.C3 396 52 339 nseq=2; minus strand; translated Scores for sequence family classification (score includes all domains): Model Description Score E-value N -------- ----------- ----- ------- --- KOW KOW motif 34.7 2.1e-06 1 Parsed for domains: Model Domain seq-f seq-t hmm-f hmm-t score E-value -------- ------- ----- ----- ----- ----- ----- ------- KOW 1/1 7 43 .. 1 40 [] 34.7 2.1e-06 Alignments of top-scoring domains: KOW: domain 1 of 1, from 7 to 43: score 34.7, E = 2.1e-06 *->fkkGdvVrVisGpfkGkkGkVvevdpkkGHGslknrVvve<-* f G++++V++G + G++G++++ +++ Gs++ V+v+ Rabbit4Lib 7 FDTGNLCMVTGGANLGRIGVITNRERHP--GSFD-VVHVK 43 // Query: Rabbit4Lib.141.C1 268 1 358 nseq=2; minus strand; translated Scores for sequence family classification (score includes all domains): Model Description Score E-value N -------- ----------- ----- ------- --- [no hits above thresholds] Parsed for domains: Model Domain seq-f seq-t hmm-f hmm-t score E-value -------- ------- ----- ----- ----- ----- ----- ------- [no hits above thresholds] Alignments of top-scoring domains: [no hits above thresholds] // Query: Rabbit4Lib.141.C2 167 1 848 nseq=2; minus strand; translated Scores for sequence family classification (score includes all domains): Model Description Score E-value N -------- ----------- ----- ------- --- Ribosomal_L4 Ribosomal protein L4/L1 family 280.2 2.6e-80 1 Parsed for domains: Model Domain seq-f seq-t hmm-f hmm-t score E-value -------- ------- ----- ----- ----- ----- ----- ------- Ribosomal_L4 1/1 34 277 .. 1 245 [] 280.2 2.6e-80 Alignments of top-scoring domains: Ribosomal_L4: domain 1 of 1, from 34 to 277: score 280.2, E = 2.6e-80 *->eeillpaVFkeeirpdlVhravlaqqankRQgYgvdetAgtktrAEV +++ ++ Fk++irpd+V+++++++++n+RQ+Y+v+e+Ag++t+AE+ Rabbit4Lib 34 QKCDFARLFKAPIRPDIVNFVHTNLRKNNRQPYAVSELAGHQTSAES 80 sGgGRKpar.qkgtgrARqhRSGgsarsPqarGGgvafGPKprrryheki +G +r+ + A++hRSG++a++ a ++ + r+h+++ Rabbit4Lib 81 WGLAE-LWReFPECEVAGTHRSGQGAFGKCAEEAXMFXTNQNLGRWHRRV 129 NkKerRlAlrSALaakAqpdLVkaRGHviEnvpEvPLVVsDdveslkKTK N+ ++R+A++SALaa+A p+LV+++ + + LVV+D+ve +kKTK Rabbit4Lib 130 NTTQKRYAICSALAASALPALVMSKVSYXRKCRSFLLVVEDKVEGYKKTK 179 eavevlenlgvvedferakekpktRagkgklrgrrydkrrgpLvVvgddd eav +l++l+++ d+ +++ ++++Ragkgk+r+r +++rrgp+v++++d Rabbit4Lib 180 EAVLLLKKLKAWNDIKKVYASQRMRAGKGKMRNRPRIQRRGPCVIYNED- 228 envvkaaRNipGVdvvtvnnLNlldLApgGHpGrkvVwTesAlekldev< +++vka+RNipG+++++v +LN+l+LApgGH+ r+++w esA+ kl Rabbit4Lib 229 NGIVKAFRNIPGITLLNVTKLNILKLAPGGHVXRFCIWXESAFRKLTTC 277 -* Rabbit4Lib - - // Query: Rabbit4Lib.141.C3 790 1 1032 nseq=2; minus strand; translated Scores for sequence family classification (score includes all domains): Model Description Score E-value N -------- ----------- ----- ------- --- Ribosomal_L4 Ribosomal protein L4/L1 family 248.3 1e-70 1 Parsed for domains: Model Domain seq-f seq-t hmm-f hmm-t score E-value -------- ------- ----- ----- ----- ----- ----- ------- Ribosomal_L4 1/1 31 253 .. 1 245 [] 248.3 1e-70 Alignments of top-scoring domains: Ribosomal_L4: domain 1 of 1, from 31 to 253: score 248.3, E = 1e-70 *->eeillpaVFkeeirpdlVhravlaqqankRQgYgvdetAgtktrAEV ++++lpaVFk++irpd+V+++++++++n+RQ+Y+v+e+Ag++t+AE Rabbit4Lib 31 KNVTLPAVFKAPIRPDIVNFVHTNLRKNNRQPYAVSELAGHQTSAE- 76 sGgGRKpar.qkgtgrARqhRSGgs.arsPqarGGgvafGPKprrryhek G +r+ + A++ ++ar+P+ G + h++ Rabbit4Lib 77 CGVLAELWReFPECEVAGR----TDpARVPL--------GICAEE-AHVR 113 iNkKerRlAlrSALaakAqpdLVkaRGHviEnvpEvPLVVsDdveslkKT N++ + A+ k++ iE+vpE+PLVV+D+ve +kKT Rabbit4Lib 114 TNQNLAASAFQRWSCLKVI---------XIEEVPELPLVVEDKVEGYKKT 154 KeavevlenlgvvedferakekpktRagkgklrgrrydkrrgpLvVvgdd Keav +l++l+++ d+ +++ ++++Ragkgk+r+rr+++rrgp+v++++d Rabbit4Lib 155 KEAVLLLKKLKAWNDIKKVYASQRMRAGKGKMRNRRRIQRRGPCVIYNED 204 denvvkaaRNipGVdvvtvnnLNlldLApgGHpGrkvVwTesAlekldev +++vka+RNipG+++++v +LN+l+LApgGH+Gr+++wTesA+ kld++ Rabbit4Lib 205 -NGIVKAFRNIPGITLLNVTKLNILKLAPGGHVGRFCIWTESAFRKLDDL 253 <-* Rabbit4Lib - - // Query: Rabbit4Lib.141.C4 826 1 976 nseq=5; minus strand; translated Scores for sequence family classification (score includes all domains): Model Description Score E-value N -------- ----------- ----- ------- --- Ribosomal_L4 Ribosomal protein L4/L1 family 224.2 1.9e-63 1 Parsed for domains: Model Domain seq-f seq-t hmm-f hmm-t score E-value -------- ------- ----- ----- ----- ----- ----- ------- Ribosomal_L4 1/1 1 232 [. 1 245 [] 224.2 1.9e-63 Alignments of top-scoring domains: Ribosomal_L4: domain 1 of 1, from 1 to 232: score 224.2, E = 1.9e-63 *->eeillpaVFkeeirpdlVhravlaqqankRQgYgvdetAgtktrAEV ++ +V+++++++++n+RQ+Y+v+e+Ag++t+AE Rabbit4Lib 1 ------------XHASIVNFVHTNLRKNNRQPYAVSELAGHQTSAE- 34 sGgGRKpar.qkgtgrARqhRSGgs.arsPqarGGgvafGPKprrryhe. G +r+ + A++ ++ar+P+ a+ +r ++++ Rabbit4Lib 35 CGVLAELWReFPECEVAGR----TDpARVPLGICAEEAH---VRTNQNLa 77 .....kiNkKerRlAlrSALaakAqpdLVkaRGHviEnvpEvPLVVsDdv ++ ++N+ ++R+A++SALaa+A + iE+vpE+PLVV+D+v Rabbit4Lib 78 avgtxRVNTTQKRYAICSALAASAFQRWSCLKVIXIEEVPELPLVVEDKV 127 eslkKTKeavevlenlgvvedferakekpktRagkgklrgrrydkrrgpL e +kKTKeav +l++l+++ d+ +++ ++++Ragkgk+r+rr+++rrgp+ Rabbit4Lib 128 EGYKKTKEAVLLLKKLKAWNDIKKVYASQRMRAGKGKMRNRRRIQRRGPC 177 vVvgdddenvvkaaRNipGVdvvtvnnLNlldLApgGHpGrkvVwTesAl v++++d +++vka+RNipG+++++v +LN+l+LApgGH+Gr+++wTesA+ Rabbit4Lib 178 VIYNED-NGIVKAFRNIPGITLLNVTKLNILKLAPGGHVGRFCIWTESAF 226 ekldev<-* kld++ Rabbit4Lib 227 RKLDDL 232 // Query: Rabbit4Lib.141.C5 511 58 849 nseq=2; minus strand; translated Scores for sequence family classification (score includes all domains): Model Description Score E-value N -------- ----------- ----- ------- --- Ribosomal_L4 Ribosomal protein L4/L1 family 286.4 3.6e-82 1 Parsed for domains: Model Domain seq-f seq-t hmm-f hmm-t score E-value -------- ------- ----- ----- ----- ----- ----- ------- Ribosomal_L4 1/1 19 262 .. 1 245 [] 286.4 3.6e-82 Alignments of top-scoring domains: Ribosomal_L4: domain 1 of 1, from 19 to 262: score 286.4, E = 3.6e-82 *->eeillpaVFkeeirpdlVhravlaqqankRQgYgvdetAgtktrAEV +++ ++ Fk++irpd+V+++++++++n+RQ+Y+v+e+Ag++t+AE+ Rabbit4Lib 19 QKCDFARLFKAPIRPDIVNFVHTNLRKNNRQPYAVSELAGHQTSAES 65 sGgGRKpar.qkgtgrARqhRSGgsarsPqarGGgvafGPKprrryheki +G +r+ + A++hRSG++a++ a ++ + r+h+++ Rabbit4Lib 66 WGLAE-LWReFPECEVAGTHRSGQGAFGKCAEEAXMFXTNQNLGRWHRRV 114 NkKerRlAlrSALaakAqpdLVkaRGHviEnvpEvPLVVsDdveslkKTK N+ ++R+A++SALaa+A p+LV+++ + + LVV+D+ve +kKTK Rabbit4Lib 115 NTTQKRYAICSALAASALPALVMSKVSYXRKCRSFLLVVEDKVEGYKKTK 164 eavevlenlgvvedferakekpktRagkgklrgrrydkrrgpLvVvgddd eav +l++l+++ d+ +++ ++++Ragkgk+r+rr+++rrgp+v++++d Rabbit4Lib 165 EAVLLLKKLKAWNDIKKVYASQRMRAGKGKMRNRRRIQRRGPCVIYNED- 213 envvkaaRNipGVdvvtvnnLNlldLApgGHpGrkvVwTesAlekldev< +++vka+RNipG+++++v +LN+l+L pgG +Gr+++w esA+ kld++ Rabbit4Lib 214 NGIVKAFRNIPGITLLNVTKLNILKLRPGGXVGRFCIWNESAFRKLDDL 262 -* Rabbit4Lib - - // Query: Rabbit4Lib.142.C1 126 1 172 nseq=2; minus strand; translated Scores for sequence family classification (score includes all domains): Model Description Score E-value N -------- ----------- ----- ------- --- [no hits above thresholds] Parsed for domains: Model Domain seq-f seq-t hmm-f hmm-t score E-value -------- ------- ----- ----- ----- ----- ----- ------- [no hits above thresholds] Alignments of top-scoring domains: [no hits above thresholds] // Query: Rabbit4Lib.142.C2 179 531 656 nseq=2; minus strand; translated Scores for sequence family classification (score includes all domains): Model Description Score E-value N -------- ----------- ----- ------- --- [no hits above thresholds] Parsed for domains: Model Domain seq-f seq-t hmm-f hmm-t score E-value -------- ------- ----- ----- ----- ----- ----- ------- [no hits above thresholds] Alignments of top-scoring domains: [no hits above thresholds] // Query: Rabbit4Lib.142.C3 179 613 738 nseq=2; minus strand; translated Scores for sequence family classification (score includes all domains): Model Description Score E-value N -------- ----------- ----- ------- --- [no hits above thresholds] Parsed for domains: Model Domain seq-f seq-t hmm-f hmm-t score E-value -------- ------- ----- ----- ----- ----- ----- ------- [no hits above thresholds] Alignments of top-scoring domains: [no hits above thresholds] // Query: Rabbit4Lib.144.C1 199 1 303 nseq=2; minus strand; translated Scores for sequence family classification (score includes all domains): Model Description Score E-value N -------- ----------- ----- ------- --- [no hits above thresholds] Parsed for domains: Model Domain seq-f seq-t hmm-f hmm-t score E-value -------- ------- ----- ----- ----- ----- ----- ------- [no hits above thresholds] Alignments of top-scoring domains: [no hits above thresholds] // Query: Rabbit4Lib.145.C1 369 1 583 nseq=2; minus strand; translated Scores for sequence family classification (score includes all domains): Model Description Score E-value N -------- ----------- ----- ------- --- COLFI Fibrillar collagen C-terminal domain 189.8 4.3e-53 1 Parsed for domains: Model Domain seq-f seq-t hmm-f hmm-t score E-value -------- ------- ----- ----- ----- ----- ----- ------- COLFI 1/1 1 143 [. 1 226 [] 189.8 4.3e-53 Alignments of top-scoring domains: COLFI: domain 1 of 1, from 1 to 143: score 189.8, E = 4.3e-53 *->lksPeGksrknPARtCkDLfLchpefksGeYWiDPNqGCikDAikVf Rabbit4Lib - ----------------------------------------------- - CnkrfetGvgeTCisptpksvpkRiksWykgkskdkKhvWFgetmegGfk t pk +vW+g +m++G++ Rabbit4Lib 1 -----XTR-------------PK--------------PVWYGLDMNRGSQ 18 fsYiddelnpeisnvQlTFLRLLSteAsQNiTYhCKNSvAYmDeatGNlk f+Y +d+++p+++++Q+TFLRLLS+eAsQNiTY+CKNSv+YmD++t++lk Rabbit4Lib 19 FTY-GDHQSPNTAITQMTFLRLLSKEASQNITYICKNSVGYMDDQTKSLK 67 kAlilmgSnDvElsadgnskFtYtvlGeDGCssrtgewgKTViEyeTkKt kA++l+g+nD+E++a+gn +F+Ytvl D+Cs+r+g+ gKTV+Ey+T+++ Rabbit4Lib 68 KAVVLKGANDLEIKAEGNVRFRYTVL-HDTCSKRNGNMGKTVFEYRTQNV 116 tRLPIvDiApsDiGgedQeFGveiGPVCF<-* +RLPI+DiAp+D+G++dQeFG+e+G F Rabbit4Lib 117 ARLPIIDIAPVDVGSTDQEFGIEVGQ--F 143 // Query: Rabbit4Lib.147.C1 1108 189 920 nseq=3; minus strand; translated Scores for sequence family classification (score includes all domains): Model Description Score E-value N -------- ----------- ----- ------- --- Vicilin_N Vicilin N terminal region -84.0 3.7 1 Parsed for domains: Model Domain seq-f seq-t hmm-f hmm-t score E-value -------- ------- ----- ----- ----- ----- ----- ------- Vicilin_N 1/1 26 135 .. 1 183 [] -84.0 3.7 Alignments of top-scoring domains: Vicilin_N: domain 1 of 1, from 26 to 135: score -84.0, E = 3.7 *->pGRrnYeDDPqqrYEqCqRRCesetr.GqrEQqqCEeRCkeqykEeq +GR++ P + R + r+G Q+ E++ ++ k + Rabbit4Lib 26 YGRDS--GPPAKKIRSSPREAKNKRRsGKNSQEDSEDSEEKDVKTKK 70 qqqRqReEDPQrrYeeCqqrCqqeETEeRhrptCqQrCerrYEkeqqqQQ + ED E ke + Rabbit4Lib 71 DDS-HSAEDSE------------DE------------------KEDHK-- 87 KRYEEQQREDEEKYEERmKEEDNKRDPqqRqyqeCQqRCqqQEQrPrrqQ Rq + + + Rabbit4Lib 88 ---------------------------NVRQQRQAASKAASKQ------- 103 QCqReCREQYqEq...qerGeeenknPQWReeeeersEEG<-* RE E+ ++ e eee + P e+ s+E Rabbit4Lib 104 ------REMLMEDvgsEEEPEEEDEAPF--QEKDSGSDED 135 // Query: Rabbit4Lib.148.C2 323 119 367 nseq=3; minus strand; translated Scores for sequence family classification (score includes all domains): Model Description Score E-value N -------- ----------- ----- ------- --- [no hits above thresholds] Parsed for domains: Model Domain seq-f seq-t hmm-f hmm-t score E-value -------- ------- ----- ----- ----- ----- ----- ------- [no hits above thresholds] Alignments of top-scoring domains: [no hits above thresholds] // Query: Rabbit4Lib.154.C1 565 1 896 nseq=5; translated Scores for sequence family classification (score includes all domains): Model Description Score E-value N -------- ----------- ----- ------- --- [no hits above thresholds] Parsed for domains: Model Domain seq-f seq-t hmm-f hmm-t score E-value -------- ------- ----- ----- ----- ----- ----- ------- [no hits above thresholds] Alignments of top-scoring domains: [no hits above thresholds] // Query: Rabbit4Lib.156.C1 1222 27 1377 nseq=10; minus strand; translated Scores for sequence family classification (score includes all domains): Model Description Score E-value N -------- ----------- ----- ------- --- PCI PCI domain 90.7 2.9e-23 1 TPR_3 Tetratricopeptide repeat 10.7 3.1 1 Parsed for domains: Model Domain seq-f seq-t hmm-f hmm-t score E-value -------- ------- ----- ----- ----- ----- ----- ------- TPR_3 1/1 128 164 .. 1 38 [] 10.7 3.1 PCI 1/1 290 395 .. 1 135 [] 90.7 2.9e-23 Alignments of top-scoring domains: TPR_3: domain 1 of 1, from 128 to 164: score 10.7, E = 3.1 *->leylyslWLAavfynkgkyqeAeelfs.Yallaildken<-* l+ ly + A +y+ g+y A+e++ +++l ++ n Rabbit4Lib 128 LDTLYRY--AKFQYECGNYSGAAEYLYfFRVLVPATDRN 164 PCI: domain 1 of 1, from 290 to 395: score 90.7, E = 2.9e-23 *->payleLleafysgd.laefeelladhVvAkamkGwqkeeellqdpgl ++++e++e++y + +++++++ l+++ e+ l +d +l Rabbit4Lib 290 DPITEFVECLYVNFdFDGAQKKLREC-----------ESVLVNDFFL 325 aekvwlegdkhleeLrrkirelnllqlakftypapyssislsdlaellgl +le++ ++ r+ + ++++ ++++is+ +la +l++ Rabbit4Lib 326 VA--------CLEDFIENARLFIFETFCR-----IHQCISINMLADKLNM 362 svvedvlqdevEkilsklIadgrirgkIDqvngivvvse<-* ++ +e+E+++++lI++ r+++kID++ g vv+ Rabbit4Lib 363 TP------EEAERWIVNLIRNARLDAKIDSKLGHVVMGN 395 // Query: Rabbit4Lib.157.C1 895 1 1107 nseq=6; minus strand; translated Scores for sequence family classification (score includes all domains): Model Description Score E-value N -------- ----------- ----- ------- --- PI3_PI4_kinase Phosphatidylinositol 3- and 4-kinase 334.9 9.1e-97 1 Parsed for domains: Model Domain seq-f seq-t hmm-f hmm-t score E-value -------- ------- ----- ----- ----- ----- ----- ------- PI3_PI4_kinase 1/1 102 321 .. 1 329 [] 334.9 9.1e-97 Alignments of top-scoring domains: PI3_PI4_kinase: domain 1 of 1, from 102 to 321: score 334.9, E = 9.1e-97 *->gypfifKgGdDLrsrQDelvlQligVfKPkDEEPyApnNPkgtkvsq + +ifK+GdDLr QD+l+lQ+i Rabbit4Lib 102 NNEIIFKNGDDLR--QDMLTLQII----------------------- 123 GerlmnkllkgegldrrRnlqltaYlviplgpgsGlIEwvpnsttlaeil r+m +++++ gld+r + +Y +++ g++ GlIE+v ns+t+++i+ Rabbit4Lib 124 --RIMENIWQNQGLDLR----MLPYGCLSIGDCVGLIEVVRNSHTIMQIQ 167 rtymvkksikpfnksrffkdkkttkkleknakllkehkllqmvldrkqlt ++ + k++ ++ Rabbit4Lib 168 CKGGLKGALQFNS------------------------------------- 180 llekvevFeeklsntpkpgllqwFvkknpdaapyeewfeRfardnfvrSc + l+qw+++kn+ + ++++ a+d f+rSc Rabbit4Lib 181 -----------------HTLHQWLKDKNKGE----IYDA--AIDLFTRSC 207 AgmsvldYiLGigDRHldNiLvkkndkktGklfHIDFGlcfghvkgkrgp Ag++v+++iLGigDRH++Ni+v k++G+lfHIDFG++++h k k+g Rabbit4Lib 208 AGYCVATFILGIGDRHNSNIMV----KDDGQLFHIDFGHFLDHKKKKFGY 253 kpervPFrLTrWPQaklpmveamggyiasLgpsgdeglFrelceeayral k+ervPF+LT+ ++ ++ ++ +++ ++++++F+e+c++ay+a+ Rabbit4Lib 254 KRERVPFVLTQ------DFLIVISKGAQECTKTREFERFQEMCYKAYLAI 297 RrnanlllnlLkqkAvarGelmledglpdwrs<-* R++anl++nl+ ++ml +g+p++ s Rabbit4Lib 298 RQHANLFINLF--------SMMLGSGMPELQS 321 // Query: Rabbit4Lib.159.C1 1585 1 615 nseq=2; minus strand; translated Scores for sequence family classification (score includes all domains): Model Description Score E-value N -------- ----------- ----- ------- --- Transaldolase Transaldolase 219.9 3.6e-62 1 Parsed for domains: Model Domain seq-f seq-t hmm-f hmm-t score E-value -------- ------- ----- ----- ----- ----- ----- ------- Transaldolase 1/1 1 189 [. 1 371 [] 219.9 3.6e-62 Alignments of top-scoring domains: Transaldolase: domain 1 of 1, from 1 to 189: score 219.9, E = 3.6e-62 *->kvvlDdLSRDtgdieaIkkyapigaiqGvTTNPSLilkaiakkpaYe Rabbit4Lib - ----------------------------------------------- - klIddavayGkkkgktikeqvrnAcDkLavefGleilkivEKDgepGrVS Rabbit4Lib - -------------------------------------------------- - tEVDARlSfDteamikeArrLikklYkdaGiskenilIKIPsTweGRPhl + ilIK++sTweG + Rabbit4Lib 1 ----------------------R------------ILIKLASTWEG---I 13 kAikeLekehGInvNvTLlFSPKiAGEfaQalaaAeAglaGlEKaleeGk +A keLe++hG ++N+TLlFS faQa+a+AeAg Rabbit4Lib 14 QAGKELEQQHGVHCNMTLLFS------FAQAVACAEAG------------ 45 DlSkIvtliSPFVgRIddwydastdk.eyavegdpGvksVkdiyqyYkkh vtliSPFVgRI+dw+ a+t+k+ y++++dpGv+sV++iy+yYkk+ Rabbit4Lib 46 -----VTLISPFVGRILDWHVANTEKkAYEPLEDPGVRSVTKIYNYYKKF 90 iEsdQrQaLaAkgykvqrtLwASTeVlgASfrnpgeileclLaGcDslTi gyk T+V+gASfrn+gei++ LaGcD+lTi Rabbit4Lib 91 ------------GYK--------TIVMGASFRNTGEIKA--LAGCDFLTI 118 pPalldqlldheealnrkLdpesakae.pekiseievikdekkfrwnine +P+ll +l+ + +l+++L++++a+a+++e+++ + de++frw +ne Rabbit4Lib 119 SPKLLGELQRDSTKLAPVLSAKAAQASdLEQVH---L--DEAAFRWLHNE 163 damAvellseGirkFkkDwekLlksl<-* d+mAve+ls+GirkF++D++kL++ l Rabbit4Lib 164 DQMAVEKLSDGIRKFAADAVKLERVL 189 // Query: Rabbit4Lib.159.C2 1451 282 1054 nseq=2; translated Scores for sequence family classification (score includes all domains): Model Description Score E-value N -------- ----------- ----- ------- --- Transaldolase Transaldolase 87.6 2.5e-22 1 GRP Glycine rich protein family -37.1 3.3 1 Collagen Collagen triple helix repeat (20 copies -63.9 4.8 1 Parsed for domains: Model Domain seq-f seq-t hmm-f hmm-t score E-value -------- ------- ----- ----- ----- ----- ----- ------- GRP 1/1 118 177 .. 1 134 [] -37.1 3.3 Collagen 1/1 122 181 .. 1 60 [] -63.9 4.8 Transaldolase 1/1 1 232 [. 1 371 [] 87.6 2.5e-22 Alignments of top-scoring domains: GRP: domain 1 of 1, from 118 to 177: score -37.1, E = 3.3 *->MASKallLLGLlLAavLLisSEVaaadltEeaeksnteKseseeeVq Ka L+ + +L is + + s + ++V Rabbit4Lib 118 ---KA---LAGC--DFLTISPKLLGELQ---------RDSTKLAPVL 147 ddkyGGgGyhgGGynGGGGgGfgggGgGGYgGgGGggygGGGyygGGGGY +k G G +G GG + gGGG+ g+ Rabbit4Lib 148 SAKA---------------------GEAGAPGAGG-RAGGGGGVGR---- 171 gGGGghvayGGgGGgygGGGGypGGyGngGGGYgGGG<-* G+ G+ Rabbit4Lib 172 -------------------------------GRPAGP 177 Collagen: domain 1 of 1, from 122 to 181: score -63.9, E = 4.8 *->GppGppGppGppGppGppGppGpaGapGppGppGepGpPGppGppGp G + +p + G+ + + ++ +G +G+pG+ G +G G Rabbit4Lib 122 GCDFLTISPKLLGELQRDSTKLAPVLSAKAGEAGAPGAGGRAGGGGG 168 pGppGapGapGpp<-* G ++G+ + Rabbit4Lib 169 VGRGRPAGPWCVC 181 Transaldolase: domain 1 of 1, from 1 to 232: score 87.6, E = 2.5e-22 *->kvvlDdLSRDtgdieaIkkyapigaiqGvTTNPSLilkaiakkpaYe Rabbit4Lib - ----------------------------------------------- - klIddavayGkkkgktikeqvrnAcDkLavefGleilkivEKDgepGrVS Rabbit4Lib - -------------------------------------------------- - tEVDARlSfDteamikeArrLikklYkdaGiskenilIKIPsTweGRPhl + + Rabbit4Lib 1 ----------------------R-E------------------------- 2 kAikeLekehGInvNvTLlFSPKiAGEfaQalaaAeAglaGlEKaleeGk Le++hG ++N+TLlFS faQa+a+AeAg Rabbit4Lib 3 -----LEQQHGVHCNMTLLFS------FAQAVACAEAG------------ 29 DlSkIvtliSPFVgRIddwydastdke....................... vtliSPFVgRI+dw+ a+t+k+ ++ +++++ + + + ++ + Rabbit4Lib 30 -----VTLISPFVGRILDWHVANTEKKayepledpgeaagagcrvgqadx 74 .....yavegdpGvksVkdiyqyYkkhiEsdQrQaLaAkgykvqrtLwAS +++ ++ + +Gv+sV++iy+yYkk+ gyk Rabbit4Lib 75 seradL-CPAPAGVRSVTKIYNYYKKF------------GYK-------- 103 TeVlgASfrnpgeileclLaGcDslTipPalldqlldheealnrkLdpes T+V+gASfrn+gei++ LaGcD+lTi+P+ll +l+ + +l+++L++++ Rabbit4Lib 104 TIVMGASFRNTGEIKA--LAGCDFLTISPKLLGELQRDSTKLAPVLSAKA 151 a...........................kae.pekiseievik.dekkfr ++ + ++ +++ +++++ +++++ ++ ++ ++++ s+ e + de++fr Rabbit4Lib 152 GeagapgaggragggggvgrgrpagpwcVCVpAAQASDLEQVHlDEAAFR 201 wninedamAvellseGirkFkkDwekLlksl<-* w +ned+mAve+ls+GirkF++D++kL++ l Rabbit4Lib 202 WLHNEDQMAVEKLSDGIRKFAADAVKLERVL 232 // Query: Rabbit4Lib.160.C1 797 1 965 nseq=2; minus strand; translated Scores for sequence family classification (score includes all domains): Model Description Score E-value N -------- ----------- ----- ------- --- Laminin_G_2 Laminin G domain 69.9 5.4e-17 1 Laminin_G_1 Laminin G domain 22.9 9.5e-05 1 Parsed for domains: Model Domain seq-f seq-t hmm-f hmm-t score E-value -------- ------- ----- ----- ----- ----- ----- ------- Laminin_G_2 1/1 77 202 .. 1 141 [] 69.9 5.4e-17 Laminin_G_1 1/1 77 205 .. 1 154 [] 22.9 9.5e-05 Alignments of top-scoring domains: Laminin_G_2: domain 1 of 1, from 77 to 202: score 69.9, E = 5.4e-17 *->FRTatqpnGlLlyaggk.glpdtadpksdKflaLeLvdGrlvlrydl +R+ ++++G L + ++ +g + +l + +++G++ + ++ Rabbit4Lib 77 VRP-RSSSGTLVHGHSVnG---------E-YLNVHMKNGQVIVKVNN 112 G..sgg.vlltsg.klnDGqWHtVsverngrsvtLsVDgg.vv.g.spgs G ++ ++++ s+ ++ G ++ +r+ + v+L VD + ++ +++ + Rabbit4Lib 113 GirDFStSVTPSKvSVTAGG-TELQXIRDSNVVQLDVDSEvNHvVgPLNP 161 sdtlslnlngplylGGlpessksslltltaaqnlvvvs.gFvGCirdvri + ++ +p+++GG+pe +++l++ ++F+GCir ++i Rabbit4Lib 162 K---PVDYREPVFVGGVPEFLLTPRLAP---------GkPFTGCIRHFVI 199 nge<-* +g+ Rabbit4Lib 200 DGR 202 Laminin_G_1: domain 1 of 1, from 77 to 205: score 22.9, E = 9.5e-05 *->FRTtepsGlLllgYnGtntdrrgkkeigdDFlaleLvdGrlevsydl +R +++sG L + ++++ +l + + +G++ v++++ Rabbit4Lib 77 VRPRSSSGTLV--HGHSVNGE---------YLNVHMKNGQVIVKVNN 112 GsghrlrpavvrsgdrvlnDGkWHrvelerngrkgtLsVd.geervvdge G + v+ s++ ++ G el ++++ ++++d + e ++ Rabbit4Lib 113 GIR-DFSTSVTPSKVS-VTAGGT---ELQXIRDSNVVQLDvDSE----VN 153 spsgpditsenLdldtppiLyvGGlPelqksvkrrlaaistsFkGCirdv ++gp++++ +d ++p ++vGG P + +++++a +++F GCir Rabbit4Lib 154 HVVGPLNPK-PVDYREP--VFVGGVP---EFLLTPRLAPGKPFTGCIRHF 197 singkpld<-* +i+g+p+ Rabbit4Lib 198 VIDGRPVS 205 // Query: Rabbit4Lib.162.C1 512 1 554 nseq=2; minus strand; translated Scores for sequence family classification (score includes all domains): Model Description Score E-value N -------- ----------- ----- ------- --- Mit_rib_S27 Mitochondrial ribosomal subunit S27 -2.9 0.097 1 Parsed for domains: Model Domain seq-f seq-t hmm-f hmm-t score E-value -------- ------- ----- ----- ----- ----- ----- ------- Mit_rib_S27 1/1 23 114 .. 1 89 [] -2.9 0.097 Alignments of top-scoring domains: Mit_rib_S27: domain 1 of 1, from 23 to 114: score -2.9, E = 0.097 *->karllqvaelsAkIFgqnfNPtGaRtGsKiL....rqrL.kGpalas ++ l + lsA++Fg Pt + + K+++ + q+L k Rabbit4Lib 23 SEYALRMTRLSARLFGEVARPTDSKS-MKVVklfsEQPLaKRKETYD 68 YYpnpd....vlkfrdLKklypdlgfvdpeEqyRlsmvedrKRRgKGAPk +Ypn ++ ++++ + ly d d +E + v +K+RgKG Pk Rabbit4Lib 69 WYPNHNtyfaLMGILRFHGLYRDE-HQDFKE----EQVRLKKLRGKGKPK 113 K<-* K Rabbit4Lib 114 K 114 // Query: Rabbit4Lib.166.C1 535 1 591 nseq=2; minus strand; translated Scores for sequence family classification (score includes all domains): Model Description Score E-value N -------- ----------- ----- ------- --- [no hits above thresholds] Parsed for domains: Model Domain seq-f seq-t hmm-f hmm-t score E-value -------- ------- ----- ----- ----- ----- ----- ------- [no hits above thresholds] Alignments of top-scoring domains: [no hits above thresholds] // Query: Rabbit4Lib.168.C1 217 854 1019 nseq=2; translated Scores for sequence family classification (score includes all domains): Model Description Score E-value N -------- ----------- ----- ------- --- [no hits above thresholds] Parsed for domains: Model Domain seq-f seq-t hmm-f hmm-t score E-value -------- ------- ----- ----- ----- ----- ----- ------- [no hits above thresholds] Alignments of top-scoring domains: [no hits above thresholds] // Query: Rabbit4Lib.173.C1 129 1 144 nseq=3; minus strand; translated Scores for sequence family classification (score includes all domains): Model Description Score E-value N -------- ----------- ----- ------- --- [no hits above thresholds] Parsed for domains: Model Domain seq-f seq-t hmm-f hmm-t score E-value -------- ------- ----- ----- ----- ----- ----- ------- [no hits above thresholds] Alignments of top-scoring domains: [no hits above thresholds] // Query: Rabbit4Lib.174.C1 1534 1 642 nseq=5; minus strand; translated Scores for sequence family classification (score includes all domains): Model Description Score E-value N -------- ----------- ----- ------- --- Ribosomal_L13 Ribosomal protein L13 219.8 3.9e-62 1 Parsed for domains: Model Domain seq-f seq-t hmm-f hmm-t score E-value -------- ------- ----- ----- ----- ----- ----- ------- Ribosomal_L13 1/1 16 132 .. 1 130 [] 219.8 3.9e-62 Alignments of top-scoring domains: Ribosomal_L13: domain 1 of 1, from 16 to 132: score 219.8, E = 3.9e-62 *->wyViDAtgqiLGRLAsevAkllrgKhKatYTPnvDtGdyViVvNAek + V D++g++LGRLA+ vAk+++ G++V+Vv++e Rabbit4Lib 16 VLVLDGRGHLLGRLAAIVAKQVLL------------GRKVVVVRCEG 50 vvisGnkdrtnKlyyrhsgrpgglkkrtfGelipRrPdrIveravrGMLP ++isGn+ ++nKl+y++++r+++++++++G++++R+P+rI++r+vrGMLP Rabbit4Lib 51 INISGNF-YRNKLKYLAFLRKRMNTNPSRGPYHFRAPSRIFWRTVRGMLP 99 HKgklGRalfkkLKVYkGiehPhaaqkpvvldl<-* HK+k+G+a++ +LKV++Gi++P++++k++v+++ Rabbit4Lib 100 HKTKRGQAALDRLKVFDGIPPPYDKKKRMVVPA 132 // Query: Rabbit4Lib.174.C2 1516 1 612 nseq=7; minus strand; translated Scores for sequence family classification (score includes all domains): Model Description Score E-value N -------- ----------- ----- ------- --- Ribosomal_L13 Ribosomal protein L13 219.8 3.9e-62 1 Parsed for domains: Model Domain seq-f seq-t hmm-f hmm-t score E-value -------- ------- ----- ----- ----- ----- ----- ------- Ribosomal_L13 1/1 6 122 .. 1 130 [] 219.8 3.9e-62 Alignments of top-scoring domains: Ribosomal_L13: domain 1 of 1, from 6 to 122: score 219.8, E = 3.9e-62 *->wyViDAtgqiLGRLAsevAkllrgKhKatYTPnvDtGdyViVvNAek + V D++g++LGRLA+ vAk+++ G++V+Vv++e Rabbit4Lib 6 VLVLDGRGHLLGRLAAIVAKQVLL------------GRKVVVVRCEG 40 vvisGnkdrtnKlyyrhsgrpgglkkrtfGelipRrPdrIveravrGMLP ++isGn+ ++nKl+y++++r+++++++++G++++R+P+rI++r+vrGMLP Rabbit4Lib 41 INISGNF-YRNKLKYLAFLRKRMNTNPSRGPYHFRAPSRIFWRTVRGMLP 89 HKgklGRalfkkLKVYkGiehPhaaqkpvvldl<-* HK+k+G+a++ +LKV++Gi++P++++k++v+++ Rabbit4Lib 90 HKTKRGQAALDRLKVFDGIPPPYDKKKRMVVPA 122 // Query: Rabbit4Lib.176.C1 189 199 593 nseq=2; minus strand; translated Scores for sequence family classification (score includes all domains): Model Description Score E-value N -------- ----------- ----- ------- --- [no hits above thresholds] Parsed for domains: Model Domain seq-f seq-t hmm-f hmm-t score E-value -------- ------- ----- ----- ----- ----- ----- ------- [no hits above thresholds] Alignments of top-scoring domains: [no hits above thresholds] // Query: Rabbit4Lib.176.C3 321 185 745 nseq=2; minus strand; translated Scores for sequence family classification (score includes all domains): Model Description Score E-value N -------- ----------- ----- ------- --- [no hits above thresholds] Parsed for domains: Model Domain seq-f seq-t hmm-f hmm-t score E-value -------- ------- ----- ----- ----- ----- ----- ------- [no hits above thresholds] Alignments of top-scoring domains: [no hits above thresholds] // Query: Rabbit4Lib.178.C1 758 1 885 nseq=4; minus strand; translated Scores for sequence family classification (score includes all domains): Model Description Score E-value N -------- ----------- ----- ------- --- Amidinotransf Amidinotransferase 107.0 3.7e-28 1 Parsed for domains: Model Domain seq-f seq-t hmm-f hmm-t score E-value -------- ------- ----- ----- ----- ----- ----- ------- Amidinotransf 1/1 15 290 .. 1 418 [] 107.0 3.7e-28 Alignments of top-scoring domains: Amidinotransf: domain 1 of 1, from 15 to 290: score 107.0, E = 3.7e-28 *->sEiGrLrrVllhrPghfevenltppnldellfddepvpnverAqkeH Gr+ + l + ++e+l+ + ++ +p +++++Aq+eH Rabbit4Lib 15 EGLGRCSHALIRG----VPESLAAGDSAGA---GLPALDLAKAQREH 54 daFvqtLrekaGveVveLpedLlaEaldnapeaReqfIdeflteskigls ++ ++Lr++ G +++eLp++ Rabbit4Lib 55 GVLGGKLRQRLGLQLLELPPE----------------------------- 75 radelkellrsldsldnkeLvekmmgGvrksELPsipkhlslvvsmtaey Rabbit4Lib - -------------------------------------------------- - dFvldepLPnlvFTRDpgavigegvtinrmaapaRrrEtllykyifkhHP epLP D++++ g++++i +p+ r+E++ ++ + Rabbit4Lib 76 -----EPLPLGPLLGDTAVIQGDTALIXTALEPSPRPEVDGVRKAL---- 116 rFkglgipiWwGdyydrdekatiEGeGDvlvlgkGgvvliGvSeRTdrqg ++lg++i +++ de+at++G Dvl++g+ + +++G+S++T + Rabbit4Lib 117 --QDLGLRI----VEMGDENATLDG-TDVLFTGR-E-FFVGLSKWTITEE 157 ieqLaraLfkegfktviavslvpvdrafmHLDTvFtmldedlfliyppil + +a+++ ++ avs+vpv HL ++m ++++++++++ Rabbit4Lib 158 QRXVADTFRDF------AVSTVPVAGPS-HLRGLCGMGGPRTVVAGSSDA 200 dakanfeiyvL.drdgdadliiveeaddlvevlakgLglkkvrlIetGGg ++ka +++ +L+ + + +++ a+d+ + g ++++ Rabbit4Lib 201 AQKAVRAMAALkITXYASLTLPDDAAADFS-FCDLGCQVHPL-------- 241 DlvaaerEdEQwndGcNvLaigPgvVvayadrnntytnelL.eaaGikVi ++ + + + ++e+L++ +++++ Rabbit4Lib 242 ------------FSCTEEVXDL------------PNSQEALqKLSDVTLV 267 eipgSELskGgGGprCMsmpleR<-* ++++SEL+k+g+G++ ++++l Rabbit4Lib 268 PVSCSELEKAGAGLSSLCLVLST 290 // Query: Rabbit4Lib.179.C1 1395 27 1133 nseq=3; minus strand; translated Scores for sequence family classification (score includes all domains): Model Description Score E-value N -------- ----------- ----- ------- --- Sec62 Translocation protein Sec62 492.9 2.4e-144 1 ARD ARD/ARD' family -69.2 7.8 1 Parsed for domains: Model Domain seq-f seq-t hmm-f hmm-t score E-value -------- ------- ----- ----- ----- ----- ----- ------- ARD 1/1 86 210 .. 1 168 [] -69.2 7.8 Sec62 1/1 78 300 .. 1 235 [] 492.9 2.4e-144 Alignments of top-scoring domains: ARD: domain 1 of 1, from 86 to 210: score -69.2, E = 7.8 *->riwimddseegDqrlphhtsPkesaeedelaklggvlrwkldaddee + +m + + D +++ +++ +e + ++ + k +++de Rabbit4Lib 86 ALKVMKMKYDKDIKKEKDKG----KTESGKEEDK--KSKKENIKDEK 126 taeelerirkyknyddvdiskygyksqdvevcpestpnfDeklkkFfeEH t +e+e+ + ++++ + + ++ tp++ e kkF+ E Rabbit4Lib 127 TKKEKEKKKDGEKEESKKE------------ETPGTPKKKETKKKFKLEP 164 lHeDeEiRyiveGtGyFDVrDadkddvWiRvlvekGDLIslPaGIyHRFT + D+++ +++G+ ++ V + d v + +v +LI++ a Rabbit4Lib 165 H--DDQV--FLDGNEVY-VW--IYDPVHFKTFVM--GLILVIA------- 198 ttpdnyvkAlRLFvtkpkWta<-* v A LF p W a Rabbit4Lib 199 ------VIAATLF---PLWPA 210 Sec62: domain 1 of 1, from 78 to 300: score 492.9, E = 2.4e-144 *->lkkqfFFRaKkvvraLedekykekkdKgneespKEEvkkspKekIns lkkqfF+Ra+kv+++++d+++k++kdKg+ es+KEE+kks+Ke n+ Rabbit4Lib 78 LKKQFFHRALKVMKMKYDKDIKKEKDKGKTESGKEEDKKSKKE--NI 122 rekaiekaKelkkdqmaervdKeGDGGlpsqekkeekKKkkkKkvkvLqv ++++++k+Ke+kkd+++e+++Ke ++++++kKK++kKk+k L++ Rabbit4Lib 123 KDEKTKKEKEKKKDGEKEESKKE-------ETPGTPKKKETKKKFK-LEP 164 hpnQaFlDgdevYVWiYdPvPlmtyiiGvllvlavlAlvLFPLWPvflRk h++Q+FlDg+evYVWiYdPv+++t+++G++lv+av+A++LFPLWP+++R+ Rabbit4Lib 165 HDDQVFLDGNEVYVWIYDPVHFKTFVMGLILVIAVIAATLFPLWPAEMRV 214 GVYYLSvGalGflalifvlAIlRlILFvIiwavtgGkhgfWiFPNLteDV GVYYLSvGa++f+a+i++lA++R+ILF+Iiw++tgG+h+fW++PNLt+DV Rabbit4Lib 215 GVYYLSVGAGCFVASILLLAVARCILFLIIWLITGGRHHFWFLPNLTADV 264 GFldSFkPLYtweykgDpekselKKdkKsKkKkkKKes<-* GF+dSF+PLYt+eykg+ k++lKKd+Ks++Kk++K++ Rabbit4Lib 265 GFIDSFRPLYTHEYKGP--KADLKKDEKSETKKQQKSD 300 // Query: Rabbit4Lib.181.C3 195 1 514 nseq=5; minus strand; translated Scores for sequence family classification (score includes all domains): Model Description Score E-value N -------- ----------- ----- ------- --- [no hits above thresholds] Parsed for domains: Model Domain seq-f seq-t hmm-f hmm-t score E-value -------- ------- ----- ----- ----- ----- ----- ------- [no hits above thresholds] Alignments of top-scoring domains: [no hits above thresholds] // Query: Rabbit4Lib.181.C4 708 1 753 nseq=2; minus strand; translated Scores for sequence family classification (score includes all domains): Model Description Score E-value N -------- ----------- ----- ------- --- RRM_1 RNA recognition motif. (a.k.a. RRM, RBD, or 61.9 1.3e-14 1 zf-RanBP Zn-finger in Ran binding protein and others 47.4 3.3e-10 1 DUF348 Domain of unknown function (DUF348) -1.7 7.8 1 Parsed for domains: Model Domain seq-f seq-t hmm-f hmm-t score E-value -------- ------- ----- ----- ----- ----- ----- ------- RRM_1 1/1 57 136 .. 1 74 [] 61.9 1.3e-14 DUF348 1/1 134 190 .. 1 56 [] -1.7 7.8 zf-RanBP 1/1 192 223 .. 1 32 [] 47.4 3.3e-10 Alignments of top-scoring domains: RRM_1: domain 1 of 1, from 57 to 136: score 61.9, E = 1.3e-14 *->lfVgNLppdtteedLkdlFskfGpies........ikivrDttretg +fV +L +++t e + d+F+++G i+ +++++++ i++ +D retg Rabbit4Lib 57 IFVQGLGENVTIESVADYFKQIGIIKTnkktgqpmINLYTD--RETG 101 rskGfaFVeFedeedAekAldalnGkelggrelrv<-* + kG a V F+d+ +A++A+d +Gke+ g++++v Rabbit4Lib 102 KLKGEATVSFDDPPSAKAAIDWFDGKEFSGNPIKV 136 DUF348: domain 1 of 1, from 134 to 190: score -1.7, E = 7.8 *->lasgdtivvrtak.pVtinvDGkerev.wTtAsTVaelLeelGisld +++ + ++ rt+ ++V +v+ + ev+w + TVa ++e+ ++++ Rabbit4Lib 134 IKVCLLLAERTSIgVVAMVVEAEGEEVpWAVEATVAAAVEAVAEEDS 180 eeDkispslds<-* + ++ ++ ds Rabbit4Lib 181 PV-EVVVAGDS 190 zf-RanBP: domain 1 of 1, from 192 to 223: score 47.4, E = 3.3e-10 *->ragsdWdC.issClvqNfatstkCvaCqapkps<-* ag dW+C++++C ++Nf+++++C++C+apkps Rabbit4Lib 192 XAG-DWKCpNPTCENMNFSWRNECNQCKAPKPS 223 // Query: Rabbit4Lib.185.C1 1368 292 1109 nseq=12; minus strand; translated Scores for sequence family classification (score includes all domains): Model Description Score E-value N -------- ----------- ----- ------- --- 14-3-3 14-3-3 protein 498.1 6.6e-146 1 Parsed for domains: Model Domain seq-f seq-t hmm-f hmm-t score E-value -------- ------- ----- ----- ----- ----- ----- ------- 14-3-3 1/1 4 241 .. 1 236 [] 498.1 6.6e-146 Alignments of top-scoring domains: 14-3-3: domain 1 of 1, from 4 to 241: score 498.1, E = 6.6e-146 *->reelvylakLaeqaEryeemveamkkvaelgeeLsvEeRnLlsvaYK re+l+++a+LaeqaEry++m++amk+v+el+e Ls+E+RnLlsvaYK Rabbit4Lib 4 REQLLQRARLAEQAERYDDMASAMKAVTELNEPLSNEDRNLLSVAYK 50 nvvGarRasWRiissiEqKeeskgnekkvelikeYRekvEkeLskicddv nvvGarR+sWR+issiEqK++++gnekk+e++k+YRek+EkeL+++c+dv Rabbit4Lib 51 NVVGARRSSWRVISSIEQKTMADGNEKKLEKVKAYREKIEKELETVCNDV 100 LklldkhLipka..ttaeskvFylKmkGDYyRYlaEfatgeerkeaadks L+lldk+Li+++++ + eskvFylKmkGDYyRYlaE+a+ge++++++++s Rabbit4Lib 101 LALLDKFLIKNCndFQYESKVFYLKMKGDYYRYLAEVASGEKKNSVVEAS 150 leaYkeAsdiakaelaPthPiRLGLALnFsvFyyeilnspdkAcqLAKqa ++aYkeA++i+k++++PthPiRLGLALnFsvFyyei+n+p++Ac LAKqa Rabbit4Lib 151 EAAYKEAFEISKEHMQPTHPIRLGLALNFSVFYYEIQNAPEQACLLAKQA 200 FdeAiaeLdtlsEesYKdstLimqLLRDnLtLWtsdaqdee<-* Fd+AiaeLdtl+E+sYKdstLimqLLRDnLtLWtsd+qde+ Rabbit4Lib 201 FDDAIAELDTLNEDSYKDSTLIMQLLRDNLTLWTSDQQDED 241 // Query: Rabbit4Lib.185.C2 855 1 560 nseq=3; minus strand; translated Scores for sequence family classification (score includes all domains): Model Description Score E-value N -------- ----------- ----- ------- --- 14-3-3 14-3-3 protein 205.4 8.4e-58 1 Parsed for domains: Model Domain seq-f seq-t hmm-f hmm-t score E-value -------- ------- ----- ----- ----- ----- ----- ------- 14-3-3 1/1 1 155 [. 1 236 [] 205.4 8.4e-58 Alignments of top-scoring domains: 14-3-3: domain 1 of 1, from 1 to 155: score 205.4, E = 8.4e-58 *->reelvylakLaeqaEryeemveamkkvaelgeeLsvEeRnLlsvaYK Rabbit4Lib - ----------------------------------------------- - nvvGarRasWRiissiEqKeeskgnekkvelikeYRekvEkeLskicddv +v keL+++c+dv Rabbit4Lib 1 ------------------------------------PRVRKELETVCNDV 14 LklldkhLipka..ttaeskvFylKmkGDYyRYlaEfatgeerkeaadks L+lldk+Li+++++ + eskvFylKmkGDYyRYlaE+a+ge++++++++s Rabbit4Lib 15 LALLDKFLIKNCndFQYESKVFYLKMKGDYYRYLAEVASGEKKNSVVEAS 64 leaYkeAsdiakaelaPthPiRLGLALnFsvFyyeilnspdkAcqLAKqa ++aYkeA++i+k++++PthPiRLGLALnFsvFyyei+n+p++Ac LAKqa Rabbit4Lib 65 EAAYKEAFEISKEHMQPTHPIRLGLALNFSVFYYEIQNAPEQACLLAKQA 114 FdeAiaeLdtlsEesYKdstLimqLLRDnLtLWtsdaqdee<-* d+AiaeLdtl+E+sYKdstLimqLLRDnLtLWtsd+qde+ Rabbit4Lib 115 CDDAIAELDTLNEDSYKDSTLIMQLLRDNLTLWTSDQQDED 155 // Query: Rabbit4Lib.185.C3 583 1 417 nseq=5; minus strand; translated Scores for sequence family classification (score includes all domains): Model Description Score E-value N -------- ----------- ----- ------- --- 14-3-3 14-3-3 protein 47.8 2.3e-10 1 Parsed for domains: Model Domain seq-f seq-t hmm-f hmm-t score E-value -------- ------- ----- ----- ----- ----- ----- ------- 14-3-3 1/1 4 107 .. 1 236 [] 47.8 2.3e-10 Alignments of top-scoring domains: 14-3-3: domain 1 of 1, from 4 to 107: score 47.8, E = 2.3e-10 *->reelvylakLaeqaEryeemveamkkvaelgeeLsvEeRnLlsvaYK Rabbit4Lib - ----------------------------------------------- - nvvGarRasWRiissiEqKeeskgnekkvelikeYRekvEkeLskicddv Rabbit4Lib - -------------------------------------------------- - LklldkhLipkattaeskvFylKmkGDYyRYlaEfatgeerkeaadksle ++ge++++++++s++ Rabbit4Lib 4 -----------------------------------SAGEKKNSVVEASEA 18 aYkeAsdiakaelaPthPiRLGLALnFsvFyyeilnspdkAcqLAKqaFd aYkeA++i+k++++PthPiRLGLALnFsvFyyei+n+p++Ac LAKqaFd Rabbit4Lib 19 AYKEAFEISKEHMQPTHPIRLGLALNFSVFYYEIQNAPEQACLLAKQAFD 68 eAiaeLdtlsEesYKdstLimqLLRDnLtLWtsdaqdee<-* +AiaeLdtl+E+sYKdstLimqLLRDnLtLWtsd+qde+ Rabbit4Lib 69 DAIAELDTLNEDSYKDSTLIMQLLRDNLTLWTSDQQDED 107 // Query: Rabbit4Lib.186.C1 183 242 343 nseq=10; translated Scores for sequence family classification (score includes all domains): Model Description Score E-value N -------- ----------- ----- ------- --- [no hits above thresholds] Parsed for domains: Model Domain seq-f seq-t hmm-f hmm-t score E-value -------- ------- ----- ----- ----- ----- ----- ------- [no hits above thresholds] Alignments of top-scoring domains: [no hits above thresholds] // Query: Rabbit4Lib.186.C2 731 34 785 nseq=5; minus strand; translated Scores for sequence family classification (score includes all domains): Model Description Score E-value N -------- ----------- ----- ------- --- Cyclin_N Cyclin, N-terminal domain 89.1 8.6e-23 1 Parsed for domains: Model Domain seq-f seq-t hmm-f hmm-t score E-value -------- ------- ----- ----- ----- ----- ----- ------- Cyclin_N 1/1 15 150 .. 1 146 [] 89.1 8.6e-23 Alignments of top-scoring domains: Cyclin_N: domain 1 of 1, from 15 to 150: score 89.1, E = 8.6e-23 *->diyaylrelEeeflplpppdyldqqpqpdsiditp.kMRaiLvDWLv ++ l+e+E +++p++ l + + + +M a L D+ v Rabbit4Lib 15 HQLNTLLEQESRCQPKVCGLRLIESA-----HDNGlRMTARLRDFEV 56 e....VhekfkLspeTLyLavnylDRFLskkpvpklkvkrkklQLvgvtc ++ ++ + f++ +eT+ Lavn+lDRFLsk+ v++k+l +vg++c Rabbit4Lib 57 KdllsLTQFFGFDTETFSLAVNLLDRFLSKM-K----VQPKHLGCVGLSC 101 lliAsK.yEEiksdvypPsvkdfvyitasDnqaytkkeilrMEkliLktL +++A K++EE ++P+ d++ i+ + +t+ ++ rMEk++L++ Rabbit4Lib 102 FYLAVKsIEEER---NVPLATDLIRIS--QY-RFTVSDLMRMEKIVLEKV 145 kfdls<-* +++ Rabbit4Lib 146 CWKVK 150 // Query: Rabbit4Lib.186.C5 411 218 776 nseq=2; minus strand; translated Scores for sequence family classification (score includes all domains): Model Description Score E-value N -------- ----------- ----- ------- --- Cyclin_N Cyclin, N-terminal domain 78.8 1.1e-19 1 Parsed for domains: Model Domain seq-f seq-t hmm-f hmm-t score E-value -------- ------- ----- ----- ----- ----- ----- ------- Cyclin_N 1/1 15 150 .. 1 146 [] 78.8 1.1e-19 Alignments of top-scoring domains: Cyclin_N: domain 1 of 1, from 15 to 150: score 78.8, E = 1.1e-19 *->diyaylrelEeeflplpppdyldqqpqpdsiditp.kMRaiLvDWLv ++ l+e+E +++p++ l + + + +M a L D+ v Rabbit4Lib 15 HQLNTLLEQESRCQPKVCGLRLIESA-----HDNGlRMTARLRDFEV 56 e....VhekfkLspeTLyLavnylDRFLskkpvpklkvkrkklQLvgvtc ++ ++ + f++ +eT+ Lavn+lDRFLsk+ v++k+l +vg++c Rabbit4Lib 57 KdllsLTQFFGFDTETFSLAVNLLDRFLSKM-K----VQPKHLGCVGLSC 101 lliAsK.yEEiksdvypPsvkdfvyitasDnqaytkkeilrMEkliLktL +++A K++EE ++P+ d++ i+ + +t+ ++ rMEk++L++ Rabbit4Lib 102 FYLAVKsIEEER---NVPLATDLIRIS--QY-RFTVSDLMRMEKIVLEKV 145 kfdls<-* ++ Rabbit4Lib 146 VGKVK 150 // Query: Rabbit4Lib.188.C1 1181 101 631 nseq=3; minus strand; translated Scores for sequence family classification (score includes all domains): Model Description Score E-value N -------- ----------- ----- ------- --- Ribosomal_60s 60s Acidic ribosomal protein 9.9 0.0072 1 Parsed for domains: Model Domain seq-f seq-t hmm-f hmm-t score E-value -------- ------- ----- ----- ----- ----- ----- ------- Ribosomal_60s 1/1 97 175 .. 1 94 [] 9.9 0.0072 Alignments of top-scoring domains: Ribosomal_60s: domain 1 of 1, from 97 to 175: score 9.9, E = 0.0072 *->eitaadikailkaA.gvn...vdavrvkllaaalegkdikeliangs + a ++ +l + +g++++ + r +l++a + ++ ++ Rabbit4Lib 97 NTIAFRHLFLLGYSdGADdtfAAYTREQLYQAIFY--AVDQYL---- 137 akgvavpaaaAaAaaAaAaaAAagAaaaaEEkKeEeeEeEEsDDDMGFGL ++ +v+ + + Aa+A++++ E+K+Ee E EsDDDMGFGL Rabbit4Lib 138 -MLPDVSLGRY----------AAPAEEKKVEAKKEESE--ESDDDMGFGL 174 F<-* F Rabbit4Lib 175 F 175 // Query: Rabbit4Lib.189.C1 136 778 901 nseq=2; minus strand; translated Scores for sequence family classification (score includes all domains): Model Description Score E-value N -------- ----------- ----- ------- --- [no hits above thresholds] Parsed for domains: Model Domain seq-f seq-t hmm-f hmm-t score E-value -------- ------- ----- ----- ----- ----- ----- ------- [no hits above thresholds] Alignments of top-scoring domains: [no hits above thresholds] // Query: Rabbit4Lib.190.C1 623 1 503 nseq=3; minus strand; translated Scores for sequence family classification (score includes all domains): Model Description Score E-value N -------- ----------- ----- ------- --- PH PH domain 83.2 5.2e-21 1 Parsed for domains: Model Domain seq-f seq-t hmm-f hmm-t score E-value -------- ------- ----- ----- ----- ----- ----- ------- PH 1/1 2 111 .. 1 92 [] 83.2 5.2e-21 Alignments of top-scoring domains: PH: domain 1 of 1, from 2 to 111: score 83.2, E = 5.2e-21 *->vikeGwLlkkg.........gkkswkkRyfvLfndvLlyykdkk... eG+L +k++ + ++++ + +sw+ +y+v+ n + +ykd k+ Rabbit4Lib 2 TRPEGFLNRKHeweahnkkaSSRSWHNVYCVINNQEMGFYKDAKtaa 48 ....kkpkgsipLsgiqvekvpdn.krkncFeirt.dretlllqaeseee ++ ++ ++L+++ +e + d++k+k++F++r +d++++l+qa+++ee Rabbit4Lib 49 sgipYHSEVPVSLKEALCEVALDYkKKKHVFKLRLnDGNEYLFQAKDDEE 98 rkeWvkaiqsair<-* +++W++ai+sai+ Rabbit4Lib 99 MNTWIQAISSAIS 111 // Query: Rabbit4Lib.193.C1 306 257 700 nseq=2; translated Scores for sequence family classification (score includes all domains): Model Description Score E-value N -------- ----------- ----- ------- --- [no hits above thresholds] Parsed for domains: Model Domain seq-f seq-t hmm-f hmm-t score E-value -------- ------- ----- ----- ----- ----- ----- ------- [no hits above thresholds] Alignments of top-scoring domains: [no hits above thresholds] // Query: Rabbit4Lib.196.C1 296 1 246 nseq=2; minus strand; translated Scores for sequence family classification (score includes all domains): Model Description Score E-value N -------- ----------- ----- ------- --- Metallothio Metallothionein 61.2 2.3e-14 1 Parsed for domains: Model Domain seq-f seq-t hmm-f hmm-t score E-value -------- ------- ----- ----- ----- ----- ----- ------- Metallothio 1/1 12 67 .. 1 67 [] 61.2 2.3e-14 Alignments of top-scoring domains: Metallothio: domain 1 of 1, from 12 to 67: score 61.2, E = 2.3e-14 *->mDPccCnCaeggtCsCgtsCkCtnCkCtsCkKcccsCccsgcKVvek mDP +C+Ca+g++C+C+ sCkC++CkCtsCkK+ccsCc++gc +k Rabbit4Lib 12 MDP-NCSCATGNSCTCASSCKCKECKCTSCKKSCCSCCPAGC---TK 54 CakgCvCkgctgpdkCsCcs<-* Ca+gC+Ckg+++ + Rabbit4Lib 55 CAQGCICKGASD-------K 67 // Query: Rabbit4Lib.196.C2 308 63 280 nseq=2; minus strand; translated Scores for sequence family classification (score includes all domains): Model Description Score E-value N -------- ----------- ----- ------- --- Metallothio Metallothionein 55.1 1.5e-12 1 Parsed for domains: Model Domain seq-f seq-t hmm-f hmm-t score E-value -------- ------- ----- ----- ----- ----- ----- ------- Metallothio 1/1 1 57 [. 1 67 [] 55.1 1.5e-12 Alignments of top-scoring domains: Metallothio: domain 1 of 1, from 1 to 57: score 55.1, E = 1.5e-12 *->mDPccCnCae.ggtCsCgtsCkCtnCkCtsCkKcccsCccsgcKVve mDP +C+Ca+ g++C+C++sC+C+ CkCtsCkK+ccsCc++gc + Rabbit4Lib 1 MDP-NCSCAAaGDSCTCANSCTCKACKCTSCKKSCCSCCPPGC---A 43 kCakgCvCkgctgpdkCsCcs<-* kCa+gC+Ck g + Rabbit4Lib 44 KCAQGCICKXGIG-------Q 57 // Query: Rabbit4Lib.197.C1 783 1 1146 nseq=3; minus strand; translated Scores for sequence family classification (score includes all domains): Model Description Score E-value N -------- ----------- ----- ------- --- KE2 KE2 family protein 2.2 0.39 1 Prefoldin Prefoldin subunit -24.7 8.8 1 Parsed for domains: Model Domain seq-f seq-t hmm-f hmm-t score E-value -------- ------- ----- ----- ----- ----- ----- ------- KE2 1/1 43 133 .. 1 106 [] 2.2 0.39 Prefoldin 1/1 28 141 .. 1 122 [] -24.7 8.8 Alignments of top-scoring domains: KE2: domain 1 of 1, from 43 to 133: score 2.2, E = 0.39 *->QelinkfqqLqqqleklaeqikqletqlkEielvleELelldedtkv +el+++ + q+++l++++ q + l+ ++ +EL+ ++ t + Rabbit4Lib 43 EELAEEVLADKRQIVDLDTKRNQNREGLRALQ---KELSGSEDVTVC 86 YklvGgvLVkqdkeevkeeLeerketlekeiktLekqleklekeleelke + G +++k++ + +ke++e++++ l+kei +L+++ + + +l e Rabbit4Lib 87 F---GSMFIKMPHPQTKEMIEKDQDHLDKEIDKLRNNXKVKVNRLFE--- 130 elqkllgsa<-* ++ Rabbit4Lib 131 ------AQG 133 Prefoldin: domain 1 of 1, from 28 to 141: score -24.7, E = 8.8 *->lkqeiesLqaelaaLreaieeleksletlktlkkkeedegkevlvpl l e+e + + l +++e+ ee+ + + + +l++ +++++e l Rabbit4Lib 28 LSPEAERVLQYLVEVEELAEEVLADKRQIVDLDT-KRNQNREGLR-- 71 gaglfvkaevkdtdkvlVdlGagyyvEksleeAieildkrieelekqlek ++ e+ ++v+V G+ ++++ +e ++k ++l+k ++k Rabbit4Lib 72 ----ALQKELSGSEDVTVCFGS-MFIKMPHPQTKEMIEKDQDHLDKEIDK 116 leeelekLrdqittleanlqqvqqk<-* l ++ + + +++ +++ + ++ + Rabbit4Lib 117 LRNNXKVKVNRLFEAQGIGCGAGVG 141 // Query: Rabbit4Lib.199.C1 384 1 392 nseq=2; minus strand; translated Scores for sequence family classification (score includes all domains): Model Description Score E-value N -------- ----------- ----- ------- --- UMPH-1 Pyrimidine 5'-nucleotidase (UMPH-1) 144.1 2.4e-39 1 Parsed for domains: Model Domain seq-f seq-t hmm-f hmm-t score E-value -------- ------- ----- ----- ----- ----- ----- ------- UMPH-1 1/1 4 130 .] 1 253 [] 144.1 2.4e-39 Alignments of top-scoring domains: UMPH-1: domain 1 of 1, from 4 to 130: score 144.1, E = 2.4e-39 *->yTLSRFaTynqGeRcPssHgIfDDNckllkeecrkklvdLkhkYYPI T Rabbit4Lib 4 -------TRP------------------------------------- 6 EiDPhlTieEKvPyMveWWtKSHsLlveqkfdKseIeqiVskStimLkdG Rabbit4Lib - -------------------------------------------------- - yeeFFeaLqqhnIPlfIFSAGIGnilEevlRQKagVlHpNvkvVSNfmdF v+RQ agV+HpNvkvVSNfmdF Rabbit4Lib 7 ----------------------------VIRQ-AGVYHPNVKVVSNFMDF 27 dEDGlLkGFkgpLIHTFNKNssVlenessYFddlkdrvNIILLGDSiGDl d +G+LkGFkg+LIH+FNK++++l+n ++YF++lkd++NIILLGDS+GDl Rabbit4Lib 28 DDNGMLKGFKGELIHVFNKHDGALKN-TEYFSQLKDNSNIILLGDSQGDL 76 dMAdGVpavehILKIGyLNDkVdetAAlekYmDsYDIVLvkDeTLdVvnk +MAdGV++vehILKIGyLND+Vde+ lekYmDsYDIVLvk+e+L+ +n+ Rabbit4Lib 77 RMADGVANVEHILKIGYLNDRVDEL--LEKYMDSYDIVLVKEESLELANS 124 lLslIl<-* +L++Il Rabbit4Lib 125 ILQKIL 130 // Query: Rabbit4Lib.203.C1 424 482 942 nseq=2; minus strand; translated Scores for sequence family classification (score includes all domains): Model Description Score E-value N -------- ----------- ----- ------- --- [no hits above thresholds] Parsed for domains: Model Domain seq-f seq-t hmm-f hmm-t score E-value -------- ------- ----- ----- ----- ----- ----- ------- [no hits above thresholds] Alignments of top-scoring domains: [no hits above thresholds] // Query: Rabbit4Lib.206.C1 1104 1 503 nseq=2; minus strand; translated Scores for sequence family classification (score includes all domains): Model Description Score E-value N -------- ----------- ----- ------- --- TGS TGS domain 138.0 1.7e-37 1 Parsed for domains: Model Domain seq-f seq-t hmm-f hmm-t score E-value -------- ------- ----- ----- ----- ----- ----- ------- TGS 1/1 89 166 .. 1 77 [] 138.0 1.7e-37 Alignments of top-scoring domains: TGS: domain 1 of 1, from 89 to 166: score 138.0, E = 1.7e-37 *->fldlirvytKPdGkvpdf.dPlilpkGsTTpeDfAyaIHtdlgkkfi +l l +ytK+ G++pdf+d++il+kG++ +e+++++IH++l+ +f+ Rabbit4Lib 89 YLALTCIYTKKRGQRPDFtDAIILRKGAS-VEHVCHRIHRSLASQFK 134 gAkVnGkSvKh.pqrVgLdhvLedgDvVeIvt<-* +A+V+G+S+K++pqrVgL+h+ e++Dv++Iv+ Rabbit4Lib 135 YALVWGTSTKYsPQRVGLSHTVEHEDVIQIVK 166 // Query: Rabbit4Lib.208.C1 793 1 474 nseq=3; minus strand; translated Scores for sequence family classification (score includes all domains): Model Description Score E-value N -------- ----------- ----- ------- --- Enolase_C Enolase, C-terminal TIM barrel domain 189.0 7.3e-53 1 Parsed for domains: Model Domain seq-f seq-t hmm-f hmm-t score E-value -------- ------- ----- ----- ----- ----- ----- ------- Enolase_C 1/1 2 155 .. 1 298 [] 189.0 7.3e-53 Alignments of top-scoring domains: Enolase_C: domain 1 of 1, from 2 to 155: score 189.0, E = 7.3e-53 *->kvvLPVPamNviNGGsHAgnklamQEFMIlPtGAssfkEAlrmGsev Rabbit4Lib - ----------------------------------------------- - YhnLksvikakyGqdatnVGDEGGfAPniqsnkeALdliveAIekAGYkg + ++ Rabbit4Lib 2 ----------RV------------------------------------RP 5 GekvkiamDvAsSEFYkkkdgkYdLdfknpksdpskkltseeLadlYkel + Rabbit4Lib 6 ------------------R------------------------------- 6 vkkYPIvSIEDpfdedDweawkklteelgdkiQiVGDDLtVTNpkrikka v++YP+vSIEDpfd+dDweaw+k+t++ g iQ+VGDDLtVTNpkri+ka Rabbit4Lib 7 VRDYPVVSIEDPFDQDDWEAWQKFTASAG--IQVVGDDLTVTNPKRIAKA 54 IekkaaNaLLlKvNQIGsvtEslaAvkmakkaGwgvmvSHRSGETeDtfI +++k +N+LLlKvNQIGsvtEsl+A+k+a+++GwgvmvSHRSGETeDtfI Rabbit4Lib 55 VDQKSCNCLLLKVNQIGSVTESLQACKLAQSNGWGVMVSHRSGETEDTFI 104 ADLvVGlsaGQIKTGApcRSeRlAKYNqLLRIEEeLGskAkYaGknfrkp ADLvVGl++GQIKTGApcRSeRlAKYNqLLRIEEeLGskAk+aG+nfr+p Rabbit4Lib 105 ADLVVGLCTGQIKTGAPCRSERLAKYNQLLRIEEELGSKAKFAGRNFRNP 154 q<-* + Rabbit4Lib 155 L 155 // Query: Rabbit4Lib.208.C3 2358 77 1405 nseq=23; minus strand; translated Scores for sequence family classification (score includes all domains): Model Description Score E-value N -------- ----------- ----- ------- --- Enolase_C Enolase, C-terminal TIM barrel domain 678.3 3.9e-200 1 Enolase_N Enolase, N-terminal domain 266.2 4.2e-76 1 Parsed for domains: Model Domain seq-f seq-t hmm-f hmm-t score E-value -------- ------- ----- ----- ----- ----- ----- ------- Enolase_N 1/1 10 142 .. 1 133 [] 266.2 4.2e-76 Enolase_C 1/1 150 440 .. 1 298 [] 678.3 3.9e-200 Alignments of top-scoring domains: Enolase_N: domain 1 of 1, from 10 to 142: score 266.2, E = 4.2e-76 *->aivkihaRqilDsRGnPtvEvdlttekGlfraavPsGAstGvhEAlE ++ k+haR+i+DsRGnPtvEvdl+t+kGlfraavPsGAstG++EAlE Rabbit4Lib 10 SVLKVHAREIFDSRGNPTVEVDLYTSKGLFRAAVPSGASTGIYEALE 56 lRDgdkskylgKgvlkAvenvneiiapalikknldvkdqkaiDellikLD lRD+dk++y+gKgv+kAve++n++i+ +k+l+v++q++iD+l+i++D Rabbit4Lib 57 LRDNDKTRYMGKGVSKAVEHINKTIGLPWXSKKLNVVEQEKIDKLMIEMD 106 GtenKsklGAnAiLgvslAvakAaAaekkvPLYkhi<-* GtenKsk+GAnAiLgvslAv+kA+A ek+vPLY+hi Rabbit4Lib 107 GTENKSKFGANAILGVSLAVCKAGAVEKGVPLYRHI 142 Enolase_C: domain 1 of 1, from 150 to 440: score 678.3, E = 3.9e-200 *->kvvLPVPamNviNGGsHAgnklamQEFMIlPtGAssfkEAlrmGsev +v+LPVPa+NviNGGsHAgnklamQEFMIlP GA sf+EA+r+G+ev Rabbit4Lib 150 EVILPVPAFNVINGGSHAGNKLAMQEFMILPIGAASFREAMRIGAEV 196 YhnLksvikakyGqdatnVGDEGGfAPniqsnkeALdliveAIekAGYkg YhnLk+vik+kyG+datnVG fAPni +nkeAL+l+++AI+kAGY++ Rabbit4Lib 197 YHNLKNVIKEKYGKDATNVGMKAXFAPNILENKEALELLKNAIAKAGYTD 246 GekvkiamDvAsSEFYkkkdgkYdLdfknpksdpskkltseeLadlYkel kv+i+mDvA+SEF+ + gkYdLdfk+p +d s+++t+++LadlYk++ Rabbit4Lib 247 --KVVIGMDVAASEFF--RSGKYDLDFKSP-DDASRYITPDQLADLYKSF 291 vkkYPIvSIEDpfdedDweawkklteelgdkiQiVGDDLtVTNpkrikka v++YP+vSIEDpfd+dDweaw+k+t++ g iQ+VGDDLtVTNpkri+ka Rabbit4Lib 292 VRDYPVVSIEDPFDQDDWEAWQKFTASAG--IQVVGDDLTVTNPKRIAKA 339 IekkaaNaLLlKvNQIGsvtEslaAvkmakkaGwgvmvSHRSGETeDtfI +++k +N+LLlKvNQIGsvtEsl+A+k+a+++Gwgvmv SGETeDtfI Rabbit4Lib 340 VDQKSCNCLLLKVNQIGSVTESLQACKLAQSNGWGVMVLIXSGETEDTFI 389 ADLvVGlsaGQIKTGApcRSeRlAKYNqLLRIEEeLGskAkYaGknfrkp ADLvVGl++GQIKTGApcRSeRlAKYNqLLRIEEeLGskAk+aG+nfr+p Rabbit4Lib 390 ADLVVGLCTGQIKTGAPCRSERLAKYNQLLRIEEELGSKAKFAGRNFRNP 439 q<-* + Rabbit4Lib 440 L 440 // Query: Rabbit4Lib.208.C4 1293 1 851 nseq=2; minus strand; translated Scores for sequence family classification (score includes all domains): Model Description Score E-value N -------- ----------- ----- ------- --- Enolase_C Enolase, C-terminal TIM barrel domain 315.2 7.5e-91 1 Enolase_N Enolase, N-terminal domain 1.6 0.21 1 Parsed for domains: Model Domain seq-f seq-t hmm-f hmm-t score E-value -------- ------- ----- ----- ----- ----- ----- ------- Enolase_N 1/1 1 60 [. 1 133 [] 1.6 0.21 Enolase_C 1/1 68 284 .] 1 298 [] 315.2 7.5e-91 Alignments of top-scoring domains: Enolase_N: domain 1 of 1, from 1 to 60: score 1.6, E = 0.21 *->aivkihaRqilDsRGnPtvEvdlttekGlfraavPsGAstGvhEAlE Rabbit4Lib - ----------------------------------------------- - lRDgdkskylgKgvlkAvenvneiiapalikknldvkdqkaiDellikLD + a ++ v++q++iD+l+i++D Rabbit4Lib 1 ------------------------XTHASAHA--SVVEQEKIDKLMIEMD 24 GtenKsklGAnAiLgvslAvakAaAaekkvPLYkhi<-* GtenKsk+GAnAiLgvslAv+kA+A ek+vPLY+hi Rabbit4Lib 25 GTENKSKFGANAILGVSLAVCKAGAVEKGVPLYRHI 60 Enolase_C: domain 1 of 1, from 68 to 284: score 315.2, E = 7.5e-91 *->kvvLPVPamNviNGGsHAgnklamQEFMIlPtGAssfkEAlrmGsev +v+LPVPa+NviNGGsHAgnklamQEFMIlP GA sf+EA+r+G+ev Rabbit4Lib 68 EVILPVPAFNVINGGSHAGNKLAMQEFMILPIGAASFREAMRIGAEV 114 YhnLksvikakyGqdatnVGDEGGfAPniqsnkeALdliveAIekAGYkg YhnLk+vik+kyG+datnVG fAPni +nkeAL+l+++AI+kAGY++ Rabbit4Lib 115 YHNLKNVIKEKYGKDATNVGMKAXFAPNILENKEALELLKNAIAKAGYTD 164 GekvkiamDvAsSEFYkkkdgkYdLdfknpksdpskkltseeLadlYkel kv+i+mDvA+SEF+ + gkYdLdfk+p +d s+++t+++LadlYk++ Rabbit4Lib 165 --KVVIGMDVAASEFF--RSGKYDLDFKSP-DDASRYITPDQLADLYKSF 209 vkkYPIvSIEDpfdedDweawkklteelgdkiQiVGDDLtVTNpkrikka v++YP+vSIEDpfd+dDweaw+k+t++ g iQ+VGDDLtVT p+ri+ a Rabbit4Lib 210 VRDYPVVSIEDPFDQDDWEAWQKFTASAG--IQVVGDDLTVTKPQRIAXA 257 IekkaaNaLL..lKvNQIGsvtEslaAvkmakkaGwgvmvSHRSGETeDt +++ a L++ vNQ svtEs aA+k+ Rabbit4Lib 258 VDQSPA---LppAQVNQNRSVTESPAACKL-------------------- 284 fIADLvVGlsaGQIKTGApcRSeRlAKYNqLLRIEEeLGskAkYaGknfr Rabbit4Lib - -------------------------------------------------- - kpq<-* Rabbit4Lib - --- - // Query: Rabbit4Lib.209.C1 243 1 130 nseq=2; minus strand; translated Scores for sequence family classification (score includes all domains): Model Description Score E-value N -------- ----------- ----- ------- --- [no hits above thresholds] Parsed for domains: Model Domain seq-f seq-t hmm-f hmm-t score E-value -------- ------- ----- ----- ----- ----- ----- ------- [no hits above thresholds] Alignments of top-scoring domains: [no hits above thresholds] // Query: Rabbit4Lib.211.C2 165 1238 1337 nseq=2; translated Scores for sequence family classification (score includes all domains): Model Description Score E-value N -------- ----------- ----- ------- --- [no hits above thresholds] Parsed for domains: Model Domain seq-f seq-t hmm-f hmm-t score E-value -------- ------- ----- ----- ----- ----- ----- ------- [no hits above thresholds] Alignments of top-scoring domains: [no hits above thresholds] // Query: Rabbit4Lib.214.C1 568 1 839 nseq=2; minus strand; translated Scores for sequence family classification (score includes all domains): Model Description Score E-value N -------- ----------- ----- ------- --- Peptidase_C12 Ubiquitin carboxyl-terminal hydrolase, 251.8 9.2e-72 1 Parsed for domains: Model Domain seq-f seq-t hmm-f hmm-t score E-value -------- ------- ----- ----- ----- ----- ----- ------- Peptidase_C12 1/1 1 161 [. 1 225 [] 251.8 9.2e-72 Alignments of top-scoring domains: Peptidase_C12: domain 1 of 1, from 1 to 161: score 251.8, E = 9.2e-72 *->rWlpLESnPgVfTelieklGvkgdEvqveDvysLddElLemiprPvh +rP Rabbit4Lib 1 -----------------------------------------XTRP-- 4 AlIFLFpwtekveekrkeepkgikvqdsdvsdsvFFaKQtIpNACGTqAL LF+w+ + eep+g++vqds + d++FFaKQ+I+NAC+TqA+ Rabbit4Lib 5 ----LFKWQPG------EEPAGSVVQDS-RLDTIFFAKQVINNACATQAI 43 LHaLlNnedeidvdlGstLkrFleftkdlsPeeRgkaLeNseeiraaHNS +++LlN++ ++dv+lG+tL++F+ef+++++ ++g+aL+Ns+ ir++HNS Rabbit4Lib 44 VSVLLNCT-HQDVHLGETLSEFKEFSQSFDAAMKGLALSNSDVIRQVHNS 92 faraqegqteekeaaGlSvrdedvnyHFIayVpinGtLYELDGrkegPin far+q++++++k++a +e++++HF++yVp+nG+LYELDG++egPi+ Rabbit4Lib 93 FARQQMFEFDAKTSA-----KEEDAFHFVSYVPVNGRLYELDGLREGPID 137 hGetsetaTdtllkDavrpVikermery<-* +G++++ ++++ avrpVi++r+++y Rabbit4Lib 138 LGACNQ----DDWISAVRPVIEKRIQKY 161 // Query: Rabbit4Lib.218.C1 128 1 65 nseq=2; translated Scores for sequence family classification (score includes all domains): Model Description Score E-value N -------- ----------- ----- ------- --- [no hits above thresholds] Parsed for domains: Model Domain seq-f seq-t hmm-f hmm-t score E-value -------- ------- ----- ----- ----- ----- ----- ------- [no hits above thresholds] Alignments of top-scoring domains: [no hits above thresholds] // Query: Rabbit4Lib.221.C1 241 282 682 nseq=2; minus strand; translated Scores for sequence family classification (score includes all domains): Model Description Score E-value N -------- ----------- ----- ------- --- [no hits above thresholds] Parsed for domains: Model Domain seq-f seq-t hmm-f hmm-t score E-value -------- ------- ----- ----- ----- ----- ----- ------- [no hits above thresholds] Alignments of top-scoring domains: [no hits above thresholds] // Query: Rabbit4Lib.222.C1 197 1 133 nseq=4; translated Scores for sequence family classification (score includes all domains): Model Description Score E-value N -------- ----------- ----- ------- --- [no hits above thresholds] Parsed for domains: Model Domain seq-f seq-t hmm-f hmm-t score E-value -------- ------- ----- ----- ----- ----- ----- ------- [no hits above thresholds] Alignments of top-scoring domains: [no hits above thresholds] // Query: Rabbit4Lib.223.C1 145 440 571 nseq=2; minus strand; translated Scores for sequence family classification (score includes all domains): Model Description Score E-value N -------- ----------- ----- ------- --- [no hits above thresholds] Parsed for domains: Model Domain seq-f seq-t hmm-f hmm-t score E-value -------- ------- ----- ----- ----- ----- ----- ------- [no hits above thresholds] Alignments of top-scoring domains: [no hits above thresholds] // Query: Rabbit4Lib.230.C1 1246 1 882 nseq=10; minus strand; translated Scores for sequence family classification (score includes all domains): Model Description Score E-value N -------- ----------- ----- ------- --- Tetraspannin Tetraspanin family 226.2 4.7e-64 1 IBV_3C IBV 3C protein -9.8 1.9 1 Parsed for domains: Model Domain seq-f seq-t hmm-f hmm-t score E-value -------- ------- ----- ----- ----- ----- ----- ------- IBV_3C 1/1 107 196 .. 1 93 [] -9.8 1.9 Tetraspannin 1/1 75 272 .. 1 291 [] 226.2 4.7e-64 Alignments of top-scoring domains: IBV_3C: domain 1 of 1, from 107 to 196: score -9.8, E = 1.9 *->mmnLLnKsLEEnGsvLtAlYiFvaFlAlYLLGRALqAFvqAADACC. + + n s+ t +Yi ++ Al +L L + C Rabbit4Lib 107 TKSIFEQDKNNNSSFYTGVYILIGAGALMMLVGFLGCCGAVQESQCm 153 ..LFWYtWlvvPGvKGtaFvYKytYGkKLnksELEavvvnEFPKnGWkq< +LF+ lv+ + ta ++ y + k v EF K +++ Rabbit4Lib 154 lgLFFSFLLVIFAIEITAAIWGYSHKDEVIKE------VQEFYKDTYNK 196 -* Rabbit4Lib - - Tetraspannin: domain 1 of 1, from 75 to 272: score 226.2, E = 4.7e-64 *->clKyllfllNflfwLlGilllgvGiWllvdkgsfssllgl..ssscf c+Kyllf +Nf+fwL+Gi++l++G+Wl++d ++ s++ + ++++s+f Rabbit4Lib 75 CIKYLLFGFNFVFWLAGIAVLAIGLWLRFDSQTKSIFEQDknNNSSF 121 laapyvlIlavGaviflvgflGccGAikEsrclLglYfifLlllfilela ++++y+lI ++Ga+++lvgflGccGA++Es+c+Lgl+f fLl++f++e++ Rabbit4Lib 122 YTGVYILI-GAGALMMLVGFLGCCGAVQESQCMLGLFFSFLLVIFAIEIT 170 agilafvfrdvkveselgetlkkalkkyydtddysawlqrVdkWeIRsCL a+i+++ ++d +v e++e++k++++k ++ d+++ Rabbit4Lib 171 AAIWGYSHKD-EVIKEVQEFYKDTYNKLKNKDEPQ--------------- 204 vdsvCnltadFFteawdalQsqfkCCGPPvnggf..yytDTlWfpqwssn +e++ a++ + CCG gg +++ +D Rabbit4Lib 205 ------------RETLKAIHYALDCCG--MAGGVeqFISD---------- 230 yfsgnsevdriknvdcklwrnvvlCydcsvanasgkteeesprpcevsnc Rabbit4Lib - -------------------------------------------------- - tccppssecc.qdapsniyteGCkekvleflrenlliiagvaigiaviq< c+++d + i ++C e+++e ++++ ++i++v+igiav++ Rabbit4Lib 231 -------ICPkKDILESIQVKSCPEAIKEVFDNKFHVIGAVGIGIAVVM 272 -* Rabbit4Lib - - // Query: Rabbit4Lib.231.C1 766 214 894 nseq=2; minus strand; translated Scores for sequence family classification (score includes all domains): Model Description Score E-value N -------- ----------- ----- ------- --- IF3_N Translation initiation factor IF-3, N-termin 71.6 1.7e-17 1 IF3_C Translation initiation factor IF-3, C-termin -0.7 0.0011 1 DUF968 Protein of unknown function (DUF968) -118.4 3.6 1 Parsed for domains: Model Domain seq-f seq-t hmm-f hmm-t score E-value -------- ------- ----- ----- ----- ----- ----- ------- IF3_N 1/1 21 95 .. 1 76 [] 71.6 1.7e-17 IF3_C 1/1 103 192 .. 1 88 [] -0.7 0.0011 DUF968 1/1 28 201 .. 1 259 [] -118.4 3.6 Alignments of top-scoring domains: IF3_N: domain 1 of 1, from 21 to 95: score 71.6, E = 1.7e-17 *->kkepriNeeIRareVRLIgenGeQlGivstreALelAeeagLDLVeI + + ++ ++I+ r +++ +e+G++lG ++++e ++l++e++L+LV++ Rabbit4Lib 21 TSFSNVGRKIKERIIHVLDEKGNDLGNMHRAEVIRLMDERDLRLVQR 67 spnAkPPVCKIMDYGKFkYEqkKKekEAK<-* + A+PP +++M+ G +++ ++ +++E+ Rabbit4Lib 68 DAHAEPPEYQLMT-GLQIHKERLRLREME 95 IF3_C: domain 1 of 1, from 103 to 192: score -0.7, E = 0.0011 *->viqvKEvKlrPkIdeHDydvKlkqarrFLedGdKVKVtirFRGR... i KE+ ++ +I++HD+d+K kq++ ++e+ + V +ti+ +G + + Rabbit4Lib 103 PILTKELTFSSNIGQHDLDTKNKQIQQWIEKKYQVQITIK-KGKnad 148 EiahpElGykvLdRvandlaDlaevEqaP..kmeGRnMimvLaPkk<-* E +++ ++++ +++ + +a+ ++P+ + G+ +++vL Rabbit4Lib 149 EPENKT--EELFNQILQTMPGIATFKSKPqaVKGGKAVMCVLRHLS 192 DUF968: domain 1 of 1, from 28 to 201: score -118.4, E = 3.6 *->MqkitaYitqddGtytvVifgdElgnketllldnGfkvelYvdvkva +ki+ + ++ +dE+gn l n + e +++ Rabbit4Lib 28 -RKIK---------ERIIHVLDEKGND----LGNMHRAEV---IRLM 57 DdrkitakQRrlIFALcnDIekHtYNDFEAtKPRSFGqardyvKqlFkla D+r +++ QR +H ++++y +l Rabbit4Lib 58 DERDLRLVQR----------DAHA-------------EPPEY-----QLM 79 yeveyeldkqISLsDcsksvArdANmLIeliidF...iFehdiPLsaktl ++ ++ L+ +k + + +++ + F+++i +hd L k + Rabbit4Lib 80 TG-LQIHKERLRLREMEKAQPKA-GPILTKELTFssnIGQHD--LDTKNK 125 dLLEpkedkryLYwatinRnCvIcGkpradLaHveHavGaGrnRnkmdHy + k+y + ti Gk ad e nk Rabbit4Lib 126 QI-QQWIEKKYQVQITIKK-----GK-NAD----E-------PENKTEEL 157 kkhVlALcReHHnEqHqIGvkaFkdKYHlhvdGIkvdeelnkeLGLNAAv + +l q G+ +Fk K + v G k ++ L Rabbit4Lib 158 FNQIL---------QTMPGIATFKSKPQ-AVKGGKAVMCVLRHL------ 191 tEkgErvkrflvkke<-* k+E+ ke Rabbit4Lib 192 SKKEEN-----TYKE 201 // Query: Rabbit4Lib.235.C1 638 1 567 nseq=3; minus strand; translated Scores for sequence family classification (score includes all domains): Model Description Score E-value N -------- ----------- ----- ------- --- BRICHOS BRICHOS domain 140.6 2.8e-38 1 Parsed for domains: Model Domain seq-f seq-t hmm-f hmm-t score E-value -------- ------- ----- ----- ----- ----- ----- ------- BRICHOS 1/1 58 152 .. 1 109 [] 140.6 2.8e-38 Alignments of top-scoring domains: BRICHOS: domain 1 of 1, from 58 to 152: score 140.6, E = 2.8e-38 *->fsgsdeaiivhDFkngltAikdasgekCyikkldktaipslealvel fs+sd+a i+hDF++g+tA++d+ +++Cy+++l++++++++++lvel Rabbit4Lib 58 FSDSDPAAIIHDFEKGMTAYLDLLLGNCYLMPLNTSIVMPPKNLVEL 104 lkniklggyipateyvPqsyliqeeksleyvvveerikkaDlsfLkGskI +++ ++g y+p t++v++++ v+ e+i+ D+s+L G++I Rabbit4Lib 105 FGKLASGKYLPHTYVVREDL-----------VAVEEIR--DVSNL-GIFI 140 lrlCrdvptYwl<-* ++lC++++ ++l Rabbit4Lib 141 YQLCNNRKSFRL 152 // Query: Rabbit4Lib.236.C1 260 1 252 nseq=2; minus strand; translated Scores for sequence family classification (score includes all domains): Model Description Score E-value N -------- ----------- ----- ------- --- [no hits above thresholds] Parsed for domains: Model Domain seq-f seq-t hmm-f hmm-t score E-value -------- ------- ----- ----- ----- ----- ----- ------- [no hits above thresholds] Alignments of top-scoring domains: [no hits above thresholds] // Query: Rabbit4Lib.237.C1 130 17 187 nseq=5; minus strand; translated Scores for sequence family classification (score includes all domains): Model Description Score E-value N -------- ----------- ----- ------- --- Ribosomal_S14 Ribosomal protein S14p/S29e 88.5 1.4e-22 1 Parsed for domains: Model Domain seq-f seq-t hmm-f hmm-t score E-value -------- ------- ----- ----- ----- ----- ----- ------- Ribosomal_S14 1/1 3 56 .] 1 57 [] 88.5 1.4e-22 Alignments of top-scoring domains: Ribosomal_S14: domain 1 of 1, from 3 to 56: score 88.5, E = 1.4e-22 *->fklqklphnssygrgsrrCrlcGrprgvirkfgLnlCRhcFRelAse ++ + +h++++g+gsr+Cr+c +++g+irk+gLn+CR+cFR++A++ Rabbit4Lib 3 HQQLYWSHPRKFGQGSRSCRVCSNRHGLIRKYGLNMCRQCFRQYAKD 49 GlLpGfkKys<-* +Gf K++ Rabbit4Lib 50 ---IGFIKLD 56 // Query: Rabbit4Lib.237.C2 130 34 204 nseq=7; minus strand; translated Scores for sequence family classification (score includes all domains): Model Description Score E-value N -------- ----------- ----- ------- --- Ribosomal_S14 Ribosomal protein S14p/S29e 88.5 1.4e-22 1 Parsed for domains: Model Domain seq-f seq-t hmm-f hmm-t score E-value -------- ------- ----- ----- ----- ----- ----- ------- Ribosomal_S14 1/1 3 56 .] 1 57 [] 88.5 1.4e-22 Alignments of top-scoring domains: Ribosomal_S14: domain 1 of 1, from 3 to 56: score 88.5, E = 1.4e-22 *->fklqklphnssygrgsrrCrlcGrprgvirkfgLnlCRhcFRelAse ++ + +h++++g+gsr+Cr+c +++g+irk+gLn+CR+cFR++A++ Rabbit4Lib 3 HQQLYWSHPRKFGQGSRSCRVCSNRHGLIRKYGLNMCRQCFRQYAKD 49 GlLpGfkKys<-* +Gf K++ Rabbit4Lib 50 ---IGFIKLD 56 // Query: Rabbit4Lib.237.C3 120 23 193 nseq=2; minus strand; translated Scores for sequence family classification (score includes all domains): Model Description Score E-value N -------- ----------- ----- ------- --- Ribosomal_S14 Ribosomal protein S14p/S29e 88.5 1.4e-22 1 Parsed for domains: Model Domain seq-f seq-t hmm-f hmm-t score E-value -------- ------- ----- ----- ----- ----- ----- ------- Ribosomal_S14 1/1 3 56 .] 1 57 [] 88.5 1.4e-22 Alignments of top-scoring domains: Ribosomal_S14: domain 1 of 1, from 3 to 56: score 88.5, E = 1.4e-22 *->fklqklphnssygrgsrrCrlcGrprgvirkfgLnlCRhcFRelAse ++ + +h++++g+gsr+Cr+c +++g+irk+gLn+CR+cFR++A++ Rabbit4Lib 3 HQQLYWSHPRKFGQGSRSCRVCSNRHGLIRKYGLNMCRQCFRQYAKD 49 GlLpGfkKys<-* +Gf K++ Rabbit4Lib 50 ---IGFIKLD 56 // Query: Rabbit4Lib.242.C1 331 36 446 nseq=2; minus strand; translated Scores for sequence family classification (score includes all domains): Model Description Score E-value N -------- ----------- ----- ------- --- Ribosomal_L27e Ribosomal L27e protein family 199.2 6.6e-56 1 KOW KOW motif 32.8 7.7e-06 1 Parsed for domains: Model Domain seq-f seq-t hmm-f hmm-t score E-value -------- ------- ----- ----- ----- ----- ----- ------- KOW 1/1 5 40 .. 1 40 [] 32.8 7.7e-06 Ribosomal_L27e 1/1 52 136 .] 1 86 [] 199.2 6.6e-56 Alignments of top-scoring domains: KOW: domain 1 of 1, from 5 to 40: score 32.8, E = 7.7e-06 *->fkkGdvVrVisGpfkGkkGkVvevdpkkGHGslknrVvve<-* +k+G+vV V++G++ G+k+++v+ +++ +++r + + Rabbit4Lib 5 MKPGKVVLVLAGRYSGRKAVIVKNIDDG----TSDRPYSH 40 Ribosomal_L27e: domain 1 of 1, from 52 to 136: score 199.2, E = 6.6e-56 *->KVTkkmGaKKiAKrSkvKpFIKvVNYnHLmPTRYtLDvdlkkKtvvn KVT++mG+KKi k+K+F+Kv+NYnHLmPTRY++D++l+ Ktvvn Rabbit4Lib 52 KVTAAMGKKKIXQAVKIKSFVKVYNYNHLMPTRYSVDIPLD-KTVVN 97 adalkapskKveArkevKkkfEERyKTGKNrWFFtKLRF<-* +d++++p++K++Ar+e+K+kfEERyKTGKN+WFF+KLRF Rabbit4Lib 98 KDVFRDPALKRKARREAKVKFEERYKTGKNKWFFQKLRF 136 // Query: Rabbit4Lib.242.C2 128 1 221 nseq=2; minus strand; translated Scores for sequence family classification (score includes all domains): Model Description Score E-value N -------- ----------- ----- ------- --- Ribosomal_L27e Ribosomal L27e protein family 154.2 2.3e-42 1 Parsed for domains: Model Domain seq-f seq-t hmm-f hmm-t score E-value -------- ------- ----- ----- ----- ----- ----- ------- Ribosomal_L27e 1/1 5 73 .] 1 86 [] 154.2 2.3e-42 Alignments of top-scoring domains: Ribosomal_L27e: domain 1 of 1, from 5 to 73: score 154.2, E = 2.3e-42 *->KVTkkmGaKKiAKrSkvKpFIKvVNYnHLmPTRYtLDvdlkkKtvvn +K+F+Kv+NYnHLmPTRY++D++l+ Ktvvn Rabbit4Lib 5 ----------------IKSFVKVYNYNHLMPTRYSVDIPLD-KTVVN 34 adalkapskKveArkevKkkfEERyKTGKNrWFFtKLRF<-* +d++++p++K++Ar+e+K+kfEERyKTGKN+WFF+KLRF Rabbit4Lib 35 KDVFRDPALKRKARREAKVKFEERYKTGKNKWFFQKLRF 73 // Query: Rabbit4Lib.243.C1 658 1 777 nseq=3; minus strand; translated Scores for sequence family classification (score includes all domains): Model Description Score E-value N -------- ----------- ----- ------- --- Rubredoxin Rubredoxin -11.4 8.2 1 Parsed for domains: Model Domain seq-f seq-t hmm-f hmm-t score E-value -------- ------- ----- ----- ----- ----- ----- ------- Rubredoxin 1/1 194 233 .. 1 49 [] -11.4 8.2 Alignments of top-scoring domains: Rubredoxin: domain 1 of 1, from 194 to 233: score -11.4, E = 8.2 *->makYvCkvCGYv....YDpaeGDpdngipPGTpFedLPdDW.vCPvC + +C++C +++YD +++ e + +W+vCP C Rabbit4Lib 194 DVHKKCPLCELMfppnYDQSKFE-----------EHVESHWkVCPMC 229 GapKdqF<-* +qF Rabbit4Lib 230 S---EQF 233 // Query: Rabbit4Lib.244.C1 268 1 286 nseq=2; translated Scores for sequence family classification (score includes all domains): Model Description Score E-value N -------- ----------- ----- ------- --- [no hits above thresholds] Parsed for domains: Model Domain seq-f seq-t hmm-f hmm-t score E-value -------- ------- ----- ----- ----- ----- ----- ------- [no hits above thresholds] Alignments of top-scoring domains: [no hits above thresholds] // Query: Rabbit4Lib.248.C1 284 665 1079 nseq=2; minus strand; translated Scores for sequence family classification (score includes all domains): Model Description Score E-value N -------- ----------- ----- ------- --- [no hits above thresholds] Parsed for domains: Model Domain seq-f seq-t hmm-f hmm-t score E-value -------- ------- ----- ----- ----- ----- ----- ------- [no hits above thresholds] Alignments of top-scoring domains: [no hits above thresholds] // Query: Rabbit4Lib.249.C1 210 176 420 nseq=2; translated Scores for sequence family classification (score includes all domains): Model Description Score E-value N -------- ----------- ----- ------- --- [no hits above thresholds] Parsed for domains: Model Domain seq-f seq-t hmm-f hmm-t score E-value -------- ------- ----- ----- ----- ----- ----- ------- [no hits above thresholds] Alignments of top-scoring domains: [no hits above thresholds] // Query: Rabbit4Lib.249.C2 887 80 598 nseq=4; minus strand; translated Scores for sequence family classification (score includes all domains): Model Description Score E-value N -------- ----------- ----- ------- --- efhand EF hand 58.7 1.2e-13 3 Parsed for domains: Model Domain seq-f seq-t hmm-f hmm-t score E-value -------- ------- ----- ----- ----- ----- ----- ------- efhand 1/3 33 61 .. 1 29 [] 36.8 4.9e-07 efhand 2/3 102 130 .. 1 29 [] 15.7 1.1 efhand 3/3 138 166 .. 1 29 [] 8.5 15 Alignments of top-scoring domains: efhand: domain 1 of 3, from 33 to 61: score 36.8, E = 4.9e-07 *->elkeaFkefDkDgDGkIsfeEfkaalkkl<-* e+keaF+++D+++DG+I++e++ ++l++l Rabbit4Lib 33 EFKEAFNMIDQNRDGFIDKEDLHDMLASL 61 efhand: domain 2 of 3, from 102 to 130: score 15.7, E = 1.1 *->elkeaFkefDkDgDGkIsfeEfkaalkkl<-* +++aF+ fD G+I + ++++l+++ Rabbit4Lib 102 VIRNAFACFDEEATGTIQEDYLRELLTTM 130 efhand: domain 3 of 3, from 138 to 166: score 8.5, E = 15 *->elkeaFkefDkDgDGkIsfeEfkaalkkl<-* e++e+ +e+ D+ G ++ Ef ++lk+ Rabbit4Lib 138 EVDELYREAPIDKKGNFNYIEFTRILKHG 166 // Query: Rabbit4Lib.249.C3 313 1 204 nseq=2; minus strand; translated Scores for sequence family classification (score includes all domains): Model Description Score E-value N -------- ----------- ----- ------- --- [no hits above thresholds] Parsed for domains: Model Domain seq-f seq-t hmm-f hmm-t score E-value -------- ------- ----- ----- ----- ----- ----- ------- [no hits above thresholds] Alignments of top-scoring domains: [no hits above thresholds] // Query: Rabbit4Lib.249.C4 450 1 239 nseq=2; minus strand; translated Scores for sequence family classification (score includes all domains): Model Description Score E-value N -------- ----------- ----- ------- --- efhand EF hand 24.2 0.003 2 Parsed for domains: Model Domain seq-f seq-t hmm-f hmm-t score E-value -------- ------- ----- ----- ----- ----- ----- ------- efhand 1/2 9 37 .. 1 29 [] 15.7 1.1 efhand 2/2 45 73 .. 1 29 [] 8.5 15 Alignments of top-scoring domains: efhand: domain 1 of 2, from 9 to 37: score 15.7, E = 1.1 *->elkeaFkefDkDgDGkIsfeEfkaalkkl<-* +++aF+ fD G+I + ++++l+++ Rabbit4Lib 9 VIRNAFACFDEEATGTIQEDYLRELLTTM 37 efhand: domain 2 of 2, from 45 to 73: score 8.5, E = 15 *->elkeaFkefDkDgDGkIsfeEfkaalkkl<-* e++e+ +e+ D+ G ++ Ef ++lk+ Rabbit4Lib 45 EVDELYREAPIDKKGNFNYIEFTRILKHG 73 // Query: Rabbit4Lib.249.C5 834 89 607 nseq=2; minus strand; translated Scores for sequence family classification (score includes all domains): Model Description Score E-value N -------- ----------- ----- ------- --- efhand EF hand 58.7 1.2e-13 3 Parsed for domains: Model Domain seq-f seq-t hmm-f hmm-t score E-value -------- ------- ----- ----- ----- ----- ----- ------- efhand 1/3 33 61 .. 1 29 [] 36.8 4.9e-07 efhand 2/3 102 130 .. 1 29 [] 15.7 1.1 efhand 3/3 138 166 .. 1 29 [] 8.5 15 Alignments of top-scoring domains: efhand: domain 1 of 3, from 33 to 61: score 36.8, E = 4.9e-07 *->elkeaFkefDkDgDGkIsfeEfkaalkkl<-* e+keaF+++D+++DG+I++e++ ++l++l Rabbit4Lib 33 EFKEAFNMIDQNRDGFIDKEDLHDMLASL 61 efhand: domain 2 of 3, from 102 to 130: score 15.7, E = 1.1 *->elkeaFkefDkDgDGkIsfeEfkaalkkl<-* +++aF+ fD G+I + ++++l+++ Rabbit4Lib 102 VIRNAFACFDEEATGTIQEDYLRELLTTM 130 efhand: domain 3 of 3, from 138 to 166: score 8.5, E = 15 *->elkeaFkefDkDgDGkIsfeEfkaalkkl<-* e++e+ +e+ D+ G ++ Ef ++lk+ Rabbit4Lib 138 EVDELYREAPIDKKGNFNYIEFTRILKHG 166 // Query: Rabbit4Lib.251.C1 711 1 499 nseq=2; translated Scores for sequence family classification (score includes all domains): Model Description Score E-value N -------- ----------- ----- ------- --- [no hits above thresholds] Parsed for domains: Model Domain seq-f seq-t hmm-f hmm-t score E-value -------- ------- ----- ----- ----- ----- ----- ------- [no hits above thresholds] Alignments of top-scoring domains: [no hits above thresholds] // Query: Rabbit4Lib.251.C2 773 73 511 nseq=25; translated Scores for sequence family classification (score includes all domains): Model Description Score E-value N -------- ----------- ----- ------- --- [no hits above thresholds] Parsed for domains: Model Domain seq-f seq-t hmm-f hmm-t score E-value -------- ------- ----- ----- ----- ----- ----- ------- [no hits above thresholds] Alignments of top-scoring domains: [no hits above thresholds] // Query: Rabbit4Lib.251.C4 569 1 433 nseq=2; minus strand; translated Scores for sequence family classification (score includes all domains): Model Description Score E-value N -------- ----------- ----- ------- --- [no hits above thresholds] Parsed for domains: Model Domain seq-f seq-t hmm-f hmm-t score E-value -------- ------- ----- ----- ----- ----- ----- ------- [no hits above thresholds] Alignments of top-scoring domains: [no hits above thresholds] // Query: Rabbit4Lib.251.C6 695 1 486 nseq=3; minus strand; translated Scores for sequence family classification (score includes all domains): Model Description Score E-value N -------- ----------- ----- ------- --- [no hits above thresholds] Parsed for domains: Model Domain seq-f seq-t hmm-f hmm-t score E-value -------- ------- ----- ----- ----- ----- ----- ------- [no hits above thresholds] Alignments of top-scoring domains: [no hits above thresholds] // Query: Rabbit4Lib.252.C1 441 1 458 nseq=2; minus strand; translated Scores for sequence family classification (score includes all domains): Model Description Score E-value N -------- ----------- ----- ------- --- NDUF_B12 NADH-ubiquinone oxidoreductase B12 subunit f 120.7 2.7e-32 1 Parsed for domains: Model Domain seq-f seq-t hmm-f hmm-t score E-value -------- ------- ----- ----- ----- ----- ----- ------- NDUF_B12 1/1 95 151 .. 1 60 [] 120.7 2.7e-32 Alignments of top-scoring domains: NDUF_B12: domain 1 of 1, from 95 to 151: score 120.7, E = 2.7e-32 *->LrDPWaRnEaWRYmvgqFskhnsfkdvFlfkGFkwGFaAFvvavavE LrDPW+RnEaWRYm g+F+ +sf + l kGFkwGFaAFvvav++E Rabbit4Lib 95 LRDPWGRNEAWRYM-GGFAHNVSFIGALL-KGFKWGFAAFVVAVGAE 139 qYaLkskkkeekH<-* Y+L+s++k++kH Rabbit4Lib 140 -YYLESQNKDKKH 151 // Query: Rabbit4Lib.252.C2 440 160 468 nseq=2; minus strand; translated Scores for sequence family classification (score includes all domains): Model Description Score E-value N -------- ----------- ----- ------- --- NDUF_B12 NADH-ubiquinone oxidoreductase B12 subunit f 120.7 2.7e-32 1 Parsed for domains: Model Domain seq-f seq-t hmm-f hmm-t score E-value -------- ------- ----- ----- ----- ----- ----- ------- NDUF_B12 1/1 45 101 .. 1 60 [] 120.7 2.7e-32 Alignments of top-scoring domains: NDUF_B12: domain 1 of 1, from 45 to 101: score 120.7, E = 2.7e-32 *->LrDPWaRnEaWRYmvgqFskhnsfkdvFlfkGFkwGFaAFvvavavE LrDPW+RnEaWRYm g+F+ +sf + l kGFkwGFaAFvvav++E Rabbit4Lib 45 LRDPWGRNEAWRYM-GGFAHNVSFIGALL-KGFKWGFAAFVVAVGAE 89 qYaLkskkkeekH<-* Y+L+s++k++kH Rabbit4Lib 90 -YYLESQNKDKKH 101 // Query: Rabbit4Lib.253.C1 126 1203 1483 nseq=2; translated Scores for sequence family classification (score includes all domains): Model Description Score E-value N -------- ----------- ----- ------- --- [no hits above thresholds] Parsed for domains: Model Domain seq-f seq-t hmm-f hmm-t score E-value -------- ------- ----- ----- ----- ----- ----- ------- [no hits above thresholds] Alignments of top-scoring domains: [no hits above thresholds] // Query: Rabbit4Lib.256.C1 1008 27 758 nseq=6; minus strand; translated Scores for sequence family classification (score includes all domains): Model Description Score E-value N -------- ----------- ----- ------- --- Ribosomal_S3_C Ribosomal protein S3, C-terminal domai 113.2 4.9e-30 1 KH_2 KH domain 31.7 1.8e-05 1 Parsed for domains: Model Domain seq-f seq-t hmm-f hmm-t score E-value -------- ------- ----- ----- ----- ----- ----- ------- KH_2 1/1 45 102 .. 1 78 [] 31.7 1.8e-05 Ribosomal_S3_C 1/1 104 188 .. 1 89 [] 113.2 4.9e-30 Alignments of top-scoring domains: KH_2: domain 1 of 1, from 45 to 102: score 31.7, E = 1.8e-05 *->avivvirtsqpGivIGKgGsnIkklgkelrkll.tg.kkvqieviEy +++++i + + v+G +G++I++l++ ++k+++++++ v + + Rabbit4Lib 45 RTEIIILATRTQNVLGEKGRRIRELTAVVQKRFgFPeGSVELYAEK- 90 SdeeFgkkVfLeLwVKVkknWvknpellaqLga<-* v ++l+a +a Rabbit4Lib 91 ---------------------VATRGLCAIAQA 102 Ribosomal_S3_C: domain 1 of 1, from 104 to 188: score 113.2, E = 4.9e-30 *->sianqLenrvsfRkamkkaierimkagklakGiKiqvSGRLnGsaei s++++L ++++R+a+++++++im++g akG++++vSG+L+G ++ Rabbit4Lib 104 SLRYKLLGGLAVRRACYGVLRFIMESG--AKGCEVVVSGKLRG--QR 146 ARtewyreGrvplqt.ePlrakIDYatkeahTkYGvlGVKVWI<-* A+++++ +G +++++++P++ ++D+a++++ +++GvlG+KV+I Rabbit4Lib 147 AKSMKFVDG-LMIHSgDPVNYYVDTAVRHVLLRQGVLGIKVKI 188 // Query: Rabbit4Lib.257.C1 257 85 358 nseq=2; minus strand; translated Scores for sequence family classification (score includes all domains): Model Description Score E-value N -------- ----------- ----- ------- --- SecE SecE/Sec61-gamma subunits of protein translo 92.9 6.4e-24 1 Parsed for domains: Model Domain seq-f seq-t hmm-f hmm-t score E-value -------- ------- ----- ----- ----- ----- ----- ------- SecE 1/1 10 66 .. 1 57 [] 92.9 6.4e-24 Alignments of top-scoring domains: SecE: domain 1 of 1, from 10 to 66: score 92.9, E = 6.4e-24 *->klrkFfrevraElrKVvWPtRkEltkytlvViifviimsliffvlDl + r+F+++++++++++++P+RkE++k++++++i+++im++i+f+++l Rabbit4Lib 10 PSRQFVKDSIRLVKRCTKPDRKEFQKIAMATAIGFAIMGFIGFFVKL 56 ifipiikliv<-* i+ipi+++iv Rabbit4Lib 57 IHIPINNIIV 66 // Query: Rabbit4Lib.258.C1 753 1 663 nseq=2; translated Scores for sequence family classification (score includes all domains): Model Description Score E-value N -------- ----------- ----- ------- --- [no hits above thresholds] Parsed for domains: Model Domain seq-f seq-t hmm-f hmm-t score E-value -------- ------- ----- ----- ----- ----- ----- ------- [no hits above thresholds] Alignments of top-scoring domains: [no hits above thresholds] // Query: Rabbit4Lib.258.C2 310 1 173 nseq=5; translated Scores for sequence family classification (score includes all domains): Model Description Score E-value N -------- ----------- ----- ------- --- [no hits above thresholds] Parsed for domains: Model Domain seq-f seq-t hmm-f hmm-t score E-value -------- ------- ----- ----- ----- ----- ----- ------- [no hits above thresholds] Alignments of top-scoring domains: [no hits above thresholds] // Query: Rabbit4Lib.260.C1 340 864 1065 nseq=3; minus strand; translated Scores for sequence family classification (score includes all domains): Model Description Score E-value N -------- ----------- ----- ------- --- [no hits above thresholds] Parsed for domains: Model Domain seq-f seq-t hmm-f hmm-t score E-value -------- ------- ----- ----- ----- ----- ----- ------- [no hits above thresholds] Alignments of top-scoring domains: [no hits above thresholds] // Query: Rabbit4Lib.261.C1 354 44 349 nseq=3; minus strand; translated Scores for sequence family classification (score includes all domains): Model Description Score E-value N -------- ----------- ----- ------- --- [no hits above thresholds] Parsed for domains: Model Domain seq-f seq-t hmm-f hmm-t score E-value -------- ------- ----- ----- ----- ----- ----- ------- [no hits above thresholds] Alignments of top-scoring domains: [no hits above thresholds] // Query: Rabbit4Lib.265.C1 160 1187 1342 nseq=4; minus strand; translated Scores for sequence family classification (score includes all domains): Model Description Score E-value N -------- ----------- ----- ------- --- [no hits above thresholds] Parsed for domains: Model Domain seq-f seq-t hmm-f hmm-t score E-value -------- ------- ----- ----- ----- ----- ----- ------- [no hits above thresholds] Alignments of top-scoring domains: [no hits above thresholds] // Query: Rabbit4Lib.270.C1 1065 66 900 nseq=3; minus strand; translated Scores for sequence family classification (score includes all domains): Model Description Score E-value N -------- ----------- ----- ------- --- Esterase Putative esterase 345.9 4.5e-100 1 Peptidase_S9 Prolyl oligopeptidase family -67.4 0.046 1 Parsed for domains: Model Domain seq-f seq-t hmm-f hmm-t score E-value -------- ------- ----- ----- ----- ----- ----- ------- Peptidase_S9 1/1 70 270 .. 1 229 [] -67.4 0.046 Esterase 1/1 15 273 .. 1 307 [] 345.9 4.5e-100 Alignments of top-scoring domains: Peptidase_S9: domain 1 of 1, from 70 to 270: score -67.4, E = 0.046 *->psfsvwnlqlla...............drGyvvavaniRGsggyGra ++ + l + a+++++++ + +++++++++ + G g+y +a Rabbit4Lib 70 AASE-HGLIVIApdtsprgcnikgeddSWDF------GTGAGFYVDA 109 whdagkrdlgqnefdDfiaaaeyL....ieqgpyvDpdrlaiwGgSyGGy +d +k ++ ++++ ++e+L++ +++p vDp+r i+G+S GG+ Rabbit4Lib 110 TEDPWKTNYRMYSY-----VTEELpqlvNANFP-VDPQRTSIFGHSMGGH 153 ltgaalnkqrpdlFkaavavvpvvDwltymsdtslpysfteaeymewgnp ++ + + p ++k + a +p+ + + f+e +++ ++ Rabbit4Lib 154 GALICTL-KNPGKYKSVSAFAPICNPMLCVWSKKA---FGE--FLG-PDQ 196 wdeneegYrylspyspydnvkaqaypplLlihGlhDdRVpyqealklvaa + +++ Y++ + y +L+ +G +D ++ ++aa Rabbit4Lib 197 NK-WKA-YDATHLVKSYTG----SQLDILIDQGKADEFYDQLLPENFIAA 240 LqalktGknpflllifpdeGHdLSgggkprnkrlkeyarllaFllkvlgg ++ ++ + ++ + +H + + F++ + + Rabbit4Lib 241 CT--EKKIP-VVFRLQEGYDH-----------G-------YYFIATFIAV 269 t<-* t Rabbit4Lib 270 T 270 Esterase: domain 1 of 1, from 15 to 273: score 345.9, E = 4.5e-100 *->pleylrhnSealgrerkvqvyLPpdYyappgrkyPvlylLDGLrAqd ++++ h+S +l++++k++vyLPp+ ++ +k+Pvly+L+GL Rabbit4Lib 15 FQKVFEHDSVELKCKMKFAVYLPPK---AESAKCPVLYFLSGL---- 54 datgwfqngpakealerlaaegeippviivgiPaGdessf.ysdwdlgqG t+++qn+++k++++++a+e+++++++++++P+G++ + ++++wd+g+G Rabbit4Lib 55 --TCTEQNFITKSGFQQAASEHGLIVIAPDTSPRGCNIKGeDDSWDFGTG 102 arfylnapegpgayayeMYtfltqELlPlldanfptapdgdrravaGqSm a+fy++a+e p++++y+MY+++t+EL++l++anfp++p++ ++++G+Sm Rabbit4Lib 103 AGFYVDATEDPWKTNYRMYSYVTEELPQLVNANFPVDPQR--TSIFGHSM 150 GGlgALylALkyPdrFgsVssfSPivnPssafgpvaIgaaLsdAGGydan GG+gAL++ Lk+P++++sVs+f+Pi+nP Rabbit4Lib 151 GGHGALICTLKNPGKYKSVSAFAPICNPM--------------------L 180 smWGpkafsaylgeddgaWqegdpvllakalsaslralrIyldvGtredf + W +kaf lg+d+++W+++d+ +l+k s+ +++l I++d+G+ ++f Rabbit4Lib 181 CVWSKKAFGEFLGPDQNKWKAYDATHLVK--SYTGSQLDILIDQGKADEF 228 lgdqlageglevaarnrelaeqlaargvgghdhvyyFppsGgHdwaydmW + ql++e+++ a+ +++++ +++r+++g+dh yy + Rabbit4Lib 229 YD-QLLPENFIAACTEKKIP--VVFRLQEGYDHGYY-------------F 262 raaLiaalidl<-* +a++ia d+ Rabbit4Lib 263 IATFIAVTSDI 273 // Query: Rabbit4Lib.272.C1 772 1 825 nseq=3; minus strand; translated Scores for sequence family classification (score includes all domains): Model Description Score E-value N -------- ----------- ----- ------- --- Thyroglobulin_1 Thyroglobulin type-1 repeat 136.2 6e-37 1 Parsed for domains: Model Domain seq-f seq-t hmm-f hmm-t score E-value -------- ------- ----- ----- ----- ----- ----- ------- Thyroglobulin_1 1/1 67 146 .. 1 81 [] 136.2 6e-37 Alignments of top-scoring domains: Thyroglobulin_1: domain 1 of 1, from 67 to 146: score 136.2, E = 6e-37 *->Cqrelervleslaaeqlkte.ehlesprglYvPnCdenGfYkpvQCd Cq+el++vle++++++l++++++le+++ l +PnCd++G Y+ +QC+ Rabbit4Lib 67 CQQELDQVLERISTMRLPDDrGPLENLYALQIPNCDKHGLYNLKQCK 113 pSlggqrGeCWCVDaetGkelpGtrdvgGetPprC<-* +Sl+gqrGeCWCV+++tGk ++G ++++G+ p+C Rabbit4Lib 114 MSLNGQRGECWCVNPNTGKVIEGAPTIRGD--PQC 146 // Query: Rabbit4Lib.272.C2 882 1 871 nseq=2; minus strand; translated Scores for sequence family classification (score includes all domains): Model Description Score E-value N -------- ----------- ----- ------- --- Thyroglobulin_1 Thyroglobulin type-1 repeat 119.9 4.7e-32 1 IGFBP Insulin-like growth factor binding pr 70.5 3.5e-17 1 Parsed for domains: Model Domain seq-f seq-t hmm-f hmm-t score E-value -------- ------- ----- ----- ----- ----- ----- ------- IGFBP 1/1 10 70 .. 1 84 [] 70.5 3.5e-17 Thyroglobulin_1 1/1 177 256 .. 1 81 [] 119.9 4.7e-32 Alignments of top-scoring domains: IGFBP: domain 1 of 1, from 10 to 70: score 70.5, E = 3.5e-17 *->CprPcGGpCpaerlarCpPgPpvaPpaecaelvredGCGCClvCArq Cp pC++erla+C+P+P ++caelvre+ lvCAr Rabbit4Lib 10 CP-----PCTPERLAACGPPP----TEPCAELVREPXLRLLLVCARL 47 eGeaCGvytPrDeskGLyCarGaedaakaLrCrpppG<-* eGeaCGvy Pr Ca G LrC+p+p+ Rabbit4Lib 48 EGEACGVYAPR-------CAHG-------LRCYPNPD 70 Thyroglobulin_1: domain 1 of 1, from 177 to 256: score 119.9, E = 4.7e-32 *->Cqrelervleslaaeqlkte.ehlesprglYvPnCdenGfYkpvQCd Cq+el++vle++++ ++le+++ l +PnCd++G Y+ +QC+ Rabbit4Lib 177 CQQELDQVLERISTIAFLMIxGPLENLYALQIPNCDKHGLYNLKQCK 223 pSlggqrGeCWCVDaetGkelpGtrdvgGetPprC<-* +Sl+gqrGeCWCV+++tGk ++G ++++G+ p+C Rabbit4Lib 224 MSLNGQRGECWCVNPNTGKVIEGAPTIRGD--PQC 256 // Query: Rabbit4Lib.275.C5 342 44 581 nseq=3; minus strand; translated Scores for sequence family classification (score includes all domains): Model Description Score E-value N -------- ----------- ----- ------- --- PCI PCI domain 127.3 2.9e-34 1 Parsed for domains: Model Domain seq-f seq-t hmm-f hmm-t score E-value -------- ------- ----- ----- ----- ----- ----- ------- PCI 1/1 25 129 .. 1 135 [] 127.3 2.9e-34 Alignments of top-scoring domains: PCI: domain 1 of 1, from 25 to 129: score 127.3, E = 2.9e-34 *->payleLleafysgdlaefeelladhVvAkamkGwqkeeellqdpgla +a++ L+ a++++d++efe++l+ + +++++dp+++ Rabbit4Lib 25 LAMTNLVSAYQNNDITEFEKILKTN-----------HSNIMDDPFIR 60 ekvwlegdkhleeLrrkirelnllqlakftypapyssislsdlaellgls e h+eeL+r+ir+++l++l+k py++i+++ ++++l+++ Rabbit4Lib 61 E--------HIEELLRNIRTQVLIKLIK-----PYTRIHIPFISKELNID 97 vvedvlqdevEkilsklIadgrirgkIDqvngivvvse<-* v ++vE++l+++I+d++i+g IDqvn+ ++ + Rabbit4Lib 98 V------ADVESLLVQCILDNTIHGLIDQVNQLLELDH 129 // Query: Rabbit4Lib.277.C1 285 1 312 nseq=2; minus strand; translated Scores for sequence family classification (score includes all domains): Model Description Score E-value N -------- ----------- ----- ------- --- [no hits above thresholds] Parsed for domains: Model Domain seq-f seq-t hmm-f hmm-t score E-value -------- ------- ----- ----- ----- ----- ----- ------- [no hits above thresholds] Alignments of top-scoring domains: [no hits above thresholds] // Query: Rabbit4Lib.278.C1 439 15 449 nseq=2; minus strand; translated Scores for sequence family classification (score includes all domains): Model Description Score E-value N -------- ----------- ----- ------- --- Ribosomal_L22e Ribosomal L22e protein family 199.9 4e-56 1 Parsed for domains: Model Domain seq-f seq-t hmm-f hmm-t score E-value -------- ------- ----- ----- ----- ----- ----- ------- Ribosomal_L22e 1/1 7 144 .] 1 117 [] 199.9 4e-56 Alignments of top-scoring domains: Ribosomal_L22e: domain 1 of 1, from 7 to 144: score 199.9, E = 4e-56 *->srKkKVslkftvDctnpvEDgIfDvAdf................... + kK kf++D t+p EDgIfD +f+ +++ + ++ ++ Rabbit4Lib 7 KKPKKSTWKFNLDFTHPMEDGIFDSGNFgafpseylgfxfpslhsfc 53 ...EkYLidrIKVnGKvGNLGnnvvkversksSKvtVvSevpFSkrYLKY ++E++L +++KVnGK+GNLGn v +er k K+tVvSe FSkrYLKY Rabbit4Lib 54 fekEQFLREKVKVNGKTGNLGNVVH-IERFK-NKITVVSEKQFSKRYLKY 101 LTKKYLKKNsLRDWLRVVankKnsYELRYfqinsgdAD..EeeD<-* LTKKYLKKN+LRDWLRVVa K++YELRYfqi++++ D++E eD Rabbit4Lib 102 LTKKYLKKNNLRDWLRVVASDKETYELRYFQISQDE-DgsESED 144 // Query: Rabbit4Lib.278.C2 338 1 395 nseq=3; minus strand; translated Scores for sequence family classification (score includes all domains): Model Description Score E-value N -------- ----------- ----- ------- --- Ribosomal_L22e Ribosomal L22e protein family 227.9 1.4e-64 1 Parsed for domains: Model Domain seq-f seq-t hmm-f hmm-t score E-value -------- ------- ----- ----- ----- ----- ----- ------- Ribosomal_L22e 1/1 16 131 .] 1 117 [] 227.9 1.4e-64 Alignments of top-scoring domains: Ribosomal_L22e: domain 1 of 1, from 16 to 131: score 227.9, E = 1.4e-64 *->srKkKVslkftvDctnpvEDgIfDvAdfEkYLidrIKVnGKvGNLGn + kK kf++D t+p EDgIfD +fE++L +++KVnGK+GNLGn Rabbit4Lib 16 KKPKKSTWKFNLDFTHPMEDGIFDSGNFEQFLREKVKVNGKTGNLGN 62 nvvkversksSKvtVvSevpFSkrYLKYLTKKYLKKNsLRDWLRVVankK v +er k K+tVvSe FSkrYLKYLTKKYLKKN+LRDWLRVVa K Rabbit4Lib 63 VVH-IERFK-NKITVVSEKQFSKRYLKYLTKKYLKKNNLRDWLRVVASDK 110 nsYELRYfqinsgdAD..EeeD<-* ++YELRYfqi++++ D++E eD Rabbit4Lib 111 ETYELRYFQISQDE-DgsESED 131 // Query: Rabbit4Lib.278.C3 181 1 254 nseq=2; minus strand; translated Scores for sequence family classification (score includes all domains): Model Description Score E-value N -------- ----------- ----- ------- --- Ribosomal_L22e Ribosomal L22e protein family 41.5 1.9e-08 1 Parsed for domains: Model Domain seq-f seq-t hmm-f hmm-t score E-value -------- ------- ----- ----- ----- ----- ----- ------- Ribosomal_L22e 1/1 10 84 .] 1 117 [] 41.5 1.9e-08 Alignments of top-scoring domains: Ribosomal_L22e: domain 1 of 1, from 10 to 84: score 41.5, E = 1.9e-08 *->srKkKVslkftvDctnpvEDgIfDvAdfEkYLidrIKVnGKvGNLGn + kK kf++D t+p EDgIfD +f Rabbit4Lib 10 KKPKKSTWKFNLDFTHPMEDGIFDSGNF------------------- 37 nvvkversksSKvtVvSevpFSkrYLKYLTKKYLKKNsLRDWLRVVankK v + LKKN+LRDWLRVVa K Rabbit4Lib 38 -VFEIPYQE-----------------------DLKKNNLRDWLRVVASDK 63 nsYELRYfqinsgdAD..EeeD<-* ++YELRYfqi++++ D++E eD Rabbit4Lib 64 ETYELRYFQISQDE-DgsESED 84 // Query: Rabbit4Lib.278.C4 445 29 397 nseq=5; minus strand; translated Scores for sequence family classification (score includes all domains): Model Description Score E-value N -------- ----------- ----- ------- --- Ribosomal_L22e Ribosomal L22e protein family 227.9 1.4e-64 1 Parsed for domains: Model Domain seq-f seq-t hmm-f hmm-t score E-value -------- ------- ----- ----- ----- ----- ----- ------- Ribosomal_L22e 1/1 7 122 .] 1 117 [] 227.9 1.4e-64 Alignments of top-scoring domains: Ribosomal_L22e: domain 1 of 1, from 7 to 122: score 227.9, E = 1.4e-64 *->srKkKVslkftvDctnpvEDgIfDvAdfEkYLidrIKVnGKvGNLGn + kK kf++D t+p EDgIfD +fE++L +++KVnGK+GNLGn Rabbit4Lib 7 KKPKKSTWKFNLDFTHPMEDGIFDSGNFEQFLREKVKVNGKTGNLGN 53 nvvkversksSKvtVvSevpFSkrYLKYLTKKYLKKNsLRDWLRVVankK v +er k K+tVvSe FSkrYLKYLTKKYLKKN+LRDWLRVVa K Rabbit4Lib 54 VVH-IERFK-NKITVVSEKQFSKRYLKYLTKKYLKKNNLRDWLRVVASDK 101 nsYELRYfqinsgdAD..EeeD<-* ++YELRYfqi++++ D++E eD Rabbit4Lib 102 ETYELRYFQISQDE-DgsESED 122 // Query: Rabbit4Lib.283.C1 178 1 177 nseq=27; translated Scores for sequence family classification (score includes all domains): Model Description Score E-value N -------- ----------- ----- ------- --- [no hits above thresholds] Parsed for domains: Model Domain seq-f seq-t hmm-f hmm-t score E-value -------- ------- ----- ----- ----- ----- ----- ------- [no hits above thresholds] Alignments of top-scoring domains: [no hits above thresholds] // Query: Rabbit4Lib.285.C1 60 283 348 nseq=2; minus strand; translated Scores for sequence family classification (score includes all domains): Model Description Score E-value N -------- ----------- ----- ------- --- [no hits above thresholds] Parsed for domains: Model Domain seq-f seq-t hmm-f hmm-t score E-value -------- ------- ----- ----- ----- ----- ----- ------- [no hits above thresholds] Alignments of top-scoring domains: [no hits above thresholds] // Query: Rabbit4Lib.289.C2 781 1 748 nseq=2; minus strand; translated Scores for sequence family classification (score includes all domains): Model Description Score E-value N -------- ----------- ----- ------- --- Reticulon Reticulon 367.3 1.6e-106 1 NAD_binding_4 Male sterility protein -121.3 6 1 FliP FliP family -151.3 7.6 1 Parsed for domains: Model Domain seq-f seq-t hmm-f hmm-t score E-value -------- ------- ----- ----- ----- ----- ----- ------- NAD_binding_4 1/1 11 191 .. 1 286 [] -121.3 6 FliP 1/1 78 199 .. 1 205 [] -151.3 7.6 Reticulon 1/1 58 247 .. 1 208 [] 367.3 1.6e-106 Alignments of top-scoring domains: NAD_binding_4: domain 1 of 1, from 11 to 191: score -121.3, E = 6 *->LTGATGFLGkvLlekLLrscpavkkiy...cLVRakdgesaleRlre L+++++++ i+++++LV ++ ++ + + ++e Rabbit4Lib 11 ----------------LDTQTEIGSIVkpkVLVKEAEKKLPSDTVKE 41 ellkyplfdrllykeekPealerivpvaGDlsepnLGLsdedfqeLaeev + +f+ + l++ +v Dl ++++ +++ Rabbit4Lib 42 DRSPSAIFSAE---------LSKTSVV--DLLY---------WRDI-KKT 70 DviiHnAAtVnfdepykdlratNVlGTrevLrLAkqmkklkgqafvhVST v++ +A+ ++ ++v+ + + + a+ S Rabbit4Lib 71 GVVF--GASLFLLL------------SLTVFSIVSVTAYI---ALALLSV 103 iGqfAyvngeregeleEkvypegppldpekeikLvewlddekldedepal + + g + ++ +++ Rabbit4Lib 104 ----TISFRIYKG-----------------------------VIQAIQKS 120 l.glpn.gYtqt.KwlAEqlvreaadrggLPvvIyRPsivtgtykepvtG +g+p + Y ++ + +E lv++++ + ++ v +t+ke + Rabbit4Lib 121 DeGHPFrAYLESdVAISEELVQKYS---NSA-----LGHVNCTIKELRR- 161 widnddfgprgllggagkGvlpdilgdpdavrldlvPVDyVanai<-* dd +++ l+ ++ + ++ V n++ Rabbit4Lib 162 LFLVDD-LVDSLKFAVLM--------------WVFTYVGALFNGL 191 FliP: domain 1 of 1, from 78 to 199: score -151.3, E = 7.6 *->lLtvLsLlPfilimmTSFlKisiVLsllRNALGvQQvPPNmvLyGlA l +LsL +f ++ +T+++ AL +L+++ Rabbit4Lib 78 LFLLLSLTVFSIVSVTAYI-----------AL---------ALLSVT 104 LfLTlFVMaPvfeeiydrahqplldalsniislqealdkglePlReFmlk + ++iy+ ++q +++ +d+g P+R ++ Rabbit4Lib 105 ----------ISFRIYKGVIQAIQK-----------SDEG-HPFRAYL-- 130 htdekhelalFmrsareerlwPkemkaatlekddLlvLiPAFvlSELkrA e ++a ++ ++ l ++ ++ EL+r Rabbit4Lib 131 ---ES-DVAISEELV-------QKYSNSALGHVNC-------TIKELRR- 161 FeIGFLiYLPFiVIDLVVAsiLMAMGMmMvpPvtISLPFKLlLFV..... F+V DLV SL F l V + + Rabbit4Lib 162 ---------LFLVDDLVD-----------------SLKFAVLMWVftyvg 185 .LvDGWtLLlggLv<-* L +G tLL+ L+ Rabbit4Lib 186 aLFNGLTLLILALI 199 Reticulon: domain 1 of 1, from 58 to 247: score 367.3, E = 1.6e-106 *->vaDvllWRdkkkSGiVLgsaTalwvLFeLaeYsLltvvshillllLa v+D+l+WRd+kk+G+V+g++ l++L++L+ +s+++v+++i+l+lL+ Rabbit4Lib 58 VVDLLYWRDIKKTGVVFGAS--LFLLLSLTVFSIVSVTAYIALALLS 102 vTISlflwsnvaqainKsdptiPFkaYLdeevtlPeElvlkladslrvhv vTIS+++++ v+qai+Ksd+++PF+aYL+++v+++eElv+k+++s+ hv Rabbit4Lib 103 VTISFRIYKGVIQAIQKSDEGHPFRAYLESDVAISEELVQKYSNSALGHV 152 NrtlsiLrdlalvrDlvksLkvivgLWvltyvGawfNgLTLvyialvllF N+t+++Lr+l+lv+Dlv+sLk++v++Wv+tyvGa+fNgLTL+++al++lF Rabbit4Lib 153 NCTIKELRRLFLVDDLVDSLKFAVLMWVFTYVGALFNGLTLLILALISLF 202 TvPvlYEKyqdqIDhyvekarkelkkqYavlDekVEskkakIlsKiPGlr +vPv+YE++q+qIDhy+++a+k +k++ +akI++KiPG Rabbit4Lib 203 SVPVIYERHQAQIDHYLGLANKNVKDA-----------MAKIQAKIPG-- 239 slavrgslkkK<-* ++ l++K Rabbit4Lib 240 ---LKPKLNDK 247 // Query: Rabbit4Lib.290.C1 219 124 298 nseq=2; minus strand; translated Scores for sequence family classification (score includes all domains): Model Description Score E-value N -------- ----------- ----- ------- --- [no hits above thresholds] Parsed for domains: Model Domain seq-f seq-t hmm-f hmm-t score E-value -------- ------- ----- ----- ----- ----- ----- ------- [no hits above thresholds] Alignments of top-scoring domains: [no hits above thresholds] // Query: Rabbit4Lib.291.C1 714 1 760 nseq=2; minus strand; translated Scores for sequence family classification (score includes all domains): Model Description Score E-value N -------- ----------- ----- ------- --- P34-Arc Arp2/3 complex, 34 kD subunit p34-Arc 609.1 2.5e-179 1 MuDR MuDR family transposase -57.8 9.4 1 Parsed for domains: Model Domain seq-f seq-t hmm-f hmm-t score E-value -------- ------- ----- ----- ----- ----- ----- ------- MuDR 1/1 89 222 .. 1 176 [] -57.8 9.4 P34-Arc 1/1 9 239 .. 1 269 [] 609.1 2.5e-179 Alignments of top-scoring domains: MuDR: domain 1 of 1, from 89 to 222: score -57.8, E = 9.4 *->dkrplfddieeessrrstaeltdvkleedgdgCldnidlfvGqvFks +++++ i++ + +e+++v+ ++d+ + + +vFk+ Rabbit4Lib 89 KEGENRAVIHYRD-----DETMYVESKKDRVT------VVFSTVFKD 124 Kedcqi.lLaiyAiknkFhFkvtkSdpkrlv......lkCidektCdWRv +d+ i+++ ++ +k+ ++ +++ p+ l+++++++l+ d Rabbit4Lib 125 DDDVVIgKVFMQEFKEGRR--ASHTAPQVLFshreppLELKDT------- 165 rAtrvkesdsFeIRkynseHTCsRsvttRsnrhRqATprvigsllkekys A++ ++ ++ i +l + Rabbit4Lib 166 DAAVGDNIGY------------------------------ITFVLFPRHT 185 gqfrgPrPkdlmelvledlgVkiSYskAW.RakevAv<-* ++ + ++l+ +++ l+++i+ skA+ ++++A Rabbit4Lib 186 NASARDNTINLIHTFRDYLHYHIKCSKAYiHTRMRAK 222 P34-Arc: domain 1 of 1, from 9 to 239: score 609.1, E = 2.5e-179 *->lvSvSlKayksvseLqkhGaleLLKFLADHYssvYGsllqekpEeGY +vS+SlK+yk eLq+hGa+eLLK +vYGs+l++ pE+GY Rabbit4Lib 9 MVSISLKFYK---ELQAHGADELLK-------RVYGSFLVN-PESGY 44 nvsllIdLeeLpaedilkeslakkisLsLKRnllAspFeklFqkQeagke nvsll+dLe+Lpa+ k+s+++++++ LKRn++As+Fek+Fq+Qe+gke Rabbit4Lib 45 NVSLLYDLENLPAS---KDSIVHQAGM-LKRNCFASVFEKYFQFQEEGKE 90 leerdgEvAanlDkqatsqeLaaInYRddETiylkPknDRVTVvFsTiFk +e+r a+I+YRddET+y+++k+DRVTVvFsT+Fk Rabbit4Lib 91 GENR-----------------AVIHYRDDETMYVESKKDRVTVVFSTVFK 123 DedDvIfGKVFLQEFvDaRrRnRaiqtAPQVLFShrePPLELkdvdgPvr D+dDv++GKVF+QEF+++Rr a++tAPQVLFShrePPLELkd+d ++ Rabbit4Lib 124 DDDDVVIGKVFMQEFKEGRR---ASHTAPQVLFSHREPPLELKDTD--AA 168 vGdaniGFVTFVLFPRHfnkkerdnsInlIqtFRdYLHYHIKCSKAYmHs vGd niG++TFVLFPRH+n+++rdn+InlI+tFRdYLHYHIKCSKAY+H+ Rabbit4Lib 169 VGD-NIGYITFVLFPRHTNASARDNTINLIHTFRDYLHYHIKCSKAYIHT 217 RMRaRVsdFiKVLNRAKPdpen<-* RMRa++sdF+KVLNRA+Pd+e+ Rabbit4Lib 218 RMRAKTSDFLKVLNRARPDAEK 239 // Query: Rabbit4Lib.293.C1 778 1 805 nseq=2; minus strand; translated Scores for sequence family classification (score includes all domains): Model Description Score E-value N -------- ----------- ----- ------- --- Thiolase_C Thiolase, C-terminal domain 242.5 6e-69 1 Thiolase_N Thiolase, N-terminal domain -20.2 2.3e-10 1 Parsed for domains: Model Domain seq-f seq-t hmm-f hmm-t score E-value -------- ------- ----- ----- ----- ----- ----- ------- Thiolase_N 1/1 1 110 [. 1 273 [] -20.2 2.3e-10 Thiolase_C 1/1 117 237 .. 1 140 [] 242.5 6e-69 Alignments of top-scoring domains: Thiolase_N: domain 1 of 1, from 1 to 110: score -20.2, E = 2.3e-10 *->mkdVVIVsAaRTPiGrsfgGslkdlsAvdLgaivikaaleragikpe Rabbit4Lib - ----------------------------------------------- - pkeVdeVImGnVLqAgeaGqnpARqAaLkAGlPesvPAlTiNkvCgSGLk Rabbit4Lib 1 ----------------X--------------------------------- 1 AvalaaQaIraGdaDivvAGGvESMSnaPyvlprnaarvgarmGdaklvD +r+G+ Rabbit4Lib 2 ----------------------------------------TRPGN----- 6 tmlkDGLtdafnlyhMGiTAEnvAkkygISReeQDeFAlrSqqKAaaAqk +AEn Akk +I R +QD +A++S+++++aA++ Rabbit4Lib 7 ------------------CAENTAKKLNIARDAQDTYAINSYTRSRAAWE 38 aGkFkdEIVPVtikgldrkGkpKitvdtDEgiRpgtTlEsLakLkPAFdK aGkF++E++PVti+ kGkp ++v+ ++++++++++ + kLk++F+K Rabbit4Lib 39 AGKFANEVIPVTIT---VKGKP-DVVVNEDEEYKRVDFSKVPKLKTVFQK 84 enGTVTAGNASglnDGAAAvllMses<-* enGTVTA+NAS lnDGAAAv+lM+++ Rabbit4Lib 85 ENGTVTAANASTLNDGAAAVVLMTAD 110 Thiolase_C: domain 1 of 1, from 117 to 237: score 242.5, E = 6e-69 *->lkplArivsyavvGvdPksimgigPvyAipkaLkkaGLtvnDiDlfE kplAri ++a+++vdP ++ i+P+yA+pk+Lk+aGL+ +Di ++E Rabbit4Lib 117 AKPLARIAAFADAAVDP-IDFPIAPAYAVPKVLKDAGLKKEDIAMWE 162 iNEAFAaQaLavakaLgldpegkqmrdgdntyggkeKVNvnGGAIALGHP +NEAF++++La++k+L++dp +KVN+nGGA++LGHP Rabbit4Lib 163 VNEAFSVVVLANIKMLEIDP---------------QKVNINGGAVSLGHP 197 lGaSGARilvtLlheLkrrgggkyGlaalCiGGGqGvAmvver<-* +G+SGARi+v+L+h+Lk+ g+yGla++C+GGG+++Am++++ Rabbit4Lib 198 IGMSGARIIVHLAHALKQ---GEYGLASICNGGGGASAMLIQK 237 // Query: Rabbit4Lib.296.C1 885 1 904 nseq=2; minus strand; translated Scores for sequence family classification (score includes all domains): Model Description Score E-value N -------- ----------- ----- ------- --- IPPT IPP transferase -108.7 0.0085 1 Parsed for domains: Model Domain seq-f seq-t hmm-f hmm-t score E-value -------- ------- ----- ----- ----- ----- ----- ------- IPPT 1/1 3 172 .. 1 264 [] -108.7 0.0085 Alignments of top-scoring domains: IPPT: domain 1 of 1, from 3 to 172: score -108.7, E = 0.0085 *->mqvYKgmDIgTAKPsleerkgvPHhLiDilDptesysaaeFqrdale +P a Rabbit4Lib 3 ------------RP------------------------------AYL 7 aiRVSeeIrarGkiPllVGGTgLYikaLldGlsdtPavGdpkvRakleeq ++ + I+ +k+ + + k + Rabbit4Lib 8 EM---SPIL---------------LKSVVSQRA----C-------KCLKK 28 leelGadyLhaeLasvDPeaAakIhPNDgrRivRALEVfyaTGkpiSefq le l + + ++++k V+ p+ + + Rabbit4Lib 29 LEYLTVNFFI-------VNMQKKV-------------VV-----PLEAXL 53 kenqknalkydivqigLkprerevLheRIerRvdaMlesGLveEVkaLya k +n+ +++L + +vL eR++ Rvd+Ml +GL+eE + + Rabbit4Lib 54 KF--PNP-----CILWLH-ADQTVLDERLDKRVDDMLAAGLLEELRDFHR 95 qgd..........lnedlpsirAIGYkEfllyLdGkdelt......kLeE ++ +++ ++++++++ + ++ IG+kEf +yL +++t++++++ L+ Rabbit4Lib 96 RYNqknvsedsqdYQHGI--FQSIGFKEFHEYLITEGKCTpetsnqLLKK 143 aieriiknTRqyAKRQlTWFRkdsqPvhWldig<-* ie++++ T++yA+ Q++W+++ ++g Rabbit4Lib 144 GIEALKQVTKRYARKQNRWIKNRFL----SRPG 172 // Query: Rabbit4Lib.298.C1 882 1 606 nseq=2; minus strand; translated Scores for sequence family classification (score includes all domains): Model Description Score E-value N -------- ----------- ----- ------- --- BRICHOS BRICHOS domain 115.0 1.4e-30 1 Parsed for domains: Model Domain seq-f seq-t hmm-f hmm-t score E-value -------- ------- ----- ----- ----- ----- ----- ------- BRICHOS 1/1 72 166 .. 1 109 [] 115.0 1.4e-30 Alignments of top-scoring domains: BRICHOS: domain 1 of 1, from 72 to 166: score 115.0, E = 1.4e-30 *->fsgsdeaiivhDFkngltAikdasgekCyikkldktaipslealvel ++g+ ++++++D+ g++A++++ ++ C++++l+k+aips+eal+ l Rabbit4Lib 72 NNGWNSWNTLWDYDAGFAATRLFAKKSCIVHTLNKDAIPSIEALDAL 118 lkniklggyipateyvPqsyliqeeksleyvvveerikkaDlsfLkGskI k++k++g++ ++k+l+y++++ +++ Dls++ G I Rabbit4Lib 119 AKEKKEKGAGGP-----------PPKGLVYSINPVKVD--DLSQF-GKHI 154 lrlCrdvptYwl<-* + +C +vptY++ Rabbit4Lib 155 AGMCQGVPTYEA 166 // Query: Rabbit4Lib.298.C2 588 1 317 nseq=4; minus strand; translated Scores for sequence family classification (score includes all domains): Model Description Score E-value N -------- ----------- ----- ------- --- BRICHOS BRICHOS domain 23.7 0.00027 1 Parsed for domains: Model Domain seq-f seq-t hmm-f hmm-t score E-value -------- ------- ----- ----- ----- ----- ----- ------- BRICHOS 1/1 5 70 .. 1 109 [] 23.7 0.00027 Alignments of top-scoring domains: BRICHOS: domain 1 of 1, from 5 to 70: score 23.7, E = 0.00027 *->fsgsdeaiivhDFkngltAikdasgekCyikkldktaipslealvel + +l+k+aips+eal+ l Rabbit4Lib 5 -----------------------------VQTLNKDAIPSIEALDAL 22 lkniklggyipateyvPqsyliqeeksleyvvveerikkaDlsfLkGskI k++k++g++ ++k+l+y++++ +++ Dls++ G I Rabbit4Lib 23 AKEKKEKGAGGP-----------PPKGLVYSINPVKVD--DLSQF-GKHI 58 lrlCrdvptYwl<-* + +C +vptY++ Rabbit4Lib 59 AGMCQGVPTYEA 70 // Query: Rabbit4Lib.301.C1 876 1 444 nseq=4; minus strand; translated Scores for sequence family classification (score includes all domains): Model Description Score E-value N -------- ----------- ----- ------- --- Tom22 Mitochondrial import receptor subunit Tom22 -31.5 0.035 1 Parsed for domains: Model Domain seq-f seq-t hmm-f hmm-t score E-value -------- ------- ----- ----- ----- ----- ----- ------- Tom22 1/1 18 143 .. 1 150 [] -31.5 0.035 Alignments of top-scoring domains: Tom22: domain 1 of 1, from 18 to 143: score -31.5, E = 0.035 *->VkLtEVkDevvqqdePqFsrnQavVekeedaedqedvdeedssdSDF e de ++ dae e eed++d Rabbit4Lib 18 --------EPLSPDE---------LLPKGDAEKTEEELEEDDDD--- 44 EdEFleeETllDRivALkdiVpptkRvkiadkykt.ttsFv.kkllsfaG E +e Tl R+ L ++ p Rv a ++ ++ + Fv +k f+ Rabbit4Lib 45 --ELDE--TLSERLWGLTEMFP--ERVRAAAGATFdLSLFVaQKMYRFSR 88 kaaWvvstsALLLGVPfalslaeeqqliemEkeiklqe....dAndVLAa a W +ts L P e mE++ +lq+++ ++ + Rabbit4Lib 89 AALWIGTTSFMILVLPVVF----ETEKLQMEQQQQLQQrqilLGPNTGLS 134 GekdaAata<-* G+ +A++ Rabbit4Lib 135 GAMPGALPS 143 // Query: Rabbit4Lib.301.C2 179 267 500 nseq=2; translated Scores for sequence family classification (score includes all domains): Model Description Score E-value N -------- ----------- ----- ------- --- [no hits above thresholds] Parsed for domains: Model Domain seq-f seq-t hmm-f hmm-t score E-value -------- ------- ----- ----- ----- ----- ----- ------- [no hits above thresholds] Alignments of top-scoring domains: [no hits above thresholds] // Query: Rabbit4Lib.301.C3 389 1 408 nseq=2; minus strand; translated Scores for sequence family classification (score includes all domains): Model Description Score E-value N -------- ----------- ----- ------- --- [no hits above thresholds] Parsed for domains: Model Domain seq-f seq-t hmm-f hmm-t score E-value -------- ------- ----- ----- ----- ----- ----- ------- [no hits above thresholds] Alignments of top-scoring domains: [no hits above thresholds] // Query: Rabbit4Lib.305.C1 584 1 611 nseq=5; minus strand; translated Scores for sequence family classification (score includes all domains): Model Description Score E-value N -------- ----------- ----- ------- --- NAC NAC domain 111.9 1.3e-29 1 Parsed for domains: Model Domain seq-f seq-t hmm-f hmm-t score E-value -------- ------- ----- ----- ----- ----- ----- ------- NAC 1/1 81 139 .. 1 60 [] 111.9 1.3e-29 Alignments of top-scoring domains: NAC: domain 1 of 1, from 81 to 139: score 111.9, E = 1.3e-29 *->ddkKlqmklkKLgmkqieGveEVnifkedgEivihfnkpeVqkslga ddkKlq+ lkKLg+++i G+eEVn+f+ +g +vihfn+p+Vq+sl+a Rabbit4Lib 81 DDKKLQFSLKKLGVNNISGIEEVNMFTNQG-TVIHFNNPKVQASLAA 126 nTyvvtGkakekd<-* nT+++tG+a++k+ Rabbit4Lib 127 NTFTITGHAETKQ 139 // Query: Rabbit4Lib.305.C2 442 1 309 nseq=2; minus strand; translated Scores for sequence family classification (score includes all domains): Model Description Score E-value N -------- ----------- ----- ------- --- NAC NAC domain 22.9 0.0077 1 Parsed for domains: Model Domain seq-f seq-t hmm-f hmm-t score E-value -------- ------- ----- ----- ----- ----- ----- ------- NAC 1/1 2 38 .. 1 60 [] 22.9 0.0077 Alignments of top-scoring domains: NAC: domain 1 of 1, from 2 to 38: score 22.9, E = 0.0077 *->ddkKlqmklkKLgmkqieGveEVnifkedgEivihfnkpeVqkslga +++ f+ +g +vihfn+p+Vq+sl+a Rabbit4Lib 2 ---------------RVR-------FTNQG-TVIHFNNPKVQASLAA 25 nTyvvtGkakekd<-* nT+++tG+a++k+ Rabbit4Lib 26 NTFTITGHAETKQ 38 // Query: Rabbit4Lib.305.C3 563 1 602 nseq=3; minus strand; translated Scores for sequence family classification (score includes all domains): Model Description Score E-value N -------- ----------- ----- ------- --- NAC NAC domain 111.9 1.3e-29 1 Parsed for domains: Model Domain seq-f seq-t hmm-f hmm-t score E-value -------- ------- ----- ----- ----- ----- ----- ------- NAC 1/1 78 136 .. 1 60 [] 111.9 1.3e-29 Alignments of top-scoring domains: NAC: domain 1 of 1, from 78 to 136: score 111.9, E = 1.3e-29 *->ddkKlqmklkKLgmkqieGveEVnifkedgEivihfnkpeVqkslga ddkKlq+ lkKLg+++i G+eEVn+f+ +g +vihfn+p+Vq+sl+a Rabbit4Lib 78 DDKKLQFSLKKLGVNNISGIEEVNMFTNQG-TVIHFNNPKVQASLAA 123 nTyvvtGkakekd<-* nT+++tG+a++k+ Rabbit4Lib 124 NTFTITGHAETKQ 136 // Query: Rabbit4Lib.305.C4 604 1 452 nseq=2; minus strand; translated Scores for sequence family classification (score includes all domains): Model Description Score E-value N -------- ----------- ----- ------- --- NAC NAC domain 111.9 1.3e-29 1 Parsed for domains: Model Domain seq-f seq-t hmm-f hmm-t score E-value -------- ------- ----- ----- ----- ----- ----- ------- NAC 1/1 28 86 .. 1 60 [] 111.9 1.3e-29 Alignments of top-scoring domains: NAC: domain 1 of 1, from 28 to 86: score 111.9, E = 1.3e-29 *->ddkKlqmklkKLgmkqieGveEVnifkedgEivihfnkpeVqkslga ddkKlq+ lkKLg+++i G+eEVn+f+ +g +vihfn+p+Vq+sl+a Rabbit4Lib 28 DDKKLQFSLKKLGVNNISGIEEVNMFTNQG-TVIHFNNPKVQASLAA 73 nTyvvtGkakekd<-* nT+++tG+a++k+ Rabbit4Lib 74 NTFTITGHAETKQ 86 // Query: Rabbit4Lib.307.C1 506 1 476 nseq=5; minus strand; translated Scores for sequence family classification (score includes all domains): Model Description Score E-value N -------- ----------- ----- ------- --- Ank Ankyrin repeat 70.3 4.1e-17 3 Parsed for domains: Model Domain seq-f seq-t hmm-f hmm-t score E-value -------- ------- ----- ----- ----- ----- ----- ------- Ank 1/3 17 49 .. 1 33 [] 11.8 4 Ank 2/3 50 83 .. 1 33 [] 22.2 0.012 Ank 3/3 84 116 .. 1 33 [] 37.1 4e-07 Alignments of top-scoring domains: Ank: domain 1 of 3, from 17 to 49: score 11.8, E = 4 *->dGfTPLHlAalrgnlevvklLlsqGAdlnaqdd<-* + PLH Aa+rgnl+ +++ l++ +n d+ Rabbit4Lib 17 SIDNPLHEAAKRGNLSWLRECLDNRVGVNGLDK 49 Ank: domain 2 of 3, from 50 to 83: score 22.2, E = 0.012 *->dGfTPLHlAalrgnlevvklLls.qGAdlnaqdd<-* G T+L +A++ g++++v+ L + +ln q++ Rabbit4Lib 50 AGSTALYWACHGGHKDIVEVLFTqPNIELNQQNK 83 Ank: domain 3 of 3, from 84 to 116: score 37.1, E = 4e-07 *->dGfTPLHlAalrgnlevvklLlsqGAdlnaqdd<-* G+T+LH Aa +g++++v+lLl +GA +++++ Rabbit4Lib 84 LGDTALHAAAWKGYADIVQLLLAKGARTDLRNN 116 // Query: Rabbit4Lib.308.C1 1150 1 1045 nseq=2; minus strand; translated Scores for sequence family classification (score includes all domains): Model Description Score E-value N -------- ----------- ----- ------- --- Clathrin Region in Clathrin and VPS 161.0 2.1e-44 2 Parsed for domains: Model Domain seq-f seq-t hmm-f hmm-t score E-value -------- ------- ----- ----- ----- ----- ----- ------- Clathrin 1/2 1 93 [. 1 156 [] 19.6 0.00056 Clathrin 2/2 96 239 .. 1 156 [] 148.8 9.3e-41 Alignments of top-scoring domains: Clathrin: domain 1 of 2, from 1 to 93: score 19.6, E = 0.00056 *->lielsdpidvselVeifekrglleeLipyLesalkensfseepalqn Rabbit4Lib - ----------------------------------------------- - lLieayiksdpqkemerlealaknlknnnyDiekvarlcekaklyFweeA p +e+le l++++ +i+kv r++e+a+l+ +e+ Rabbit4Lib 1 ---------XPRVRREHLE-----LFWSRVNIPKVLRAAEQAHLW--AEL 34 fllykkDlsnfkdaivtlieli.eagnyqravdyavkrnnpelwaevlka ++ly+k ++++++ai+t++ ++++a+ +++d++ k++n+el+++++++ Rabbit4Lib 35 VFLYDK-YEEYDNAIITMMTHPtDAWKEGQFKDIITKVANVELYYRAIQF 83 cldkkrflla<-* +l++k++ll+ Rabbit4Lib 84 YLEFKPLLLN 93 Clathrin: domain 2 of 2, from 96 to 239: score 148.8, E = 9.3e-41 *->lielsdpidvselVeifekrglleeLipyLesalkensfseepalqn l++ls+++d+++ V++f+k ++l++++pyL+s++++ ++++ +++ Rabbit4Lib 96 LMVLSPRLDHTRAVNYFSKVKQLPLVKPYLRSVQNH---NNKSVNES 139 lLieayiksdpqkemerlealaknlknnnyDiekvarlcekakly.Fwee l+ + + ++d+q+++ ++ ++n+D+ +a+++ek++l +F++ Rabbit4Lib 140 LNNLFITEEDYQALRTSID------AYDNFDNISLAQRLEKHELIeFRRI 183 AfllykkDlsnfkdaivtlielieagnyqravdyavkrnnpelwaevlka A +l+k ++++k+ +++++++ ++y++a++ya + +++el +e+l++ Rabbit4Lib 184 AAYLFKG-NNRWKQSVELCKKD---SLYKDAMQYASESKDTELAEELLQW 229 cldkkrflla<-* +l++++++++ Rabbit4Lib 230 FLQEEKRECF 239 // Query: Rabbit4Lib.308.C3 148 317 450 nseq=3; minus strand; translated Scores for sequence family classification (score includes all domains): Model Description Score E-value N -------- ----------- ----- ------- --- [no hits above thresholds] Parsed for domains: Model Domain seq-f seq-t hmm-f hmm-t score E-value -------- ------- ----- ----- ----- ----- ----- ------- [no hits above thresholds] Alignments of top-scoring domains: [no hits above thresholds] // Query: Rabbit4Lib.308.C4 873 1 1000 nseq=3; minus strand; translated Scores for sequence family classification (score includes all domains): Model Description Score E-value N -------- ----------- ----- ------- --- Clathrin Region in Clathrin and VPS 197.7 1.8e-55 3 Parsed for domains: Model Domain seq-f seq-t hmm-f hmm-t score E-value -------- ------- ----- ----- ----- ----- ----- ------- Clathrin 1/3 1 84 [. 1 156 [] 10.3 0.0033 Clathrin 2/3 89 235 .. 1 156 [] 186.5 4.3e-52 Clathrin 3/3 238 334 .] 1 156 [] 6.1 0.0073 Alignments of top-scoring domains: Clathrin: domain 1 of 3, from 1 to 84: score 10.3, E = 0.0033 *->lielsdpidvselVeifekrglleeLipyLesalkensfseepalqn l + Rabbit4Lib 1 ---------------------------------LPT----------- 3 lLieayiksdpqkemerlealaknlknnnyDiekvarlcekaklyFweeA r + ++nn++i++v+++c++ k+y ++A Rabbit4Lib 4 ----------------RPN------GPNNAHIQQVGDRCYDEKMY--DAA 29 fllykkDlsnfkdaivtlielieagnyqravdyavkrnnpelwaevlkac +lly++ +snf ++++tl++l g+yq+avd a+k+n++++w+ev++ac Rabbit4Lib 30 KLLYNN-VSNFGRLASTLVHL---GEYQAAVDGARKANSTRTWKEVCFAC 75 ldkkrflla<-* +d+k+f+la Rabbit4Lib 76 VDGKEFRLA 84 Clathrin: domain 2 of 3, from 89 to 235: score 186.5, E = 4.3e-52 *->lielsdpidvselVeifekrglleeLipyLesalkensfseepalqn l++++++++++el++++++rg++eeLi Le+al+++ ++++++++ Rabbit4Lib 89 LHIVVHADELEELINYYQDRGYFEELITMLEAALGLE--RAHMGMFT 133 lLieayiksdpqkemerlealaknlknnnyDiekvarlcekaklyFweeA +L+++y+k++pqk++e+le l++++ +i+kv r++e+a+l+ +e+ Rabbit4Lib 134 ELAILYSKFKPQKMREHLE-----LFWSRVNIPKVLRAAEQAHLW--AEL 176 fllykkDlsnfkdaivtlieli.eagnyqravdyavkrnnpelwaevlka ++ly+k ++++++ai+t++ ++++a+ +++d++ k++n+el+++++++ Rabbit4Lib 177 VFLYDK-YEEYDNAIITMMTHPtDAWKEGQFKDIITKVANVELYYRAIQF 225 cldkkrflla<-* +l++k++ll+ Rabbit4Lib 226 YLEFKPLLLN 235 Clathrin: domain 3 of 3, from 238 to 334: score 6.1, E = 0.0073 *->lielsdpidvselVeifekrglleeLipyLesalkensfseepalqn l++ls+++d+++ V++f+k ++l++++pyL+s++++ ++++ +++ Rabbit4Lib 238 LMVLSPRLDHTRAVNYFSKVKQLPLVKPYLRSVQNH---NNKSVNES 281 lLieayiksdpqkemerlealaknlknnnyDiekvarlcekakly.Fwee l+ + + ++d+q++ +++ ++n+D+ +a++ k++l +F++ Rabbit4Lib 282 LNNLFITEEDYQALXNIID------AYDNFDNISLAQRFGKHELIeFRRI 325 AfllykkDlsnfkdaivtlielieagnyqravdyavkrnnpelwaevlka A +l+k Rabbit4Lib 326 AAYLFKA-------------TX---------------------------- 334 cldkkrflla<-* Rabbit4Lib - ---------- - // Query: Rabbit4Lib.314.C1 626 148 647 nseq=2; minus strand; translated Scores for sequence family classification (score includes all domains): Model Description Score E-value N -------- ----------- ----- ------- --- [no hits above thresholds] Parsed for domains: Model Domain seq-f seq-t hmm-f hmm-t score E-value -------- ------- ----- ----- ----- ----- ----- ------- [no hits above thresholds] Alignments of top-scoring domains: [no hits above thresholds] // Query: Rabbit4Lib.315.C1 228 1167 1420 nseq=2; translated Scores for sequence family classification (score includes all domains): Model Description Score E-value N -------- ----------- ----- ------- --- [no hits above thresholds] Parsed for domains: Model Domain seq-f seq-t hmm-f hmm-t score E-value -------- ------- ----- ----- ----- ----- ----- ------- [no hits above thresholds] Alignments of top-scoring domains: [no hits above thresholds] // Query: Rabbit4Lib.321.C1 511 150 575 nseq=2; minus strand; translated Scores for sequence family classification (score includes all domains): Model Description Score E-value N -------- ----------- ----- ------- --- Ribosomal_L11 Ribosomal protein L11, RNA binding do 80.7 3e-20 1 Ribosomal_L11_N Ribosomal protein L11, N-terminal dom 52.5 9e-12 1 Parsed for domains: Model Domain seq-f seq-t hmm-f hmm-t score E-value -------- ------- ----- ----- ----- ----- ----- ------- Ribosomal_L11_N 1/1 1 46 [. 1 60 [] 52.5 9e-12 Ribosomal_L11 1/1 51 119 .. 1 69 [] 80.7 3e-20 Alignments of top-scoring domains: Ribosomal_L11_N: domain 1 of 1, from 1 to 46: score 52.5, E = 9e-12 *->vikLqveaGkAkPaPPlGPaLGqlGvnimefckefNaaTadlkkGlp +++l+P++G+lG++++++++++++aT+d +kGl+ Rabbit4Lib 1 -------------TSALAPKIGPLGLSPKKVGDDIAKATGD-WKGLR 33 vPVeItvyeDrsf<-* ++V++t+++++++ Rabbit4Lib 34 ITVKLTIQNRQAQ 46 Ribosomal_L11: domain 1 of 1, from 51 to 119: score 80.7, E = 3e-20 *->ktPPasvLlkkaaGiekGSgePnkekVGkitreqireIAkqKmpDLn ++++a+++++++++++++++++n++ V +it+++i++IA+q++++ Rabbit4Lib 51 PSASALIIKALKEPPRDRKKQKNINTVXNITFDEIVNIARQMRHRVP 97 AndleaamkmieGTArSmGItV<-* l++++k+i+GTA+S+G++ Rabbit4Lib 98 SQKLSGTIKEILGTAQSVGCNG 119 // Query: Rabbit4Lib.321.C2 501 171 596 nseq=2; minus strand; translated Scores for sequence family classification (score includes all domains): Model Description Score E-value N -------- ----------- ----- ------- --- Ribosomal_L11 Ribosomal protein L11, RNA binding do 80.7 3e-20 1 Ribosomal_L11_N Ribosomal protein L11, N-terminal dom 52.5 9e-12 1 Parsed for domains: Model Domain seq-f seq-t hmm-f hmm-t score E-value -------- ------- ----- ----- ----- ----- ----- ------- Ribosomal_L11_N 1/1 1 46 [. 1 60 [] 52.5 9e-12 Ribosomal_L11 1/1 51 119 .. 1 69 [] 80.7 3e-20 Alignments of top-scoring domains: Ribosomal_L11_N: domain 1 of 1, from 1 to 46: score 52.5, E = 9e-12 *->vikLqveaGkAkPaPPlGPaLGqlGvnimefckefNaaTadlkkGlp +++l+P++G+lG++++++++++++aT+d +kGl+ Rabbit4Lib 1 -------------TSALAPKIGPLGLSPKKVGDDIAKATGD-WKGLR 33 vPVeItvyeDrsf<-* ++V++t+++++++ Rabbit4Lib 34 ITVKLTIQNRQAQ 46 Ribosomal_L11: domain 1 of 1, from 51 to 119: score 80.7, E = 3e-20 *->ktPPasvLlkkaaGiekGSgePnkekVGkitreqireIAkqKmpDLn ++++a+++++++++++++++++n++ V +it+++i++IA+q++++ Rabbit4Lib 51 PSASALIIKALKEPPRDRKKQKNINTVXNITFDEIVNIARQMRHRVP 97 AndleaamkmieGTArSmGItV<-* l++++k+i+GTA+S+G++ Rabbit4Lib 98 SQKLSGTIKEILGTAQSVGCNG 119 // Query: Rabbit4Lib.326.C1 289 16 189 nseq=2; minus strand; translated Scores for sequence family classification (score includes all domains): Model Description Score E-value N -------- ----------- ----- ------- --- [no hits above thresholds] Parsed for domains: Model Domain seq-f seq-t hmm-f hmm-t score E-value -------- ------- ----- ----- ----- ----- ----- ------- [no hits above thresholds] Alignments of top-scoring domains: [no hits above thresholds] // Query: Rabbit4Lib.327.C1 236 88 300 nseq=5; minus strand; translated Scores for sequence family classification (score includes all domains): Model Description Score E-value N -------- ----------- ----- ------- --- [no hits above thresholds] Parsed for domains: Model Domain seq-f seq-t hmm-f hmm-t score E-value -------- ------- ----- ----- ----- ----- ----- ------- [no hits above thresholds] Alignments of top-scoring domains: [no hits above thresholds] // Query: Rabbit4Lib.329.C1 161 1 315 nseq=5; minus strand; translated Scores for sequence family classification (score includes all domains): Model Description Score E-value N -------- ----------- ----- ------- --- RRM_1 RNA recognition motif. (a.k.a. RRM, RBD, or 88.3 1.5e-22 1 Parsed for domains: Model Domain seq-f seq-t hmm-f hmm-t score E-value -------- ------- ----- ----- ----- ----- ----- ------- RRM_1 1/1 32 101 .. 1 74 [] 88.3 1.5e-22 Alignments of top-scoring domains: RRM_1: domain 1 of 1, from 32 to 101: score 88.3, E = 1.5e-22 *->lfVgNLppdtteedLkdlFskfGpiesikivrDttretgrskGfaFV +fV+NLp+d+t+++Lk+ Fs++G ++ ++i+ e+g+skG++ V Rabbit4Lib 32 IFVRNLPFDLTWQKLKEKFSQCGHVMFAEIKM----ENGKSKGCGTV 74 eFedeedAekAldalnGkelggrelrv<-* +F+++e+AekA + +nG+++ gre+ v Rabbit4Lib 75 RFDSPESAEKACRIMNGIKISGREIDV 101 // Query: Rabbit4Lib.329.C2 311 1 316 nseq=2; minus strand; translated Scores for sequence family classification (score includes all domains): Model Description Score E-value N -------- ----------- ----- ------- --- [no hits above thresholds] Parsed for domains: Model Domain seq-f seq-t hmm-f hmm-t score E-value -------- ------- ----- ----- ----- ----- ----- ------- [no hits above thresholds] Alignments of top-scoring domains: [no hits above thresholds] // Query: Rabbit4Lib.331.C1 294 269 376 nseq=2; translated Scores for sequence family classification (score includes all domains): Model Description Score E-value N -------- ----------- ----- ------- --- [no hits above thresholds] Parsed for domains: Model Domain seq-f seq-t hmm-f hmm-t score E-value -------- ------- ----- ----- ----- ----- ----- ------- [no hits above thresholds] Alignments of top-scoring domains: [no hits above thresholds] // Query: Rabbit4Lib.332.C1 649 1 701 nseq=2; minus strand; translated Scores for sequence family classification (score includes all domains): Model Description Score E-value N -------- ----------- ----- ------- --- DUF6 Integral membrane protein DUF6 -4.4 2 1 Nuc_sug_transp Nucleotide-sugar transporter -24.2 5.8e-11 1 DUF250 Domain of unknown function, DUF250 -48.2 2.6 1 Herpes_UL69 Herpesvirus transcriptional regulator -99.7 5 1 Parsed for domains: Model Domain seq-f seq-t hmm-f hmm-t score E-value -------- ------- ----- ----- ----- ----- ----- ------- Herpes_UL69 1/1 19 219 .. 1 248 [] -99.7 5 Nuc_sug_transp 1/1 3 222 .. 1 300 [] -24.2 5.8e-11 DUF250 1/1 97 231 .. 1 164 [] -48.2 2.6 DUF6 1/1 106 231 .. 1 128 [] -4.4 2 Alignments of top-scoring domains: Herpes_UL69: domain 1 of 1, from 19 to 219: score -99.7, E = 5 *->pdtpirkkvswekLlttgykllrtFvtdslnkeawralRkeRiFAvi d+ ++++s k + + + + + +l + + +al Rabbit4Lib 19 MDPSTYQVLSNLK-IGSTALFYCLCLRHRLSARQGLALLLL----MA 60 nspgLctllAfaDEtltWlKlhlvhnlplneppeDpIlaTagallenlf. +++ +++ l+ + l e p +a a + ++ + Rabbit4Lib 61 AGA-------------CYAAGGLQEPGTLF--XETPRVAAASPMPLHITp 95 nKLrplmLCpClLrnrggGGgDieyslvkqlayllcstnRaapnsefDlq + L +l+L Cl + + ll ++R l Rabbit4Lib 96 LGLLLLVL-YCLISGLSS-----------VYTELLMKRQR--------LP 125 daapllfevplqqaLgLlaaFalvvpAriarrvlrgskfpqflrdfda.. a lf l +F + + + +v gs+ p fl+ f++ Rabbit4Lib 126 LALQNLF----------LYTFGVLLN--LGLHVGGGSG-PGFLEGFSGwa 162 .gqvleeYrPGtvsaLllealetHkreCds...eeCrlttrailgPkvyt vl + ++s+Ll++a+++H + + ++C+l+++a l+ Rabbit4Lib 163 vLVVLSQ----ALSGLLMSAVMKHGSSITRlfvVSCSLVVNAVLSA--AL 206 kGL.....fFcPy<-* + L+ + fF + Rabbit4Lib 207 LQLqltaaFFLAT 219 Nuc_sug_transp: domain 1 of 1, from 3 to 222: score -24.2, E = 5.8e-11 *->kfsreLhkailnnpsdtLKvaVPsliYtlQNNLlYvALSNLdAAtYq +a+ +n NNL+ + + d+ tYq Rabbit4Lib 3 -------HASGAN-----------------NNLVIYLQRYMDPSTYQ 25 VTYQLKILTTAlFsvlmLnRkLstyQWaSLllLflGVaiVQldqkssqet V ++LKI +TAlF l L+ +Ls +Q ++LllL++ a ++ + + t Rabbit4Lib 26 VLSNLKIGSTALFYCLCLRHRLSARQGLALLLLMAAGACYAAGGLQEPGT 75 nskreaahdAffspSnscLLFRSECprkdnctakelTfpeakwnttarve + + ++A ++ + Rabbit4Lib 76 LFXETPRVAA-----------------------------------ASPMP 90 qNpRLvlGlsAVLaaCftSGFAGVYFEKiLKgsnQLsaSvWIRNiQLyff ++ lGl + + C++SG+ VY E K ++ ++N+ Ly f Rabbit4Lib 91 LHI-TPLGLLLLVLYCLISGLSSVYTELLMKRQR---LPLALQNLFLYTF 136 GiffalltLGcwlyDgeaIsekGPnPiEiWnnFFfGYdavVWavvllqAv G++++ LG+ + g+ + G F++G++ ++vvl qA+ Rabbit4Lib 137 GVLLN---LGLHVGGGS---GPG---------FLEGFSGWAVLVVLSQAL 171 GGLvvAvVvKYADNIlKgFAtSlaIiLstvaSvlvLFPDFritltFlLGa GL+ + V+K I F +S + + ++v+S L +++t F+L + Rabbit4Lib 172 SGLLMSAVMKHGSSITRLFVVSCSLVVNAVLSAA-LL-QLQLTAAFFLAT 219 ilV<-* +l Rabbit4Lib 220 LLI 222 DUF250: domain 1 of 1, from 97 to 231: score -48.2, E = 2.6 *->GfilalaasllfaLrlilsqkllkkklkkgtklnplellyylspvaf G++l ++ l+++L ++++++l+k+ + l +l++y+ f Rabbit4Lib 97 GLLLLVLYCLISGLSSVYTELLMKRQ---RLPLALQNLFLYT----F 136 ivllpgllfvegfklnkfilkakssdlseEmeFkkGktqryvlllllsgv vll ++l v+g + ++ +l +s + vl+ l +++ Rabbit4Lib 137 GVLLNLGLHVGGGS-GPGFLEGFS-------------G-WAVLVVLSQAL 171 lafllnlsaflllgrtSplTysVagtvKrvvvivlsviiFgFmDdpvtpl + l+ ++++ S++T + + +vv vls+ +++ ++t+ Rabbit4Lib 172 SGLLMS----AVMKHGSSITRLFVVSCSLVVNAVLSAALLQ---LQLTAA 214 nilGlaiAlaGvvlYsy<-* +l++++ + v lY Rabbit4Lib 215 FFLATLLIGLAVHLYYG 231 DUF6: domain 1 of 1, from 106 to 231: score -4.4, E = 2 *->fiWalytvfskkller..ispltltawrfliagilllilllfllkgp +i +l++v++ +l++r++++ + + + ++ l+ l ++++g+ Rabbit4Lib 106 LISGLSSVYTELLMKRqrLPLALQNLFLYTFGV---LLNLGLHVGGG 149 pllallslk.ilallylgilgtalgyllyfyalkyvsaskasvltslsPv + + + ++ +++ + al ll+ +k +s+ + +++s s v Rabbit4Lib 150 S-GPGFLEGfSGWAVLVVLSQ-ALSGLLMSAVMKHGSSITRLFVVSCSLV 197 ftlilsvllLgEkltlkqllGivlillGvllisl<-* + ++ls++lL+ +lt +l+++li l+v l + Rabbit4Lib 198 VNAVLSAALLQLQLTAAFFLATLLIGLAVHLYYG 231 // Query: Rabbit4Lib.332.C2 483 1 415 nseq=2; minus strand; translated Scores for sequence family classification (score includes all domains): Model Description Score E-value N -------- ----------- ----- ------- --- [no hits above thresholds] Parsed for domains: Model Domain seq-f seq-t hmm-f hmm-t score E-value -------- ------- ----- ----- ----- ----- ----- ------- [no hits above thresholds] Alignments of top-scoring domains: [no hits above thresholds] // Query: Rabbit4Lib.336.C1 465 1 773 nseq=2; minus strand; translated Scores for sequence family classification (score includes all domains): Model Description Score E-value N -------- ----------- ----- ------- --- zf-C2H2 Zinc finger, C2H2 type 65.5 1.1e-15 2 zf-BED BED zinc finger -0.1 3 1 C1_1 Phorbol esters/diacylglycerol binding domain -13.5 8.5 1 Parsed for domains: Model Domain seq-f seq-t hmm-f hmm-t score E-value -------- ------- ----- ----- ----- ----- ----- ------- zf-C2H2 1/2 8 31 .. 1 24 [] 34.7 2.2e-06 zf-C2H2 2/2 65 87 .. 1 24 [] 37.6 2.9e-07 zf-BED 1/1 47 88 .. 1 52 [] -0.1 3 C1_1 1/1 1 93 [. 1 55 [] -13.5 8.5 Alignments of top-scoring domains: zf-C2H2: domain 1 of 2, from 8 to 31: score 34.7, E = 2.2e-06 *->ykCpfdCgksFsrksnLkrHlrt.H<-* ykC+ +Cg++F+++snL +H+r +H Rabbit4Lib 8 YKCD-ECGERFKQSSNLIQHQRDsH 31 zf-C2H2: domain 2 of 2, from 65 to 87: score 37.6, E = 2.9e-07 *->ykCpfdCgksFsrksnLkrHlrtH<-* y+C+ +Cgk+Fs++s+L++H+++H Rabbit4Lib 65 YQCS-ECGKCFSQSSHLRQHMKVH 87 zf-BED: domain 1 of 1, from 47 to 88: score -0.1, E = 3 *->SkvWkhFtkve..eeedgkevegkakCkhCgkklsrkkksGTsnLir + v F+ e+ + e+ +C Cgk +s + s+L+ Rabbit4Lib 47 ARVLTLFSTRErxTGEKP------YQCSECGKCFSQS-----SHLRQ 82 HLrrkHp<-* H++ +H+ Rabbit4Lib 83 HMK-VHK 88 C1_1: domain 1 of 1, from 1 to 93: score -13.5, E = 8.5 *->HhFvhrwnfkqptfCdhCgell......................... +r ++p +Cd Cge+++++++ ++++++++++ ++ + Rabbit4Lib 1 ---XPR--VRKPYKCDECGERFkqssnliqhqrdshrgkaltsvmsv 42 ...............wgslgkqGlkCswCklnv....HkrChekVppeCg + + + + +++++ g ++Cs+C+ ++++++H r h+kV++e++ Rabbit4Lib 43 advsarvltlfstreRX-TGEKPYQCSECGKCFsqssHLRQHMKVHKEEK 91 cg<-* + Rabbit4Lib 92 PR 93 // Query: Rabbit4Lib.337.C1 206 1 379 nseq=2; minus strand; translated Scores for sequence family classification (score includes all domains): Model Description Score E-value N -------- ----------- ----- ------- --- [no hits above thresholds] Parsed for domains: Model Domain seq-f seq-t hmm-f hmm-t score E-value -------- ------- ----- ----- ----- ----- ----- ------- [no hits above thresholds] Alignments of top-scoring domains: [no hits above thresholds] // Query: Rabbit4Lib.339.C2 176 1 411 nseq=4; minus strand; translated Scores for sequence family classification (score includes all domains): Model Description Score E-value N -------- ----------- ----- ------- --- F-actin_cap_A F-actin capping protein alpha subunit 22.7 2.4e-10 1 Parsed for domains: Model Domain seq-f seq-t hmm-f hmm-t score E-value -------- ------- ----- ----- ----- ----- ----- ------- F-actin_cap_A 1/1 3 132 .. 1 279 [] 22.7 2.4e-10 Alignments of top-scoring domains: F-actin_cap_A: domain 1 of 1, from 3 to 132: score 22.7, E = 2.4e-10 *->ekveiankfIrhaPPGEfnEVvnDvRkllssddLLkeaileaiaqYN + +le++a Y Rabbit4Lib 3 -----------------------------------RPFCLEQMAFY- 13 vdqfvpVkisgvdesvlItkyNdlgNnrFyDpvnkksFtydHlrkEaedv + N+l Rabbit4Lib 14 -------------------ACNKLL------------------------- 19 epyeeeikkiikQwrdaldkqlkkYvsdhYpnDgtfaVYgksvSegveki e + + v + Rabbit4Lib 20 -----EWS----------------------LE--------VRV--E---- 28 tIcIvShkYnPkNFwNGrWRSewnytvepGSGnkeleGkisiqVHYYEDG ++ t+ + ++ G ++iqVHYYEDG Rabbit4Lib 29 ---------------------VYSHTFIT-----QVVGILKIQVHYYEDG 52 NVqLqsskdikatvqvssDlqsTAkeiikaIadaEtnyqnaldenystln NVqL+s+kdi+++ vs +q TAke+ik+++ aE++yq+a++eny+t++ Rabbit4Lib 53 NVQLVSHKDIQDSLTVSNEAQ-TAKEFIKIVEAAENEYQTAISENYQTMS 101 DttFKALRRqLPVTRtKINWnSkvksyRigke<-* DttFKALRRqLPVTRtKI+Wn k++sy+igke Rabbit4Lib 102 DTTFKALRRQLPVTRTKIDWN-KILSYKIGKE 132 // Query: Rabbit4Lib.339.C3 354 1 772 nseq=2; minus strand; translated Scores for sequence family classification (score includes all domains): Model Description Score E-value N -------- ----------- ----- ------- --- F-actin_cap_A F-actin capping protein alpha subunit 508.2 6.3e-149 1 Parsed for domains: Model Domain seq-f seq-t hmm-f hmm-t score E-value -------- ------- ----- ----- ----- ----- ----- ------- F-actin_cap_A 1/1 2 252 .. 1 279 [] 508.2 6.3e-149 Alignments of top-scoring domains: F-actin_cap_A: domain 1 of 1, from 2 to 252: score 508.2, E = 6.3e-149 *->ekveiankfIrhaPPGEfnEVvnDvRkllssddLLkeaileaiaqYN PP +DvR+ll++d+LL+e++++a+aqYN Rabbit4Lib 2 -------------PP-------SDVRLLLNNDNLLREGAAHAFAQYN 28 vdqfvpVkisgvdesvlItkyNdlgNnrFyDpvnkksFtydHlrkEaedv dqf+pVki+g+ ++vlIt+++dlgN++F+Dp+n + F++dHlrkEa+d+ Rabbit4Lib 29 LDQFTPVKIEGYEDQVLITEHGDLGNGKFLDPKNRICFKFDHLRKEATDP 78 epyeeeikkiikQwrdaldkqlkkYvsdhYpnDgtfaVYgksvSegveki +pye+e +i+ wr ++l++Yv++hYpn g+++VYgk++ +g+++i Rabbit4Lib 79 RPYEAEN--AIESWRSSVETALRAYVKEHYPN-GVCTVYGKKI-DGQQTI 124 tIcIvShkYnPkNFwNGrWRSewnytvepGSGnkeleGkisiqVHYYEDG ++cI+Sh+++ kNFwNGrWRSew++tv+p ++ G ++iqVHYYEDG Rabbit4Lib 125 IACIESHQFQAKNFWNGRWRSEWKFTVTP--SITQVVGILKIQVHYYEDG 172 NVqLqsskdikatvqvssDlqsTAkeiikaIadaEtnyqnaldenystln NVqL+s+kdi+++ vs +q TAke+ik+++ aE++yq+a++eny+t++ Rabbit4Lib 173 NVQLVSHKDIQDSLTVSNEAQ-TAKEFIKIVEAAENEYQTAISENYQTMS 221 DttFKALRRqLPVTRtKINWnSkvksyRigke<-* DttFKALRRqLPVTRtKI+Wn k++sy+igke Rabbit4Lib 222 DTTFKALRRQLPVTRTKIDWN-KILSYKIGKE 252 // Query: Rabbit4Lib.341.C1 1331 1 1098 nseq=2; minus strand; translated Scores for sequence family classification (score includes all domains): Model Description Score E-value N -------- ----------- ----- ------- --- Serpin Serpin (serine protease inhibitor) 483.6 1.5e-141 1 Parsed for domains: Model Domain seq-f seq-t hmm-f hmm-t score E-value -------- ------- ----- ----- ----- ----- ----- ------- Serpin 1/1 13 363 .. 1 398 [] 483.6 1.5e-141 Alignments of top-scoring domains: Serpin: domain 1 of 1, from 13 to 363: score 483.6, E = 1.5e-141 *->ldsralkLasantdFAfsLYkeLveskspdkNiffSPvSIssALAmL +d+ L++an +FA+ L k+L ++ +kN+ffSP+SIs+ALAm+ Rabbit4Lib 13 MDA----LSEANGTFALTLLKTLG--EDSSKNVFFSPMSISAALAMV 53 sLGAkgnTrtQilegLgFnltetseaeyadhklaihqgFqhLlqelnrpd +GAkgnT+ Q+ ++L+ n+t++++a d +hqgFq+Ll+e+nrp Rabbit4Lib 54 LMGAKGNTAAQMTQALSLNKTQGGGAG--D----VHQGFQSLLTEVNRPG 97 kelqlttgnaLFvdkslkLldeFledvkklYqsevfsvDFsdapeeAkkq ++ l+t+n+LF++k+ ++l +F ++++k+Yq+e++ +DF + +ee +k+ Rabbit4Lib 98 MQYLLRTANRLFGEKTWEFLSTFKDSCQKFYQAELEELDFMNSTEESRKH 147 INdwVekqTqGKIkdLlsdgsLDsdTvlvLVNyIyFKGkWkkpFdpenTr IN+wV+k T+ KI +Lls++s +s T+l+LVN+IyFKG+W+k Fd+e+T+ Rabbit4Lib 148 INSWVAKMTEDKITNLLSPNSMNSLTRLILVNAIYFKGNWEKQFDKERTQ 197 eedFhVdkkttVkVPMMksqlgtfryTeyfrdeeLnckVleLPYkgnata e++F V+k++ ++V+MM ++++tf+ ++++ e+ +++l LPY+g+++ Rabbit4Lib 198 ERPFKVSKNKEKPVQMM-FRKSTFK---VTYIGEIFTRILMLPYVGKELH 243 mfiLlPpdegkLeqvEaaLtpetlrkWt.lksmtkreveLyLPKFsIegs m+i+lP++ +L +vE++Lt+e + +Wt++++m++ ev++yLP+F++eg+ Rabbit4Lib 244 MIIMLPDEHIDLKTVEKELTYENFVEWTkPDMMDEEEVDVYLPRFKLEGN 293 ydLkdvLakLGitdlFsnskADLsgisededLkVSkavHKAvLevnEeGt +d+++vL+ LG+td+F+ AD+sg+s ++L++Sk+v K+++evnEeGt Rabbit4Lib 294 FDMEEVLRGLGMTDAFDQANADFSGMSSKRNLHLSKVVPKSFVEVNEEGT 343 EAaAATaaeivprsslplpelpvefkfdrPFLFlIrenpTgsiLFmGkVv EA++ATaa+ + ++e+p Rabbit4Lib 344 EAGGATAAIXDDA---------------------VFEDP----------- 361 nP<-* P Rabbit4Lib 362 QP 363 // Query: Rabbit4Lib.342.C1 702 1 473 nseq=2; minus strand; translated Scores for sequence family classification (score includes all domains): Model Description Score E-value N -------- ----------- ----- ------- --- KE2 KE2 family protein 138.9 9.3e-38 1 Prefoldin Prefoldin subunit -15.3 1.9 1 Parsed for domains: Model Domain seq-f seq-t hmm-f hmm-t score E-value -------- ------- ----- ----- ----- ----- ----- ------- Prefoldin 1/1 36 131 .. 1 122 [] -15.3 1.9 KE2 1/1 27 132 .. 1 106 [] 138.9 9.3e-38 Alignments of top-scoring domains: Prefoldin: domain 1 of 1, from 36 to 131: score -15.3, E = 1.9 *->lkqeiesLqaelaaLreaieeleksletlktlkkkeedegkevlvpl l+qe L+++ a+L+++++e +++tlk++++ + + + + Rabbit4Lib 36 LRQEQRGLASKAAELEMELNEHSLVIDTLKEVDE--TRKCYRMVG-- 78 gaglfvkaevkdtdkvlVdlGagyyvEksleeAieildkrieelekqlek g+ vE++ e l++++e+++k +e Rabbit4Lib 79 ----------------------GVLVERTVKEVLPALENNKEQIQKIIEP 106 leeelekLrdqittleanlqqvqqk<-* l+++l+ + +++++ + + + + + Rabbit4Lib 107 LTQQLQAKGKELNEFREKHNIRLMG 131 KE2: domain 1 of 1, from 27 to 132: score 138.9, E = 9.3e-38 *->QelinkfqqLqqqleklaeqikqletqlkEielvleELelldedtkv ++ i+ f++L+q+++ la++ ++le++l+E+ lv+++L+ +de++k+ Rabbit4Lib 27 EQVIAGFNRLRQEQRGLASKAAELEMELNEHSLVIDTLKEVDETRKC 73 YklvGgvLVkqdkeevkeeLeerketlekeiktLekqleklekeleelke Y++vGgvLV+++++ev++ Le +ke+++k i+ L++ql+ + kel+e++e Rabbit4Lib 74 YRMVGGVLVERTVKEVLPALENNKEQIQKIIEPLTQQLQAKGKELNEFRE 123 elqkllgsa<-* +++++l+++ Rabbit4Lib 124 KHNIRLMGE 132 // Query: Rabbit4Lib.345.C1 121 51 505 nseq=2; minus strand; translated Scores for sequence family classification (score includes all domains): Model Description Score E-value N -------- ----------- ----- ------- --- [no hits above thresholds] Parsed for domains: Model Domain seq-f seq-t hmm-f hmm-t score E-value -------- ------- ----- ----- ----- ----- ----- ------- [no hits above thresholds] Alignments of top-scoring domains: [no hits above thresholds] // Query: Rabbit4Lib.346.C1 414 61 621 nseq=3; minus strand; translated Scores for sequence family classification (score includes all domains): Model Description Score E-value N -------- ----------- ----- ------- --- DUF652 Protein of unknown function, DUF652 242.9 4.5e-69 1 Parsed for domains: Model Domain seq-f seq-t hmm-f hmm-t score E-value -------- ------- ----- ----- ----- ----- ----- ------- DUF652 1/1 79 177 .. 1 103 [] 242.9 4.5e-69 Alignments of top-scoring domains: DUF652: domain 1 of 1, from 79 to 177: score 242.9, E = 4.5e-69 *->mdCLyakvilciTdCVlaELEkLGpkyriAlkiakdprferlkCshe mdCLyak+i+ciTdCV+aE EkLG+kyr+Al+iakdprferl+C h Rabbit4Lib 79 MDCLYAKCIPCITDCVMAEIEKLGQKYRVALRIAKDPRFERLPCAH- 124 gkgtyADdClvervtqhkPhcYiVATnDrdLkrrIRKiPGvpimyvakhk kgtyADdClv+rvtqhk cYiVAT DrdLkrrIRKiPGvpimy+ +h+ Rabbit4Lib 125 -KGTYADDCLVQRVTQHK--CYIVATVDRDLKRRIRKIPGVPIMYISNHR 171 yviEkl<-* y iE++ Rabbit4Lib 172 YNIERM 177 // Query: Rabbit4Lib.347.C1 144 119 298 nseq=3; minus strand; translated Scores for sequence family classification (score includes all domains): Model Description Score E-value N -------- ----------- ----- ------- --- [no hits above thresholds] Parsed for domains: Model Domain seq-f seq-t hmm-f hmm-t score E-value -------- ------- ----- ----- ----- ----- ----- ------- [no hits above thresholds] Alignments of top-scoring domains: [no hits above thresholds] // Query: Rabbit4Lib.352.C1 338 1 516 nseq=2; minus strand; translated Scores for sequence family classification (score includes all domains): Model Description Score E-value N -------- ----------- ----- ------- --- NIPSNAP NIPSNAP 36.9 4.5e-07 1 Parsed for domains: Model Domain seq-f seq-t hmm-f hmm-t score E-value -------- ------- ----- ----- ----- ----- ----- ------- NIPSNAP 1/1 2 68 .. 1 105 [] 36.9 4.5e-07 Alignments of top-scoring domains: NIPSNAP: domain 1 of 1, from 2 to 68: score 36.9, E = 4.5e-07 *->yETClRtYtlkPgkmaeflerfaraiialqekhggelvGyFtseiGp + G+F+s+iG+ Rabbit4Lib 2 HA-----------------------------------SGGFFSQIGE 13 lnqvvhlwaydSlaaReavRaalaaDpeWleaavrravdldlIdsmesri l++v+hlway++l++Re++R a++ + +W +++v ++v+l ++ mesri Rabbit4Lib 14 LYVVHHLWAYKDLQSREETRNAAWRKRGW-DENVYYTVPL--VRHMESRI 60 lrPtpfSp<-* ++P +f Rabbit4Lib 61 MIPLKFHL 68 // Query: Rabbit4Lib.361.C1 1126 1 908 nseq=3; minus strand; translated Scores for sequence family classification (score includes all domains): Model Description Score E-value N -------- ----------- ----- ------- --- [no hits above thresholds] Parsed for domains: Model Domain seq-f seq-t hmm-f hmm-t score E-value -------- ------- ----- ----- ----- ----- ----- ------- [no hits above thresholds] Alignments of top-scoring domains: [no hits above thresholds] // Query: Rabbit4Lib.362.C1 820 1 501 nseq=4; minus strand; translated Scores for sequence family classification (score includes all domains): Model Description Score E-value N -------- ----------- ----- ------- --- Ribosomal_L32e Ribosomal protein L32 269.6 4.2e-77 1 Parsed for domains: Model Domain seq-f seq-t hmm-f hmm-t score E-value -------- ------- ----- ----- ----- ----- ----- ------- Ribosomal_L32e 1/1 36 145 .. 1 117 [] 269.6 4.2e-77 Alignments of top-scoring domains: Ribosomal_L32e: domain 1 of 1, from 36 to 145: score 269.6, E = 4.2e-77 *->kkpkFkRhesdRykRvgnqesWRKPrGidskvRrrfkGkisrimPkI +++kF+Rh+sdRy +++ ++WRKPrGid++vRrrfkG+i mP+I Rabbit4Lib 36 RTKKFIRHQSDRYVKIK--RNWRKPRGIDNRVRRRFKGQIL--MPNI 78 GYgSpkkvRgLhPSGyeevLVhNVkdLEaLdkCMqnketqaarIAStVGa GYgS+kk+++++PSG++++LVhNVk+LE+L+ M+nk ++a+IA++V++ Rabbit4Lib 79 GYGSNKKTKHMLPSGFRKFLVHNVKELEVLL--MCNKS-YCAEIAHNVSS 125 RKRieIverAeeLGIKVlNp<-* ++R++IverA++L+I+V+Np Rabbit4Lib 126 KNRKAIVERAAQLAIRVTNP 145 // Query: Rabbit4Lib.364.C1 1035 1 841 nseq=3; minus strand; translated Scores for sequence family classification (score includes all domains): Model Description Score E-value N -------- ----------- ----- ------- --- Proteasome Proteasome A-type and B-type 245.8 6e-70 1 Parsed for domains: Model Domain seq-f seq-t hmm-f hmm-t score E-value -------- ------- ----- ----- ----- ----- ----- ------- Proteasome 1/1 42 223 .. 1 194 [] 245.8 6e-70 Alignments of top-scoring domains: Proteasome: domain 1 of 1, from 42 to 223: score 245.8, E = 6e-70 *->vktGtTivGikgkdGVVlAaDkRatlGskllskdtveKifkiyddhi ktGtTi G+++kdG+Vl+aD+Rat+G +++k+ + Ki+ i +++i Rabbit4Lib 42 RKTGTTIAGVVYKDGIVLGADTRATEGMVVADKN-CSKIHFI-SPNI 86 gcafaGlaADartlvdyaraeaqlyrlrygepipvevLvkriadllqvyt +c++aG+aAD+ + ++++ ++++l++l++g+ ++v a+++++++ Rabbit4Lib 87 YCCGAGTAADTDMTTQLISSNLELHSLSTGRLPRVV-----TANRMLKQM 131 qysgrrPfgvslliaGvDekggPhLyqiDpsGsvieykdnatAiGgSGsq +++++++ g++l+++GvD++g PhLy+i p+Gs ++ +++ +G SGs Rabbit4Lib 132 LFRYQGYIGAALVLGGVDVTG-PHLYSIYPHGSTDKL--PYVTMG-SGSL 177 yAygvLEklykredmtleeaielavkAlkeaierdalsggnievavi<-* +A++v+E ++ r+dm++eea++l+ +A+ +++++d sg+ni+++vi Rabbit4Lib 178 AAMAVFEDKF-RPDMEEEEAKKLVSEAIAAGVFNDLGSGSNIDLCVI 223 // Query: Rabbit4Lib.366.C1 585 161 952 nseq=2; minus strand; translated Scores for sequence family classification (score includes all domains): Model Description Score E-value N -------- ----------- ----- ------- --- Biotin_lipoyl Biotin-requiring enzyme 95.1 1.4e-24 1 Biotin_carb_C Biotin carboxylase C-terminal domain -57.5 1.7 1 Parsed for domains: Model Domain seq-f seq-t hmm-f hmm-t score E-value -------- ------- ----- ----- ----- ----- ----- ------- Biotin_carb_C 1/1 1 40 [. 1 118 [] -57.5 1.7 Biotin_lipoyl 1/1 195 262 .. 1 74 [] 95.1 1.4e-24 Alignments of top-scoring domains: Biotin_carb_C: domain 1 of 1, from 1 to 40: score -57.5, E = 1.7 *->EcRInAEDPakgFflPspGritayrsPeeragGpGVRvDsggvyaGy Rabbit4Lib - ----------------------------------------------- - eIspyYDSmiaKlivwGedReeAiarMkrALkEfrIrGevkTNIpFLial M++AL++++IrG v++NI +L+++ Rabbit4Lib 1 --------------------------MEDALDNYVIRG-VAHNIALLREV 23 LedpdFlsGneGaFvtTkfld<-* + + +F++G+ ++Tkfl Rabbit4Lib 24 IINSRFVKGD----INTKFLS 40 Biotin_lipoyl: domain 1 of 1, from 195 to 262: score 95.1, E = 1.4e-24 *->keiksPmiGesvkegtvvevlVkvGDkVkaGqvlcevEaMKmemeip ++sPm+G++v+ v V++GD V++Gq +c++EaMKm++ ++ Rabbit4Lib 195 SILRSPMPGVVVA------VSVAPGDMVAEGQEICVIEAMKMQNSMT 235 ApvaGvvkeilvkeGdtVevGdpLaki<-* A ++G+vk++ + +GdtV +Gd+L+++ Rabbit4Lib 236 AGKTGKVKSVQCRAGDTVGEGDLLVEL 262 // Query: Rabbit4Lib.369.C1 136 35 346 nseq=2; minus strand; translated Scores for sequence family classification (score includes all domains): Model Description Score E-value N -------- ----------- ----- ------- --- ATP-synt_Eps Mitochondrial ATP synthase epsilon chain 85.7 9.1e-22 1 Parsed for domains: Model Domain seq-f seq-t hmm-f hmm-t score E-value -------- ------- ----- ----- ----- ----- ----- ------- ATP-synt_Eps 1/1 14 62 .. 1 50 [] 85.7 9.1e-22 Alignments of top-scoring domains: ATP-synt_Eps: domain 1 of 1, from 14 to 62: score 85.7, E = 9.1e-22 *->aaWRkAGltYiqYSnIAAqtVRqaLKpElkanavlkrskselkltkW a+WR+AGl+Yi+YS+I+A++VR LK+E++ana k+ +s +k++k+ Rabbit4Lib 14 AYWRQAGLSYIRYSQICAKAVRMXLKTEFRANAE-KTAGSSVKIVKV 59 kNG<-* k++ Rabbit4Lib 60 KKE 62 // Query: Rabbit4Lib.372.C1 297 1 589 nseq=5; minus strand; translated Scores for sequence family classification (score includes all domains): Model Description Score E-value N -------- ----------- ----- ------- --- ETC_C1_NDUFA4 ETC complex I subunit conserved region 209.5 5.1e-59 1 Parsed for domains: Model Domain seq-f seq-t hmm-f hmm-t score E-value -------- ------- ----- ----- ----- ----- ----- ------- ETC_C1_NDUFA4 1/1 82 181 .. 1 112 [] 209.5 5.1e-59 Alignments of top-scoring domains: ETC_C1_NDUFA4: domain 1 of 1, from 82 to 181: score 209.5, E = 5.1e-59 *->rkarIYrPArnamQSGkartkkWkleFdrasekGaRwenPLMGWtst rk+rI++PArn+mQSG+++tkkWk+eFd ++e RwenPLMGW+st Rabbit4Lib 82 RKVRIFVPARNNMQSGVNNTKKWKMEFD-TRE---RWENPLMGWAST 124 gDplsngveLtFeTkEeAiaFAerqgweYdVeepkapklkpKaYadNPDv +Dplsn ++LtF+ kE+A+aFAe++gw+YdVee+k+pk+k+K+Y+ Rabbit4Lib 125 ADPLSN-MVLTFSAKEDAVAFAEKNGWSYDVEERKVPKPKSKSYGXK--- 170 EGPAFswnrrtrlev<-* F+ ++++ ++ Rabbit4Lib 171 ---LFLEQKNKS-IH 181 // Query: Rabbit4Lib.372.C2 679 210 848 nseq=2; minus strand; translated Scores for sequence family classification (score includes all domains): Model Description Score E-value N -------- ----------- ----- ------- --- MRG MRG 199.3 6e-56 1 Parsed for domains: Model Domain seq-f seq-t hmm-f hmm-t score E-value -------- ------- ----- ----- ----- ----- ----- ------- MRG 1/1 4 212 .. 1 542 [] 199.3 6e-56 Alignments of top-scoring domains: MRG: domain 1 of 1, from 4 to 212: score 199.3, E = 6e-56 *->ssWDEwVpVGEEedRiLKytEENlklQreLakkAaarlqkttsklke + + Ky+++Nl++QreL+k + q + + Rabbit4Lib 4 NGFQRAEY--------XKYVDTNLQKQRELQK----ANQEQYAE--- 35 arkkkrlslPgvdsslkGkrseesesndskspttssspktkseegGHVed k+r+++Pg + ++ Rabbit4Lib 36 --GKMRGAAPG---------------------------------K---KT 47 ptadkddtttvakkkkkkkpengnddstspftpDFGsfkkldeAlAktrk ++ +++++++++kk+k+k+p+ng+++sts + Rabbit4Lib 48 SGLQQKNVEVKTKKNKQKTPGNGDGGSTS--------------------E 77 peePtakKrkrrSedrsslrssDaaGNRsRDNSsGkkKekdkSGDkrldG +++P++kKr Rabbit4Lib 78 TPQPPRKKR----------------------------------------- 86 eRrrvaekflrvtpkDvertdssplvEeednfaaempapkikieIPeeLK +r+d p+vE+e++f++++ ++k++IPeeLK Rabbit4Lib 87 -----------------ARVD--PTVENEETFMNRV---EVKVKIPEELK 114 klLvDDWeyvtrnkklvaLPakvtVdtILedYlkhiAVelaisikeDSSR ++LvDDW+++tr+k+l++LPak++Vd+ILedY+++ Rabbit4Lib 115 PWLVDDWDLITRQKQLFYLPAKKNVDSILEDYANY--------------- 149 aRnthsRparkmsreelnseskvdalkEvvaGLriYFdvcLGnmLLYkfE k+s ++n+++k++a++EvvaG+++YF+v+LG++LLYkfE Rabbit4Lib 150 ----------KKS--RGNTDNKEYAVNEVVAGIKEYFNVMLGTQLLYKFE 187 RaQYkEllkkkFFLtDdNmkncslllNkSyEyinPSgdeeLisLrgstpd R+QY+E+l++ + d Rabbit4Lib 188 RPQYAEILAD-------------------------------------HLD 200 TAnCDRLsesngspgpllgqqeyeaqLqKcllyiEKntPvHarsssaipy + Rabbit4Lib 201 A------------------------------------------------- 201 TaayklpvemrGFlnEtlsWkLlsdnsPpkdqkPlepSqiYGAeHLLRLf ++Sq+YGA Rabbit4Lib 202 -----------------------------------PMSQVYGAH------ 210 VkLPelLsytnmdeqslerLlkhlddFLkfLakNhdeyFsGesdY<-* + Y Rabbit4Lib 211 ---------------------------------------I----Y 212 // Query: Rabbit4Lib.374.C1 196 364 564 nseq=2; minus strand; translated Scores for sequence family classification (score includes all domains): Model Description Score E-value N -------- ----------- ----- ------- --- [no hits above thresholds] Parsed for domains: Model Domain seq-f seq-t hmm-f hmm-t score E-value -------- ------- ----- ----- ----- ----- ----- ------- [no hits above thresholds] Alignments of top-scoring domains: [no hits above thresholds] // Query: Rabbit4Lib.376.C1 286 1 496 nseq=2; minus strand; translated Scores for sequence family classification (score includes all domains): Model Description Score E-value N -------- ----------- ----- ------- --- [no hits above thresholds] Parsed for domains: Model Domain seq-f seq-t hmm-f hmm-t score E-value -------- ------- ----- ----- ----- ----- ----- ------- [no hits above thresholds] Alignments of top-scoring domains: [no hits above thresholds] // Query: Rabbit4Lib.379.C1 621 111 790 nseq=2; minus strand; translated Scores for sequence family classification (score includes all domains): Model Description Score E-value N -------- ----------- ----- ------- --- [no hits above thresholds] Parsed for domains: Model Domain seq-f seq-t hmm-f hmm-t score E-value -------- ------- ----- ----- ----- ----- ----- ------- [no hits above thresholds] Alignments of top-scoring domains: [no hits above thresholds] // Query: Rabbit4Lib.379.C2 229 879 1082 nseq=2; translated Scores for sequence family classification (score includes all domains): Model Description Score E-value N -------- ----------- ----- ------- --- [no hits above thresholds] Parsed for domains: Model Domain seq-f seq-t hmm-f hmm-t score E-value -------- ------- ----- ----- ----- ----- ----- ------- [no hits above thresholds] Alignments of top-scoring domains: [no hits above thresholds] // Query: Rabbit4Lib.380.C1 761 1 776 nseq=2; minus strand; translated Scores for sequence family classification (score includes all domains): Model Description Score E-value N -------- ----------- ----- ------- --- bZIP_2 Basic region leucine zipper 24.6 0.0024 1 bZIP_1 bZIP transcription factor 13.4 0.035 1 HALZ Homeobox associated leucine zipper -1.0 3.7 1 Parsed for domains: Model Domain seq-f seq-t hmm-f hmm-t score E-value -------- ------- ----- ----- ----- ----- ----- ------- bZIP_2 1/1 140 194 .. 1 57 [] 24.6 0.0024 bZIP_1 1/1 140 204 .. 1 65 [] 13.4 0.035 HALZ 1/1 172 205 .. 1 45 [] -1.0 3.7 Alignments of top-scoring domains: bZIP_2: domain 1 of 1, from 140 to 194: score 24.6, E = 0.0024 *->kddeyrdrRrlrNneAAkrsReKkKqreeeleervkeLeeeNaqLLk +d + ++R+ AA+ ++ K++e+e+e rv +L eeN++L Rabbit4Lib 140 EDRGRTRKRKQSGQCAARAGKQRMKEKEQENERRVAQLAEENERL-- 184 rqkveqLekE<-* +q++e+L++E Rabbit4Lib 185 KQEIERLTRE 194 bZIP_1: domain 1 of 1, from 140 to 204: score 13.4, E = 0.035 *->ekelKrerRkqkNReAArrsRlRKqaeieeLeekveeLeaeNkaLrk e + + +Rkq+ AAr +R +++ +e e++v++L +eN++L+ Rabbit4Lib 140 EDRGRTRKRKQSGQCAARAGKQRMKEKEQENERRVAQLAEENERLKQ 186 elerLkkevakLksenee<-* e+erL+ ev+ + + + Rabbit4Lib 187 EIERLTREVEATRRALID 204 HALZ: domain 1 of 1, from 172 to 205: score -1.0, E = 3.7 *->KQLErDYelLKrcydsLkeendsLqkendeLrAevlslkeklqde<- r +L een++L++e ++L ev ++ l+d+ Rabbit4Lib 172 -----------RRVAQLAEENERLKQEIERLTREVEATRRALIDR 205 * Rabbit4Lib - - // Query: Rabbit4Lib.381.C1 703 1 479 nseq=4; minus strand; translated Scores for sequence family classification (score includes all domains): Model Description Score E-value N -------- ----------- ----- ------- --- Serpin Serpin (serine protease inhibitor) -219.7 1.7 1 Parsed for domains: Model Domain seq-f seq-t hmm-f hmm-t score E-value -------- ------- ----- ----- ----- ----- ----- ------- Serpin 1/1 1 156 [. 1 398 [] -219.7 1.7 Alignments of top-scoring domains: Serpin: domain 1 of 1, from 1 to 156: score -219.7, E = 1.7 *->ldsralkLasantdFAfsLYkeLveskspdkNiffSPvSIssALAmL Rabbit4Lib - ----------------------------------------------- - sLGAkgnTrtQilegLgFnltetseaeyadhklaihqgFqhLlqelnrpd Rabbit4Lib - -------------------------------------------------- - kelqlttgnaLFvdkslkLldeFledvkklYqsevfsvDFsdapeeAkkq lY + Rabbit4Lib 1 ----------------------------XLYPPS---------------- 6 INdwVekqTqGKIkdLlsdgsLDsdTvlvLVNyIyFKGkWkkpFdpenTr + Rabbit4Lib 7 ------------------G------------------------------- 7 eedFhVdkkttVkVPMMksqlgtfryTeyfrdeeLnckVleLPYkgnata + + lg+ + + Rabbit4Lib 8 ----------------I-FLLGMSI-----------------------IF 17 mfiLlPpdegkLeqvEaaLtpetlrkWtlksmtkreveLyLPKFsIegsy ++ L P + L +E+ Lt+e ++ + +++++ + L++PK++++ + Rabbit4Lib 18 FLPLRP--TQNLTLIEESLTSEFIHDI-DRELKTIQAALSIPKLKLSFEG 64 dLkdvLakLGitdlFsnskADLsgisededLkVSkavHKAvLevnEeGtE ++ L++ ++ lF + +D+s+i++ ++k++++ H A e+nE+G Rabbit4Lib 65 EVTKALQEIKLQPLFES--PDFSKITGK-PIKLTHVEHRAGFEWNEDG-- 109 AaAATaaeivprsslplpelpvefkfdrPFLFlIrenpTgsiLFmGkVvn Aa++++ e+ p+ l ++l ++++PF+F++r+++Tg++LF+Gk+ + Rabbit4Lib 110 AATSPGPEVQPA-RLA-FSL--DYHLNQPFIFVLRDSDTGALLFVGKILD 155 P<-* P Rabbit4Lib 156 P 156 // Query: Rabbit4Lib.381.C2 1040 138 887 nseq=3; minus strand; translated Scores for sequence family classification (score includes all domains): Model Description Score E-value N -------- ----------- ----- ------- --- Serpin Serpin (serine protease inhibitor) -74.7 1.1e-06 1 Parsed for domains: Model Domain seq-f seq-t hmm-f hmm-t score E-value -------- ------- ----- ----- ----- ----- ----- ------- Serpin 1/1 25 250 .] 1 398 [] -74.7 1.1e-06 Alignments of top-scoring domains: Serpin: domain 1 of 1, from 25 to 250: score -74.7, E = 1.1e-06 *->ldsralkLasantdFAfsLYkeLveskspdkNiffSPvSIssALAmL + + +kLa a ++F+ +LY++ ++ +sp+ N+++SP+S+++AL+ L Rabbit4Lib 25 VPV--NKLAAAVSNFGYDLYRQRSA-ESPTANVLLSPLSVATALSAL 68 sLGAkgnTrtQilegLgFnltetseaeyadhklaihqgFqhLlqelnrpd sLGA T + i+ +L ++l + + ih +++Ll +++ p+ Rabbit4Lib 69 SLGAEQRTESLIQRALYYDLISNP--D-------IHGTYKELLAAVTAPQ 109 kelqlttgnaLFvdkslkLldeFledvkklYqsevfsvDFsdapeeAkkq k l++++++ + l ++ +F++ +k Y++ + + + +++ Rabbit4Lib 110 KN--LKSASRIIFERKLRIKSSFVAPLEKAYGTRPRVLSGTL--XLDLQE 155 INdwVekqTqGKIkdLlsdgsLDsdTvlvLVNyIyFKGkWkkpFdpenTr N wV q +GK+ + + ++sd L+ yFKG+W ++Fd ++T Rabbit4Lib 156 LNGWVQAQMKGKVARSARE--VPSDISIFLLGVAYFKGQWVTKFDSRKTS 203 eedFhVdkkttVkVPMMksqlgtfryTeyfrdeeLnckVleLPYkgnata +dFh+d+ +tV+VPMM+ + + y d + nck+ +LP++g Rabbit4Lib 204 LQDFHLDEERTVRVPMMSDPKAIYX---YGLDFDFNCKIAQLPLTGS--- 247 mfiLlPpdegkLeqvEaaLtpetlrkWtlksmtkreveLyLPKFsIegsy Rabbit4Lib - -------------------------------------------------- - dLkdvLakLGitdlFsnskADLsgisededLkVSkavHKAvLevnEeGtE Rabbit4Lib - -------------------------------------------------- - AaAATaaeivprsslplpelpvefkfdrPFLFlIrenpTgsiLFmGkVvn + ++ Rabbit4Lib 248 -----------M------------------------SF------------ 250 P<-* Rabbit4Lib - - - // Query: Rabbit4Lib.388.C1 Scores for sequence family classification (score includes all domains): Model Description Score E-value N -------- ----------- ----- ------- --- [no hits above thresholds] Parsed for domains: Model Domain seq-f seq-t hmm-f hmm-t score E-value -------- ------- ----- ----- ----- ----- ----- ------- [no hits above thresholds] Alignments of top-scoring domains: [no hits above thresholds] // Query: Rabbit4Lib.388.C2 66 1 57 nseq=2; translated Scores for sequence family classification (score includes all domains): Model Description Score E-value N -------- ----------- ----- ------- --- [no hits above thresholds] Parsed for domains: Model Domain seq-f seq-t hmm-f hmm-t score E-value -------- ------- ----- ----- ----- ----- ----- ------- [no hits above thresholds] Alignments of top-scoring domains: [no hits above thresholds] // Query: Rabbit4Lib.390.C1 711 1 850 nseq=2; minus strand; translated Scores for sequence family classification (score includes all domains): Model Description Score E-value N -------- ----------- ----- ------- --- [no hits above thresholds] Parsed for domains: Model Domain seq-f seq-t hmm-f hmm-t score E-value -------- ------- ----- ----- ----- ----- ----- ------- [no hits above thresholds] Alignments of top-scoring domains: [no hits above thresholds] // Query: Rabbit4Lib.394.C1 145 1 152 nseq=2; minus strand; translated Scores for sequence family classification (score includes all domains): Model Description Score E-value N -------- ----------- ----- ------- --- [no hits above thresholds] Parsed for domains: Model Domain seq-f seq-t hmm-f hmm-t score E-value -------- ------- ----- ----- ----- ----- ----- ------- [no hits above thresholds] Alignments of top-scoring domains: [no hits above thresholds] // Query: Rabbit4Lib.396.C2 724 1 523 nseq=5; minus strand; translated Scores for sequence family classification (score includes all domains): Model Description Score E-value N -------- ----------- ----- ------- --- [no hits above thresholds] Parsed for domains: Model Domain seq-f seq-t hmm-f hmm-t score E-value -------- ------- ----- ----- ----- ----- ----- ------- [no hits above thresholds] Alignments of top-scoring domains: [no hits above thresholds] // Query: Rabbit4Lib.396.C3 1130 1 925 nseq=4; minus strand; translated Scores for sequence family classification (score includes all domains): Model Description Score E-value N -------- ----------- ----- ------- --- HSP70 Hsp70 protein 242.2 7.2e-69 1 Parsed for domains: Model Domain seq-f seq-t hmm-f hmm-t score E-value -------- ------- ----- ----- ----- ----- ----- ------- HSP70 1/1 1 308 [] 1 620 [] 242.2 7.2e-69 Alignments of top-scoring domains: HSP70: domain 1 of 1, from 1 to 308: score 242.2, E = 7.2e-69 *->viGIDLGTTNScVAVmeggkpevIaNaeGnRtTPSvVAFtkkGERLV + Rabbit4Lib 1 --------------------------------------YPRV----- 4 GqaAKrQavtNpeNTvfsvKRlIGRrFddpeVqkdikhvPykvvkdsngd R Rabbit4Lib 5 ------------------------R------------------------- 5 awveveylGkkktftPeeISAmvLqKmKetAEayLGekVtkAVITVPAYF Rabbit4Lib - -------------------------------------------------- - NDaQRQATKDAGrIAGLnVlRIiNEPTAAALAYGLDKkdlpeeekernil Rabbit4Lib - -------------------------------------------------- - VfDLGGGTFDVSiLeigdGVFEVkaTnGDThLGGeDFDnrlvdhlveeFk Rabbit4Lib - -------------------------------------------------- - kkegiDlskDkrAlqRLreAAEKAKieLSsssqTeinLpfitadadGPkh +k+++D+s++krA++RLr+A+E+AK++LSs +T+++++++++++ G ++ Rabbit4Lib 6 RKHKKDISENKRAVRRLRTACERAKRTLSS--STQASIEIDSLYE-G-ID 51 lsetLtRAkFEeLvadLfeRtlePvekaLkDAklsksdIdeVvLVGGSTR +++++tRA+FEeL+adLf+ tl+PvekaL+DAkl+ks+I+++vLVGGSTR Rabbit4Lib 52 FYTSITRARFEELNADLFRGTLDPVEKALRDAKLDKSQIHDIVLVGGSTR 101 IPkVqelVkefFGdGKePskgvNPDEAVAiGAAvQaGVLsG..seeVkDv IPk+q+l+++fF+ GKe++k++NPDEAVA+GAAvQa++LsG++se V+D+ Rabbit4Lib 102 IPKIQKLLQDFFN-GKELNKSINPDEAVAYGAAVQAAILSGdkSENVQDL 150 lLLDVtPLSLGIETlGGvmtklIeRNTTIPTkksqiFSTaaDNQtaVeIq lLLDVtPLSLGIET+GGvmt lI+RNTTIPTk q+F+T++DNQ++V Iq Rabbit4Lib 151 LLLDVTPLSLGIETAGGVMTVLIKRNTTIPTKQTQTFTTYSDNQPGVLIQ 200 VlQGERelakDNklLGqFeLdGIpPAPrGvPqIEVtFdIDANGIlnVsAk V++GER+++kDN+lLG+FeL+GIpPAPrGvPqIEVtFdIDANGIlnVsA+ Rabbit4Lib 201 VYEGERAMTKDNNLLGKFELTGIPPAPRGVPQIEVTFDIDANGILNVSAV 250 DkgtgkeqkItItnssgrLsddEIerMvkdAEkyaeeDkkrkeriEakNe Dk+tgke+kItIt + +++IerMv++AEky+ Rabbit4Lib 251 DKSTGKENKITITKTGP-FEQEDIERMVQEAEKYK--------------- 284 aEsyvystekslkeeklgdklseadkekiekkvedaiewLkealegedda lk e a+ + v + L+ + Rabbit4Lib 285 -----------LKME--------AEG----TGVF--QNSLESYA---F-- 304 ekeeikakteeLqkvvqkigekmyq<-* m + Rabbit4Lib 305 ---------------------NMKA 308 // Query: Rabbit4Lib.396.C4 2599 35 1951 nseq=30; minus strand; translated Scores for sequence family classification (score includes all domains): Model Description Score E-value N -------- ----------- ----- ------- --- HSP70 Hsp70 protein 1416.7 0 1 Cytochrom_B562 Cytochrome b562 -34.9 3.7 1 Hydantoinase_A Hydantoinase/oxoprolinase -123.5 2.4 1 MreB_Mbl MreB/Mbl protein -223.9 0.0079 1 Parsed for domains: Model Domain seq-f seq-t hmm-f hmm-t score E-value -------- ------- ----- ----- ----- ----- ----- ------- Cytochrom_B562 1/1 223 322 .. 1 108 [] -34.9 3.7 Hydantoinase_A 1/1 122 376 .. 1 394 [] -123.5 2.4 MreB_Mbl 1/1 1 377 [. 1 330 [] -223.9 0.0079 HSP70 1/1 1 604 [. 1 620 [] 1416.7 0 Alignments of top-scoring domains: Cytochrom_B562: domain 1 of 1, from 223 to 322: score -34.9, E = 3.7 *->adLkdnM.nqlklnfkqlaeAdDvaemkealdklraaaedsqkgeyP +d + M n +++fk + +D+ e k a+ +lr a e +++ + Rabbit4Lib 223 EDFDNRMvNHFIAEFKRKHK-KDISENKRAVRRLRTACERAKRT-LS 267 pkledKsedspEfKNdYreGfdkLi....velDkakalaeeGnLdeAKaa ++ +s E++ eG d ++ ++ + +a++ G Ld + +a Rabbit4Lib 268 SST----QASIEID-SLYEGIDFYTsitrARFEELNADLFRGTLDPVEKA 312 akevddiRneYHdKyr<-* +++ + dK Rabbit4Lib 313 LRDAKL------DKSQ 322 Hydantoinase_A: domain 1 of 1, from 122 to 376: score -123.5, E = 2.4 *->RtvTavlNAyLsPivrrylealedalkerGikaplmvmqSDGGLvsa + +AyL + v + + + +++ + + ++ G+ ++ Rabbit4Lib 122 -----IAEAYLGKTVTNAVVTVPAYFND----SQRQATKDAGTIAGL 159 eeArrkPvetilSGPAAGvvGAayTlgrlaGlk.naIvfDmGGTSTDvsl + + i AA + + G ++n++ fD GG ++Dvs+ Rabbit4Lib 160 N--VL---RIINEPTAAAIAYGLD---KKVGAErNVLIFDLGGGTFDVSI 201 ..iidGepeissegevvgvHhGRvKGgGyptrvpmldirtvgaGGGSivw +i dG +e+ s++ +H gG + +m+ i+ Rabbit4Lib 202 ltIEDGIFEVKSTAGD--THL-----GGEDFDNRMVNHF--------IA- 235 wvddggalrvGPeSaGadPgplAAaYPfleLeknrprgldeiiQpTkFFV + + ++ + e+ +a+ Rabbit4Lib 236 EFKRKHKKDIS-ENKRAVRRL----------------------------- 255 rsgeLeEreacygkGGeplTvTDAn..lvLGrlnpedflkifGPgGdmkl r ac + ++ + T A ++ + +++++ Rabbit4Lib 256 -------RTACERAKRTLSSSTQASieIDSLYEGIDFYT----------- 287 dveaArrafeeLAdplgls.veevAegilrianetmarairllGeyteWd + + + ee+ + r + + +a+r+ Rabbit4Lib 288 --------------SITRArFEELNADLFRGTLDPVEKALRDA------- 316 eAsriGAelLgrlmgeeFcaVKrvarNmAdLlFfegkelkllaesverGl +l Rabbit4Lib 317 ------------------------------------------------KL 318 dprdfplvafGGaG...plhaaelAeelGikeViippypgVlsAvGall. d++ ++ +++ G++++ p + l + ++ ke +p+ + A+Ga+++ Rabbit4Lib 319 DKSQIHDIVLVGGStriPKIQKLLQDFFNGKELNKSINPDEAVAYGAAVq 368 .Advraev<-* A ++++ Rabbit4Lib 369 aAILSGDK 376 MreB_Mbl: domain 1 of 1, from 1 to 377: score -223.9, E = 0.0079 *->skDiGIDLGTANTLV..YVkGkG.IVLnE......PSVVAintk... IDLGT + V+ ++ Gk +I+ n ++++++PS VA +++ Rabbit4Lib 1 -----IDLGTTYSCVgvFQHGKVeIIANDqgnrttPSYVAFTDTerl 42 .............tkkvlAVGeEAKkMlGkTPgnIvAiRPLkDG...VIA ++ +++ ++t++v +AK+ +G+ ++ v+ +k+ + V+ Rabbit4Lib 43 igdaaknqvamnpTNTVF----DAKRLIGRRFDDAVVQSDMKHWpfmVVN 88 Df..................evTEaMLKyFIkkvhgarrslskPrvvICv D ++++ + + ++++++ +e M +k + a + v+ v Rabbit4Lib 89 DAgrpkvqveykgetksfypEEVSSMVLTKMKEIAEAYLGKTVTNAVVTV 138 PsgiTeVERRAvkeaaknAGAreVfLIEEPmAAAIGAGLP..VeEPtGnM P + R+A k+a+ AG + +I EP AAAI GL+++V + + + Rabbit4Lib 139 PAYFNDSQRQATKDAGTIAGLNVLRIINEPTAAAIAYGLDkkVGAERNVL 188 VVDIGGGTTEvAVISLG.GIVtskS....vRVAGDelDeaIikY....iR + D GGGT +v+++ +GI + kS+ ++ +G ++D +++ + + Rabbit4Lib 189 IFDLGGGTFDVSILTIEdGIFEVKStagdTHLGGEDFDNRMVNHfiaeFK 238 kkYnLlIGE........rTA.ErIKieIGsAypdeeeeelkmeIrGRDlv +k++ I E+++ ++ rTA Er K ++ s + e G D Rabbit4Lib 239 RKHKKDISEnkravrrlRTAcERAKRTLSSSTQASIEI--DSLYEGIDFY 286 tGLPktieisseEvreALkepvsaIveavkevLEkTPPELAaDIvdrGIv t i+ + e ++ + + ++ v ++L + + + I d Iv Rabbit4Lib 287 T------SITRARFEELNADLFRGTLDPVEKALRDAKLD-KSQIHD--IV 327 LTGGGALLrGLDkllseeTglP.ViiAedPLtCVAlGTGkaLenidklkr L GG ++ + kll++ ++ ++ + +P ++VA G+ + k+ Rabbit4Lib 328 LVGGSTRIPKIQKLLQDFFNGKeLNKSINPDEAVAYGAAVQAAILSGDKS 377 <-* Rabbit4Lib - - HSP70: domain 1 of 1, from 1 to 604: score 1416.7, E = 0 *->viGIDLGTTNScVAVmeggkpevIaNaeGnRtTPSvVAFtkkGERLV IDLGTT+ScV+V+++gk+e+IaN++GnRtTPS+VAFt++ ERL+ Rabbit4Lib 1 ---IDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDT-ERLI 43 GqaAKrQavtNpeNTvfsvKRlIGRrFddpeVqkdikhvPykvvkdsngd G+aAK+Q+++Np+NTvf++KRlIGRrFdd +Vq+d+kh+P+ vv+d g Rabbit4Lib 44 GDAAKNQVAMNPTNTVFDAKRLIGRRFDDAVVQSDMKHWPFMVVND-AGR 92 awveveylGkkktftPeeISAmvLqKmKetAEayLGekVtkAVITVPAYF ++v+vey+G++k f Pee+S+mvL+KmKe+AEayLG++Vt+AV+TVPAYF Rabbit4Lib 93 PKVQVEYKGETKSFYPEEVSSMVLTKMKEIAEAYLGKTVTNAVVTVPAYF 142 NDaQRQATKDAGrIAGLnVlRIiNEPTAAALAYGLDKkdlpeeekernil ND+QRQATKDAG+IAGLnVlRIiNEPTAAA+AYGLDKk + ern+l Rabbit4Lib 143 NDSQRQATKDAGTIAGLNVLRIINEPTAAAIAYGLDKKVGA----ERNVL 188 VfDLGGGTFDVSiLeigdGVFEVkaTnGDThLGGeDFDnrlvdhlveeFk +fDLGGGTFDVSiL+i+dG+FEVk+T+GDThLGGeDFDnr+v+h+++eFk Rabbit4Lib 189 IFDLGGGTFDVSILTIEDGIFEVKSTAGDTHLGGEDFDNRMVNHFIAEFK 238 kkegiDlskDkrAlqRLreAAEKAKieLSsssqTeinLpfitadadGPkh +k+++D+s++krA++RLr+A+E+AK++LSs +T+++++++++++ G ++ Rabbit4Lib 239 RKHKKDISENKRAVRRLRTACERAKRTLSS--STQASIEIDSLYE-G-ID 284 lsetLtRAkFEeLvadLfeRtlePvekaLkDAklsksdIdeVvLVGGSTR +++++tRA+FEeL+adLf+ tl+PvekaL+DAkl+ks+I+++vLVGGSTR Rabbit4Lib 285 FYTSITRARFEELNADLFRGTLDPVEKALRDAKLDKSQIHDIVLVGGSTR 334 IPkVqelVkefFGdGKePskgvNPDEAVAiGAAvQaGVLsG..seeVkDv IPk+q+l+++fF+ GKe++k++NPDEAVA+GAAvQa++LsG++se V+D+ Rabbit4Lib 335 IPKIQKLLQDFFN-GKELNKSINPDEAVAYGAAVQAAILSGdkSENVQDL 383 lLLDVtPLSLGIETlGGvmtklIeRNTTIPTkksqiFSTaaDNQtaVeIq lLLDVtPLSLGIET+GGvmt lI+RNTTIPTk q+F+T++DNQ++V Iq Rabbit4Lib 384 LLLDVTPLSLGIETAGGVMTVLIKRNTTIPTKQTQTFTTYSDNQPGVLIQ 433 VlQGERelakDNklLGqFeLdGIpPAPrGvPqIEVtFdIDANGIlnVsAk V++GER+++kDN+lLG+FeL+GIpPAPrGvPqIEVtFdIDANGIlnVsA+ Rabbit4Lib 434 VYEGERAMTKDNNLLGKFELTGIPPAPRGVPQIEVTFDIDANGILNVSAV 483 DkgtgkeqkItItnssgrLsddEIerMvkdAEkyaeeDkkrkeriEakNe Dk+tgke+kItItn++grLs+++IerMv++AEky++eD+k+++++ kN+ Rabbit4Lib 484 DKSTGKENKITITNDKGRLSKEDIERMVQEAEKYKAEDEKQRDKVSSKNS 533 aEsyvystekslkeeklgdklseadkekiekkvedaiewLkealegedda +Esy+++++ ++++ekl++k+ ++dk+ki +k+++ i+wL+++ ++a Rabbit4Lib 534 LESYAFNMKATVEDEKLQGKINDEDKQKILDKCNEIINWLDKN----QTA 579 ekeeikakteeLqkvvqkigekmyq<-* ekee++++++eL+kv+++i++k+yq Rabbit4Lib 580 EKEEFEHQQKELEKVCNPIITKLYQ 604 // Query: Rabbit4Lib.396.C5 687 50 887 nseq=4; minus strand; translated Scores for sequence family classification (score includes all domains): Model Description Score E-value N -------- ----------- ----- ------- --- HSP70 Hsp70 protein 192.6 6.3e-54 1 FtsA Cell division protein FtsA -61.7 7.6 1 MreB_Mbl MreB/Mbl protein -274.7 2.3 1 Parsed for domains: Model Domain seq-f seq-t hmm-f hmm-t score E-value -------- ------- ----- ----- ----- ----- ----- ------- FtsA 1/1 6 183 .. 1 208 [] -61.7 7.6 MreB_Mbl 1/1 4 275 .. 1 330 [] -274.7 2.3 HSP70 1/1 6 280 .] 1 620 [] 192.6 6.3e-54 Alignments of top-scoring domains: FtsA: domain 1 of 1, from 6 to 183: score -61.7, E = 7.6 *->vvllDIGggttdvavgeng.........................alg +v++D+G++ +v v++ g+ + ++++++++++ +++++ +g Rabbit4Lib 6 AVGIDLGTTYSCVGVFQHGkveiiandqgnrttpsyvaftdterLIG 52 hisvigvGgnhvTnGikkGvIvnIediaqslrtaveeAEriKgkkygsa. + +v+ n +Tn +v +A r+ g++ +a Rabbit4Lib 53 DAAKNQVAMN-PTN-------------------TVFDAKRLIGRRFDDAv 82 .........yvgisGssiksansngmiaipsvGg.ppreisredlarvIe +++ ++ ++ +n+ g ++ + +++++ + e+++ + Rabbit4Lib 83 vqsdmkhwpFM--------VVNDAGRPKVQVEYKgETKSFYPEEVSSMVL 124 aRvevsipdrEIlhlvPqefivDgqdelkdpiGmsgvlRLeagvvLtGGa + + EI + +v ++ + p + Rabbit4Lib 125 TKMK------EIAEAY-LGKTVT-NAVVTVP----AYF-----------N 151 ksqlknlvecaeriFglpVriivgsPlgigGLtdvvrnPelAtavgl<-* sq + +++ + gl+V i+ +P A+a++ Rabbit4Lib 152 DSQRQATKDAGTIA-GLNVLRIINEP--------------TAAAIAY 183 MreB_Mbl: domain 1 of 1, from 4 to 275: score -274.7, E = 2.3 *->skDiGIDLGTANTLV..YVkGkG.IVLnE......PSVVAintk... + +GIDLGT + V+ ++ Gk +I+ n ++++++PS VA +++ Rabbit4Lib 4 GPAVGIDLGTTYSCVgvFQHGKVeIIANDqgnrttPSYVAFTDTerl 50 .............tkkvlAVGeEAKkMlGkTPgnIvAiRPLkDG...VIA ++ +++ ++t++v +AK+ +G+ ++ v+ +k+ + V+ Rabbit4Lib 51 igdaaknqvamnpTNTVF----DAKRLIGRRFDDAVVQSDMKHWpfmVVN 96 Df..................evTEaMLKyFIkkvhgarrslskPrvvICv D ++++ + + ++++++ +e M +k + a + v+ v Rabbit4Lib 97 DAgrpkvqveykgetksfypEEVSSMVLTKMKEIAEAYLGKTVTNAVVTV 146 PsgiTeVERRAvkeaaknAGAreVfLIEEPmAAAIGAGLP..VeEPtGnM P + R+A k+a+ AG + +I EP AAAI GL+++V + + + Rabbit4Lib 147 PAYFNDSQRQATKDAGTIAGLNVLRIINEPTAAAIAYGLDkkVGAERNVL 196 VVDIGGGTTEvAVISLG.GIVtskSvRVAGDelDeaIikYiRkkYnLlIG + D GGGT +v+++ +GI + kS +AGD Rabbit4Lib 197 IFDLGGGTFDVSILTIEdGIFEVKS--TAGD------------------- 225 ErTAErIKieIGsAypdeeeeelkmeIrGRDlvtGLPktieisseEvreA + ++e+ + ++v Rabbit4Lib 226 -------------THLGGEDF---------------------DNRMVTXF 241 LkepvsaIveavkevLEkTPPELAaDIvdrGIvLTGGGALLrGLDkllse ++e +++ + DI ++ +e Rabbit4Lib 242 IAE-FQRSXKK--------------DISEN------------------RE 258 eTglPViiAedPLtCVAlGTGkaLenidklkr<-* g++ ++++ l++ Rabbit4Lib 259 LSGVSAQ---------------LVSELTYLSS 275 HSP70: domain 1 of 1, from 6 to 280: score 192.6, E = 6.3e-54 *->viGIDLGTTNScVAVmeggkpevIaNaeGnRtTPSvVAFtkkGERLV ++GIDLGTT+ScV+V+++gk+e+IaN++GnRtTPS+VAFt++ ERL+ Rabbit4Lib 6 AVGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDT-ERLI 51 GqaAKrQavtNpeNTvfsvKRlIGRrFddpeVqkdikhvPykvvkdsngd G+aAK+Q+++Np+NTvf++KRlIGRrFdd +Vq+d+kh+P+ vv+d g Rabbit4Lib 52 GDAAKNQVAMNPTNTVFDAKRLIGRRFDDAVVQSDMKHWPFMVVND-AGR 100 awveveylGkkktftPeeISAmvLqKmKetAEayLGekVtkAVITVPAYF ++v+vey+G++k f Pee+S+mvL+KmKe+AEayLG++Vt+AV+TVPAYF Rabbit4Lib 101 PKVQVEYKGETKSFYPEEVSSMVLTKMKEIAEAYLGKTVTNAVVTVPAYF 150 NDaQRQATKDAGrIAGLnVlRIiNEPTAAALAYGLDKkdlpeeekernil ND+QRQATKDAG+IAGLnVlRIiNEPTAAA+AYGLDKk + ern+l Rabbit4Lib 151 NDSQRQATKDAGTIAGLNVLRIINEPTAAAIAYGLDKKVGA----ERNVL 196 VfDLGGGTFDVSiLeigdGVFEVkaTnGDThLGGeDFDnrlvdhlveeFk +fDLGGGTFDVSiL+i+dG+FEVk+T+GDThLGGeDFDnr+v +++eF+ Rabbit4Lib 197 IFDLGGGTFDVSILTIEDGIFEVKSTAGDTHLGGEDFDNRMVTXFIAEFQ 246 kkegiDlskDkrAlqRLreAAEKAKieLSsssqTeinLpfitadadGPkh + ++D+s++ +eLS+ + a Rabbit4Lib 247 RSXKKDISEN---------------RELSG------------VSA----- 264 lsetLtRAkFEeLvadLfeRtlePvekaLkDAklsksdIdeVvLVGGSTR Rabbit4Lib - -------------------------------------------------- - IPkVqelVkefFGdGKePskgvNPDEAVAiGAAvQaGVLsGseeVkDvlL +lV+e++ Ls Rabbit4Lib 265 -----QLVSELTY-------------------------LSS--------- 275 LDVtPLSLGIETlGGvmtklIeRNTTIPTkksqiFSTaaDNQtaVeIqVl +P Rabbit4Lib 276 ---AP--------------------------------------------- 277 QGERelakDNklLGqFeLdGIpPAPrGvPqIEVtFdIDANGIlnVsAkDk Rabbit4Lib - -------------------------------------------------- - gtgkeqkItItnssgrLsddEIerMvkdAEkyaeeDkkrkeriEakNeaE ss Rabbit4Lib 278 ------------SSM----------------------------------- 280 syvystekslkeeklgdklseadkekiekkvedaiewLkealegeddaek Rabbit4Lib - -------------------------------------------------- - eeikakteeLqkvvqkigekmyq<-* Rabbit4Lib - ----------------------- - // Query: Rabbit4Lib.400.C1 406 1 487 nseq=2; minus strand; translated Scores for sequence family classification (score includes all domains): Model Description Score E-value N -------- ----------- ----- ------- --- [no hits above thresholds] Parsed for domains: Model Domain seq-f seq-t hmm-f hmm-t score E-value -------- ------- ----- ----- ----- ----- ----- ------- [no hits above thresholds] Alignments of top-scoring domains: [no hits above thresholds] // Query: Rabbit4Lib.400.C2 494 100 537 nseq=4; minus strand; translated Scores for sequence family classification (score includes all domains): Model Description Score E-value N -------- ----------- ----- ------- --- [no hits above thresholds] Parsed for domains: Model Domain seq-f seq-t hmm-f hmm-t score E-value -------- ------- ----- ----- ----- ----- ----- ------- [no hits above thresholds] Alignments of top-scoring domains: [no hits above thresholds] // Query: Rabbit4Lib.401.C1 240 1 175 nseq=2; minus strand; translated Scores for sequence family classification (score includes all domains): Model Description Score E-value N -------- ----------- ----- ------- --- [no hits above thresholds] Parsed for domains: Model Domain seq-f seq-t hmm-f hmm-t score E-value -------- ------- ----- ----- ----- ----- ----- ------- [no hits above thresholds] Alignments of top-scoring domains: [no hits above thresholds] // Query: Rabbit4Lib.405.C1 1430 1 906 nseq=3; minus strand; translated Scores for sequence family classification (score includes all domains): Model Description Score E-value N -------- ----------- ----- ------- --- Sec63 Sec63 domain 519.5 2.5e-152 1 Parsed for domains: Model Domain seq-f seq-t hmm-f hmm-t score E-value -------- ------- ----- ----- ----- ----- ----- ------- Sec63 1/1 8 290 .. 1 334 [] 519.5 2.5e-152 Alignments of top-scoring domains: Sec63: domain 1 of 1, from 8 to 290: score 519.5, E = 2.5e-152 *->dfsptdLGRIASyYYItYtTietFnqlLketttekdlleilSqAsEF + ++ei+S+A+E+ Rabbit4Lib 8 ----------------------------------ARAYEIISNAAEY 20 dqipvReeEdleLrkLlerslPislacnesledphvKvNvLLQAYiSRlk ++ip+R++Ed++Lr+L+++ +P++l+ n++++dphvK+N+LLQA++SR++ Rabbit4Lib 21 ENIPIRHHEDNLLRQLAQK-VPHKLN-NPKFNDPHVKTNLLLQAHLSRMQ 68 LegfaLvsDtvyVlqnAgRLirAlfdIllsrGWlslAlkaLeLskMitqr L++ +L+sDt+++l++A+RLi+A++d+l+s+GWls+Al a+eL++M+tq+ Rabbit4Lib 69 LSA-ELQSDTEEILSKAIRLIQACVDVLSSNGWLSPALAAMELAQMVTQA 117 lWdsdsPLrQfPhlpaelikrcekkkgvlsverLldLeddElgeLLhmnd +W++ds+L+Q+Ph+++e+ikrc++ kgv+sv++++++ed+E++ LL+++d Rabbit4Lib 118 MWSKDSYLKQLPHFTSEHIKRCTD-KGVESVFDIMEMEDEERNALLQLTD 166 kqgadvakfvnLIryPkieleaelqpitrtvlrveltitpdftWDeevhG +q+adva+f+n ryP+iel++e++++++++++ +++++++++++eev+G Rabbit4Lib 167 SQIADVARFCN--RYPNIELSYEVVDKDSIRSGGPVVVLVQLEREEEVTG 214 evpViAPlFPkkKeEgFWivveDsdsneLLhierflLnkkqvissdRLsh pViAPlFP+k+eEg+W+v++D++sn+L++i+r++L++k+ ++ Rabbit4Lib 215 --PVIAPLFPQKREEGWWVVIGDAKSNSLISIKRLTLQQKA-------KV 255 kLeFtiPlfePlppqYyirvVSDswLGaetelpvsfq<-* kL+F++P +++ ++Y+++++SD ++G+++e+++s++ Rabbit4Lib 256 KLDFVAP--ATGAHNYTLYFMSDAYMGCDQEYKFSVD 290 // Query: Rabbit4Lib.410.C1 287 1 266 nseq=2; minus strand; translated Scores for sequence family classification (score includes all domains): Model Description Score E-value N -------- ----------- ----- ------- --- [no hits above thresholds] Parsed for domains: Model Domain seq-f seq-t hmm-f hmm-t score E-value -------- ------- ----- ----- ----- ----- ----- ------- [no hits above thresholds] Alignments of top-scoring domains: [no hits above thresholds] // Query: Rabbit4Lib.414.C1 308 1 480 nseq=2; minus strand; translated Scores for sequence family classification (score includes all domains): Model Description Score E-value N -------- ----------- ----- ------- --- [no hits above thresholds] Parsed for domains: Model Domain seq-f seq-t hmm-f hmm-t score E-value -------- ------- ----- ----- ----- ----- ----- ------- [no hits above thresholds] Alignments of top-scoring domains: [no hits above thresholds] // Query: Rabbit4Lib.415.C2 221 119 297 nseq=2; translated Scores for sequence family classification (score includes all domains): Model Description Score E-value N -------- ----------- ----- ------- --- [no hits above thresholds] Parsed for domains: Model Domain seq-f seq-t hmm-f hmm-t score E-value -------- ------- ----- ----- ----- ----- ----- ------- [no hits above thresholds] Alignments of top-scoring domains: [no hits above thresholds] // Query: Rabbit4Lib.416.C1 418 1 372 nseq=2; minus strand; translated Scores for sequence family classification (score includes all domains): Model Description Score E-value N -------- ----------- ----- ------- --- [no hits above thresholds] Parsed for domains: Model Domain seq-f seq-t hmm-f hmm-t score E-value -------- ------- ----- ----- ----- ----- ----- ------- [no hits above thresholds] Alignments of top-scoring domains: [no hits above thresholds] // Query: Rabbit4Lib.417.C1 353 81 407 nseq=2; minus strand; translated Scores for sequence family classification (score includes all domains): Model Description Score E-value N -------- ----------- ----- ------- --- [no hits above thresholds] Parsed for domains: Model Domain seq-f seq-t hmm-f hmm-t score E-value -------- ------- ----- ----- ----- ----- ----- ------- [no hits above thresholds] Alignments of top-scoring domains: [no hits above thresholds] // Query: Rabbit4Lib.418.C1 179 1 204 nseq=2; minus strand; translated Scores for sequence family classification (score includes all domains): Model Description Score E-value N -------- ----------- ----- ------- --- [no hits above thresholds] Parsed for domains: Model Domain seq-f seq-t hmm-f hmm-t score E-value -------- ------- ----- ----- ----- ----- ----- ------- [no hits above thresholds] Alignments of top-scoring domains: [no hits above thresholds] // Query: Rabbit4Lib.419.C1 1281 1 1222 nseq=2; minus strand; translated Scores for sequence family classification (score includes all domains): Model Description Score E-value N -------- ----------- ----- ------- --- HMG_box HMG (high mobility group) box 73.1 6e-18 1 Pkinase_C Protein kinase C terminal domain 1.8 3.7 1 Parsed for domains: Model Domain seq-f seq-t hmm-f hmm-t score E-value -------- ------- ----- ----- ----- ----- ----- ------- HMG_box 1/1 38 106 .. 1 69 [] 73.1 6e-18 Pkinase_C 1/1 321 373 .. 1 47 [] 1.8 3.7 Alignments of top-scoring domains: HMG_box: domain 1 of 1, from 38 to 106: score 73.1, E = 6e-18 *->PKRPlsAFflfrqeqRakikaenPglsnaeIskklGekWkaLseeeK +RP++AF+lf++ +R +++e+P l n +k+l+ W L ++eK Rabbit4Lib 38 ARRPMNAFLLFCKRHRSLVRQEHPRLDNRGATKILADWWAVLDPKEK 84 apYeakAekeKarYekempeYk<-* ++Y ++A+++K ++k++p+Yk Rabbit4Lib 85 QKYTDMAKEYKDAFMKANPGYK 106 Pkinase_C: domain 1 of 1, from 321 to 373: score 1.8, E = 3.7 *->kvksptDTsNFDpeFTsepptltpp.......pdsr.lssgkqleFv +v++ +NF++ ++ ++ + +++++ ++ + k ++F Rabbit4Lib 321 NVRDSKELRNFEE--LQMGDVMAIKmedskeiRKEElDEDKKCSHFP 365 GFtYvnpe<-* F+Y++++ Rabbit4Lib 366 DFSYSASS 373 // Query: Rabbit4Lib.420.C2 974 1 1027 nseq=2; minus strand; translated Scores for sequence family classification (score includes all domains): Model Description Score E-value N -------- ----------- ----- ------- --- [no hits above thresholds] Parsed for domains: Model Domain seq-f seq-t hmm-f hmm-t score E-value -------- ------- ----- ----- ----- ----- ----- ------- [no hits above thresholds] Alignments of top-scoring domains: [no hits above thresholds] // Query: Rabbit4Lib.422.C1 744 31 400 nseq=2; minus strand; translated Scores for sequence family classification (score includes all domains): Model Description Score E-value N -------- ----------- ----- ------- --- Ribosomal_S19e Ribosomal protein S19e 287.1 2.3e-82 1 Parsed for domains: Model Domain seq-f seq-t hmm-f hmm-t score E-value -------- ------- ----- ----- ----- ----- ----- ------- Ribosomal_S19e 1/1 4 122 .] 1 141 [] 287.1 2.3e-82 Alignments of top-scoring domains: Ribosomal_S19e: domain 1 of 1, from 4 to 122: score 287.1, E = 2.3e-82 *->vTVKDVdahefvkAyAaFLKksGKlkVPEWvDiVKTgksKELaPydp vTVKDV+++efv+A+AaFLKksGKlkVPEWvD+VK++k+KELaPyd+ Rabbit4Lib 4 VTVKDVNQQEFVRALAAFLKKSGKLKVPEWVDTVKLAKHKELAPYDE 50 DWyYvRAASIaRhlYlRspvGVGslrKiYGGrKrRGvrPsHFckASGsis +W+Y+RAAS+aRhlYlR+++GVGs++KiYGGr+r+Gv+PsHF+++S+s++ Rabbit4Lib 51 NWFYTRAASTARHLYLRGGAGVGSMTKIYGGRQRNGVMPSHFSRGSKSVA 100 RKvLQaLEklgiVEkdPdGgGRrlTsqGrRDLDRIAkqvrdede<-* R+vLQaLE+l++VEkd+dG GR Rabbit4Lib 101 RRVLQALEGLKMVEKDQDG-GR---------------------N 122 // Query: Rabbit4Lib.422.C2 486 13 432 nseq=2; minus strand; translated Scores for sequence family classification (score includes all domains): Model Description Score E-value N -------- ----------- ----- ------- --- Ribosomal_S19e Ribosomal protein S19e 275.1 8.9e-79 1 Parsed for domains: Model Domain seq-f seq-t hmm-f hmm-t score E-value -------- ------- ----- ----- ----- ----- ----- ------- Ribosomal_S19e 1/1 1 139 [. 1 141 [] 275.1 8.9e-79 Alignments of top-scoring domains: Ribosomal_S19e: domain 1 of 1, from 1 to 139: score 275.1, E = 8.9e-79 *->vTVKDVdahefvkAyAaFLKksGKlkVPEWvDiVKTgksKELaPydp VKDV+++efv+A+AaFLKksGKlkVPEWvD+VK++k+KEL+P d+ Rabbit4Lib 1 -AVKDVNQQEFVRALAAFLKKSGKLKVPEWVDTVKLAKHKELPPTDE 46 DWyYvRAASIaRhlYlRsp......vGVGslrKiYGGrKrRGvrPsHFck +W+Y+RAA R++ + + VGs++KiYGGr+r+Gv+PsHF++ Rabbit4Lib 47 NWFYTRAAP------QRGTctcgvvLXVGSMTKIYGGRQRNGVMPSHFSR 90 ASGsisRKvLQaLEklgiVEkdPdGgGRrlTsqGrRDLDRIAkqvrdede +S+s++R+vLQaLE+l++VEkd+dG GR+lT+q + DLDRIA+qv+++++ Rabbit4Lib 91 GSKSVARRVLQALEGLKMVEKDQDG-GRKLTPQDKXDLDRIAGQVAAANK 139 <-* Rabbit4Lib - - // Query: Rabbit4Lib.424.C1 228 1 466 nseq=2; minus strand; translated Scores for sequence family classification (score includes all domains): Model Description Score E-value N -------- ----------- ----- ------- --- [no hits above thresholds] Parsed for domains: Model Domain seq-f seq-t hmm-f hmm-t score E-value -------- ------- ----- ----- ----- ----- ----- ------- [no hits above thresholds] Alignments of top-scoring domains: [no hits above thresholds] // Query: Rabbit4Lib.430.C1 362 51 329 nseq=2; minus strand; translated Scores for sequence family classification (score includes all domains): Model Description Score E-value N -------- ----------- ----- ------- --- LSM LSM domain 79.2 8.7e-20 1 Parsed for domains: Model Domain seq-f seq-t hmm-f hmm-t score E-value -------- ------- ----- ----- ----- ----- ----- ------- LSM 1/1 23 89 .. 1 71 [] 79.2 8.7e-20 Alignments of top-scoring domains: LSM: domain 1 of 1, from 23 to 89: score 79.2, E = 8.7e-20 *->kfLkklFLNlRlgkrVtVeLknGrelrGtLkgfDqfmNlvLddveEt + L++ + +V+++ + +++++G ++gfD++mNlvLdd+eE+ Rabbit4Lib 23 RYLQNR-----SRIQVWLYEQVNMRIEGCIIGFDEYMNLVLDDAEEI 64 i.dgkknrklglvliRGnnIvlisp<-* +++k +++lg+++++G+nI+l+ Rabbit4Lib 65 HsKTKSRKQLGRIMLKGDNITLLQS 89 // Query: Rabbit4Lib.430.C2 142 1 182 nseq=2; minus strand; translated Scores for sequence family classification (score includes all domains): Model Description Score E-value N -------- ----------- ----- ------- --- LSM LSM domain 41.5 1.9e-08 1 Parsed for domains: Model Domain seq-f seq-t hmm-f hmm-t score E-value -------- ------- ----- ----- ----- ----- ----- ------- LSM 1/1 4 57 .. 1 71 [] 41.5 1.9e-08 Alignments of top-scoring domains: LSM: domain 1 of 1, from 4 to 57: score 41.5, E = 1.9e-08 *->kfLkklFLNlRlgkrVtVeLknGrelrGtLkgfDqfmNlvLddveEt + ++ +++G ++gfD++mNlvLdd+eE+ Rabbit4Lib 4 PEQVNM------------------RIEGCIIGFDEYMNLVLDDAEEI 32 i.dgkknrklglvliRGnnIvlisp<-* +++k +++lg+++++G+nI+l+ Rabbit4Lib 33 HsKTKSRKQLGRIMLKGDNITLLQS 57 // Query: Rabbit4Lib.434.C1 497 293 1174 nseq=3; minus strand; translated Scores for sequence family classification (score includes all domains): Model Description Score E-value N -------- ----------- ----- ------- --- [no hits above thresholds] Parsed for domains: Model Domain seq-f seq-t hmm-f hmm-t score E-value -------- ------- ----- ----- ----- ----- ----- ------- [no hits above thresholds] Alignments of top-scoring domains: [no hits above thresholds] // Query: Rabbit4Lib.436.C2 835 62 1018 nseq=2; minus strand; translated Scores for sequence family classification (score includes all domains): Model Description Score E-value N -------- ----------- ----- ------- --- [no hits above thresholds] Parsed for domains: Model Domain seq-f seq-t hmm-f hmm-t score E-value -------- ------- ----- ----- ----- ----- ----- ------- [no hits above thresholds] Alignments of top-scoring domains: [no hits above thresholds] // Query: Rabbit4Lib.437.C2 1475 1 644 nseq=5; minus strand; translated Scores for sequence family classification (score includes all domains): Model Description Score E-value N -------- ----------- ----- ------- --- Ribosomal_S4 Ribosomal protein S4/S9 N-terminal domai 161.7 1.2e-44 1 S4 S4 domain 49.7 6.5e-11 1 Parsed for domains: Model Domain seq-f seq-t hmm-f hmm-t score E-value -------- ------- ----- ----- ----- ----- ----- ------- Ribosomal_S4 1/1 26 127 .. 1 110 [] 161.7 1.2e-44 S4 1/1 128 175 .. 1 48 [] 49.7 6.5e-11 Alignments of top-scoring domains: Ribosomal_S4: domain 1 of 1, from 26 to 127: score 161.7, E = 1.2e-44 *->sRyrgprlKliRRlgelpgLtakGhrDtkkagkygkrlrpgqhgwrv s+++++++ ++RR++e+++L+++ +k++g+yg lr+++++wrv Rabbit4Lib 26 SWVCRKTYVTPRRPFEKSRLDQE----LKLIGEYG--LRNKREVWRV 66 kktLskiDiRrlsryllrLeEKqklRffYGnlleRqLlrygrlaekkkKl k+tL+ki R+++r+ll+L+EK+++R+f+Gn+l+R+L+r+g+l+e+k+Kl Rabbit4Lib 67 KFTLAKI--RKAARELLTLDEKDPRRLFEGNALLRRLVRIGVLDEGKMKL 114 kgstgenllqlLE<-* ++++g++++++LE Rabbit4Lib 115 DYILGLKIEDFLE 127 S4: domain 1 of 1, from 128 to 175: score 49.7, E = 6.5e-11 *->mRLDkvLarlglasSRseArqlIrhGhVkVNGkvvkdpsyrvkpgDv +RL++ +++lgla+S+ +Ar lIr++h++V ++vv++ps++v+ + + Rabbit4Lib 128 RRLQTQVFKLGLAKSIHHARVLIRQRHIRVRKQVVNIPSFIVRLDSQ 174 i<-* Rabbit4Lib 175 K 175 // Query: Rabbit4Lib.437.C3 1474 1 651 nseq=2; minus strand; translated Scores for sequence family classification (score includes all domains): Model Description Score E-value N -------- ----------- ----- ------- --- Ribosomal_S4 Ribosomal protein S4/S9 N-terminal domai 161.7 1.2e-44 1 S4 S4 domain 49.7 6.5e-11 1 Parsed for domains: Model Domain seq-f seq-t hmm-f hmm-t score E-value -------- ------- ----- ----- ----- ----- ----- ------- Ribosomal_S4 1/1 29 130 .. 1 110 [] 161.7 1.2e-44 S4 1/1 131 178 .. 1 48 [] 49.7 6.5e-11 Alignments of top-scoring domains: Ribosomal_S4: domain 1 of 1, from 29 to 130: score 161.7, E = 1.2e-44 *->sRyrgprlKliRRlgelpgLtakGhrDtkkagkygkrlrpgqhgwrv s+++++++ ++RR++e+++L+++ +k++g+yg lr+++++wrv Rabbit4Lib 29 SWVCRKTYVTPRRPFEKSRLDQE----LKLIGEYG--LRNKREVWRV 69 kktLskiDiRrlsryllrLeEKqklRffYGnlleRqLlrygrlaekkkKl k+tL+ki R+++r+ll+L+EK+++R+f+Gn+l+R+L+r+g+l+e+k+Kl Rabbit4Lib 70 KFTLAKI--RKAARELLTLDEKDPRRLFEGNALLRRLVRIGVLDEGKMKL 117 kgstgenllqlLE<-* ++++g++++++LE Rabbit4Lib 118 DYILGLKIEDFLE 130 S4: domain 1 of 1, from 131 to 178: score 49.7, E = 6.5e-11 *->mRLDkvLarlglasSRseArqlIrhGhVkVNGkvvkdpsyrvkpgDv +RL++ +++lgla+S+ +Ar lIr++h++V ++vv++ps++v+ + + Rabbit4Lib 131 RRLQTQVFKLGLAKSIHHARVLIRQRHIRVRKQVVNIPSFIVRLDSQ 177 i<-* Rabbit4Lib 178 K 178 // Query: Rabbit4Lib.438.C1 393 54 610 nseq=4; minus strand; translated Scores for sequence family classification (score includes all domains): Model Description Score E-value N -------- ----------- ----- ------- --- UQ_con Ubiquitin-conjugating enzyme 56.3 6.8e-13 1 Parsed for domains: Model Domain seq-f seq-t hmm-f hmm-t score E-value -------- ------- ----- ----- ----- ----- ----- ------- UQ_con 1/1 7 142 .. 1 165 [] 56.3 6.8e-13 Alignments of top-scoring domains: UQ_con: domain 1 of 1, from 7 to 142: score 56.3, E = 6.8e-13 *->RLqkElkelektelqkdpppgisagpvddpdgpnnlfeWevtIrGPe RLqkEl lq dpppg + ++ n+++ W v ++G + Rabbit4Lib 7 RLQKELL-----ALQNDPPPGMTLNEKSVQ---NSITQWIVDMEGAP 45 gTpYeGGvFkldieFPedYPfkPPkvkFt..TkiyHPNVdsesGeiCLdI gT+YeG +F l ++F+ YPf+ P+v Ft+++ HP+V+ ++G+iCL+I Rabbit4Lib 46 GTLYEGEKFQLLFKFSSRYPFDSPQVMFTgeNIPVHPHVY-SNGHICLSI 94 LkPGDDpgYEaderddevWsPaltvrsvLlsiqsLLLsePyNpedPlnae L e++ P + +s +++++LL++ P + +++ Rabbit4Lib 95 LT----------EDG-----PQRSQSS--QFVLALLVCFP-AAKKRDDHQ 126 aAklykenreefkkrvreyv<-* + ++ e+ r+ ++ Rabbit4Lib 127 IILFMC----EHVTRIQRKQ 142 // Query: Rabbit4Lib.443.C1 832 1 803 nseq=3; minus strand; translated Scores for sequence family classification (score includes all domains): Model Description Score E-value N -------- ----------- ----- ------- --- [no hits above thresholds] Parsed for domains: Model Domain seq-f seq-t hmm-f hmm-t score E-value -------- ------- ----- ----- ----- ----- ----- ------- [no hits above thresholds] Alignments of top-scoring domains: [no hits above thresholds] // Query: Rabbit4Lib.444.C1 223 1 486 nseq=2; minus strand; translated Scores for sequence family classification (score includes all domains): Model Description Score E-value N -------- ----------- ----- ------- --- Histone Core histone H2A/H2B/H3/H4 93.8 3.3e-24 1 CBFD_NFYB_HMF Histone-like transcription factor (CBF/ 2.3 0.62 1 Parsed for domains: Model Domain seq-f seq-t hmm-f hmm-t score E-value -------- ------- ----- ----- ----- ----- ----- ------- CBFD_NFYB_HMF 1/1 59 124 .. 1 66 [] 2.3 0.62 Histone 1/1 53 129 .. 1 77 [] 93.8 3.3e-24 Alignments of top-scoring domains: CBFD_NFYB_HMF: domain 1 of 1, from 59 to 124: score 2.3, E = 0.62 *->aeLPiArvkrIMKsdLpdagkiskdAkeliaecveeFiefiaseAae +P +r+ r +Ks ++g++ + A + a +e ++ + A Rabbit4Lib 59 LQFPVGRIHRHLKSRTTSHGRVGATAAVYSAAILEYLTAEVLELAGN 105 ickkekRKTikaehiklAv<-* k+ k K i++ h++lA+ Rabbit4Lib 106 ASKDLKVKRITPRHLQLAI 124 Histone: domain 1 of 1, from 53 to 129: score 93.8, E = 3.3e-24 *->stdllilklpfsRvvRelkegfyaelRisskAlvalqealEdlleei ++ +++l++p++R++R lk ++ + R++++A v+ ++ lE+l++e+ Rabbit4Lib 53 RSQRAGLQFPVGRIHRHLKSRTTSHGRVGATAAVYSAAILEYLTAEV 99 ledAgllarhaKRvTitprDiqlAvRldge<-* le+Ag+++++ K ++itpr++qlA+R d+e Rabbit4Lib 100 LELAGNASKDLKVKRITPRHLQLAIRGDEE 129 // Query: Rabbit4Lib.446.C1 247 608 745 nseq=2; translated Scores for sequence family classification (score includes all domains): Model Description Score E-value N -------- ----------- ----- ------- --- [no hits above thresholds] Parsed for domains: Model Domain seq-f seq-t hmm-f hmm-t score E-value -------- ------- ----- ----- ----- ----- ----- ------- [no hits above thresholds] Alignments of top-scoring domains: [no hits above thresholds] // Query: Rabbit4Lib.447.C1 555 1 739 nseq=2; minus strand; translated Scores for sequence family classification (score includes all domains): Model Description Score E-value N -------- ----------- ----- ------- --- RTC_insert RNA 3'-terminal phosphate cyclase (RTC), i 108.5 1.3e-28 1 RTC RNA 3'-terminal phosphate cyclase -15.6 4.3e-08 1 Parsed for domains: Model Domain seq-f seq-t hmm-f hmm-t score E-value -------- ------- ----- ----- ----- ----- ----- ------- RTC_insert 1/1 53 168 .. 1 114 [] 108.5 1.3e-28 RTC 1/1 2 220 .. 1 233 [] -15.6 4.3e-08 Alignments of top-scoring domains: RTC_insert: domain 1 of 1, from 53 to 168: score 108.5, E = 1.3e-28 *->terGkikkirGisyaeatrlpphvAeRmaeaAkkilnklipgvdveI t+rG ++ki+G++++ a+ lp++vA++ma+aA+++++k+i+ d ++ Rabbit4Lib 53 TDRGSVTKIYGRAFV-AGVLPFKVAKDMAAAAVRCIRKEIR--DLYV 96 ytdvrkGvlaegfSpGsGIvLwAettkiGcrlGAdals.tGees...... ++ +++++++f++G+GI+++A + + + + G+ + + +++ Rabbit4Lib 97 NIQPVQEPKDQAFGNGNGIIIIAXDIH--WLF--VCWIiLGKREwtvrer 142 ..gkGvpAEvVGeeAAkeLLeelesG<-* ++ kGv A++VG++AA++LL++l++G Rabbit4Lib 143 hrEKGVTADKVGIDAAEMLLANLRHG 168 RTC: domain 1 of 1, from 2 to 220: score -15.6, E = 4.3e-08 RF xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx *->iDGSygEGGGQiLRtaLaLSaLtGkPvRIvnIRanRpnPGLrpQHLt H + Rabbit4Lib 2 --------------------------------------------HAS 4 RF xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx avralakItnAeveGaevGSteLeFrPgkikGGdyrvDigTAGSItLvLQ av Rabbit4Lib 5 AV------------------------------------------------ 6 RF xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx tlLplllFakgpsritlkGGTdvpwaPpvDyirnVtLplLekfGiegeeL +V+ p+ ekfG++++ Rabbit4Lib 7 ---------------------------------MVFKPIVEKFGFTFN-- 21 RF xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx ElkvlrRGfYPrGGGeVlltVepPvkplkpik.................. + ++ RG+YP+GGGeV++++ Pvk l+pi +++++ ++ +++ ++ Rabbit4Lib 22 -CDIKMRGYYPKGGGEVIVRMS-PVKQLNPINltdrgsvtkiygrafvag 69 RF .................................................. + + +++ ++++ + +++ ++ + + ++++ + +++++ + Rabbit4Lib 70 vlpfkvakdmaaaavrcirkeirdlyvniqpvqepkdqafgngngiiiia 119 RF x .................................................a + + ++++ + ++++++++ ++++ + ++++ ++ ++++ Rabbit4Lib 120 xdihwlfvcwiilgkrewtvrerhrekgvtadkvgidaaemllanlrhgG 169 RF xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx aVDehlaDqlilymALaggdvSeirvgeltldHlqTnirvieqFlgvkFe aVDe+l+Dqli++mALa g vS+i++g++tl H+qT+i+++eq+ +kF+ Rabbit4Lib 170 AVDEYLQDQLIVFMALANG-VSRIKTGPVTL-HTQTAIHFAEQLAKAKFT 217 RF xxx ieg<-* +++ Rabbit4Lib 218 VKK 220 // Query: Rabbit4Lib.448.C2 442 1 528 nseq=4; minus strand; translated Scores for sequence family classification (score includes all domains): Model Description Score E-value N -------- ----------- ----- ------- --- [no hits above thresholds] Parsed for domains: Model Domain seq-f seq-t hmm-f hmm-t score E-value -------- ------- ----- ----- ----- ----- ----- ------- [no hits above thresholds] Alignments of top-scoring domains: [no hits above thresholds] // Query: Rabbit4Lib.448.C3 971 80 793 nseq=6; minus strand; translated Scores for sequence family classification (score includes all domains): Model Description Score E-value N -------- ----------- ----- ------- --- UPF0005 Uncharacterised protein family UPF0005 190.5 2.7e-53 1 7TMR-DISM_7TM 7TM diverse intracellular signalling -61.4 7.3 1 Parsed for domains: Model Domain seq-f seq-t hmm-f hmm-t score E-value -------- ------- ----- ----- ----- ----- ----- ------- 7TMR-DISM_7TM 1/1 1 195 [. 1 212 [] -61.4 7.3 UPF0005 1/1 17 229 .. 1 460 [] 190.5 2.7e-53 Alignments of top-scoring domains: 7TMR-DISM_7TM: domain 1 of 1, from 1 to 195: score -61.4, E = 7.3 *->ralifglllGillllgfYnLflylsrrkdksyLyyalyillfllyql ++ ++ + + ll + + + + +k+y ++al+ + + ++ Rabbit4Lib 1 MNVFDRKINFDALLKFSHITPSTQQHL-KKVYASFALCMFVAAAGAY 46 slsglafeylDwpnipffaqkklaylllvllalffllFlrsflylksssr + +++ ++ ll+ l+ ++l++ + +++s+ Rabbit4Lib 47 VH---VVTHF------------IQAGLLSALGSLGLMMW--LMATPHSHE 79 rldrllgilalllf...........laillalfltdylvanriaqvlvll ++ lg+la ++f ++ + ++ +l+i++++ ++++ ++++a ++ Rabbit4Lib 80 TEQKRLGLLAGFAFltgvglgpaleLCIAINPS-ILPTAFLGTA----MI 124 filillllgikawrkgyrdArlfliaflvflvgglvSdllgllglipnni f++ l++++ + r + + + ++ a++++l++ l+ + g+++l++ n Rabbit4Lib 125 FTCFTLSALYARRRTYLFLGGILMSAMSLMLLSSLGNLFFGSIWLFQANL 174 tltsyalllglvlevlllslaLadER<-* y l +++ +vl+ + + + + Rabbit4Lib 175 ----YMGLVVMCGFVLFDTQLIIE-K 195 UPF0005: domain 1 of 1, from 17 to 229: score 190.5, E = 2.7e-53 *->wkl..gkqdprRvvyalkvglaLlLvsllayirpvldsvgenaiwai +++++++q+++++vya + +l++++++++ay++ v++++++++++a+ Rabbit4Lib 17 SHItpSTQQHLKKVYASF-ALCMFVAAAGAYVHVVTHFIQAGLLSAL 62 ..ltvvvvlefsLvclivLSccvgatlnkglnrvlltlfAgllgvgvgpi ++l+++ +l+++ ++++++++++++ll+ fA+l+gvg+gp Rabbit4Lib 63 gsLGLMMWLMAT----------PHSHETEQKRLGLLAGFAFLTGVGLGPA 102 asmygaifepiilvisaFgitaavfffrslpslktryDygfqlgfiLtfa +++++a ++p+il+++++g+++++++f++ + +++r+ y+f lg+iL+ a Rabbit4Lib 103 LELCIA-INPSILPTAFLGTAMIFTCFTLSALYARRRTYLF-LGGILMSA 150 livlsgfrigaltnlffWtAssrlsliisgagillfvgyilydtqaiedl +++ ++ ++g nlff + s +l++++++ g+++++g++l+dtq+i+++ Rabbit4Lib 151 MSLMLLSSLG---NLFF-G-SIWLFQANLYMGLVVMCGFVLFDTQLIIEK 195 hkliannfeklAdSLEgCVneYLeeeeyerepskiltyeasedpvysgYr + + Rabbit4Lib 196 A--EN--------------------------------------------- 198 SvLnSkspeeyiAnfAkWEPpHGrfkfrhPWknYVKvGgalRhCAytVmA ++++yi Rabbit4Lib 199 ------GDKDYI-------------------------------------- 204 LHGCilsEiQAPeelRqkFkeelqrvsEgaKvLreLaeslkkMrklspsi Rabbit4Lib - -------------------------------------------------- - llddvhsAaeeLqskIdsksyLlvnSesweiikrttetsgeameresnes Rabbit4Lib - -------------------------------------------------- - mmllkreswpsrsaateeeseerqvdleermkslEsaeaLSlaaaasLyl +++++L+l Rabbit4Lib 205 ------------------------------------------WHCVDLFL 212 dfvnlFlslLeilgels<-* df++lF++l++il++++ Rabbit4Lib 213 DFITLFRKLMMILAMNE 229 // Query: Rabbit4Lib.451.C2 260 1 299 nseq=2; minus strand; translated Scores for sequence family classification (score includes all domains): Model Description Score E-value N -------- ----------- ----- ------- --- UBA UBA/TS-N domain 30.0 5.4e-05 1 Parsed for domains: Model Domain seq-f seq-t hmm-f hmm-t score E-value -------- ------- ----- ----- ----- ----- ----- ------- UBA 1/1 56 96 .. 1 45 [] 30.0 5.4e-05 Alignments of top-scoring domains: UBA: domain 1 of 1, from 56 to 96: score 30.0, E = 5.4e-05 *->ideelvkqLreMGGGvfsreeakkALratnnnsDverAvewLleh<- + +++++qL +MG f ea+ + + ++ D+++A+e Ll Rabbit4Lib 56 RFQQQLEQLSAMG---FLNREANLQALIATGG-DINAAIERLLGS 96 * Rabbit4Lib - - // Query: Rabbit4Lib.452.C1 456 24 584 nseq=2; minus strand; translated Scores for sequence family classification (score includes all domains): Model Description Score E-value N -------- ----------- ----- ------- --- S1 S1 RNA binding domain 4.0 0.59 1 Parsed for domains: Model Domain seq-f seq-t hmm-f hmm-t score E-value -------- ------- ----- ----- ----- ----- ----- ------- S1 1/1 92 156 .. 1 79 [] 4.0 0.59 Alignments of top-scoring domains: S1: domain 1 of 1, from 92 to 156: score 4.0, E = 0.59 *->kleeGdvveGtVtrvtklfGafVdlgengveGfvpiSeisrdkeyrv ++++ v G+++ ++ + +++d g ++ + + + e++ Rabbit4Lib 92 GPAKDKLVIGRIFHIVE-DDLYIDFG-GKFHCVCRRPEVD------- 129 edpsevlkvGdevkvkvlkvDkergriiLSik<-* e++++G +v++ +l+++++ + L+ Rabbit4Lib 130 ---GEKYQKGTRVRLRLLDLELTSR--FLGAT 156 // Query: Rabbit4Lib.455.C1 483 221 536 nseq=2; minus strand; translated Scores for sequence family classification (score includes all domains): Model Description Score E-value N -------- ----------- ----- ------- --- [no hits above thresholds] Parsed for domains: Model Domain seq-f seq-t hmm-f hmm-t score E-value -------- ------- ----- ----- ----- ----- ----- ------- [no hits above thresholds] Alignments of top-scoring domains: [no hits above thresholds] // Query: Rabbit4Lib.456.C1 655 1 440 nseq=2; minus strand; translated Scores for sequence family classification (score includes all domains): Model Description Score E-value N -------- ----------- ----- ------- --- S_100 S-100/ICaBP type calcium binding domain 71.6 1.6e-17 1 Parsed for domains: Model Domain seq-f seq-t hmm-f hmm-t score E-value -------- ------- ----- ----- ----- ----- ----- ------- S_100 1/1 35 78 .. 1 44 [] 71.6 1.6e-17 Alignments of top-scoring domains: S_100: domain 1 of 1, from 35 to 78: score 71.6, E = 1.6e-17 *->LEkaietiInvFhqYSgreGdkdtLsKkELKeLlekELpnfLkn<-* LE aiet++n+F++++g+eG k +Ls +E+KeL++++Lp+ Lk Rabbit4Lib 35 LEAAIETVVNTFFTFAGKEGRKGSLSVNEFKELVTQQLPHLLKD 78 // Query: Rabbit4Lib.460.C1 765 1 1132 nseq=3; minus strand; translated Scores for sequence family classification (score includes all domains): Model Description Score E-value N -------- ----------- ----- ------- --- HDV_ag Hepatitis delta virus delta antigen -49.7 8.9 1 SMC_N RecF/RecN/SMC N terminal domain -126.0 0.14 1 Parsed for domains: Model Domain seq-f seq-t hmm-f hmm-t score E-value -------- ------- ----- ----- ----- ----- ----- ------- HDV_ag 1/1 156 344 .. 1 194 [] -49.7 8.9 SMC_N 1/1 39 370 .. 1 243 [] -126.0 0.14 Alignments of top-scoring domains: HDV_ag: domain 1 of 1, from 156 to 344: score -49.7, E = 8.9 *->msqseaRrdrrgREeiLekWveaRkkkeeLEkDLRkvkKkiKkLEee m + e + + +i + +e +k + L+k++ ++++ki+ e Rabbit4Lib 156 MKEKELEEKTSQARQICPERIEVKKSASILDKEINRLRQKIQ---AE 199 nPWLGnvvGiirk..dKDgeGAPPAKrpRtdqmEvDsGPrkrpkkgGFtd G i+r+ ++ + + Rt + + ++ + Rabbit4Lib 200 HASHGDREEIMRQyqEARETYLDLDNKVRTLRRFIKLLEEIMTHRYKTYQ 249 kERrDHRRRKAL..EnKkKqLssGGKsLsrEEEEELrRLteeDeeReRRv + Rr R L +n q + GK E L + e + Rabbit4Lib 250 QFRRCLTLRCXLyfDNLLSQRAYCGKMNFDHKNETLTISVQPGEGNK--- 296 AGPrvGdvnPldGgpRGAPGGGFvPslqgvPEsPFsRtGeGlDiRGtqeF d+ l Gg R F+ sl + EsPF R + D+ Rabbit4Lib 297 --AAFNDMRALSGGERSFSTVCFILSLWSIAESPF-RCLDEFDVYMDMVN 343 P<-* Rabbit4Lib 344 R 344 SMC_N: domain 1 of 1, from 39 to 370: score -126.0, E = 0.14 RF xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx *->ylkrielegFKSYagktiigpFspgFtaIvGPNGSGKSNiiDAIlFV y + ++e+ +++++++ + Rabbit4Lib 39 YFXKFRIEN---IE-EHQSVDIAT-------------------L--- 59 RF xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx LGersakkLRaeklsdLIhaGsksgasvnsAeVtitFlvqkivdnedkkh e+ a +++s ++ +V+ e+ k Rabbit4Lib 60 --EDEA----------------QENKSKMK-MVEKNM--------EQQK- 81 RF xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx iNSpflpideeeevsItRrvyrdGdqYSeYyINGknvtkIkdvseLLesa ++ e + + +++ ++ + I k ++ +++++ L+++ Rabbit4Lib 82 --------ENME-YLKSLKIVAENK---YEAIKLKINQL-SELADPLKDE 118 RF xxxxx GIske............................................. + + + +++++ ++ ++++++ ++ +++++++++ ++++++++ + Rabbit4Lib 119 LNLADsevdnqkrgkrhyedkqkehldtlnkkkreldmkekeleektsqa 168 RF .................................................. ++ ++ + ++ ++++ ++++++ + + ++++ ++ ++ ++ Rabbit4Lib 169 rqicperievkksasildkeinrlrqkiqaehashgdreeimrqyqeare 218 RF .................................................. ++++++ + +++ +++++ + + ++ ++ + ++ + ++++ Rabbit4Lib 219 tyldldnkvrtlrrfiklleeimthryktyqqfrrcltlrcxlyfdnlls 268 RF xxxxxxxxxxxxxxx ...................................nLSGGEKtLaALALl ++ + + + +++ + + + ++ ++ ++LSGGE++ + ++++ Rabbit4Lib 269 qraycgkmnfdhknetltisvqpgegnkaafndmrALSGGERSFSTVCFI 318 RF xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx FAQGEyliqkykPaPFYvlDEiDAALDeaNvsrvAnyiktelsknaQFIV ++ + + +PF lDE+D D +N+++ ++i + Rabbit4Lib 319 LS-----LWSIAESPFRCLDEFDVYMDMVNRRIAMDMIL-KMA------- 355 RF xxxxxxxxxxxxxxxxxxxxxxxxxx IslReemfekAdrlvGvymvengvst<-* ++r+ +y +s+ Rabbit4Lib 356 ---------DSQRFXTIYL--AYTSK 370 // Query: Rabbit4Lib.463.C2 383 1 323 nseq=3; minus strand; translated Scores for sequence family classification (score includes all domains): Model Description Score E-value N -------- ----------- ----- ------- --- PCI PCI domain 23.9 0.0028 1 Parsed for domains: Model Domain seq-f seq-t hmm-f hmm-t score E-value -------- ------- ----- ----- ----- ----- ----- ------- PCI 1/1 3 64 .. 1 135 [] 23.9 0.0028 Alignments of top-scoring domains: PCI: domain 1 of 1, from 3 to 64: score 23.9, E = 0.0028 *->payleLleafysgdlaefeelladhVvAkamkGwqkeeellqdpgla + Rabbit4Lib 3 ----------------------------------------------R 3 ekvwlegdkhleeLrrkirelnllqlakftypapyssislsdlaellgls + ++e+nll+ +k y++i++++l ll+++ Rabbit4Lib 4 P----------------VIEHNLLSASK-----LYNNITFEELGALLEIP 32 vvedvlqdevEkilsklIadgrirgkIDqvngivvvse<-* + +++Eki s++I +gr++g IDq +giv+++ Rabbit4Lib 33 A------AKAEKIASQMITEGRMNGFIDQIDGIVHFET 64 // Query: Rabbit4Lib.464.C1 168 949 1182 nseq=2; translated Scores for sequence family classification (score includes all domains): Model Description Score E-value N -------- ----------- ----- ------- --- [no hits above thresholds] Parsed for domains: Model Domain seq-f seq-t hmm-f hmm-t score E-value -------- ------- ----- ----- ----- ----- ----- ------- [no hits above thresholds] Alignments of top-scoring domains: [no hits above thresholds] // Query: Rabbit4Lib.465.C1 1052 73 1026 nseq=2; minus strand; translated Scores for sequence family classification (score includes all domains): Model Description Score E-value N -------- ----------- ----- ------- --- BRICHOS BRICHOS domain 128.2 1.5e-34 1 Parsed for domains: Model Domain seq-f seq-t hmm-f hmm-t score E-value -------- ------- ----- ----- ----- ----- ----- ------- BRICHOS 1/1 93 186 .. 1 109 [] 128.2 1.5e-34 Alignments of top-scoring domains: BRICHOS: domain 1 of 1, from 93 to 186: score 128.2, E = 1.5e-34 *->fsgsdeaiivhDFkngltAikdasgekCyikkldktaipslealvel ++g+de+++vhDFkng+t+i++++++kC+ik+++k +ip++++++e+ Rabbit4Lib 93 GNGTDETLEVHDFKNGYTGIYFVGLQKCFIKTQIK-VIPEFSEPEEE 138 lkniklggyipateyvPqsyliqeeksleyvvveerikkaDlsfLkGskI ++++++++++++++ s+++v++e++i+++D fLk+skI Rabbit4Lib 139 IDENEEITTTFFEQ------------SVIWVPAEKPIENRD--FLKNSKI 174 lrlCrdvptYwl<-* l++C++v++Yw+ Rabbit4Lib 175 LEICDNVTMYWI 186 // Query: Rabbit4Lib.467.C1 417 1 480 nseq=7; minus strand; translated Scores for sequence family classification (score includes all domains): Model Description Score E-value N -------- ----------- ----- ------- --- LANC_like Lanthionine synthetase C-like protein 107.6 2.4e-28 1 Parsed for domains: Model Domain seq-f seq-t hmm-f hmm-t score E-value -------- ------- ----- ----- ----- ----- ----- ------- LANC_like 1/1 1 159 [] 1 412 [] 107.6 2.4e-28 Alignments of top-scoring domains: LANC_like: domain 1 of 1, from 1 to 159: score 107.6, E = 2.4e-28 *->iKdlvvqmtWkilehceglssadvrDgtlYTGllGiAflylklYeVt Rabbit4Lib - ----------------------------------------------- - gdrddYPALllcleiiRnAkVkaCadlaslssrrVTFLCGrAGvcAlGAV + Rabbit4Lib 1 -----------------------T-------------------------- 1 iakklgdeeeldeyLarFlelnsgIvrleseLPvgpEeggfgmsCdELLY + Rabbit4Lib 2 -------------------H------------------------------ 2 GRaGYLwAcLFlNkylGeetipdddlrsvveaIltsGRslskderkkeaC ++ Rabbit4Lib 3 ----------------------------------------AS-------- 4 PLMYeWHgkrYwGAAHGLAGIlyvLlhpPWFRtLPisLkvdeekLiedVK e Rabbit4Lib 5 -----------------------------------------E-------- 5 gtldYmisnrFpnSGNYPvSegdkrsGRdDrLVHWCHGAPGvaytLaKAy +++dY+++++Fp SGNYP++ gd r D+LVHWCHGAPGv+y+L++Ay Rabbit4Lib 6 PSVDYVCQLKFP-SGNYPPCVGDNR----DLLVHWCHGAPGVIYMLIQAY 50 qVFkeeeefleaAiecaeVVWkrGLLkKGvGiCHGvsGNaYvFLsLYRLT +VFke e +l++A +ca+V+W++GLLkKG+G+CHG++GNaY+FL LY+LT Rabbit4Lib 51 KVFKE-EQYLCDAYQCADVIWQYGLLKKGYGLCHGAAGNAYAFLTLYNLT 99 gdskYLYRAkaFAsfLldygekLlsegecrtpDrPySLFEGvAGtvyfLl +d+k LYRA++FA+++ldyg ++g crtpD+P+SLFEG+AGt+yfL+ Rabbit4Lib 100 QDMKCLYRACKFAEWCLDYG----EHG-CRTPDTPFSLFEGMAGTIYFLA 144 DLldPeqArFPgyEL<-* DLl+P++ArFP++EL Rabbit4Lib 145 DLLVPTKARFPAFEL 159 // Query: Rabbit4Lib.469.C1 647 47 471 nseq=2; minus strand; translated Scores for sequence family classification (score includes all domains): Model Description Score E-value N -------- ----------- ----- ------- --- RNA_pol_L RNA polymerase Rpb3/Rpb11 dimerisation doma 80.5 3.5e-20 1 Parsed for domains: Model Domain seq-f seq-t hmm-f hmm-t score E-value -------- ------- ----- ----- ----- ----- ----- ------- RNA_pol_L 1/1 35 109 .. 1 92 [] 80.5 3.5e-20 Alignments of top-scoring domains: RNA_pol_L: domain 1 of 1, from 35 to 109: score 80.5, E = 3.5e-20 RF xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx *->dnkrnlygkFvlfelekgedhTlgNlLRRiLlaevpglAIdnPVkfa ++ +lf+++ +edhTlgN + Ll+++ V+fa Rabbit4Lib 35 NA--------CLFTIN-KEDHTLGNIINXQLLKDPQ-------VLFA 65 RF xxxxxx xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx gYtidp....ervknklifrIeTdGsitPkeaLlrAieiLkekleelke< gY++ p++ ++ k+i+r++T+ +++P+ea+ +Ai +L+ +l++l+e Rabbit4Lib 66 GYKV-PhpleH----KIIIRVQTTPDYSPQEAFTNAITDLISELSLLEE 109 RF -* Rabbit4Lib - - // Query: Rabbit4Lib.471.C1 423 198 537 nseq=2; minus strand; translated Scores for sequence family classification (score includes all domains): Model Description Score E-value N -------- ----------- ----- ------- --- BRCA2 BRCA2 repeat 2.0 8.4 1 Parsed for domains: Model Domain seq-f seq-t hmm-f hmm-t score E-value -------- ------- ----- ----- ----- ----- ----- ------- BRCA2 1/1 1 35 [. 1 35 [] 2.0 8.4 Alignments of top-scoring domains: BRCA2: domain 1 of 1, from 1 to 35: score 2.0, E = 8.4 *->fevsflgFqTASGKkvsVSeeSLkKakklLseiee<-* ++ f+g T +v+ e ++k+ ++lL++ie Rabbit4Lib 1 MARKFGGQNTEKAPQVQAAETAFKRNRSLLKDIET 35 // Query: Rabbit4Lib.474.C2 642 73 541 nseq=7; minus strand; translated Scores for sequence family classification (score includes all domains): Model Description Score E-value N -------- ----------- ----- ------- --- Cofilin_ADF Cofilin/tropomyosin-type actin-binding pr 139.5 6.2e-38 1 Parsed for domains: Model Domain seq-f seq-t hmm-f hmm-t score E-value -------- ------- ----- ----- ----- ----- ----- ------- Cofilin_ADF 1/1 19 153 .. 1 148 [] 139.5 6.2e-38 Alignments of top-scoring domains: Cofilin_ADF: domain 1 of 1, from 19 to 153: score 139.5, E = 6.2e-38 *->dnckekf.nelkkrkkkehryiifkIdknkedkteivveevGkk... +++k ++++e+kkrkk ++if+++ + k+ i+vee k+ Rabbit4Lib 19 KVRKCSTpEEIKKRKK----AVIFCLSAD---KKCIIVEEG-KEilv 57 ....astgasydeFveelpqlderecrYavydveyttdrqaneeskksKi ++ + + +++ Fv +lp e++crYa+yd +++t+ es+k+ + Rabbit4Lib 58 gdvgVTITDPFKHFVGMLP---EKDCRYALYDASFETK-----ESRKEEL 99 vFvsWcsPDtApvksKMlYASsKdalkkalgGdqiqvevqatIgDasdls F+ W+ P+ Ap ksKM+YASsKda+kk+++G i++e qa+ ++dl+ Rabbit4Lib 100 MFFLWA-PELAPLKSKMIYASSKDAIKKKFQG--IKHECQAN--GPEDLN 144 eeelkeklk<-* + ++ ekl Rabbit4Lib 145 RACIAEKLV 153 // Query: Rabbit4Lib.474.C3 612 150 617 nseq=2; minus strand; translated Scores for sequence family classification (score includes all domains): Model Description Score E-value N -------- ----------- ----- ------- --- Cofilin_ADF Cofilin/tropomyosin-type actin-binding pr 127.8 1.9e-34 1 DUF1353 Protein of unknown function (DUF1353) -41.5 7.3 1 Parsed for domains: Model Domain seq-f seq-t hmm-f hmm-t score E-value -------- ------- ----- ----- ----- ----- ----- ------- DUF1353 1/1 37 120 .. 1 97 [] -41.5 7.3 Cofilin_ADF 1/1 19 153 .. 1 148 [] 127.8 1.9e-34 Alignments of top-scoring domains: DUF1353: domain 1 of 1, from 37 to 120: score -41.5, E = 7.3 *->kfeLsedFsYvdpekgevivVPkGfvTDgASIPkifwsfiGgPfeGk f Ls+d + +++e g+ i V vT I +f f+G +e + Rabbit4Lib 37 IFCLSADKKCIIVEEGKEILVGDVGVT----ITDPFKHFVGMLPEKD 79 yakAAViHDWlYsigertdIsRkeADrIFLdaMreeGVnkvKAkimYlAV ++ A lY+ + +t+ sRke ++FL a + + K k Y+ Rabbit4Lib 80 CRYA------LYDASFETKESRKEEXDVFLWA---PELAPLKSKMIYASS 120 <-* Rabbit4Lib - - Cofilin_ADF: domain 1 of 1, from 19 to 153: score 127.8, E = 1.9e-34 *->dnckekf.nelkkrkkkehryiifkIdknkedkteivveevGkk... +++k ++++e+kkrkk ++if+++ + k+ i+vee k+ Rabbit4Lib 19 KVRKCSTpEEIKKRKK----AVIFCLSAD---KKCIIVEEG-KEilv 57 ....astgasydeFveelpqlderecrYavydveyttdrqaneeskksKi ++ + + +++ Fv +lp e++crYa+yd +++t+ es+k+ Rabbit4Lib 58 gdvgVTITDPFKHFVGMLP---EKDCRYALYDASFETK-----ESRKEEX 99 vFvsWcsPDtApvksKMlYASsKdalkkalgGdqiqvevqatIgDasdls + W+ P+ Ap ksKM+YASsKda+kk+++G i++e qa+ ++dl+ Rabbit4Lib 100 DVFLWA-PELAPLKSKMIYASSKDAIKKKFQG--IKHECQAN--GPEDLN 144 eeelkeklk<-* + ++ ekl Rabbit4Lib 145 RACIAEKLV 153 // Query: Rabbit4Lib.476.C1 177 1 230 nseq=2; minus strand; translated Scores for sequence family classification (score includes all domains): Model Description Score E-value N -------- ----------- ----- ------- --- Thioredoxin Thioredoxin -41.1 1 1 Parsed for domains: Model Domain seq-f seq-t hmm-f hmm-t score E-value -------- ------- ----- ----- ----- ----- ----- ------- Thioredoxin 1/1 6 75 .. 1 114 [] -41.1 1 Alignments of top-scoring domains: Thioredoxin: domain 1 of 1, from 6 to 75: score -41.1, E = 1 *->vvvvltdenFdeevlkaksdkpVLVdFyApWCGpCKmlAPeyeklAq + C++l Pe+e +A+ Rabbit4Lib 6 ---------------A------------------CQNLQPEWESFAE 19 eykgesd.dvkfaKVDaDenpkdlAskygVrgfPTlkffknGkkepvdyv d v + KVD++e++ l ++ +++ PT++ k+G+ y+ Rabbit4Lib 20 WGE---DlEVNVGKVDVTEQT-GLSGRFIITALPTIYHCKDGEF--RRYQ 63 gGArtkddLvafikkhlg<-* ++++L + l Rabbit4Lib 64 XA-KEQEGLHK-----LH 75 // Query: Rabbit4Lib.477.C1 367 67 254 nseq=2; minus strand; translated Scores for sequence family classification (score includes all domains): Model Description Score E-value N -------- ----------- ----- ------- --- [no hits above thresholds] Parsed for domains: Model Domain seq-f seq-t hmm-f hmm-t score E-value -------- ------- ----- ----- ----- ----- ----- ------- [no hits above thresholds] Alignments of top-scoring domains: [no hits above thresholds] // Query: Rabbit4Lib.479.C1 439 74 416 nseq=4; minus strand; translated Scores for sequence family classification (score includes all domains): Model Description Score E-value N -------- ----------- ----- ------- --- Endosulfine cAMP-regulated phosphoprotein/endosulfine 198.6 9.6e-56 1 Parsed for domains: Model Domain seq-f seq-t hmm-f hmm-t score E-value -------- ------- ----- ----- ----- ----- ----- ------- Endosulfine 1/1 12 101 .. 1 123 [] 198.6 9.6e-56 Alignments of top-scoring domains: Endosulfine: domain 1 of 1, from 12 to 101: score 198.6, E = 9.6e-56 *->eeeetvdasklsPeeaklyKLyakYPslGklPgkHkDlLrkrLQkGr ee+++++++++sPe+a+++KL+a+YP+lG++Pg+ +D+LrkrLQkG+ Rabbit4Lib 12 EEQKEMEDKVTSPEKAEEAKLKARYPHLGQKPGG-SDFLRKRLQKGQ 57 KYFDSGDYaLaKAgmankddVivNyskNNLPlTNPSkLREdIIkRRiSsQ KYFDSGDY++aKA+m+nk Q Rabbit4Lib 58 KYFDSGDYNMAKAKMKNK-------------------------------Q 76 lPSaasDkivvtGdieIptpetiPqr<-* lP+aa+Dk+ vtGd +Iptp+++Pqr Rabbit4Lib 77 LPTAAPDKTEVTGD-HIPTPQDLPQR 101 // Query: Rabbit4Lib.484.C1 1128 1 426 nseq=3; minus strand; translated Scores for sequence family classification (score includes all domains): Model Description Score E-value N -------- ----------- ----- ------- --- efhand EF hand 92.2 1.1e-23 3 Parsed for domains: Model Domain seq-f seq-t hmm-f hmm-t score E-value -------- ------- ----- ----- ----- ----- ----- ------- efhand 1/3 13 41 .. 1 29 [] 28.3 0.00018 efhand 2/3 49 77 .. 1 29 [] 34.3 2.8e-06 efhand 3/3 97 125 .. 1 29 [] 32.8 8e-06 Alignments of top-scoring domains: efhand: domain 1 of 3, from 13 to 41: score 28.3, E = 0.00018 *->elkeaFkefDkDgDGkIsfeEfkaalkkl<-* ++ +F+ fD++ DG+I+f Ef+ al+ + Rabbit4Lib 13 FAEHVFRTFDTNSDGTIDFREFIIALSVT 41 efhand: domain 2 of 3, from 49 to 77: score 34.3, E = 2.8e-06 *->elkeaFkefDkDgDGkIsfeEfkaalkkl<-* +lk aF+++D Dg+G+Is+ E++++++++ Rabbit4Lib 49 KLKWAFSMYDLDGNGYISRSEMLEIVQAI 77 efhand: domain 3 of 3, from 97 to 125: score 32.8, E = 8e-06 *->elkeaFkefDkDgDGkIsfeEfkaalkkl<-* + +++F+++D+++DGk+s+eEf+++ k+ Rabbit4Lib 97 RTDKIFRQMDTNNDGKLSLEEFIKGAKSD 125 // Query: Rabbit4Lib.485.C1 1133 1 1033 nseq=2; translated Scores for sequence family classification (score includes all domains): Model Description Score E-value N -------- ----------- ----- ------- --- Kazal_1 Kazal-type serine protease inhibitor domain 63.3 5.1e-15 1 Kazal_2 Kazal-type serine protease inhibitor domain 53.2 5.6e-12 1 Parsed for domains: Model Domain seq-f seq-t hmm-f hmm-t score E-value -------- ------- ----- ----- ----- ----- ----- ------- Kazal_1 1/1 122 175 .. 1 61 [] 63.3 5.1e-15 Kazal_2 1/1 121 175 .. 1 61 [] 53.2 5.6e-12 Alignments of top-scoring domains: Kazal_1: domain 1 of 1, from 122 to 175: score 63.3, E = 5.1e-15 *->CsrypnptskDGklvaCp..reydPVCGsDGvTYsNECeLkkaaCae C+++ + Cp+ + +d+VCG+D++TY + C L++++C + Rabbit4Lib 122 CQDPMT----------CPpaKLLDQVCGTDNQTYTSSCYLFATKCKL 158 nv.eqgtniekkhdGpC<-* +++++g++++++++G+C Rabbit4Lib 159 EGtKKGHQLQLDYFGAC 175 Kazal_2: domain 1 of 1, from 121 to 175: score 53.2, E = 5.6e-12 *->eCseyrsqvrNGlaCpreegydPVCGsDGckTYsNeCalgcanCkag +C+++ Cp+++ +d VCG+D+ TY++ C+l + +Ck++ Rabbit4Lib 121 VCQDPM-------TCPPAKLLDQVCGTDN-QTYTSSCYLFATKCKLE 159 fl.eg.elrlkydGeC<-* ++++g++l+l+y G+C Rabbit4Lib 160 GTkKGhQLQLDYFGAC 175 // Query: Rabbit4Lib.485.C2 1954 1 1550 nseq=27; translated Scores for sequence family classification (score includes all domains): Model Description Score E-value N -------- ----------- ----- ------- --- Kazal_1 Kazal-type serine protease inhibitor domain 63.3 5.1e-15 1 Kazal_2 Kazal-type serine protease inhibitor domain 53.2 5.6e-12 1 efhand EF hand 13.2 4.5 1 Parsed for domains: Model Domain seq-f seq-t hmm-f hmm-t score E-value -------- ------- ----- ----- ----- ----- ----- ------- Kazal_1 1/1 292 345 .. 1 61 [] 63.3 5.1e-15 Kazal_2 1/1 291 345 .. 1 61 [] 53.2 5.6e-12 efhand 1/1 462 490 .. 1 29 [] 13.2 4.5 Alignments of top-scoring domains: Kazal_1: domain 1 of 1, from 292 to 345: score 63.3, E = 5.1e-15 *->CsrypnptskDGklvaCp..reydPVCGsDGvTYsNECeLkkaaCae C+++ + Cp+ + +d+VCG+D++TY + C L++++C + Rabbit4Lib 292 CQDPMT----------CPpaKLLDQVCGTDNQTYTSSCYLFATKCKL 328 nv.eqgtniekkhdGpC<-* +++++g++++++++G+C Rabbit4Lib 329 EGtKKGHQLQLDYFGAC 345 Kazal_2: domain 1 of 1, from 291 to 345: score 53.2, E = 5.6e-12 *->eCseyrsqvrNGlaCpreegydPVCGsDGckTYsNeCalgcanCkag +C+++ Cp+++ +d VCG+D+ TY++ C+l + +Ck++ Rabbit4Lib 291 VCQDPM-------TCPPAKLLDQVCGTDN-QTYTSSCYLFATKCKLE 329 fl.eg.elrlkydGeC<-* ++++g++l+l+y G+C Rabbit4Lib 330 GTkKGhQLQLDYFGAC 345 efhand: domain 1 of 1, from 462 to 490: score 13.2, E = 4.5 *->elkeaFkefDkDgDGkIsfeEfkaalkkl<-* + ++F+e D ++D I+++E+ +++ + Rabbit4Lib 462 CITRFFEECDPNKDKHITLKEWGHCFGIK 490 // Query: Rabbit4Lib.486.C1 330 29 391 nseq=3; minus strand; translated Scores for sequence family classification (score includes all domains): Model Description Score E-value N -------- ----------- ----- ------- --- C1-set Immunoglobulin C1-set domain 132.3 8.7e-36 1 ig Immunoglobulin domain 55.9 8.8e-13 1 I-set Immunoglobulin I-set domain -31.9 4.6 1 Parsed for domains: Model Domain seq-f seq-t hmm-f hmm-t score E-value -------- ------- ----- ----- ----- ----- ----- ------- ig 1/1 39 103 .. 1 65 [] 55.9 8.8e-13 C1-set 1/1 32 113 .. 1 92 [] 132.3 8.7e-36 I-set 1/1 19 115 .. 1 97 [] -31.9 4.6 Alignments of top-scoring domains: ig: domain 1 of 1, from 39 to 103: score 55.9, E = 8.8e-13 *->GesvtLtCsvsgfgppdvtvtWlrngk.lt.gvlvtssenngdstyq G+++ L+C+vsgf+pp++++ +l+ng ++++ ++++ s n+++s+y Rabbit4Lib 39 GKPNFLNCYVSGFHPPQIDIELLKNGVkIEnVEQSDLSFNKDWSFYL 85 tsLtitnvtpeDggtYtCvv<-* L+ t++tp+D ++Y+C+v Rabbit4Lib 86 --LVHTEFTPNDKDEYSCRV 103 C1-set: domain 1 of 1, from 32 to 113: score 132.3, E = 8.7e-36 *->ppgspepelgkpntLvClVtgFyPpdItVtWlkNGqevtegvestep ++ +p+ e gkpn L+C+V+gF+Pp+I +++lkNG+++ + ++s+++ Rabbit4Lib 32 SR-HPA-ENGKPNFLNCYVSGFHPPQIDIELLKNGVKIENVEQSDLS 76 lpkngDgtYqlsSyLtftasepesgdsYtCrVeHesLkvenePlt<-* + n+D++++l+++ +ft p++ d+Y+CrV H +Lk eP+t Rabbit4Lib 77 F--NKDWSFYLLVHTEFT---PNDKDEYSCRVKHVTLK---EPMT 113 I-set: domain 1 of 1, from 19 to 115: score -31.9, E = 4.6 *->PkFtqkpkdveV......qeGesarfeCkVtGt..PePtVsWfKdGq + +q+ +v+V ++++ G++ ++ C V+G+++P+ +++ +K+G Rabbit4Lib 19 LECVQRAPNVQVysrhpaENGKPNFLNCYVSGFhpPQIDIELLKNGV 65 plssv..l.lpsdrfkvtydgGsgtytLtIsnvqpdDsGkYtCvAtNsaG ++ +v++++l+ f+ +++ y L+ + +p D +Y+C+++ Rabbit4Lib 66 KIENVeqSdLS---FNKDWSF----YLLVHTEFTPNDKDEYSCRVK---- 104 eaeasaeLtVq<-* ++ + tV+ Rabbit4Lib 105 HVTLKEPMTVK 115 // Query: Rabbit4Lib.486.C2 333 41 403 nseq=2; minus strand; translated Scores for sequence family classification (score includes all domains): Model Description Score E-value N -------- ----------- ----- ------- --- C1-set Immunoglobulin C1-set domain 132.3 8.7e-36 1 ig Immunoglobulin domain 55.9 8.8e-13 1 I-set Immunoglobulin I-set domain -31.9 4.6 1 Parsed for domains: Model Domain seq-f seq-t hmm-f hmm-t score E-value -------- ------- ----- ----- ----- ----- ----- ------- ig 1/1 39 103 .. 1 65 [] 55.9 8.8e-13 C1-set 1/1 32 113 .. 1 92 [] 132.3 8.7e-36 I-set 1/1 19 115 .. 1 97 [] -31.9 4.6 Alignments of top-scoring domains: ig: domain 1 of 1, from 39 to 103: score 55.9, E = 8.8e-13 *->GesvtLtCsvsgfgppdvtvtWlrngk.lt.gvlvtssenngdstyq G+++ L+C+vsgf+pp++++ +l+ng ++++ ++++ s n+++s+y Rabbit4Lib 39 GKPNFLNCYVSGFHPPQIDIELLKNGVkIEnVEQSDLSFNKDWSFYL 85 tsLtitnvtpeDggtYtCvv<-* L+ t++tp+D ++Y+C+v Rabbit4Lib 86 --LVHTEFTPNDKDEYSCRV 103 C1-set: domain 1 of 1, from 32 to 113: score 132.3, E = 8.7e-36 *->ppgspepelgkpntLvClVtgFyPpdItVtWlkNGqevtegvestep ++ +p+ e gkpn L+C+V+gF+Pp+I +++lkNG+++ + ++s+++ Rabbit4Lib 32 SR-HPA-ENGKPNFLNCYVSGFHPPQIDIELLKNGVKIENVEQSDLS 76 lpkngDgtYqlsSyLtftasepesgdsYtCrVeHesLkvenePlt<-* + n+D++++l+++ +ft p++ d+Y+CrV H +Lk eP+t Rabbit4Lib 77 F--NKDWSFYLLVHTEFT---PNDKDEYSCRVKHVTLK---EPMT 113 I-set: domain 1 of 1, from 19 to 115: score -31.9, E = 4.6 *->PkFtqkpkdveV......qeGesarfeCkVtGt..PePtVsWfKdGq + +q+ +v+V ++++ G++ ++ C V+G+++P+ +++ +K+G Rabbit4Lib 19 LECVQRAPNVQVysrhpaENGKPNFLNCYVSGFhpPQIDIELLKNGV 65 plssv..l.lpsdrfkvtydgGsgtytLtIsnvqpdDsGkYtCvAtNsaG ++ +v++++l+ f+ +++ y L+ + +p D +Y+C+++ Rabbit4Lib 66 KIENVeqSdLS---FNKDWSF----YLLVHTEFTPNDKDEYSCRVK---- 104 eaeasaeLtVq<-* ++ + tV+ Rabbit4Lib 105 HVTLKEPMTVK 115 // Query: Rabbit4Lib.487.C1 198 1 326 nseq=2; minus strand; translated Scores for sequence family classification (score includes all domains): Model Description Score E-value N -------- ----------- ----- ------- --- [no hits above thresholds] Parsed for domains: Model Domain seq-f seq-t hmm-f hmm-t score E-value -------- ------- ----- ----- ----- ----- ----- ------- [no hits above thresholds] Alignments of top-scoring domains: [no hits above thresholds] // Query: Rabbit4Lib.491.C1 754 86 550 nseq=5; minus strand; translated Scores for sequence family classification (score includes all domains): Model Description Score E-value N -------- ----------- ----- ------- --- eIF-5a Eukaryotic initiation factor 5A hypusine, DN 118.5 1.2e-31 1 KOW KOW motif 28.7 0.00013 1 Parsed for domains: Model Domain seq-f seq-t hmm-f hmm-t score E-value -------- ------- ----- ----- ----- ----- ----- ------- KOW 1/1 25 59 .. 1 40 [] 28.7 0.00013 eIF-5a 1/1 83 150 .. 1 72 [] 118.5 1.2e-31 Alignments of top-scoring domains: KOW: domain 1 of 1, from 25 to 59: score 28.7, E = 0.00013 *->fkkGdvVrVisGpfkGkkGkVvevdpkk.G.HGslknrVvve<-* ++k+ V+ kG+++k+ve +++k+G+HG++k V++ Rabbit4Lib 25 LRKNGFVVL-----KGRPCKIVEMSTSKtGkHGHAK--VHLV 59 eIF-5a: domain 1 of 1, from 83 to 150: score 118.5, E = 1.2e-31 *->nVkRreYQlldIqEDGfLsLmDlEsGEtKeDLkLPegdnLgkeIegl n+kR++ Ql++Iq DG+LsL+ sGE++eDL+LPegd LgkeIe++ Rabbit4Lib 83 NIKRNDFQLIGIQ-DGYLSLLQD-SGEVREDLRLPEGD-LGKEIEQK 126 feeGkGDllVsVisAmGeEaivrvK<-* + G+ + l++V sAm eEa+v++K Rabbit4Lib 127 YDCGE-EILITVLSAMTEEAAVAIK 150 // Query: Rabbit4Lib.491.C2 521 157 658 nseq=2; minus strand; translated Scores for sequence family classification (score includes all domains): Model Description Score E-value N -------- ----------- ----- ------- --- eIF-5a Eukaryotic initiation factor 5A hypusine, DN 118.5 1.2e-31 1 KOW KOW motif 11.8 5.1 1 Parsed for domains: Model Domain seq-f seq-t hmm-f hmm-t score E-value -------- ------- ----- ----- ----- ----- ----- ------- KOW 1/1 37 71 .. 1 40 [] 11.8 5.1 eIF-5a 1/1 95 162 .. 1 72 [] 118.5 1.2e-31 Alignments of top-scoring domains: KOW: domain 1 of 1, from 37 to 71: score 11.8, E = 5.1 *->fkkGdvVrVisGpfkGkkGkVvevdpkk.G.HGslknrVvve<-* + k+ V+ kG k+ve +++k+G+HG++k V++ Rabbit4Lib 37 ISKNGFVVL-----KGXAMKIVEMSTSKtGkHGHAK--VHLV 71 eIF-5a: domain 1 of 1, from 95 to 162: score 118.5, E = 1.2e-31 *->nVkRreYQlldIqEDGfLsLmDlEsGEtKeDLkLPegdnLgkeIegl n+kR++ Ql++Iq DG+LsL+ sGE++eDL+LPegd LgkeIe++ Rabbit4Lib 95 NIKRNDFQLIGIQ-DGYLSLLQD-SGEVREDLRLPEGD-LGKEIEQK 138 feeGkGDllVsVisAmGeEaivrvK<-* + G+ + l++V sAm eEa+v++K Rabbit4Lib 139 YDCGE-EILITVLSAMTEEAAVAIK 162 // Query: Rabbit4Lib.492.C1 1285 1 1029 nseq=8; minus strand; translated Scores for sequence family classification (score includes all domains): Model Description Score E-value N -------- ----------- ----- ------- --- Ldh_1_C lactate/malate dehydrogenase, alpha/beta C 246.4 3.8e-70 1 Ldh_1_N lactate/malate dehydrogenase, NAD binding 219.4 5.5e-62 1 ATP-synt_C ATP synthase subunit C -21.5 7.7 1 Parsed for domains: Model Domain seq-f seq-t hmm-f hmm-t score E-value -------- ------- ----- ----- ----- ----- ----- ------- ATP-synt_C 1/1 21 66 .. 1 70 [] -21.5 7.7 Ldh_1_N 1/1 13 162 .. 1 153 [] 219.4 5.5e-62 Ldh_1_C 1/1 164 339 .. 1 181 [] 246.4 3.8e-70 Alignments of top-scoring domains: ATP-synt_C: domain 1 of 1, from 21 to 66: score -21.5, E = 7.7 *->aavIGAGlAiglaalGaGiGiGivggaliegiARqPElrgqLftkmi a+ I+ +l iG+G v+g+ qP Rabbit4Lib 21 AGQIAYSLLY-------SIGNGSVFGK------DQP----------- 43 igvalvEaiaiygLviAflllfa<-* i++ l +++++ g+ ++l+ Rabbit4Lib 44 IILLLLDITPMMGVLDGVLMELQ 66 Ldh_1_N: domain 1 of 1, from 13 to 162: score 219.4, E = 5.5e-62 *->tKVaVvGAGGgVGsslAfalanlqgladEqpIiLvLvDinkamdkae ++V V+GA+G++++sl++++ n+++++++qpIiL L+Di ++m +++ Rabbit4Lib 13 IRVLVTGAAGQIAYSLLYSIGNGSVFGKDQPIILLLLDITPMMGVLD 59 GvamDLqHgsaflsvpgiiggdqdyealkDaDvVvItAGvpqkPGeTRlD Gv m+Lq+++++l+ +i++++ +++a+kD Dv+++++ +p+++G++R D Rabbit4Lib 60 GVLMELQDCALPLLKDVITTDK-EEVAFKDLDVAILVGSMPRREGMERKD 108 LlnrNakIfksivpaiaksapd.aivlVvsNPVDiltyiawkvsKKaGlp Ll++N+kIfks++ a++k+a+++++v+Vv+NP++++++ a k + +++ Rabbit4Lib 109 LLKANVKIFKSQGAALDKYAKKsVKVIVVGNPANTNCLTASKSA---PSI 155 kervigs<-* +++++ + Rabbit4Lib 156 PKENFSC 162 Ldh_1_C: domain 1 of 1, from 164 to 339: score 246.4, E = 3.8e-70 *->TnLDtaRfrtllAeklgvkdPrsvhvyiiGEHGDsevPvWShAnvgG T+LD++R++ ++A klgv+++ +++v i+G+H+++++P+ +hA+v Rabbit4Lib 164 TRLDHNRAKSQIALKLGVTADDVKNVIIWGNHSSTQYPDVNHAKVKL 210 vpleslvkelgedsddeleelierVqdaAyeVIeaKaGaGsTtysiAlAl +++e v+e+ +d+++ + e+i +Vq+++++VI+a++ s+++s+A+A+ Rabbit4Lib 211 QGKEVGVYEALKDDSWLKGEFITTVQQRGAAVIKARK--LSSAMSAAKAI 258 AriaeaiLrdtpEnrvlpvsvyldGf.yGipddelvyfsvPvvLgrnGve A+++++i+++tpE++ ++++v++dG++yGipdd +s+Pvv++ n + Rabbit4Lib 259 ADHVRDIWFGTPEGEFVSMGVISDGNsYGIPDD--LLYSFPVVIK-NKTW 305 evvegllpLndeEreklekSadtLkkiiekgfafv<-* ++veg lp+nd++rek+ +a++L +++e +f+f+ Rabbit4Lib 306 KFVEG-LPINDFSREKMDLTAKELAEEKETAFEFL 339 // Query: Rabbit4Lib.493.C1 321 162 363 nseq=2; minus strand; translated Scores for sequence family classification (score includes all domains): Model Description Score E-value N -------- ----------- ----- ------- --- [no hits above thresholds] Parsed for domains: Model Domain seq-f seq-t hmm-f hmm-t score E-value -------- ------- ----- ----- ----- ----- ----- ------- [no hits above thresholds] Alignments of top-scoring domains: [no hits above thresholds] // Query: Rabbit4Lib.494.C1 507 29 445 nseq=2; minus strand; translated Scores for sequence family classification (score includes all domains): Model Description Score E-value N -------- ----------- ----- ------- --- [no hits above thresholds] Parsed for domains: Model Domain seq-f seq-t hmm-f hmm-t score E-value -------- ------- ----- ----- ----- ----- ----- ------- [no hits above thresholds] Alignments of top-scoring domains: [no hits above thresholds] // Query: Rabbit4Lib.495.C1 780 69 888 nseq=5; minus strand; translated Scores for sequence family classification (score includes all domains): Model Description Score E-value N -------- ----------- ----- ------- --- Ribosomal_L18p Ribosomal L18p/L5e family 263.1 3.7e-75 1 Parsed for domains: Model Domain seq-f seq-t hmm-f hmm-t score E-value -------- ------- ----- ----- ----- ----- ----- ------- Ribosomal_L18p 1/1 26 173 .. 1 146 [] 263.1 3.7e-75 Alignments of top-scoring domains: Ribosomal_L18p: domain 1 of 1, from 26 to 173: score 263.1, E = 3.7e-75 *->gkrrrrerrrlrvrrklkgtaerPRLvVrrSNkhiyAQiiddtkggt gk+++++r+rl++++k+k++++++R++Vr +N++i++Qi + +++g+ Rabbit4Lib 26 GKTDYYARKRLVIQDKNKYNTPKYRMIVRVTNRDIICQIAYARIEGD 72 lvsAStlskeLkkyglkgggtNtaaAylvGlLiAeRalkklGLD.tYkGi + +++++++eL+kyg k+g+tN+aaAy++GlL+A+R+l+++G D++Y+G+ Rabbit4Lib 73 MIVCAAYAHELPKYGVKVGLTNYAAAYCTGLLLARRLLNRFGMDkIYEGQ 122 eEvtGEdylvE.vedgPrPFkavvvfDrgGytYHGRVfAlAdgArEaGLk +EvtG++y+vE++++ P++F++ ++ +++++t++++Vf++++gA+++GL Rabbit4Lib 123 VEVTGDEYNVEsIDGQPGAFTCYLDAGLARTTTGNKVFGALKGAVDGGLS 172 f<-* + Rabbit4Lib 173 I 173 // Query: Rabbit4Lib.503.C1 571 71 722 nseq=2; minus strand; translated Scores for sequence family classification (score includes all domains): Model Description Score E-value N -------- ----------- ----- ------- --- PDZ PDZ domain (Also known as DHR or GLGF) 56.0 8.2e-13 1 Parsed for domains: Model Domain seq-f seq-t hmm-f hmm-t score E-value -------- ------- ----- ----- ----- ----- ----- ------- PDZ 1/1 113 190 .. 1 82 [] 56.0 8.2e-13 Alignments of top-scoring domains: PDZ: domain 1 of 1, from 113 to 190: score 56.0, E = 8.2e-13 *->evtlekevkrgglGfsikggsdkgivvsevlpGsgaAeagGrLkeGD ev+l k+ + g++G+++k+ ++ gi+v v+++ ++A G L+ GD Rabbit4Lib 113 EVILCKD-QDGKIGLRLKSIDN-GIFVQLVQAN-SPASLVG-LRFGD 155 qIlsvNGqdvenlsheravlalkgsggsevtLtil<-* q+l++NG++ +++s ++a ++lk++ g+++t+ti+ Rabbit4Lib 156 QVLQINGENCAGWSSDKAHKVLKQAFGEKITMTIR 190 // Query: Rabbit4Lib.503.C2 411 76 639 nseq=9; minus strand; translated Scores for sequence family classification (score includes all domains): Model Description Score E-value N -------- ----------- ----- ------- --- PDZ PDZ domain (Also known as DHR or GLGF) 83.4 4.5e-21 2 Parsed for domains: Model Domain seq-f seq-t hmm-f hmm-t score E-value -------- ------- ----- ----- ----- ----- ----- ------- PDZ 1/2 3 80 .. 1 82 [] 56.0 8.2e-13 PDZ 2/2 87 159 .. 1 82 [] 28.8 0.00012 Alignments of top-scoring domains: PDZ: domain 1 of 2, from 3 to 80: score 56.0, E = 8.2e-13 *->evtlekevkrgglGfsikggsdkgivvsevlpGsgaAeagGrLkeGD ev+l k+ + g++G+++k+ ++ gi+v v+++ ++A G L+ GD Rabbit4Lib 3 EVILCKD-QDGKIGLRLKSIDN-GIFVQLVQAN-SPASLVG-LRFGD 45 qIlsvNGqdvenlsheravlalkgsggsevtLtil<-* q+l++NG++ +++s ++a ++lk++ g+++t+ti+ Rabbit4Lib 46 QVLQINGENCAGWSSDKAHKVLKQAFGEKITMTIR 80 PDZ: domain 2 of 2, from 87 to 159: score 28.8, E = 0.00012 *->evtlekevkrgglGfsikggsdkgivvsevlpGsgaAeagGrLkeGD ++t++k+ + g +Gf k +++++++ ++A++ G L + Rabbit4Lib 87 TITMHKD-STGHVGFIFK-----NGKITSIVKD-SSAARNG-LLTEH 125 qIlsvNGqdvenlsheravlalkgsggsevtLtil<-* I ++NGq+v +l + +++++l sg+ +vt+ti+ Rabbit4Lib 126 NICEINGQNVIGLKDSQIADILSTSGT-VVTITIM 159 // Query: Rabbit4Lib.506.C1 1177 1 808 nseq=2; minus strand; translated Scores for sequence family classification (score includes all domains): Model Description Score E-value N -------- ----------- ----- ------- --- Tubulin_C Tubulin/FtsZ family, C-terminal domain 277.0 2.4e-79 1 Parsed for domains: Model Domain seq-f seq-t hmm-f hmm-t score E-value -------- ------- ----- ----- ----- ----- ----- ------- Tubulin_C 1/1 69 214 .. 1 155 [] 277.0 2.4e-79 Alignments of top-scoring domains: Tubulin_C: domain 1 of 1, from 69 to 214: score 277.0, E = 2.4e-79 *->lNvDladvrtnLvPfPRlHFammGyaPlsgkg.aehralsVleltrq lNvDl +++tnLvP+PR+HF++ yaP++++++a h++lsV+e+t++ Rabbit4Lib 69 LNVDLTEFQTNLVPYPRIHFPLATYAPVISAEkAYHEQLSVAEITNA 115 afdspnlmvavdprhkkGaygalanItgrgdvslkEvneaierireknsd +f++ n+mv++dprh G+y+a+++ ++rgdv++k+vn+ai++i++k+s Rabbit4Lib 116 CFEPANQMVKCDPRH--GKYMACCL-LYRGDVVPKDVNAAIATIKTKRS- 161 aqFVeWapiifktaiddeppygvrvsvdLAkv.vsgvmtGNtTaksasgd +qFV+W+p++fk++i+++pp++v+++ dLAkv+++++m++NtTa Rabbit4Lib 162 IQFVDWCPTGFKVGINYQPPTVVPGG-DLAKVqRAVCMLSNTTA------ 204 Iqelfkrile<-* I+e+++r+++ Rabbit4Lib 205 IAEAWARLDH 214 // Query: Rabbit4Lib.506.C2 137 496 635 nseq=3; translated Scores for sequence family classification (score includes all domains): Model Description Score E-value N -------- ----------- ----- ------- --- [no hits above thresholds] Parsed for domains: Model Domain seq-f seq-t hmm-f hmm-t score E-value -------- ------- ----- ----- ----- ----- ----- ------- [no hits above thresholds] Alignments of top-scoring domains: [no hits above thresholds] // Query: Rabbit4Lib.506.C3 1093 1 738 nseq=21; minus strand; translated Scores for sequence family classification (score includes all domains): Model Description Score E-value N -------- ----------- ----- ------- --- Tubulin_C Tubulin/FtsZ family, C-terminal domain 275.1 8.9e-79 1 Parsed for domains: Model Domain seq-f seq-t hmm-f hmm-t score E-value -------- ------- ----- ----- ----- ----- ----- ------- Tubulin_C 1/1 42 187 .. 1 155 [] 275.1 8.9e-79 Alignments of top-scoring domains: Tubulin_C: domain 1 of 1, from 42 to 187: score 275.1, E = 8.9e-79 *->lNvDladvrtnLvPfPRlHFammGyaPlsgkg.aehralsVleltrq lNvDl +++tnLvP+PR+HF++ yaP++++++a h++lsV+e+t++ Rabbit4Lib 42 LNVDLTEFQTNLVPYPRIHFPLATYAPVISAEkAYHEQLSVAEITNA 88 afdspnlmvavdprhkkGaygalanItgrgdvslkEvneaierireknsd +f++ n+mv++dprh G+y+a+++ ++rgdv++k+vn+ai++i++k++ Rabbit4Lib 89 CFEPANQMVKCDPRH--GKYMACCL-LYRGDVVPKDVNAAIATIKTKRT- 134 aqFVeWapiifktaiddeppygvrvsvdLAkv.vsgvmtGNtTaksasgd +qFV+W+p++fk++i+++pp++v+++ dLAkv+++++m++NtTa Rabbit4Lib 135 IQFVDWCPTGFKVGINYQPPTVVPGG-DLAKVqRAVCMLSNTTA------ 177 Iqelfkrile<-* I+e+++r+++ Rabbit4Lib 178 IAEAWARLDH 187 // Query: Rabbit4Lib.507.C2 139 1 207 nseq=3; minus strand; translated Scores for sequence family classification (score includes all domains): Model Description Score E-value N -------- ----------- ----- ------- --- Arf ADP-ribosylation factor family -56.2 0.00013 1 Parsed for domains: Model Domain seq-f seq-t hmm-f hmm-t score E-value -------- ------- ----- ----- ----- ----- ----- ------- Arf 1/1 1 65 [. 1 186 [] -56.2 0.00013 Alignments of top-scoring domains: Arf: domain 1 of 1, from 1 to 65: score -56.2, E = 0.00013 *->gflkiflkllglwnKEmRILiLGLDnAGKTTILykLklgevvttiPT + + ++ Rabbit4Lib 1 PRVRRMQYYWL------------------------------------ 11 iGFNvEtveyknvkFtvWDvGGQeslRPlWrnYfpnTdavIfVVDSaDrd Rabbit4Lib - -------------------------------------------------- - RieeakeELhaLLneeeLadaplLilANKQDlpgAlseaEireaLgLhel +ANKQDlp+A+ +E++++LgL++l Rabbit4Lib 12 -------------------------FANKQDLPNAMAISEMTDKLGLQSL 36 kgskgkVtlegdRpWeiqgcsAvkGeGLyEGldWLsnni<-* + + R W++q+++A+ G GLyEGldWLsn + Rabbit4Lib 37 R-N---------RTWYVQATCATQGTGLYEGLDWLSNEL 65 // Query: Rabbit4Lib.509.C1 251 289 444 nseq=2; minus strand; translated Scores for sequence family classification (score includes all domains): Model Description Score E-value N -------- ----------- ----- ------- --- [no hits above thresholds] Parsed for domains: Model Domain seq-f seq-t hmm-f hmm-t score E-value -------- ------- ----- ----- ----- ----- ----- ------- [no hits above thresholds] Alignments of top-scoring domains: [no hits above thresholds] // Query: Rabbit4Lib.510.C1 209 127 456 nseq=3; translated Scores for sequence family classification (score includes all domains): Model Description Score E-value N -------- ----------- ----- ------- --- [no hits above thresholds] Parsed for domains: Model Domain seq-f seq-t hmm-f hmm-t score E-value -------- ------- ----- ----- ----- ----- ----- ------- [no hits above thresholds] Alignments of top-scoring domains: [no hits above thresholds] // Query: Rabbit4Lib.512.C1 761 125 1049 nseq=2; minus strand; translated Scores for sequence family classification (score includes all domains): Model Description Score E-value N -------- ----------- ----- ------- --- [no hits above thresholds] Parsed for domains: Model Domain seq-f seq-t hmm-f hmm-t score E-value -------- ------- ----- ----- ----- ----- ----- ------- [no hits above thresholds] Alignments of top-scoring domains: [no hits above thresholds] // Query: Rabbit4Lib.517.C1 171 100 262 nseq=2; translated Scores for sequence family classification (score includes all domains): Model Description Score E-value N -------- ----------- ----- ------- --- [no hits above thresholds] Parsed for domains: Model Domain seq-f seq-t hmm-f hmm-t score E-value -------- ------- ----- ----- ----- ----- ----- ------- [no hits above thresholds] Alignments of top-scoring domains: [no hits above thresholds] // Query: Rabbit4Lib.517.C2 173 221 280 nseq=2; translated Scores for sequence family classification (score includes all domains): Model Description Score E-value N -------- ----------- ----- ------- --- [no hits above thresholds] Parsed for domains: Model Domain seq-f seq-t hmm-f hmm-t score E-value -------- ------- ----- ----- ----- ----- ----- ------- [no hits above thresholds] Alignments of top-scoring domains: [no hits above thresholds] // Query: Rabbit4Lib.518.C1 358 41 343 nseq=2; minus strand; translated Scores for sequence family classification (score includes all domains): Model Description Score E-value N -------- ----------- ----- ------- --- [no hits above thresholds] Parsed for domains: Model Domain seq-f seq-t hmm-f hmm-t score E-value -------- ------- ----- ----- ----- ----- ----- ------- [no hits above thresholds] Alignments of top-scoring domains: [no hits above thresholds] // Query: Rabbit4Lib.520.C2 1175 1 865 nseq=2; minus strand; translated Scores for sequence family classification (score includes all domains): Model Description Score E-value N -------- ----------- ----- ------- --- ig Immunoglobulin domain 41.7 1.6e-08 2 I-set Immunoglobulin I-set domain 29.0 5.6e-05 1 V-set Immunoglobulin V-set domain 6.1 0.15 1 Parsed for domains: Model Domain seq-f seq-t hmm-f hmm-t score E-value -------- ------- ----- ----- ----- ----- ----- ------- ig 1/2 56 113 .. 1 65 [] 24.7 0.0021 ig 2/2 145 211 .. 1 65 [] 17.0 0.45 V-set 1/1 130 224 .. 1 130 [] 6.1 0.15 I-set 1/1 131 227 .. 1 97 [] 29.0 5.6e-05 Alignments of top-scoring domains: ig: domain 1 of 2, from 56 to 113: score 24.7, E = 0.0021 *->GesvtLtCsvsgfgppdvtvtWlrngk.lt.gvlvtssenngdstyq + tL+C +++++ ++ +W++ng +lt + s + Rabbit4Lib 56 ALPITLQCNLTSSSHTLTHSYWTKNGVeLTaTRKNASNME------- 95 tsLtitnvtpeDggtYtCvv<-* +i++ + eD+g+Y+Cv Rabbit4Lib 96 --YRINKPRAEDSGEYYCVF 113 ig: domain 2 of 2, from 145 to 211: score 17.0, E = 0.45 *->GesvtLtCsvsgfgppdvtvtWlrngk.lt.gvlvtssenngdstyq G+++ + C + g p+++ W++ ++ + + ts +++++ Rabbit4Lib 145 GQDAVMYCKS--VGYPHPEWLWRKKENgVLmDLVNTS-----GRFFI 184 t......sLtitnvtpe.DggtYtCvv<-* +++++ + L+itn++ ++D g+Y C + Rabbit4Lib 185 InkenytELSITNLQISeDPGEYECNA 211 V-set: domain 1 of 1, from 130 to 224: score 6.1, E = 0.15 *->qstvtqepprLLLASLfWptsvtvaeGgsvtLpCtysGtfddsssss + ++t+ + r s ++eG+++ + C+ ++ Rabbit4Lib 130 APDITG-HKR----------SENKNEGQDAVMYCKSV----GY---- 157 gtgsvyWyrqqppGekpeliiisyytyysysegngtvserfkgrvrfsgn + + W + + ++ + ++ +++g++ k++++ Rabbit4Lib 158 PHPEWLWRK--KENGVLMDLV----------NTSGRFFIINKENYT---- 191 pskgdfsLtIsnlqls.DsGtYyCa.....gggtrLtVl<-* L+I+nlq s+D G Y C ++ g+ ++t+l Rabbit4Lib 192 -E-----LSITNLQISeDPGEYECNatnaiGSAAVVTIL 224 I-set: domain 1 of 1, from 131 to 227: score 29.0, E = 5.6e-05 *->PkFtqkpkdveVqeGesarfeCkVtGtPePtVsWfKdGqplssvl.l P +t + ++ + +eG++a++ Ck G+P P+ W K+ + +l Rabbit4Lib 131 PDITGHKRSENKNEGQDAVMYCKSVGYPHPEWLWRKKENGVLMDLvN 177 psdrfkvtydgGsgtytLtIsnvqp.dDsGkYtCvAtNsaGeaeasaeLt s+rf + +++ + + L I n q+++D G+Y C AtN G+a + L Rabbit4Lib 178 TSGRFFIINKE--NYTELSITNLQIsEDPGEYECNATNAIGSAAVVTILR 225 Vq<-* V+ Rabbit4Lib 226 VR 227 // Query: Rabbit4Lib.523.C1 Scores for sequence family classification (score includes all domains): Model Description Score E-value N -------- ----------- ----- ------- --- [no hits above thresholds] Parsed for domains: Model Domain seq-f seq-t hmm-f hmm-t score E-value -------- ------- ----- ----- ----- ----- ----- ------- [no hits above thresholds] Alignments of top-scoring domains: [no hits above thresholds] // Query: Rabbit4Lib.524.C1 229 1 370 nseq=4; minus strand; translated Scores for sequence family classification (score includes all domains): Model Description Score E-value N -------- ----------- ----- ------- --- [no hits above thresholds] Parsed for domains: Model Domain seq-f seq-t hmm-f hmm-t score E-value -------- ------- ----- ----- ----- ----- ----- ------- [no hits above thresholds] Alignments of top-scoring domains: [no hits above thresholds] // Query: Rabbit4Lib.526.C1 654 43 621 nseq=2; minus strand; translated Scores for sequence family classification (score includes all domains): Model Description Score E-value N -------- ----------- ----- ------- --- Peptidase_S24 Peptidase S24-like 37.9 2.2e-07 1 Parsed for domains: Model Domain seq-f seq-t hmm-f hmm-t score E-value -------- ------- ----- ----- ----- ----- ----- ------- Peptidase_S24 1/1 63 135 .. 1 84 [] 37.9 2.2e-07 Alignments of top-scoring domains: Peptidase_S24: domain 1 of 1, from 63 to 135: score 37.9, E = 2.2e-07 *->rVpGdSMiatePtildGDlllVd..ktsYgfgSlPlipgepkrGDiV +V ++SM eP ++ GDll+ + +++ +++ G+iV Rabbit4Lib 63 VVLSGSM---EPAFHRGDLLFLTnfRED-----------PIRAGEIV 95 Varlpgd...yvKRli....glpgdivllpsnnanykydpiyingk<-* V++++g + ++v+R+i+ ++++ gdi +k+d+ ++++ Rabbit4Lib 96 VFKVEGRdipIVHRVIkvheKDNGDIKF------LTKGDNNEVDDR 135 // Query: Rabbit4Lib.529.C1 469 1 458 nseq=5; minus strand; translated Scores for sequence family classification (score includes all domains): Model Description Score E-value N -------- ----------- ----- ------- --- TFR_dimer Transferrin receptor-like dimerisation doma 229.9 3.8e-65 1 Parsed for domains: Model Domain seq-f seq-t hmm-f hmm-t score E-value -------- ------- ----- ----- ----- ----- ----- ------- TFR_dimer 1/1 14 151 .. 1 147 [] 229.9 3.8e-65 Alignments of top-scoring domains: TFR_dimer: domain 1 of 1, from 14 to 151: score 229.9, E = 3.8e-65 *->qsllkdlpqqlgdllklgslslqkLvsavkkfkeaaskltqrigtve +++++ + q++ k++++s+++L+sav++f+e+ask+++r+++++ Rabbit4Lib 14 YNISMQHLQEM----KTYGVSFDSLFSAVENFTEIASKFNERLQDFD 56 epSldpinvrmDiNdrLmllEraFlnPrGvlPgrsfYrHVlfgPslhnsy ++ +pi +r+ +Nd+Lm+lEraF++P+G lP+r+fYrHV+++P++hn+y Rabbit4Lib 57 KT--NPILLRI-VNDQLMFLERAFIDPLG-LPDRPFYRHVIYAPNSHNKY 102 sGsafpgildaltkisskddgaskawaevqrQlsiaataLqgaAntLrev +G +fpgi+dal++i +k d+ skaw ev++Q++iaa+++q+aA tLrev Rabbit4Lib 103 AGVSFPGIYDALFDIVNKEDP-SKAWEEVKKQIAIAAFTVQAAAGTLREV 151 <-* Rabbit4Lib - - // Query: Rabbit4Lib.529.C2 832 1 835 nseq=2; minus strand; translated Scores for sequence family classification (score includes all domains): Model Description Score E-value N -------- ----------- ----- ------- --- PA PA domain 69.4 7.7e-17 1 Parsed for domains: Model Domain seq-f seq-t hmm-f hmm-t score E-value -------- ------- ----- ----- ----- ----- ----- ------- PA 1/1 21 115 .. 1 111 [] 69.4 7.7e-17 Alignments of top-scoring domains: PA: domain 1 of 1, from 21 to 115: score 69.4, E = 7.7e-17 *->sp.ggktgpLVyagdgsnsdfsaCesrpgsldpkdvkGKIVLcdrGg sp+g +g+LVy+++++++df+ ++ +++ + +GKIV++++G Rabbit4Lib 21 SPqGMPEGELVYVNYARTEDFF----KLERDMKINCSGKIVIARYGK 63 csfaeKaanAqaAGAaGvIiynnpddglevmapetdsndkkdpdshgiPa + ++ K++nAq AGA+GvI+y++p+d++ p + ++ Rabbit4Lib 64 VFRGNKVKNAQLAGAIGVILYSDPADYFA-------------PGVESFQM 100 vfvskedGeallsyi<-* +++s e + Rabbit4Lib 101 AGISLEVVSNVEMXL 115 // Query: Rabbit4Lib.530.C1 977 1 337 nseq=2; minus strand; translated Scores for sequence family classification (score includes all domains): Model Description Score E-value N -------- ----------- ----- ------- --- [no hits above thresholds] Parsed for domains: Model Domain seq-f seq-t hmm-f hmm-t score E-value -------- ------- ----- ----- ----- ----- ----- ------- [no hits above thresholds] Alignments of top-scoring domains: [no hits above thresholds] // Query: Rabbit4Lib.531.C1 2625 14 1534 nseq=2; minus strand; translated Scores for sequence family classification (score includes all domains): Model Description Score E-value N -------- ----------- ----- ------- --- eIF-3_zeta Eukaryotic translation initiation factor 3 1068.7 0 1 Parsed for domains: Model Domain seq-f seq-t hmm-f hmm-t score E-value -------- ------- ----- ----- ----- ----- ----- ------- eIF-3_zeta 1/1 1 463 [. 1 608 [] 1068.7 0 Alignments of top-scoring domains: eIF-3_zeta: domain 1 of 1, from 1 to 463: score 1068.7, E = 0 *->lakFelpevafNesGWGPcevpdvsssAsPtsvAAAnLfkDPVPYqp Rabbit4Lib - ----------------------------------------------- - FSKgDRLGKvADWtgaqpFYRRndkrReqrGrksdfaavfrnkvYasafG Rabbit4Lib - -------------------------------------------------- - aGsqysYfHeeDEssFqLVDtarpqrtkpyqrngRfrplhnrrnlrqerd +sFqLVDtar+q+t+ yqr +R+r +++rnlr+++d Rabbit4Lib 1 -------------TSFQLVDTARTQKTA-YQR-NRMR--FAQRNLRRDKD 33 rrgrgnqglNlrilsssakggakavkaekerarnaRqgqrGmGrRfGikd rr+++ ++Nl+ l++s ak++++e++r+++++q+q+G+ r+++ Rabbit4Lib 34 RRNML--QFNLQTLPKS----AKQKERERIRLQKKFQKQFGV-RQKW--- 73 rgkeqklReSSVeVrpDWvvlEEmdFsrLsKLsLpnikeGvDiGDetCGs ++k+qk+R+SSVeVr+DW+v+EEmdF++L+K+++++++e++Di e+CG+ Rabbit4Lib 74 DQKSQKPRDSSVEVRSDWEVKEEMDFPQLLKMRYLEVSEPQDI--ECCGA 121 LeYYDKlfDRItvKNEkPLqrikdRvfytVTTTDDPVIRrLAketkGNVF LeYYDK+fDRIt+++EkPL++i +R+f+tVTTTDDPVIR+LAk t+GNVF Rabbit4Lib 122 LEYYDKAFDRITTRSEKPLRSI-KRIFHTVTTTDDPVIRKLAK-TQGNVF 169 aTDaILAtLMCaTRSVYSWDIViqrvGdKLFFDKRdgsdfLnPvDlLTVn aTDaILAtLM++TRSVYSWDIV+qrvG+KLFFDKRd+sdf DlLTV+ Rabbit4Lib 170 ATDAILATLMSCTRSVYSWDIVVQRVGSKLFFDKRDNSDF----DLLTVS 215 ETSvEPPmdddnREsiNSarsLAvEAtYINqNFsqQVLrrgdeEPKykFe ET++EPP+d++n s+NS+r+LA+E IN+NFsqQ+L +e +y+F+ Rabbit4Lib 216 ETANEPPQDEGN--SFNSPRNLAMEXDIINHNFSQQCLEWXKE--RYNFP 261 epNAPFvnededkeeiASvaYrYRkWdLgddvDeKPVkLvaRCElDGViq +pN PFv++d+dk+eiA YrYR+W+Lgdd+ +L++RCE+DGV++ Rabbit4Lib 262 NPN-PFVEDDMDKNEIAXRWYRYRRWKLGDDI-----DLIVRCEHDGVMT 305 gpnnevqFltIKALNEwDSKfsNvtGgVDWRqKLDtQRGAVlATELKNNs g+n+ev+F++IK+LNEwDS+++N gVDWRqKLD+QRGAV+ATELKNNs Rabbit4Lib 306 GANGEVSFINIKTLNEWDSRHCN---GVDWRQKLDSQRGAVIATELKNNS 352 cKLAkWTvqALLAGSDqlKLGYVSRvNpRDhqrHvILgtqqfKPkEFAsQ +KLA+WT++ALLAGS++lKLGYVSR++++D++rHvILgtqqfKP+EFAsQ Rabbit4Lib 353 YKLARWTCCALLAGSEYLKLGYVSRYHVKDSSRHVILGTQQFKPNEFASQ 402 INLnmdNaWGILRciiDlCMKlkdGKYLLmKDPnkPviRLYsvPpnTFes INL+++NaWGILRc+iD+CMKl++GKYL++KDPnk+viR+Ys+P++TF+s Rabbit4Lib 403 INLSVENAWGILRCVIDICMKLEEGKYLILKDPNKQVIRVYSLPDGTFSS 452 dedeeeEeede<-* ded+++Eee+e Rabbit4Lib 453 DEDDDDEEEEE 463 // Query: Rabbit4Lib.532.C1 393 264 873 nseq=3; translated Scores for sequence family classification (score includes all domains): Model Description Score E-value N -------- ----------- ----- ------- --- [no hits above thresholds] Parsed for domains: Model Domain seq-f seq-t hmm-f hmm-t score E-value -------- ------- ----- ----- ----- ----- ----- ------- [no hits above thresholds] Alignments of top-scoring domains: [no hits above thresholds] // Query: Rabbit4Lib.537.C1 153 1 99 nseq=2; minus strand; translated Scores for sequence family classification (score includes all domains): Model Description Score E-value N -------- ----------- ----- ------- --- [no hits above thresholds] Parsed for domains: Model Domain seq-f seq-t hmm-f hmm-t score E-value -------- ------- ----- ----- ----- ----- ----- ------- [no hits above thresholds] Alignments of top-scoring domains: [no hits above thresholds] // Query: Rabbit4Lib.538.C2 257 1 370 nseq=2; minus strand; translated Scores for sequence family classification (score includes all domains): Model Description Score E-value N -------- ----------- ----- ------- --- HCaRG HCaRG protein -10.9 0.088 1 Parsed for domains: Model Domain seq-f seq-t hmm-f hmm-t score E-value -------- ------- ----- ----- ----- ----- ----- ------- HCaRG 1/1 18 123 .] 1 196 [] -10.9 0.088 Alignments of top-scoring domains: HCaRG: domain 1 of 1, from 18 to 123: score -10.9, E = 0.088 *->lslLkkldseqlrqLlsvifekLlgqaeselseeeeellaaleklaa l++++++ds+++++Ll+ +f++Ll++ +e a+++++ Rabbit4Lib 18 LADPGSFDSNAFTLLLRAAFQSLLDAQADE----------AVLDHPD 54 sasvppeelkhllaglstllksalklPkhslkpdelqqqLkeqlgLdeel +++++p lkh++a+ +t + +a+k h +++++l+++L e++++d+e+ Rabbit4Lib 55 LKHIDPVVLKHCHAAAATYILEAGK---HRVDKSTLSSYL-EDCKFDRER 100 aedlskvykshrkelreslsqqslslpsAqlsdlqWRvdvqlsSsalars ++++++ y++++++lr+ p + + Rabbit4Lib 101 IDLFCTEYQNNKNSLRN---------P-------------------TGKH 122 kgsPsvlLqLklvnndgqsveavtfElsleeLqeLlnkLeealkeleal< k Rabbit4Lib 123 K------------------------------------------------ 123 -* Rabbit4Lib - - // Query: Rabbit4Lib.539.C1 438 58 476 nseq=3; minus strand; translated Scores for sequence family classification (score includes all domains): Model Description Score E-value N -------- ----------- ----- ------- --- [no hits above thresholds] Parsed for domains: Model Domain seq-f seq-t hmm-f hmm-t score E-value -------- ------- ----- ----- ----- ----- ----- ------- [no hits above thresholds] Alignments of top-scoring domains: [no hits above thresholds] // Query: Rabbit4Lib.540.C1 435 49 282 nseq=2; minus strand; translated Scores for sequence family classification (score includes all domains): Model Description Score E-value N -------- ----------- ----- ------- --- PhnA_Zn_Ribbon PhnA Zinc-Ribbon 3.7 2.4 1 Parsed for domains: Model Domain seq-f seq-t hmm-f hmm-t score E-value -------- ------- ----- ----- ----- ----- ----- ------- PhnA_Zn_Ribbon 1/1 1 39 [. 1 43 [] 3.7 2.4 Alignments of top-scoring domains: PhnA_Zn_Ribbon: domain 1 of 1, from 1 to 39: score 3.7, E = 2.4 *->tllRcqPkCPkCnSeytYtvyavpps.......tedgallvCpeCah + PkCPkC e +++ ++ ++ + l C++C+ Rabbit4Lib 1 -M----PKCPKCDKEVYF------AErvtslgkDWHRPCLKCEKCGK 36 EWs<-* + Rabbit4Lib 37 TLT 39 // Query: Rabbit4Lib.545.C1 278 1 377 nseq=3; minus strand; translated Scores for sequence family classification (score includes all domains): Model Description Score E-value N -------- ----------- ----- ------- --- Thioredoxin Thioredoxin 82.5 8.6e-21 1 Parsed for domains: Model Domain seq-f seq-t hmm-f hmm-t score E-value -------- ------- ----- ----- ----- ----- ----- ------- Thioredoxin 1/1 1 108 [. 1 114 [] 82.5 8.6e-21 Alignments of top-scoring domains: Thioredoxin: domain 1 of 1, from 1 to 108: score 82.5, E = 8.6e-21 *->vvvvltdenFdeevlkaksdkpVLVdFyApWCGpCKmlAPeyeklAq + ++++F+e+vl++ + ++VdFyApWCGpC+++APe+e lA Rabbit4Lib 1 --XHASAQTFNEKVLQG--KNHWVVDFYAPWCGPCQNFAPEFELLAR 43 eykgesddvkfaKVDaDenpkdlAskygVrgfPTlkff.knGkk.epvdy kg +vk KVD+ + +++k g++++PT k++ + k+++ ++ Rabbit4Lib 44 LIKG---KVKAGKVDCQAYA-QTCQKAGIKAYPTVKLYlYDRTKrNIWEE 89 vgGArtkddLvafikkhlg<-* ++ r++ +++ i+ l+ Rabbit4Lib 90 QIHSRDAKAIATLIDGKLE 108 // Query: Rabbit4Lib.547.C1 151 1 122 nseq=2; minus strand; translated Scores for sequence family classification (score includes all domains): Model Description Score E-value N -------- ----------- ----- ------- --- [no hits above thresholds] Parsed for domains: Model Domain seq-f seq-t hmm-f hmm-t score E-value -------- ------- ----- ----- ----- ----- ----- ------- [no hits above thresholds] Alignments of top-scoring domains: [no hits above thresholds] // Query: Rabbit4Lib.553.C1 860 1 1174 nseq=3; minus strand; translated Scores for sequence family classification (score includes all domains): Model Description Score E-value N -------- ----------- ----- ------- --- [no hits above thresholds] Parsed for domains: Model Domain seq-f seq-t hmm-f hmm-t score E-value -------- ------- ----- ----- ----- ----- ----- ------- [no hits above thresholds] Alignments of top-scoring domains: [no hits above thresholds] // Query: Rabbit4Lib.555.C1 343 1 499 nseq=2; translated Scores for sequence family classification (score includes all domains): Model Description Score E-value N -------- ----------- ----- ------- --- [no hits above thresholds] Parsed for domains: Model Domain seq-f seq-t hmm-f hmm-t score E-value -------- ------- ----- ----- ----- ----- ----- ------- [no hits above thresholds] Alignments of top-scoring domains: [no hits above thresholds] // Query: Rabbit4Lib.558.C1 727 1 1075 nseq=2; minus strand; translated Scores for sequence family classification (score includes all domains): Model Description Score E-value N -------- ----------- ----- ------- --- Tyrosinase Common central domain of tyrosinase 309.2 4.9e-89 1 Parsed for domains: Model Domain seq-f seq-t hmm-f hmm-t score E-value -------- ------- ----- ----- ----- ----- ----- ------- Tyrosinase 1/1 3 289 .. 1 399 [] 309.2 4.9e-89 Alignments of top-scoring domains: Tyrosinase: domain 1 of 1, from 3 to 289: score 309.2, E = 4.9e-89 *->gctvkrtnccppnipdlstkekdfkfpsldqlakrtrhpahvvygdt +++ + +++ + ++l ++v + Rabbit4Lib 3 ASAL-FGHTITQ-------------SKRL-----------FLV---R 21 eylakykkaigsmkqlakisiyPrgFkqqAnyhcaYCdgaylgsGkpewd ++ a k + l k+ Rabbit4Lib 22 GRKALVK-----LIFLMKDX------------------------------ 36 lelqvHeSwlFlpwHRwYLyfyEriLgklinAvAqkFPvEGGLRAkYvAA +Fl+wHR++L+ +Er+++++++ Rabbit4Lib 37 ---------AFLTWHRYHLLQLERDMQEMLQ------------------- 58 dptFALPYWnWdhpkgvCDiCtDemrGgesptlPtllsdegsslydswrn +ptF+LPYWn++++k+ CDiCtD+m+G+e+ ls+ +s++++wr+ Rabbit4Lib 59 EPTFSLPYWNFATGKNICDICTDDMMGSEKQLRFQSLSP--NSVFSQWRV 106 vchrledYnslptlidltyeGperrspvrhdn..rltrlpedqdiennLs vc +ledY++l+tl+++t++Gp+rr+p++++++++++rlpe+qd++++L+ Rabbit4Lib 107 VCESLEDYDTLGTLCNSTENGPIRRNPAGNVArpMVQRLPEPQDVTQCLE 156 lmyrqmvsnnsknallffgnpleggdkpdpntnGagtienepvHNpvHiw + +++++ +++n++++f+n++eg+++p+ G+++++++++HN+ H++ Rabbit4Lib 157 VGVFDTPP-FYSNSTNSFRNTVEGYSAPT----GKYDPAVRSLHNLAHLF 201 tGgntksnlPngisngedMgsfysAanDPIFylHHsnVDRlWsiWkalgg ++g ++g++++++nDPIF+l+H+++D+++++W+++++ Rabbit4Lib 202 LNG--------------TGGQTHLSPNDPIFVLLHTFTDAVFDEWLRRYN 237 ksFrtdfpekdwlnshfrfYdenpfppErvkvrDcfdtstdklGYdYedq ++ +++fp ++++++h+r+Y+++pf+p + ++ ++f+t++d+lGY+Ye q Rabbit4Lib 238 AD-ISTFPLENAPIGHNRQYNMVPFWP-PITNIEMFVTAPDNLGYTYEVQ 285 ltpw<-* ++ Rabbit4Lib 286 WPGQ 289 // Query: Rabbit4Lib.558.C2 399 1 484 nseq=3; minus strand; translated Scores for sequence family classification (score includes all domains): Model Description Score E-value N -------- ----------- ----- ------- --- [no hits above thresholds] Parsed for domains: Model Domain seq-f seq-t hmm-f hmm-t score E-value -------- ------- ----- ----- ----- ----- ----- ------- [no hits above thresholds] Alignments of top-scoring domains: [no hits above thresholds] // Query: Rabbit4Lib.566.C1 97 596 646 nseq=2; minus strand; translated Scores for sequence family classification (score includes all domains): Model Description Score E-value N -------- ----------- ----- ------- --- [no hits above thresholds] Parsed for domains: Model Domain seq-f seq-t hmm-f hmm-t score E-value -------- ------- ----- ----- ----- ----- ----- ------- [no hits above thresholds] Alignments of top-scoring domains: [no hits above thresholds] // Query: Rabbit4Lib.567.C2 199 1 302 nseq=3; minus strand; translated Scores for sequence family classification (score includes all domains): Model Description Score E-value N -------- ----------- ----- ------- --- Ras Ras family -30.9 3.9e-06 1 Parsed for domains: Model Domain seq-f seq-t hmm-f hmm-t score E-value -------- ------- ----- ----- ----- ----- ----- ------- Ras 1/1 5 69 .. 1 174 [] -30.9 3.9e-06 Alignments of top-scoring domains: Ras: domain 1 of 1, from 5 to 69: score -30.9, E = 3.9e-06 *->KlVlvGDgGVGKSsLliRFtdnkFpeeYipTIGvDFytktvevdgkt Rabbit4Lib - ----------------------------------------------- - vkLqIWDTAGQErFralrpaYYRgAqGfLLVYDITsrdSFenvkkWleei Rabbit4Lib - -------------------------------------------------- - lrhadkdenvpivLVGNKcDLeddedlelekqkRqVsteeGealAkelgA +r+a+ env ++LVGNKcDL k++V++ +++++A++lg Rabbit4Lib 5 DRYAS--ENVNKLLVGNKCDLTT---------KKVVDYTTAKEFADSLG- 42 lpFmETSAKtneNVeeaFeelareilk<-* +pF+ETSAK+++NVe+ F+++a ei+k Rabbit4Lib 43 IPFLETSAKNATNVEQSFMTMAAEIKK 69 // Query: Rabbit4Lib.568.C1 347 1 513 nseq=2; minus strand; translated Scores for sequence family classification (score includes all domains): Model Description Score E-value N -------- ----------- ----- ------- --- AAA ATPase family associated with various cellul 137.5 2.4e-37 1 Parsed for domains: Model Domain seq-f seq-t hmm-f hmm-t score E-value -------- ------- ----- ----- ----- ----- ----- ------- AAA 1/1 1 137 [. 1 216 [] 137.5 2.4e-37 Alignments of top-scoring domains: AAA: domain 1 of 1, from 1 to 137: score 137.5, E = 2.4e-37 *->gvLLyGPPGtGKTlLAkavAnelgvpfisisgselvskyvGesekrv v Rabbit4Lib 1 ---------------------------------PRV----------- 3 ralfelArkslkkaaPspiiFIDEiDalapkRgd....egdvssrvvnqL r + +P+ iiF+DEiDa++++R++++++ +++++r++++L Rabbit4Lib 4 -------RDH----QPC-IIFMDEIDAIGGRRFSegtsADREIQRTLMEL 41 LtemDLerigfekhylrgsdvvDlsnvlviaaTNrpdlldpaLlrpGRfd L++mD gf++ l++v +i+aTNrpd+ldpaLlrpGR+d Rabbit4Lib 42 LNQMD----GFDT----------LHRVKMIMATNRPDTLDPALLRPGRLD 77 reievplPdeeerleIlkihlkkmplalcqelselakdvdleelaeelAr r+i ++lP+e++rl Ilkih+ ++ ++ +++d+e+ +++ Rabbit4Lib 78 RKIHIDLPNEQARLDILKIHAGPITKH---------GEIDYEA----IVK 114 rtpgfsgadlaalcreAalralr<-* +++gf+gadl+++c+eA+++a+r Rabbit4Lib 115 LSDGFNGADLRNVCTEAGMFAIR 137 // Query: Rabbit4Lib.569.C1 135 1 194 nseq=2; minus strand; translated Scores for sequence family classification (score includes all domains): Model Description Score E-value N -------- ----------- ----- ------- --- UCR_UQCRX_QCR9 Ubiquinol-cytochrome C reductase, UQCR 102.4 9e-27 1 Parsed for domains: Model Domain seq-f seq-t hmm-f hmm-t score E-value -------- ------- ----- ----- ----- ----- ----- ------- UCR_UQCRX_QCR9 1/1 8 63 .. 1 57 [] 102.4 9e-27 Alignments of top-scoring domains: UCR_UQCRX_QCR9: domain 1 of 1, from 8 to 63: score 102.4, E = 9e-27 *->lsvlYktlfRRnSvfvgtIivGAFfferAfDvgvdslwEsnNkGKlW ++v + + R+S+f++tI+vGA+fferAfD+g+d+++E++N GKlW Rabbit4Lib 8 FEVV-LLAVPRTSTFALTIVVGALFFERAFDQGADAIYEHINQGKLW 53 kDIkaryenk<-* k+Ik++yenk Rabbit4Lib 54 KHIKHKYENK 63 // Query: Rabbit4Lib.570.C1 625 58 327 nseq=2; minus strand; translated Scores for sequence family classification (score includes all domains): Model Description Score E-value N -------- ----------- ----- ------- --- LEA_4 Late embryogenesis abundant protein 2.0 3.3 1 Parsed for domains: Model Domain seq-f seq-t hmm-f hmm-t score E-value -------- ------- ----- ----- ----- ----- ----- ------- LEA_4 1/1 18 82 .. 1 74 [] 2.0 3.3 Alignments of top-scoring domains: LEA_4: domain 1 of 1, from 18 to 82: score 2.0, E = 3.3 *->ekAkeaadsAkek.akeakdaakdKAgeAkdaakekAeeakdkakek ekA e a A e ke ++ak+ ++ A +a kA+e +dk+ Rabbit4Lib 18 EKATEGAVHAVEEvVKEVVEHAKEAGEKALGEALKKAQESGDKV--- 61 kageaKDtgnkakdkaeeaKdkaadakd<-* K+ ++ ++ +++ ++++ a++ Rabbit4Lib 62 V----KE---VTEKVSHTVTEAVTHAAE 82 // Query: Rabbit4Lib.570.C2 547 1 286 nseq=2; minus strand; translated Scores for sequence family classification (score includes all domains): Model Description Score E-value N -------- ----------- ----- ------- --- LEA_4 Late embryogenesis abundant protein 2.0 3.3 1 Parsed for domains: Model Domain seq-f seq-t hmm-f hmm-t score E-value -------- ------- ----- ----- ----- ----- ----- ------- LEA_4 1/1 24 88 .. 1 74 [] 2.0 3.3 Alignments of top-scoring domains: LEA_4: domain 1 of 1, from 24 to 88: score 2.0, E = 3.3 *->ekAkeaadsAkek.akeakdaakdKAgeAkdaakekAeeakdkakek ekA e a A e ke ++ak+ ++ A +a kA+e +dk+ Rabbit4Lib 24 EKATEGAVHAVEEvVKEVVEHAKEAGEKALGEALKKAQESGDKV--- 67 kageaKDtgnkakdkaeeaKdkaadakd<-* K+ ++ ++ +++ ++++ a++ Rabbit4Lib 68 V----KE---VTEKVSHTVTEAVTHAAE 88 // Query: Rabbit4Lib.571.C1 143 962 1066 nseq=2; translated Scores for sequence family classification (score includes all domains): Model Description Score E-value N -------- ----------- ----- ------- --- [no hits above thresholds] Parsed for domains: Model Domain seq-f seq-t hmm-f hmm-t score E-value -------- ------- ----- ----- ----- ----- ----- ------- [no hits above thresholds] Alignments of top-scoring domains: [no hits above thresholds] // Query: Rabbit4Lib.574.C1 53 1 399 nseq=2; minus strand; translated Scores for sequence family classification (score includes all domains): Model Description Score E-value N -------- ----------- ----- ------- --- NDUF_B4 NADH-ubiquinone oxidoreductase B15 subunit ( 334.1 1.6e-96 1 Parsed for domains: Model Domain seq-f seq-t hmm-f hmm-t score E-value -------- ------- ----- ----- ----- ----- ----- ------- NDUF_B4 1/1 8 132 .] 1 125 [] 334.1 1.6e-96 Alignments of top-scoring domains: NDUF_B4: domain 1 of 1, from 8 to 132: score 334.1, E = 1.6e-96 *->kYrpsrlvsLPatLDPAeYdislEtRrAqAERLAIRarLKReYlLQy kY+psrl +LP tLDPAeYdis+EtR+AqAERLAIR+rLKReYlLQy Rabbit4Lib 8 KYKPSRLATLPSTLDPAEYDISPETRQAQAERLAIRSRLKREYLLQY 54 ndPkrrgvIEdPALlRWdYARtaNvYPnFRPtpKtSlLGAlfgiGPllFw ndP+rrg+IEdPAL+RW+YAR+aN+YPnFRPtpK+SlLGAl giGPl Fw Rabbit4Lib 55 NDPSRRGLIEDPALIRWTYARSANIYPNFRPTPKNSLLGALLGIGPLFFW 104 yyvfKTeRDRKEKliqeGkldrtfalsy<-* yyvfKT+RD+K Kli eGkldrtf++sy Rabbit4Lib 105 YYVFKTDRDKKGKLIREGKLDRTFNISY 132 // Query: Rabbit4Lib.577.C1 548 1 685 nseq=3; minus strand; translated Scores for sequence family classification (score includes all domains): Model Description Score E-value N -------- ----------- ----- ------- --- Pro_isomerase Cyclophilin type peptidyl-prolyl cis-tr 304.3 1.5e-87 1 Parsed for domains: Model Domain seq-f seq-t hmm-f hmm-t score E-value -------- ------- ----- ----- ----- ----- ----- ------- Pro_isomerase 1/1 15 181 .. 1 175 [] 304.3 1.5e-87 Alignments of top-scoring domains: Pro_isomerase: domain 1 of 1, from 15 to 181: score 304.3, E = 1.5e-87 *->kVyFDieiGgkpaGRIvfeLfgdvvPkTveNFraLctgekGfGsGKk V+FD++iGg+ +GR +eLf+dvvPkT+eNFr+ ctge+ G + Rabbit4Lib 15 VVFFDVSIGGQEVGRMKIELFADVVPKTAENFRQFCTGEFRKD-GVP 60 LhYkGStFHRVIPnFMiQGGDFtegnGtGGkSIYGekkPFkDEnfnlkhd + YkGStFHRVI++FMiQGGDF +g+GtG SIY F+DEnf+l+h Rabbit4Lib 61 IGYKGSTFHRVIKDFMIQGGDFVNGDGTGVASIYRGP--FADENFKLRHS 108 rpGlLSMANAGknTNGSQFFIttvktpWLDGKHVVFGkVvddeGMdVVkk pGlLSMAN G+ TNG+QFFIt k++WLDGKHVVFGk + +G+ V +k Rabbit4Lib 109 APGLLSMANSGPSTNGCQFFITCSKCDWLDGKHVVFGKII--DGLLVMRK 156 IesvgtdsgdmyqnkpskeVvIadc.gel<-* Ie+v+t ++ kp+ +VvI + g + Rabbit4Lib 157 IENVPTGPNN----KPKLPVVIXTVwGDV 181 // Query: Rabbit4Lib.578.C1 874 49 462 nseq=2; minus strand; translated Scores for sequence family classification (score includes all domains): Model Description Score E-value N -------- ----------- ----- ------- --- Ribosomal_L28e Ribosomal L28e protein family 275.0 1e-78 1 Parsed for domains: Model Domain seq-f seq-t hmm-f hmm-t score E-value -------- ------- ----- ----- ----- ----- ----- ------- Ribosomal_L28e 1/1 2 128 .. 1 133 [] 275.0 1e-78 Alignments of top-scoring domains: Ribosomal_L28e: domain 1 of 1, from 2 to 128: score 275.0, E = 1e-78 *->SddLiWqvVRnNskFLvKrngignsKvqFStEpfNlkavnskrysGL S++L+W+vVRn+s+FL+Krn+++ +StEp+Nlka+ns+ry+GL Rabbit4Lib 2 SAHLQWMVVRNCSSFLIKRNKQT-----YSTEPNNLKARNSFRYNGL 43 aNkKAvgVqAaadrkaVlVvtkkkkeqnKPaksykkDsilnkevrasvks +++K+vgV++aad+k+V+Vv k++++q+KPa+sy++ +++nk++ra+++s Rabbit4Lib 44 IHRKTVGVEPAADGKGVVVVMKRRSGQRKPATSYVR-TTINKNARATLSS 92 iAkaivrnkYrpdlkrrAvaraSAilksqKVkktka<-* i+++i++nkYrpdl+++A++raSAil+sqK++++k+ Rabbit4Lib 93 IRHMIRKNKYRPDLRMAAIRRASAILRSQKPVMVKR 128 // Query: Rabbit4Lib.578.C2 826 1 444 nseq=2; minus strand; translated Scores for sequence family classification (score includes all domains): Model Description Score E-value N -------- ----------- ----- ------- --- Ribosomal_L28e Ribosomal L28e protein family 275.0 1e-78 1 Parsed for domains: Model Domain seq-f seq-t hmm-f hmm-t score E-value -------- ------- ----- ----- ----- ----- ----- ------- Ribosomal_L28e 1/1 12 138 .. 1 133 [] 275.0 1e-78 Alignments of top-scoring domains: Ribosomal_L28e: domain 1 of 1, from 12 to 138: score 275.0, E = 1e-78 *->SddLiWqvVRnNskFLvKrngignsKvqFStEpfNlkavnskrysGL S++L+W+vVRn+s+FL+Krn+++ +StEp+Nlka+ns+ry+GL Rabbit4Lib 12 SAHLQWMVVRNCSSFLIKRNKQT-----YSTEPNNLKARNSFRYNGL 53 aNkKAvgVqAaadrkaVlVvtkkkkeqnKPaksykkDsilnkevrasvks +++K+vgV++aad+k+V+Vv k++++q+KPa+sy++ +++nk++ra+++s Rabbit4Lib 54 IHRKTVGVEPAADGKGVVVVMKRRSGQRKPATSYVR-TTINKNARATLSS 102 iAkaivrnkYrpdlkrrAvaraSAilksqKVkktka<-* i+++i++nkYrpdl+++A++raSAil+sqK++++k+ Rabbit4Lib 103 IRHMIRKNKYRPDLRMAAIRRASAILRSQKPVMVKR 138 // Query: Rabbit4Lib.579.C1 192 59 701 nseq=4; translated Scores for sequence family classification (score includes all domains): Model Description Score E-value N -------- ----------- ----- ------- --- [no hits above thresholds] Parsed for domains: Model Domain seq-f seq-t hmm-f hmm-t score E-value -------- ------- ----- ----- ----- ----- ----- ------- [no hits above thresholds] Alignments of top-scoring domains: [no hits above thresholds] // Query: Rabbit4Lib.579.C2 375 49 663 nseq=3; minus strand; translated Scores for sequence family classification (score includes all domains): Model Description Score E-value N -------- ----------- ----- ------- --- Ribosomal_L15e Ribosomal L15 384.1 1.4e-111 1 Parsed for domains: Model Domain seq-f seq-t hmm-f hmm-t score E-value -------- ------- ----- ----- ----- ----- ----- ------- Ribosomal_L15e 1/1 2 193 .. 1 193 [] 384.1 1.4e-111 Alignments of top-scoring domains: Ribosomal_L15e: domain 1 of 1, from 2 to 193: score 384.1, E = 1.4e-111 *->GaYkYvrElwkkkqsdvireLlrvRlweyRqlpavvRleRPTRpDkA GaYkY++Elw+kkqsdv+r+LlrvR+w+yRql+a++R++RPTRpDkA Rabbit4Lib 2 GAYKYIQELWRKKQSDVMRFLLRVRCWQYRQLSALHRAPRPTRPDKA 48 RrLGYKAKqGfvVyRvRVRRGGrkrpvpkggtYGKPktlgvNklkpkksl RrLGYKAKqG+v+yR+RVRRGGrkrpvpkg+tYGKP +gvN+lk+++sl Rabbit4Lib 49 RRLGYKAKQGYVIYRIRVRRGGRKRPVPKGATYGKPVHHGVNQLKFARSL 98 qaiAEERagRklpnlrVLNSYWvgeDgtYKyfEVILVDpsHpAIrrDPqi q++AEERagR ++ lrVLNSYWvgeD+tYK+fEVIL+Dps I+ +i Rabbit4Lib 99 QSVAEERAGRHCGALRVLNSYWVGEDSTYKFFEVILIDPS---IKPSEEI 145 nWic....kpvhkhRelRGLTSaGkKsRGLRgKGkgasktRpssrRanwk ++++++ ++ + LTSaG+KsRGL gKG++++ t+++srRa+w+ Rabbit4Lib 146 LTPSgspsQSTSTGKCVX-LTSAGRKSRGL-GKGHKFHHTIGGSRRAAWR 193 <-* Rabbit4Lib - - // Query: Rabbit4Lib.579.C3 188 562 832 nseq=2; translated Scores for sequence family classification (score includes all domains): Model Description Score E-value N -------- ----------- ----- ------- --- [no hits above thresholds] Parsed for domains: Model Domain seq-f seq-t hmm-f hmm-t score E-value -------- ------- ----- ----- ----- ----- ----- ------- [no hits above thresholds] Alignments of top-scoring domains: [no hits above thresholds] // Query: Rabbit4Lib.579.C4 372 1 477 nseq=2; translated Scores for sequence family classification (score includes all domains): Model Description Score E-value N -------- ----------- ----- ------- --- [no hits above thresholds] Parsed for domains: Model Domain seq-f seq-t hmm-f hmm-t score E-value -------- ------- ----- ----- ----- ----- ----- ------- [no hits above thresholds] Alignments of top-scoring domains: [no hits above thresholds] // Query: Rabbit4Lib.586.C1 769 572 1498 nseq=2; minus strand; translated Scores for sequence family classification (score includes all domains): Model Description Score E-value N -------- ----------- ----- ------- --- zf-C2H2 Zinc finger, C2H2 type 187.8 1.8e-52 9 zf-BED BED zinc finger 1.2 2.2 1 zf-MIZ MIZ zinc finger -11.6 2.1 1 zf-GRF GRF zinc finger -11.7 7.7 1 PHD PHD-finger -15.3 8.2 1 FYVE FYVE zinc finger -21.8 1.6 1 Parsed for domains: Model Domain seq-f seq-t hmm-f hmm-t score E-value -------- ------- ----- ----- ----- ----- ----- ------- zf-C2H2 1/9 24 46 .. 1 24 [] 32.6 9.1e-06 zf-BED 1/1 9 47 .. 1 52 [] 1.2 2.2 zf-C2H2 2/9 52 74 .. 1 24 [] 33.6 4.5e-06 zf-MIZ 1/1 33 91 .. 1 53 [] -11.6 2.1 zf-GRF 1/1 52 96 .. 1 52 [] -11.7 7.7 zf-C2H2 3/9 80 102 .. 1 24 [] 34.3 2.7e-06 zf-C2H2 4/9 133 155 .. 1 24 [] 30.3 4.6e-05 zf-C2H2 5/9 161 183 .. 1 24 [] 33.4 5.1e-06 PHD 1/1 134 197 .. 1 51 [] -15.3 8.2 FYVE 1/1 124 200 .. 1 77 [] -21.8 1.6 zf-C2H2 6/9 189 211 .. 1 24 [] 23.5 0.0049 zf-C2H2 7/9 217 234 .. 1 24 [] 2.8 52 zf-C2H2 8/9 248 267 .. 1 24 [] 15.1 1.7 zf-C2H2 9/9 273 295 .. 1 24 [] 24.2 0.0031 Alignments of top-scoring domains: zf-C2H2: domain 1 of 9, from 24 to 46: score 32.6, E = 9.1e-06 *->ykCpfdCgksFsrksnLkrHlrtH<-* y+C+ +C k+Fs k nL+ H+++H Rabbit4Lib 24 YECD-ECRKTFSLKQNLTEHMKMH 46 zf-BED: domain 1 of 1, from 9 to 47: score 1.2, E = 2.2 *->SkvWkhFtkveeeedgkevegkakCkhCgkklsrkkksGTsnLirHL S++ +h + + e+ +C C+k++s k nL+ H+ Rabbit4Lib 9 SDLLQHDQIH-TGEKP------YECDECRKTFSLK-----QNLTEHM 43 rrkHp<-* + +H Rabbit4Lib 44 K-MHT 47 zf-C2H2: domain 2 of 9, from 52 to 74: score 33.6, E = 4.5e-06 *->ykCpfdCgksFsrksnLkrHlrtH<-* ++C+ +Cgk+Fsr s+L+ Hl++H Rabbit4Lib 52 HECT-ECGKVFSRVSSLTVHLKSH 74 zf-MIZ: domain 1 of 1, from 33 to 91: score -11.6, E = 2.1 *->vSLnCPls.ktRmktPakghdCk...HlQCF....DllsyLqmNekk +SL+ l++ ++m t k+h+C++ +++ F++ + l+ L++ +k Rabbit4Lib 33 FSLKQNLTeHMKMHTGEKAHECTecgKV--FsrvsSLTVHLKSHTGK 77 PTWqCPvCnknaky<-* ++ C C k ++ Rabbit4Lib 78 KSYKCNKCGKAFSQ 91 zf-GRF: domain 1 of 1, from 52 to 96: score -11.7, E = 7.7 *->plCpgCGeqlavl..ltVrKtGpNkGRkFYkCplpresqktekqCnF + C+ CG ++++++ltV + G+k YkC ++ + F Rabbit4Lib 52 HECTECGKVFSRVssLTVH-LKSHTGKKSYKCNKCGKA--------F 89 FqWeDen<-* q + Rabbit4Lib 90 SQKGNLL 96 [output cut off at A = 5 top alignments] // Query: Rabbit4Lib.589.C1 1038 1 1045 nseq=3; minus strand; translated Scores for sequence family classification (score includes all domains): Model Description Score E-value N -------- ----------- ----- ------- --- TPR_1 Tetratricopeptide repeat 86.8 4.2e-22 3 TPR_2 Tetratricopeptide repeat 64.7 1.9e-15 3 Parsed for domains: Model Domain seq-f seq-t hmm-f hmm-t score E-value -------- ------- ----- ----- ----- ----- ----- ------- TPR_1 1/3 136 169 .. 1 34 [] 20.5 0.039 TPR_2 1/3 136 169 .. 1 34 [] 19.6 0.075 TPR_1 2/3 175 208 .. 1 34 [] 33.8 3.9e-06 TPR_2 2/3 175 208 .. 1 34 [] 20.4 0.043 TPR_1 3/3 209 242 .. 1 34 [] 32.5 9.4e-06 TPR_2 3/3 209 242 .. 1 34 [] 24.7 0.0022 Alignments of top-scoring domains: TPR_1: domain 1 of 3, from 136 to 169: score 20.5, E = 0.039 *->aeayynlGnaylklgkydeAieayekALeldPnn<-* + ++ Gn ++k+g+y eA+ y +AL++ P++ Rabbit4Lib 136 STRLKEEGNEQFKKGDYIEAESSYSQALQMCPSC 169 TPR_2: domain 1 of 3, from 136 to 169: score 19.6, E = 0.075 *->aealynlGlayyklgdyeeAleayekAleldPnn<-* l G+ +k+gdy eA+ y +Al+ P++ Rabbit4Lib 136 STRLKEEGNEQFKKGDYIEAESSYSQALQMCPSC 169 TPR_1: domain 2 of 3, from 175 to 208: score 33.8, E = 3.9e-06 *->aeayynlGnaylklgkydeAieayekALeldPnn<-* + + n+++a +k+ k d Ai ++ kA++l+P++ Rabbit4Lib 175 SILFSNRAAARMKQDKKDMAISDCSKAIQLNPSY 208 TPR_2: domain 2 of 3, from 175 to 208: score 20.4, E = 0.043 *->aealynlGlayyklgdyeeAleayekAleldPnn<-* + n++ a +k+ + + A+ ++ kA++l+P++ Rabbit4Lib 175 SILFSNRAAARMKQDKKDMAISDCSKAIQLNPSY 208 TPR_1: domain 3 of 3, from 209 to 242: score 32.5, E = 9.4e-06 *->aeayynlGnaylklgkydeAieayekALeldPnn<-* +a +++ +y+k+ k+deA+e+y+ +Le dP+ Rabbit4Lib 209 IRAILRRAELYEKMDKLDEALEDYKSVLEKDPSI 242 [output cut off at A = 5 top alignments] // Query: Rabbit4Lib.594.C1 483 15 486 nseq=2; minus strand; translated Scores for sequence family classification (score includes all domains): Model Description Score E-value N -------- ----------- ----- ------- --- Ribosomal_S13_N Ribosomal S13/S15 N-terminal domain 123.5 3.8e-33 1 Ribosomal_S15 Ribosomal protein S15 108.6 1.2e-28 1 Parsed for domains: Model Domain seq-f seq-t hmm-f hmm-t score E-value -------- ------- ----- ----- ----- ----- ----- ------- Ribosomal_S13_N 1/1 1 57 [. 1 60 [] 123.5 3.8e-33 Ribosomal_S15 1/1 62 148 .. 1 88 [] 108.6 1.2e-28 Alignments of top-scoring domains: Ribosomal_S13_N: domain 1 of 1, from 1 to 57: score 123.5, E = 3.8e-33 *->MaRMHsrgkGkSgSarPyrrepPeWlkyspeeVeelIvkLaKkGltP MH++gkG S+Sa+Pyrr++P+Wlk+++++V+e+I kLaKkGltP Rabbit4Lib 1 ---MHAPGKGLSQSALPYRRSVPTWLKLTSDDVKEQIYKLAKKGLTP 44 SqIGviLRDqYGI<-* SqIGviLRD++G+ Rabbit4Lib 45 SQIGVILRDSHGV 57 Ribosomal_S15: domain 1 of 1, from 62 to 148: score 108.6, E = 1.2e-28 *->makgliiseflkeekdtGSvEvQvalLTerivrLrkHleeHkKDysS ++g++i ++lk+++ ++++++++++L++++v rkHle+++KD++ Rabbit4Lib 62 FVTGNKILRILKSKGLAPDLPEDLYHLIKKAVAVRKHLERNRKDKDA 108 kRGLiklvsKRrrLLaYLkkknvdrNaTykYeelIeqLGlr<-* k +Li+++s+++rL++Y+k+k+v++ +kYe++++++++ Rabbit4Lib 109 KFRLILIESRIHRLARYYKTKRVLP-PNWKYESSTASALVA 148 // Query: Rabbit4Lib.594.C2 253 1 302 nseq=2; minus strand; translated Scores for sequence family classification (score includes all domains): Model Description Score E-value N -------- ----------- ----- ------- --- Ribosomal_S15 Ribosomal protein S15 108.6 1.2e-28 1 Parsed for domains: Model Domain seq-f seq-t hmm-f hmm-t score E-value -------- ------- ----- ----- ----- ----- ----- ------- Ribosomal_S15 1/1 6 92 .. 1 88 [] 108.6 1.2e-28 Alignments of top-scoring domains: Ribosomal_S15: domain 1 of 1, from 6 to 92: score 108.6, E = 1.2e-28 *->makgliiseflkeekdtGSvEvQvalLTerivrLrkHleeHkKDysS ++g++i ++lk+++ ++++++++++L++++v rkHle+++KD++ Rabbit4Lib 6 FVTGNKILRILKSKGLAPDLPEDLYHLIKKAVAVRKHLERNRKDKDA 52 kRGLiklvsKRrrLLaYLkkknvdrNaTykYeelIeqLGlr<-* k +Li+++s+++rL++Y+k+k+v++ +kYe++++++++ Rabbit4Lib 53 KFRLILIESRIHRLARYYKTKRVLP-PNWKYESSTASALVA 92 // Query: Rabbit4Lib.595.C1 388 1 336 nseq=2; minus strand; translated Scores for sequence family classification (score includes all domains): Model Description Score E-value N -------- ----------- ----- ------- --- [no hits above thresholds] Parsed for domains: Model Domain seq-f seq-t hmm-f hmm-t score E-value -------- ------- ----- ----- ----- ----- ----- ------- [no hits above thresholds] Alignments of top-scoring domains: [no hits above thresholds] // Query: Rabbit4Lib.599.C1 172 387 644 nseq=2; minus strand; translated Scores for sequence family classification (score includes all domains): Model Description Score E-value N -------- ----------- ----- ------- --- Ribosomal_S28e Ribosomal protein S28e 148.2 1.4e-40 1 Parsed for domains: Model Domain seq-f seq-t hmm-f hmm-t score E-value -------- ------- ----- ----- ----- ----- ----- ------- Ribosomal_S28e 1/1 1 64 [. 1 71 [] 148.2 1.4e-40 Alignments of top-scoring domains: Ribosomal_S28e: domain 1 of 1, from 1 to 64: score 148.2, E = 1.4e-40 *->mDtkvykeiklAeVikVlGRTGsrGgvtQVRvkflddkdtgRvivRN t ++iklA+V+kVlGRTGs+G++tQVRv+f+dd t+R+i+RN Rabbit4Lib 1 --T---RPIKLARVTKVLGRTGSQGQCTQVRVEFMDD--TSRSIIRN 40 VKGPVreGDiltLlEsEREARrLr<-* VKGPVreGD+ltLlEsEREARrL Rabbit4Lib 41 VKGPVREGDVLTLLESEREARRLA 64 // Query: Rabbit4Lib.601.C1 313 1 252 nseq=2; minus strand; translated Scores for sequence family classification (score includes all domains): Model Description Score E-value N -------- ----------- ----- ------- --- Homeobox Homeobox domain -3.5 0.014 1 Parsed for domains: Model Domain seq-f seq-t hmm-f hmm-t score E-value -------- ------- ----- ----- ----- ----- ----- ------- Homeobox 1/1 20 66 .. 1 57 [] -3.5 0.014 Alignments of top-scoring domains: Homeobox: domain 1 of 1, from 20 to 66: score -3.5, E = 0.014 *->rrkRTtftpeQleeLEkeFqk.nrYPsreeReeLAkkLgLterqVkv +t +Q+e+LE F+k n++P++ + + ++ gL+e+ + Rabbit4Lib 20 ------PTEDQVEILEYNFNKvNKHPDPTTLCFIGAEAGLSEEETQK 60 WFQNRRaKwKk<-* WF K++ Rabbit4Lib 61 WF-----KQRL 66 // Query: Rabbit4Lib.603.C1 41 445 502 nseq=2; translated Scores for sequence family classification (score includes all domains): Model Description Score E-value N -------- ----------- ----- ------- --- [no hits above thresholds] Parsed for domains: Model Domain seq-f seq-t hmm-f hmm-t score E-value -------- ------- ----- ----- ----- ----- ----- ------- [no hits above thresholds] Alignments of top-scoring domains: [no hits above thresholds] // Query: Rabbit4Lib.606.C1 318 1 247 nseq=2; minus strand; translated Scores for sequence family classification (score includes all domains): Model Description Score E-value N -------- ----------- ----- ------- --- [no hits above thresholds] Parsed for domains: Model Domain seq-f seq-t hmm-f hmm-t score E-value -------- ------- ----- ----- ----- ----- ----- ------- [no hits above thresholds] Alignments of top-scoring domains: [no hits above thresholds] // Query: Rabbit4Lib.606.C2 427 1 342 nseq=2; minus strand; translated Scores for sequence family classification (score includes all domains): Model Description Score E-value N -------- ----------- ----- ------- --- [no hits above thresholds] Parsed for domains: Model Domain seq-f seq-t hmm-f hmm-t score E-value -------- ------- ----- ----- ----- ----- ----- ------- [no hits above thresholds] Alignments of top-scoring domains: [no hits above thresholds] // Query: Rabbit4Lib.608.C1 489 1 553 nseq=2; minus strand; translated Scores for sequence family classification (score includes all domains): Model Description Score E-value N -------- ----------- ----- ------- --- PUA PUA domain 78.0 2e-19 1 Parsed for domains: Model Domain seq-f seq-t hmm-f hmm-t score E-value -------- ------- ----- ----- ----- ----- ----- ------- PUA 1/1 95 172 .. 1 75 [] 78.0 2e-19 Alignments of top-scoring domains: PUA: domain 1 of 1, from 95 to 172: score 78.0, E = 2e-19 *->grvvvDdGAveAvlngGasLlapGVvevdgdf...rrGDeVvvvdek + +vD+GA+++vl+ Ga++++pG ++ ++ + + +V++++e+ Rabbit4Lib 95 PHQQVDKGAIKFVLS-GANIMCPGLTSPGAKLypaAVDTIVAIMAEG 140 .GelvAvGlAnysseEmrkikgGkaveirrvl<-* + ++++vG++++s+e+++k+++G+ +e++++l Rabbit4Lib 141 kQHALCVGVMKMSAEDIEKVNKGIGIENIHYL 172 // Query: Rabbit4Lib.610.C1 624 1 372 nseq=2; minus strand; translated Scores for sequence family classification (score includes all domains): Model Description Score E-value N -------- ----------- ----- ------- --- [no hits above thresholds] Parsed for domains: Model Domain seq-f seq-t hmm-f hmm-t score E-value -------- ------- ----- ----- ----- ----- ----- ------- [no hits above thresholds] Alignments of top-scoring domains: [no hits above thresholds] // Query: Rabbit4Lib.610.C2 917 1 650 nseq=2; minus strand; translated Scores for sequence family classification (score includes all domains): Model Description Score E-value N -------- ----------- ----- ------- --- [no hits above thresholds] Parsed for domains: Model Domain seq-f seq-t hmm-f hmm-t score E-value -------- ------- ----- ----- ----- ----- ----- ------- [no hits above thresholds] Alignments of top-scoring domains: [no hits above thresholds] // Query: Rabbit4Lib.612.C1 741 1 850 nseq=2; minus strand; translated Scores for sequence family classification (score includes all domains): Model Description Score E-value N -------- ----------- ----- ------- --- NUMOD4 NUMOD4 motif -5.3 4.7 1 B12-binding B12 binding domain -15.4 7.4 1 Cpn60_TCP1 TCP-1/cpn60 chaperonin family -43.1 2.8e-06 1 AAA_2 ATPase family associated with various cel -66.6 6.6 1 DUF924 Bacterial protein of unknown function (DU -142.2 5.3 1 Parsed for domains: Model Domain seq-f seq-t hmm-f hmm-t score E-value -------- ------- ----- ----- ----- ----- ----- ------- B12-binding 1/1 22 127 .. 1 142 [] -15.4 7.4 DUF924 1/1 88 184 .. 1 200 [] -142.2 5.3 NUMOD4 1/1 211 258 .. 1 62 [] -5.3 4.7 AAA_2 1/1 22 263 .. 1 197 [] -66.6 6.6 Cpn60_TCP1 1/1 1 284 [] 1 537 [] -43.1 2.8e-06 Alignments of top-scoring domains: B12-binding: domain 1 of 1, from 22 to 127: score -15.4, E = 7.4 *->grvvlakvggdgHdiGknvvaaaLrdaGiafevrVvdlGarplhldv gr v dg a++L++ G V d Rabbit4Lib 22 GREASLMVTNDG--------ATILKNIG------V----------DN 44 ppediveaakeekdpDkvvvgl.gSalsgahlelvkelaelLkeagknir p++ ++ + + + D vg ++++ + +el +e+ +l++++ i+ Rabbit4Lib 45 PAAKVLVDMSRV-QDD--EVGDgTTSVTVLAAELLREAETLIAKK---IH 88 pdvpvvvGGaavhptfdpeelLkeeggaDavvvGegeeavkelvea<-* p ++++G +t +++e L +D G +e+++++ + + Rabbit4Lib 89 P-QTIIAGW--REATKAAREAL-LSSAVD---HGSDEVKFRQDLMN 127 DUF924: domain 1 of 1, from 88 to 184: score -142.2, E = 5.3 *->eaedVLdFWfgkagDAdevvAlppdrWFaKndaFDadird.RFldlh +++++++ W+ +a+ A+++++ + a D + +F++ Rabbit4Lib 88 HPQTIIAGWR-EAT-----KAAREAL---LSSAVDHGSDEvKFRQDL 125 eaAargeldeWrqtpegaLALiiLLDQfPRNmFRGTPrAfATDpLAlrvA + a l t + ++ Rabbit4Lib 126 MNIAGTTLSSKLLTHHKD-----------------------------HFT 146 reAiaaGfDqqlppelHRlFfYLPFeHSEnLadQdrSVaLftaLrddeGD + A++a ++++ l +++ + +L G Rabbit4Lib 147 KLAVEAVLRLKGSGNL-------------------EAIHIIKKL----GG 173 eVGGVRkifddsldyAlrHrDIIaRFGRFPHRNaILGResTpEEqeFLde sl+ +Lde Rabbit4Lib 174 -----------SLA------------------------------DSYLDE 182 HgGF<-* GF Rabbit4Lib 183 --GF 184 NUMOD4: domain 1 of 1, from 211 to 258: score -5.3, E = 4.7 *->EvWKdIkGyEGhYqVSnlGrVrsiknvrtsnvdqknrelkgKiLKLs ++ +Ik++ ++++V+++ +V +i+ + k +e +iLK Rabbit4Lib 211 DT-DKIKIFGSRVRVDSTAKVAEIE----HAEKEKMKEKVERILK-- 250 rldknGYlrinLckn<-* + in + n Rabbit4Lib 251 -------HGINCFIN 258 AAA_2: domain 1 of 1, from 22 to 263: score -66.6, E = 6.6 *->rpigsflflGPTGVGKTefdim.ppG.LakaLAelLfv......gde ++s ++ T + + ++ ak L ++ v++++ +++ Rabbit4Lib 22 GREASLMVTNDG---ATILKNIgVDNpAAKVLVDMSRVqddevgDGT 65 kaliriDMsEymEAGYVgEevkhsVsrLiGappGYVgyEegGqLTEaVRR ++++ + + E ++ ++++ i+ + + g e Rabbit4Lib 66 TSVTVLAAELLRE-------AETLIAKKIHPQTIIAGWREAT-------- 100 kPYSVVLlDEIEKAhpkgsigrDVSrEdVqniLLQvlDgGrLtVPpqGGR KA++ +LL + + Rabbit4Lib 101 ------------KAAR--------------EALL----SSAVD------- 113 KHdsqGrtVdFrNtliImTsNfgsekisda.r.................. + +V+Fr l ++ s+k++ +++++ ++ + + ++++ Rabbit4Lib 114 --HGSD-EVKFRQDLMNIAGTTLSSKLLTHhKdhftklaveavlrlkgsg 160 .................................................. + + + ++ +++ ++ +++ +++ + +++++ ++ + +++ Rabbit4Lib 161 nleaihiikklggsladsyldegflldkkigvnqpkrienakiliantgm 210 ..........................dye.lkelvmdelkkgFiPEFlnR ++++ + +++ + +++ + + ++ ++e++ke+v+ lk+g i F+nR Rabbit4Lib 211 dtdkikifgsrvrvdstakvaeiehaEKEkMKEKVERILKHG-INCFINR 259 ldei<-* + Rabbit4Lib 260 QLIY 263 Cpn60_TCP1: domain 1 of 1, from 1 to 284: score -43.1, E = 2.8e-06 *->ladivkttLGPkGrnKmlvngs..yGditiTnDGaTIlkeielqhPy + vk+tLGPkG++K+l++ s++ +++ +TnDGaTIlk+i +++P Rabbit4Lib 1 XTRPVKSTLGPKGMDKILLS-SgrEASLMVTNDGATILKNIGVDNP- 45 enlgAkllveaskkQddevGDGTTtvvvLAgeLLkeaekLinaGlhPtqI +Ak+lv++s+ QddevGDGTT+v+vLA+eLL+eae Li++++hP+ I Rabbit4Lib 46 ---AAKVLVDMSRVQDDEVGDGTTSVTVLAAELLREAETLIAKKIHPQTI 92 irGyelAaekaleaLkklsipvetndk.inkeellkvAktslnsKvisgn i+G ++A ++a eaL + +++ ++ + + +l+++A t+l+sK+ + Rabbit4Lib 93 IAGWREATKAAREALLSSAVDHGSD-EvKFRQDLMNIAGTTLSSKLLTHH 141 siadAlakvgvdavitveeekndkysfdldnievvkglGgsifdsglisG +++ ++k++v+av++++ + +l+ i+++k+lGgs+ ds+l +G Rabbit4Lib 142 KDH--FTKLAVEAVLRLK-GS-----GNLEAIHIIKKLGGSLADSYLDEG 183 yvitkeerhpvelempkrlendaKIavlncpLeiLelktetkrplviias + ++k+ ++pkr+en aKI+++n ++ +k ++ + v++ s Rabbit4Lib 184 FLLDKKIGV----NQPKRIEN-AKILIANTGMD--TDKIKIFGSRVRVDS 226 dedleaLstlEenklkgkvkviavkkRvcdgpnvvitqkegidDiAlhtl +++ ++ +E++k+k+kv+ i ++ g+n i+++ i + + + Rabbit4Lib 227 TAKVAEIEHAEKEKMKEKVERILKH-----GINCFINRQ-LIYNYPEQLF 270 adtvisdkagImalrrvskedlgrlakvlgakvvttligpgagsedeeei ag+ma++++ + Rabbit4Lib 271 G------AAGVMAIEHA-----------------------D--------- 282 GerdevleqeigestsddkvtkleerkarLsgkvatIllRGateveldEl Rabbit4Lib - -------------------------------------------------- - errieDAlnavkaaiedgriVPGGGaaEielakaLdkykakslegkeqla + Rabbit4Lib 283 -------------------------------------F----A------- 284 veafakALeviPkiLAeNAGldgidviskLraehakGnsdlknyGydaat Rabbit4Lib - -------------------------------------------------- - gkivdmveaGIiDplkVkrqalklAteaAsliLtiDdiImakp<-* Rabbit4Lib - ------------------------------------------- - // Query: Rabbit4Lib.612.C2 865 1 941 nseq=5; minus strand; translated Scores for sequence family classification (score includes all domains): Model Description Score E-value N -------- ----------- ----- ------- --- Cpn60_TCP1 TCP-1/cpn60 chaperonin family 29.7 1.8e-08 1 NUMOD4 NUMOD4 motif -5.3 4.7 1 Topoisom_I Eukaryotic DNA topoisomerase I, catalytic -128.3 7.4 1 Parsed for domains: Model Domain seq-f seq-t hmm-f hmm-t score E-value -------- ------- ----- ----- ----- ----- ----- ------- NUMOD4 1/1 23 70 .. 1 62 [] -5.3 4.7 Topoisom_I 1/1 31 242 .. 1 273 [] -128.3 7.4 Cpn60_TCP1 1/1 1 303 [. 1 537 [] 29.7 1.8e-08 Alignments of top-scoring domains: NUMOD4: domain 1 of 1, from 23 to 70: score -5.3, E = 4.7 *->EvWKdIkGyEGhYqVSnlGrVrsiknvrtsnvdqknrelkgKiLKLs ++ +Ik++ ++++V+++ +V +i+ + k +e +iLK Rabbit4Lib 23 DT-DKIKIFGSRVRVDSTAKVAEIE----HAEKEKMKEKVERILK-- 62 rldknGYlrinLckn<-* + in + n Rabbit4Lib 63 -------HGINCFIN 70 Topoisom_I: domain 1 of 1, from 31 to 242: score -128.3, E = 7.4 *->dSklKgQsdygKyEkaRRnakRdkiFvkLkdvId.kIRkfYtkdldi +S+++ s + E + a++ k k++++ +++I++f+++ l i Rabbit4Lib 31 GSRVRVDSTAKVAEIEH--AEKEKMKEKVERILKhGINCFINRQL-I 74 FkKsk..........dmkkrQrAvAlYlIDkFALRaGneKyedEADTVGc ++ ++ + + +++ +v ++AL +G+e A T Rabbit4Lib 75 YNYPEqlfgaagvmaIEHADFAGV-----ERLALVTGGEI----AST--- 112 CtLrveHvtlepdkelgkpnkvkfdFlGKDSIryyneVevekHrVfknLk H +l + lg ++ G D+ + V+ + + Rabbit4Lib 113 ----FDHPELVK---LGSCKLIEEVMIGEDKLIHFSGVALGE-----ACT 150 rFkidpPKkpgddLFDrLddIlFtskLNkhLkqfMpGLtaKVFRT.YNAS + + ++ ++ D + L + L + t+K+ RT Y+ Rabbit4Lib 151 IVL-RG---ATQQILDEAE-----RSLHDALCVL--AQTVKDSRTvYGGG 189 iTlqeqLWtnVkkltdgdvaekiiplpsiKklynrAnrqVAIlcNHqrsv +e+L + ++A+ q A+ r+ Rabbit4Lib 190 C--SEML---M----------------------AHAVTQLAN-----RTP 207 SKshYeaqmvklnekidalkyqlirlkkaldefkkkiv<-* K + + m+ + l ++i+ +d+++ Rabbit4Lib 208 GKEA--VAMESYAKALRMLP-TIIADNAGYDSADLVAQ 242 Cpn60_TCP1: domain 1 of 1, from 1 to 303: score 29.7, E = 1.8e-08 *->ladivkttLGPkGrnKmlvngsyGditiTnDGaTIlkeielqhPyen P Rabbit4Lib 1 ---------------------X---------------------P--- 2 lgAkllveaskkQddevGDGTTtvvvLAgeLLkeaekLinaGlhPtqIir Rabbit4Lib - -------------------------------------------------- - GyelAaekaleaLkklsipvetndkinkeellkvAktslnsKvisgnsia t+ Rabbit4Lib 3 ---------------------TR--------------------------- 4 dAlakvgvdavitveeekndkysfdldnievvkglGgsifdsglisGyvi Rabbit4Lib - -------------------------------------------------- - tkeerhpvelempkrlendaKIavlncpLeiLelktetkrplviiasded p +pkr+en aKI+++n ++ +k ++ + v++ s+++ Rabbit4Lib 5 ------P----QPKRIEN-AKILIANTGMD--TDKIKIFGSRVRVDSTAK 41 leaLstlEenklkgkvkviavkkRvcdgpnvvitqkegidDiAlhtladt ++ +E++k+k+kv+ i ++ g+n i+++ i + + + Rabbit4Lib 42 VAEIEHAEKEKMKEKVERILKH-----GINCFINRQ-LIYNYPEQLFG-- 83 visdkagImalrrvskedlgrlakvlgakvvttligpgagsedeeeiGer ag+ma++++ +rla+v+g+ + +t+++p+ ++G++ Rabbit4Lib 84 ----AAGVMAIEHADFAGVERLALVTGGEIASTFDHPE-----LVKLGSC 124 devleqeigestsddkvtkleerkarLsgkvatIllRGateveldElerr + ++e++ige dk+ + ++ g ++tI+lRGat+++ldE+er+ Rabbit4Lib 125 KLIEEVMIGE----DKLIHFSGVAL---GEACTIVLRGATQQILDEAERS 167 ieDAlnavkaaiedgriVPGGGaaEielakaLdkykakslegkeqlavea ++DAl++ ++++d r V GGG+ E+ +a+a+++ a++++gke +a+e+ Rabbit4Lib 168 LHDALCVLAQTVKDSRTVYGGGCSEMLMAHAVTQL-ANRTPGKEAVAMES 216 fakALeviPkiLAeNAGldgidviskLraehakGnsdlknyGydaatgki +akAL+ +P i+A+NAG+d+ d++++Lra+h +Gn G+d +g+i Rabbit4Lib 217 YAKALRMLPTIIADNAGYDSADLVAQLRAAHSEGN---VTAGLDMKEGTI 263 vdmveaGIiDplkVkrqalklAteaAsliLtiDdiImakp<-* dm+ +GI ++ +Vkrq+l +A+eaA iL++D iI+a p Rabbit4Lib 264 GDMAVLGITESFQVKRQVLLSAAEAAEVILRVDNIIKAAP 303 // Query: Rabbit4Lib.616.C1 510 141 721 nseq=3; minus strand; translated Scores for sequence family classification (score includes all domains): Model Description Score E-value N -------- ----------- ----- ------- --- PABP Poly-adenylate binding protein, unique domai 169.1 7.6e-47 1 Parsed for domains: Model Domain seq-f seq-t hmm-f hmm-t score E-value -------- ------- ----- ----- ----- ----- ----- ------- PABP 1/1 81 152 .. 1 82 [] 169.1 7.6e-47 Alignments of top-scoring domains: PABP: domain 1 of 1, from 81 to 152: score 169.1, E = 7.6e-47 *->epltAsdlaDnatpekLnDhLsvqkQmLGErLYPkVeaktseeelAg epltAs+la +a+p++ qkQmLGErL+P+++a+ +++lAg Rabbit4Lib 81 EPLTASMLA-SAPPQE-------QKQMLGERLFPLIQAM--HPTLAG 117 KITGMLLEipnsElLhLLESdEaLkaKVnEAiaVL<-* KITGMLLEi+nsElLh+LES+E+L++KV+EA+aVL Rabbit4Lib 118 KITGMLLEIDNSELLHMLESPESLRSKVDEAVAVL 152 // Query: Rabbit4Lib.616.C2 621 1 962 nseq=3; minus strand; translated Scores for sequence family classification (score includes all domains): Model Description Score E-value N -------- ----------- ----- ------- --- PABP Poly-adenylate binding protein, unique domai 169.1 7.6e-47 1 Parsed for domains: Model Domain seq-f seq-t hmm-f hmm-t score E-value -------- ------- ----- ----- ----- ----- ----- ------- PABP 1/1 208 279 .. 1 82 [] 169.1 7.6e-47 Alignments of top-scoring domains: PABP: domain 1 of 1, from 208 to 279: score 169.1, E = 7.6e-47 *->epltAsdlaDnatpekLnDhLsvqkQmLGErLYPkVeaktseeelAg epltAs+la +a+p++ qkQmLGErL+P+++a+ +++lAg Rabbit4Lib 208 EPLTASMLA-SAPPQE-------QKQMLGERLFPLIQAM--HPTLAG 244 KITGMLLEipnsElLhLLESdEaLkaKVnEAiaVL<-* KITGMLLEi+nsElLh+LES+E+L++KV+EA+aVL Rabbit4Lib 245 KITGMLLEIDNSELLHMLESPESLRSKVDEAVAVL 279 // Query: Rabbit4Lib.617.C1 397 1 370 nseq=2; minus strand; translated Scores for sequence family classification (score includes all domains): Model Description Score E-value N -------- ----------- ----- ------- --- [no hits above thresholds] Parsed for domains: Model Domain seq-f seq-t hmm-f hmm-t score E-value -------- ------- ----- ----- ----- ----- ----- ------- [no hits above thresholds] Alignments of top-scoring domains: [no hits above thresholds] // Query: Rabbit4Lib.619.C1 295 1 202 nseq=2; minus strand; translated Scores for sequence family classification (score includes all domains): Model Description Score E-value N -------- ----------- ----- ------- --- LSM LSM domain -4.1 1.7 1 Parsed for domains: Model Domain seq-f seq-t hmm-f hmm-t score E-value -------- ------- ----- ----- ----- ----- ----- ------- LSM 1/1 4 57 .. 1 71 [] -4.1 1.7 Alignments of top-scoring domains: LSM: domain 1 of 1, from 4 to 57: score -4.1, E = 1.7 *->kfLkklFLNlRlgkrVtVeLknGrelrGtLkgfDqfmNlvLddveEt L+++ N+vL++v+E+ Rabbit4Lib 4 XTLRDC-------------------------------NMVLENVKEM 19 i.dgkkn.............rklglvliRGnnIvlisp<-* +++ k +++++++++ +++r ++++++RG++++ + Rabbit4Lib 20 WtEVPKSgkgkkkskpvnkdRYISKMFLRGDSVIVVLR 57 // Query: Rabbit4Lib.619.C2 1141 1 419 nseq=3; minus strand; translated Scores for sequence family classification (score includes all domains): Model Description Score E-value N -------- ----------- ----- ------- --- LSM LSM domain 65.1 1.5e-15 1 Parsed for domains: Model Domain seq-f seq-t hmm-f hmm-t score E-value -------- ------- ----- ----- ----- ----- ----- ------- LSM 1/1 51 132 .. 1 71 [] 65.1 1.5e-15 Alignments of top-scoring domains: LSM: domain 1 of 1, from 51 to 132: score 65.1, E = 1.5e-15 *->kfLkklFLNlRlgkrVtVeLknGrelrGtLkgfDqfmNlvLddveEt ++L ++ ++++++V++ ++n+++l G++k+fD ++N+vL++v+E+ Rabbit4Lib 51 SVLTQS---VKNNTQVLINCRNNKKLLGRVKAFDRHCNMVLENVKEM 94 i.dgkkn.............rklglvliRGnnIvlisp<-* +++ k +++++++++ +++r ++++++RG++++ + Rabbit4Lib 95 WtEVPKSgkgkkkskpvnkdRYISKMFLRGDSVIVVLR 132 // Query: Rabbit4Lib.621.C1 1009 1 1284 nseq=2; minus strand; translated Scores for sequence family classification (score includes all domains): Model Description Score E-value N -------- ----------- ----- ------- --- PspA_IM30 PspA/IM30 family -84.7 7.7 1 E-MAP-115 E-MAP-115 family -101.7 5.8 1 Parsed for domains: Model Domain seq-f seq-t hmm-f hmm-t score E-value -------- ------- ----- ----- ----- ----- ----- ------- E-MAP-115 1/1 157 321 .. 1 193 [] -101.7 5.8 PspA_IM30 1/1 146 376 .. 1 241 [] -84.7 7.7 Alignments of top-scoring domains: E-MAP-115: domain 1 of 1, from 157 to 321: score -101.7, E = 5.8 *->APgkaensaAlsKptAGTT.DaeEAt...rLLA......EKRRqARe +++ +a + p T +Dae A+++ r+LA+++++ EK + Rabbit4Lib 157 ---STVHPASP--PLLCTReDAEVAAsplRILAetpdsfEKHIRSIL 198 QrEkEEqERreqeErdrr.kREElkrraaEeRtlrrEeEARrr....Eee Qr E+d + EE ++ + rE +++ +Ee Rabbit4Lib 199 QRSAANPAFLKSSEKDTApPPEECLQLISRATQVFREQYILKQdlakEEI 248 raRekeekKKqEGEEKRKAGEElkRkAEEeLLLKekrEqEeqErAmiqkQ + R k + K+K E+l EE+ k +E +Er +++k Rabbit4Lib 249 QRRVKLLC-----DQKKKQLEDLSYCREER-----KSLREMAER-LADKY 287 KEeAEaraREeAErvRlEREkhfqqeEQERlERkKRLeEIMKRTRksevs E+ E++ E ++ + MKR s s Rabbit4Lib 288 EEA--------KEKQ----EDIMNR---------------MKRVLHSFHS 310 ekVKkeDskeG<-* +Ds Rabbit4Lib 311 QLPVLSDSERD 321 PspA_IM30: domain 1 of 1, from 146 to 376: score -84.7, E = 7.7 *->giFkRllrllrAniheg........ldkaEDPeAlkiLeQairdmes + l r l + +h ++++ +++d+ +++ l+iL + e+ Rabbit4Lib 146 SAYECLIRPLLSTVHPAsppllctrEDAEVAASPLRILAETPDSFEK 192 elakarqalAqviArqkqlerkleeqkeqakklekkAkaALtkGdeakia ++ q +A A k++e++ + e+ l ++A++ ++ + Rabbit4Lib 193 HIRSILQRSAANPAFLKSSEKDTAPPPEECLQLISRATQVFREQ------ 236 aeEeEeLArEaLaekktlekqaeale.tqlaqqrsaveqLrkqlaaLEtK ++LA+E ++++++l + + ++ + l+ r+ + Lr+ ++L+ K Rabbit4Lib 237 YILKQDLAKEEIQRRVKLLCDQKKKQlEDLSYCREERKSLREMAERLADK 286 iqelkakkelLkaRlkaAkAqeavqkslgklss...ltesAtdsfeRiee ++e+k k+e R ++++l+++ s+ ++ +++++ + + Rabbit4Lib 287 YEEAKEKQEDIMNR---------MKRVLHSFHSqlpVLSDSERDMKKELQ 327 Ki.eerEaradaaaelagssaqaGaDldakleaagiqkeveSsaedvLar +i+e + a+a ++ ++ ++ + + + + ++ + +L++ Rabbit4Lib 328 RIpEQLRHLASAIKQVT--MKKD----YQQRKMERVLSAQKP--SITLSA 369 Lkaeqgk<-* +++ + Rabbit4Lib 370 YQRRCIQ 376 // Query: Rabbit4Lib.624.C1 230 1 417 nseq=2; minus strand; translated Scores for sequence family classification (score includes all domains): Model Description Score E-value N -------- ----------- ----- ------- --- CBAH Linear amide C-N hydrolases, choloylglycine -143.8 2.5 1 Parsed for domains: Model Domain seq-f seq-t hmm-f hmm-t score E-value -------- ------- ----- ----- ----- ----- ----- ------- CBAH 1/1 1 89 [. 1 366 [] -143.8 2.5 Alignments of top-scoring domains: CBAH: domain 1 of 1, from 1 to 89: score -143.8, E = 2.5 *->CTsltledkkgkllfGRNMDfgvFLGWnislgeeVIitPrnyklvfL Rabbit4Lib 1 ---------------------------------------------X- 1 eklgkllvtkyNPaQwtsKygsvvTAvvGYMGtlvdsyPlFaDglNEkGL + + vG Rabbit4Lib 2 ------HASAD---------------XVG--------------------- 9 giAGLYfGipgyaeyskepkedkvnIqpgelirwVLeNftSVeEVKekLt Rabbit4Lib - -------------------------------------------------- - klniVnealdilggkaPLHWiisDaSGesiVItRDRkEsvkeYgLkVydn V+ ++Y Rabbit4Lib 10 ------------------------------VV--------ETY------- 14 pevGVlTNsPtfGdRWwHlvqtNLdqYtGlrpnqpqelfmgdldLtafGq + dRW+ + +Ld+++ Rabbit4Lib 15 -----------Y-DRWKNP--LFLDDRR---------------------- 28 GtGglGLPGDftPasRFVRAAYlKknlekaktEsesvatfFhILsnvaip tPa K++l+++++E++s+a+++++Ls+++ Rabbit4Lib 29 -----------TPA---------KMCLNRTTQENISFAALYDVLSTKP-- 56 KGaVlneeGkleyTvYTscmdltkgqYYFetYDNsqInaVnLdhenLAPG Vln ++Tv+T++md+t g+ +etY L Rabbit4Lib 57 ---VLN-----KLTVFTTLMDVTRGR--YETY--------------L--- 79 APVLSLDPDNrDctdlv.ty<-* rDc+d+++++ Rabbit4Lib 80 ----------RDCPDPCkVG 89 // Query: Rabbit4Lib.625.C1 717 121 761 nseq=2; minus strand; translated Scores for sequence family classification (score includes all domains): Model Description Score E-value N -------- ----------- ----- ------- --- Ank Ankyrin repeat 45.2 1.4e-09 1 Parsed for domains: Model Domain seq-f seq-t hmm-f hmm-t score E-value -------- ------- ----- ----- ----- ----- ----- ------- Ank 1/1 39 71 .. 1 33 [] 45.3 1.4e-09 Alignments of top-scoring domains: Ank: domain 1 of 1, from 39 to 71: score 45.3, E = 1.4e-09 *->dGfTPLHlAalrgnlevvklLlsqGAdlnaqdd<-* +G+TPL +A++rg++++v++Ll++ A++n+++ Rabbit4Lib 39 NGDTPLICACRRGHTRIVSFLLKRNANVNLRNQ 71 // Query: Rabbit4Lib.626.C1 1445 1 613 nseq=2; minus strand; translated Scores for sequence family classification (score includes all domains): Model Description Score E-value N -------- ----------- ----- ------- --- UBX UBX domain 24.0 0.0034 1 Parsed for domains: Model Domain seq-f seq-t hmm-f hmm-t score E-value -------- ------- ----- ----- ----- ----- ----- ------- UBX 1/1 91 170 .. 1 90 [] 24.0 0.0034 Alignments of top-scoring domains: UBX: domain 1 of 1, from 91 to 170: score 24.0, E = 0.0034 *->ekaedvcrlqiRlPDGsRlvrrFnssdtlqdvydfvdshrygadepe ++ + l++RlPDG l+ +F + + l+++y fv ++ + p Rabbit4Lib 91 LRKYTFTLLRVRLPDGCLLQGTFYARERLSALYSFVREALESDWLP- 136 dYkheFeFsLltpfPrrlltkldesktLkeagllpnstlvlep<-* F+Ll + +l +++ L+e gl p++ + + + Rabbit4Lib 137 -------FELLASGGQKLSEEEN--LALNECGLVPSALVTFSW 170 // Query: Rabbit4Lib.626.C2 3143 1 1339 nseq=5; minus strand; translated Scores for sequence family classification (score includes all domains): Model Description Score E-value N -------- ----------- ----- ------- --- UBX UBX domain 24.0 0.0034 1 Phage_B Scaffold protein B -46.1 2.4 1 tRNA-synt_2 tRNA synthetases class II (D, K and N) -224.3 7.6 1 Parsed for domains: Model Domain seq-f seq-t hmm-f hmm-t score E-value -------- ------- ----- ----- ----- ----- ----- ------- Phage_B 1/1 65 184 .. 1 117 [] -46.1 2.4 UBX 1/1 333 412 .. 1 90 [] 24.0 0.0034 tRNA-synt_2 1/1 191 428 .. 1 384 [] -224.3 7.6 Alignments of top-scoring domains: Phage_B: domain 1 of 1, from 65 to 184: score -46.1, E = 2.4 *->ltenq...ngnlSqEriqnanqpqlrneavvNGspvqgsasG...te l + q++ g++Sq +i n+ +lr ea v Gsp+ + a +++ Rabbit4Lib 65 LEQKQpraRGPTSQDSIRNQVRKELRAEATVSGSPEAQGATAvpeAK 111 sngLRrdsvq.....sdlEaERqkrtdiEag.kaacaRrFGGAtcddksa g +vq+ + l r++ Eag kaa +F + Rabbit4Lib 112 EEGSAHMAVQgvyftCPLTGATLSRDQREAGvKAAILSHFSTDPVGASIM 161 eiYasFDendtrVQpAEFYRFnDgelnkyGYF<-* +i+ F + rV R + k Y Rabbit4Lib 162 KIHT-FNKDRDRV------RLGVDTIAK--YL 184 UBX: domain 1 of 1, from 333 to 412: score 24.0, E = 0.0034 *->ekaedvcrlqiRlPDGsRlvrrFnssdtlqdvydfvdshrygadepe ++ + l++RlPDG l+ +F + + l+++y fv ++ + p Rabbit4Lib 333 LRKYTFTLLRVRLPDGCLLQGTFYARERLSALYSFVREALESDWLP- 378 dYkheFeFsLltpfPrrlltkldesktLkeagllpnstlvlep<-* F+Ll + +l +++ L+e gl p++ + + + Rabbit4Lib 379 -------FELLASGGQKLSEEEN--LALNECGLVPSALVTFSW 412 tRNA-synt_2: domain 1 of 1, from 191 to 428: score -224.3, E = 7.6 RF xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx *->seetRLkyRyLDLRrpkmqrnlklRskiikaiRefLderGFlEVETP +ee +++ L+ + +++ R + +ef++ GF P Rabbit4Lib 191 PEEEKYRKIKLQNK------VFQERINCLEGAHEFFEAIGFQKTLLP 231 RF xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx xxxxxxxxxx iLtkstpEGgARdFlVpSRlhpGgskklskfyakeayL..pQSPQLyKQl + + pE F V + +a L +pQS +K++ Rabbit4Lib 232 VPDQESPEE----FYVL------------SEAA----LaqPQSLDRHKER 261 RF xxxxxxxxxxxxxxxxxxxxxxxx xxxxxxxxxxxxxxxxxxxxxxxx LmvaGfdRyFqIarcFRdEdlRad..RHppEFTqlDlEmsFvdyedvmdl L++a E Ra +R+ Rabbit4Lib 262 LLAA--------------EPVRATleRQR--------------------- 276 RF xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx tEdlikyvfkevlgtktlkekhrelekllgielptPdFpRitYaeAmery +vf+ ++++ +elp+ F +t ae ++r Rabbit4Lib 277 ------RVFR-------------PSPLASKFELPAD-FFNLT-AEEVKRE 305 RF xxxxxxxxxxxxxxxxxxxxxxxxxxxxxx gsDkpPDlRfdgldeLkdvteifkgseFkv.................... lR + v+ ++ ++ ++++ + Rabbit4Lib 306 QR-----LRA-DA----------------Verlsalrtkamrekeeqrel 333 RF xxxxxxx xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx .....gaLRlkl..geeLgLieyfkdenlfnplwVvDfPlfEwdEEekry + LR++l++g L+ + f + E + Rabbit4Lib 334 rkytfTLLRVRLpdGCLLQGT-------------------F-YARERLS- 362 RF xxxxxxxxx xxx xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx vaaHHPFtm.pkd....edldlLekdPekalaeayDLvlnGiyEiggGSi ++++ ++ ++++l+ ++L+ G + Rabbit4Lib 363 -----ALYSfVREalesDWLP-------------FELLASG-G------- 386 RF xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx RIhdpelQrkrFeelGldradeeaeekFgflLdAlkYGaPPHGGiAlGlD +k ee++l +e G+ P + Rabbit4Lib 387 --------QKLSEEENLA--LNE-------------CGLVPSA------- 406 RF xxxxxxxxxxxxxxxxxxxxxxx RLvMlLtGlesIRdVIaFPktqk<-* Lv + + d a + Rabbit4Lib 407 -LVTFSWDPAVLEDLRAAGAEPH 428 // Query: Rabbit4Lib.628.C1 683 1 634 nseq=2; minus strand; translated Scores for sequence family classification (score includes all domains): Model Description Score E-value N -------- ----------- ----- ------- --- BCNT Bucentaur or craniofacial development 134.7 1.6e-36 1 Parsed for domains: Model Domain seq-f seq-t hmm-f hmm-t score E-value -------- ------- ----- ----- ----- ----- ----- ------- BCNT 1/1 129 202 .. 1 87 [] 134.7 1.6e-36 Alignments of top-scoring domains: BCNT: domain 1 of 1, from 129 to 202: score 134.7, E = 1.6e-36 *->krspllessiagklkaREAteNKKkKLstLEKSklDWksykeeHeGl + p g +a KK+K+stLEKSklDW+s+kee eG+ Rabbit4Lib 129 HEQPF------GENGA------KKQKMSTLEKSKLDWESFKEE-EGI 162 kDELelhnkgKDGYleRqdFLeRadaRqfEkeRelRlaqr<-* ++EL++hn+gK+GY+eR++FL+R+d+RqfE+eR+lRl+++ Rabbit4Lib 163 GEELAIHNRGKEGYIERKAFLDRVDHRQFEIERDLRLSKM 202 // Query: Rabbit4Lib.629.C1 114 1 75 nseq=2; minus strand; translated Scores for sequence family classification (score includes all domains): Model Description Score E-value N -------- ----------- ----- ------- --- [no hits above thresholds] Parsed for domains: Model Domain seq-f seq-t hmm-f hmm-t score E-value -------- ------- ----- ----- ----- ----- ----- ------- [no hits above thresholds] Alignments of top-scoring domains: [no hits above thresholds] // Query: Rabbit4Lib.631.C1 636 1 534 nseq=2; minus strand; translated Scores for sequence family classification (score includes all domains): Model Description Score E-value N -------- ----------- ----- ------- --- [no hits above thresholds] Parsed for domains: Model Domain seq-f seq-t hmm-f hmm-t score E-value -------- ------- ----- ----- ----- ----- ----- ------- [no hits above thresholds] Alignments of top-scoring domains: [no hits above thresholds] // Query: Rabbit4Lib.632.C1 155 1 264 nseq=3; minus strand; translated Scores for sequence family classification (score includes all domains): Model Description Score E-value N -------- ----------- ----- ------- --- DUF1242 Protein of unknown function (DUF1242) -6.3 0.11 1 Parsed for domains: Model Domain seq-f seq-t hmm-f hmm-t score E-value -------- ------- ----- ----- ----- ----- ----- ------- DUF1242 1/1 1 28 [. 1 76 [] -6.3 0.11 Alignments of top-scoring domains: DUF1242: domain 1 of 1, from 1 to 28: score -6.3, E = 0.11 *->SAlFnFqsLLvviLLlICTCaYikskfPsLldRGqLlsnkkGllGvF P++ R Rabbit4Lib 1 ---------------------------PRV--R-------------- 4 WKaArIGeRlSpyValaCivMAfsvLFis<-* IGeR+SpyVa++C+vMAfs+LF++ Rabbit4Lib 5 -----IGERKSPYVAVCCVVMAFSILFMQ 28 // Query: Rabbit4Lib.632.C2 202 320 437 nseq=2; translated Scores for sequence family classification (score includes all domains): Model Description Score E-value N -------- ----------- ----- ------- --- [no hits above thresholds] Parsed for domains: Model Domain seq-f seq-t hmm-f hmm-t score E-value -------- ------- ----- ----- ----- ----- ----- ------- [no hits above thresholds] Alignments of top-scoring domains: [no hits above thresholds] // Query: Rabbit4Lib.632.C3 133 1 125 nseq=2; minus strand; translated Scores for sequence family classification (score includes all domains): Model Description Score E-value N -------- ----------- ----- ------- --- [no hits above thresholds] Parsed for domains: Model Domain seq-f seq-t hmm-f hmm-t score E-value -------- ------- ----- ----- ----- ----- ----- ------- [no hits above thresholds] Alignments of top-scoring domains: [no hits above thresholds] // Query: Rabbit4Lib.633.C1 556 78 369 nseq=10; minus strand; translated Scores for sequence family classification (score includes all domains): Model Description Score E-value N -------- ----------- ----- ------- --- TSC22 TSC-22/dip/bun family 143.6 3.5e-39 1 NPV_P10 Nucleopolyhedrovirus P10 protein -7.7 3.6 1 Parsed for domains: Model Domain seq-f seq-t hmm-f hmm-t score E-value -------- ------- ----- ----- ----- ----- ----- ------- TSC22 1/1 9 68 .. 1 60 [] 143.6 3.5e-39 NPV_P10 1/1 17 81 .. 1 89 [] -7.7 3.6 Alignments of top-scoring domains: TSC22: domain 1 of 1, from 9 to 68: score 143.6, E = 3.5e-39 *->MDLVKsHLmyAVREEVEvLkeqIkeLveklnqLeeENtLLktnvSpE MDLVK+HLmyAVREEVE+LkeqI+eLvek++qLe+ENtLLkt++SpE Rabbit4Lib 9 MDLVKNHLMYAVREEVEILKEQIRELVEKNSQLERENTLLKTLASPE 55 qLaqlqaqlqlae<-* qL+++q+ l++ e Rabbit4Lib 56 QLEKFQSRLSPDE 68 NPV_P10: domain 1 of 1, from 17 to 81: score -7.7, E = 3.6 *->MSKQNILlqIrdDIkavddKVdaLQqqVddlranlpDvteLndkLDa M r+ + +++++ +L +++n++ L++ Rabbit4Lib 17 MY------AVREEVEILKEQIREL------VEKNSQ--------LER 43 qtAqLtdlqt..kVdeIqdiLngdevePEPeaeapeppvPeiPd<-* ++ L +l ++++++ q+ L+ de+ ++ p+ Pe Pd Rabbit4Lib 44 ENTLLKTLASpeQLEKFQSRLSPDEP------APESPEAPEAPD 81 // Query: Rabbit4Lib.634.C1 298 1 355 nseq=2; minus strand; translated Scores for sequence family classification (score includes all domains): Model Description Score E-value N -------- ----------- ----- ------- --- RRM_1 RNA recognition motif. (a.k.a. RRM, RBD, or 56.7 4.9e-13 1 Parsed for domains: Model Domain seq-f seq-t hmm-f hmm-t score E-value -------- ------- ----- ----- ----- ----- ----- ------- RRM_1 1/1 46 113 .. 1 74 [] 56.7 4.9e-13 Alignments of top-scoring domains: RRM_1: domain 1 of 1, from 46 to 113: score 56.7, E = 4.9e-13 *->lfVgNLppdtteedLkdlFskfGpiesikivrDttretgrskGfaFV lf NLp++t+e L lF++f++++++++v+ aFV Rabbit4Lib 46 LFLNNLPEETNEMMLSMLFNQFPGFKEVRLVPG-------RHDIAFV 85 eFedeedAekAldalnG.kelggrelrv<-* eFe+ +A +A dal+G k+ ++ +++ Rabbit4Lib 86 EFENDGQAGAARDALQGfKITPSHAMKI 113 // Query: Rabbit4Lib.637.C1 475 1 723 nseq=3; minus strand; translated Scores for sequence family classification (score includes all domains): Model Description Score E-value N -------- ----------- ----- ------- --- Pyr_redox_dim Pyridine nucleotide-disulphide oxidored 137.1 3.2e-37 1 Pyr_redox_2 Pyridine nucleotide-disulphide oxidored -35.5 0.32 1 Parsed for domains: Model Domain seq-f seq-t hmm-f hmm-t score E-value -------- ------- ----- ----- ----- ----- ----- ------- Pyr_redox_2 1/1 3 92 .. 1 265 [] -35.5 0.32 Pyr_redox_dim 1/1 120 229 .. 1 117 [] 137.1 3.2e-37 Alignments of top-scoring domains: Pyr_redox_2: domain 1 of 1, from 3 to 92: score -35.5, E = 0.32 RF xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx *->dvvIIGgGpAGlaAAiraarlgfgkkglkvalieketlgGGtcynrg rl ++ Rabbit4Lib 3 ------------------VRL-------------NTKV--------- 9 RF xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx cipkkvllgaaevgeelkhaadgayGiidagevkfdwakllarkevveql + + Rabbit4Lib 10 --------------TGA--------------------------------- 12 RF xxxxxxxxxxxxxxxxxxx xxxxxxxxxxxxxxxxxxxxxxxxxxxxxx rkkgvevllgtevtgidvi.gftvklkdgetVVegedgrgkallggeetl +k + + ++i+ ++g g+ e++ Rabbit4Lib 13 -TKKPDGKI---DVSIEAAsG-----------------------GKAEVI 35 RF xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx tydkliiATGarprrppnepiPGvdlelklevftlgrsvitsdDalalre t+d l++ G rp Rabbit4Lib 36 TCDVLLVCIGRRP------------------------------------- 48 RF xxxxxxxxxxxxxxxxxxxxxxxxxx xxxxxxxxxxxxxxxxxxxxxxx klslfpkkkeeaagklalrrrPnlte.LaLlekaGlelderiGgIvVDey +t++L+L e++G+eld+r G+I+V+ + Rabbit4Lib 49 -----------------------FTQnLGL-EELGIELDPR-GRIPVNTR 73 RF xxxxxxxxxxxxxxxxxxxx lrTssvpgIyAaGDvaeggl<-* ++T +p+IyA+GDv++g++ Rabbit4Lib 74 FQT-KIPNIYAIGDVVAGPM 92 Pyr_redox_dim: domain 1 of 1, from 120 to 229: score 137.1, E = 3.2e-37 *->vPsvvftdPEiAsVGLTEeeAkekGgdednvkvgkfpFaangrAlay vPsv++t+PE+A+VG++Ee++ke+G++ +kvgkfpFaan+rA+++ Rabbit4Lib 120 VPSVIYTHPEVAWVGKSEEQLKEEGIE---YKVGKFPFAANSRAKTN 163 gegateGfvKlvadaetgriLGaHivGpnAgEelIqeaalAikmGaTaee + t+G+vK++ ++t++ i+Gp+AgE +++eaalA+++Ga++e Rabbit4Lib 164 AD--TDGMVKILGQKSTEEYWERXILGPGAGE-MVNEAALALEYGASCE- 209 dlantihaHPTlsEalkeaa<-* d+a+ + TlsEa++ea Rabbit4Lib 210 DIAESVMRIXTLSEAFREAN 229 // Query: Rabbit4Lib.638.C1 441 1 462 nseq=2; minus strand; translated Scores for sequence family classification (score includes all domains): Model Description Score E-value N -------- ----------- ----- ------- --- [no hits above thresholds] Parsed for domains: Model Domain seq-f seq-t hmm-f hmm-t score E-value -------- ------- ----- ----- ----- ----- ----- ------- [no hits above thresholds] Alignments of top-scoring domains: [no hits above thresholds] // Query: Rabbit4Lib.640.C1 80 1 105 nseq=2; translated Scores for sequence family classification (score includes all domains): Model Description Score E-value N -------- ----------- ----- ------- --- [no hits above thresholds] Parsed for domains: Model Domain seq-f seq-t hmm-f hmm-t score E-value -------- ------- ----- ----- ----- ----- ----- ------- [no hits above thresholds] Alignments of top-scoring domains: [no hits above thresholds] // Query: Rabbit4Lib.641.C1 147 1 387 nseq=2; minus strand; translated Scores for sequence family classification (score includes all domains): Model Description Score E-value N -------- ----------- ----- ------- --- RRM_1 RNA recognition motif. (a.k.a. RRM, RBD, or 56.8 4.7e-13 1 Parsed for domains: Model Domain seq-f seq-t hmm-f hmm-t score E-value -------- ------- ----- ----- ----- ----- ----- ------- RRM_1 1/1 23 93 .. 1 74 [] 56.8 4.7e-13 Alignments of top-scoring domains: RRM_1: domain 1 of 1, from 23 to 93: score 56.8, E = 4.7e-13 *->lfVgNLppdtteedLkdlFskfGpiesikivrDttretgrskGfaFV fV+ +p+ + ++L+++F++fG i + ++ D +etg ++G++ + Rabbit4Lib 23 AFVRKIPWTAASSELRKHFAQFGHIRKCTVPFD--KETGFHRGMGWI 67 eFedeedAekAldalnGkelggrelrv<-* +F +ee+ + Al+ +++++g +l Rabbit4Lib 68 QFSSEEELQNALQ-QENHIIDGVKLQF 93 // Query: Rabbit4Lib.642.C1 500 39 327 nseq=3; minus strand; translated Scores for sequence family classification (score includes all domains): Model Description Score E-value N -------- ----------- ----- ------- --- UPF0197 Uncharacterised protein family (UPF0197) 194.8 1.4e-54 1 Parsed for domains: Model Domain seq-f seq-t hmm-f hmm-t score E-value -------- ------- ----- ----- ----- ----- ----- ------- UPF0197 1/1 3 79 .. 1 79 [] 194.8 1.4e-54 Alignments of top-scoring domains: UPF0197: domain 1 of 1, from 3 to 79: score 194.8, E = 1.4e-54 *->lekMnRYtsPVNpAvfPhLttvLlaiGlfftAwFfvfeVtrkStKys le+M+RYtsPVNpAvfPhLt+vLlaiG+fftAwFfv+eVt StKy+ Rabbit4Lib 3 LEAMSRYTSPVNPAVFPHLTVVLLAIGMFFTAWFFVYEVT--STKYT 47 RdllKELlIslvaSvFLGFGvvFLLLwVGIYV<-* Rd++KELlIslvaS+F+GFGv+FLLLwVGI Rabbit4Lib 48 RDIYKELLISLVASLFMGFGVLFLLLWVGILS 79 // Query: Rabbit4Lib.645.C1 643 1 628 nseq=5; minus strand; translated Scores for sequence family classification (score includes all domains): Model Description Score E-value N -------- ----------- ----- ------- --- Cpn60_TCP1 TCP-1/cpn60 chaperonin family -252.3 5.2 1 Parsed for domains: Model Domain seq-f seq-t hmm-f hmm-t score E-value -------- ------- ----- ----- ----- ----- ----- ------- Cpn60_TCP1 1/1 1 193 [. 1 537 [] -252.3 5.2 Alignments of top-scoring domains: Cpn60_TCP1: domain 1 of 1, from 1 to 193: score -252.3, E = 5.2 *->ladivkttLGPkGrnKmlvngsyGditiTnDGaTIlkeielqhPyen P Rabbit4Lib 1 ---------------------X---------------------P--- 2 lgAkllveaskkQddevGDGTTtvvvLAgeLLkeaekLinaGlhPtqIir Rabbit4Lib - -------------------------------------------------- - GyelAaekaleaLkklsipvetndkinkeellkvAktslnsKvisgnsia Rabbit4Lib - -------------------------------------------------- - dAlakvgvdavitveeekndkysfdldnievvkglGgsifdsglisGyvi + +d+ +++k Rabbit4Lib 3 -----------------------TRPDKAQIEKR---------------- 13 tkeerhpvelempkrlendaKIavlncpLeiLelktetkrplviiasded +++++e Rabbit4Lib 14 ------------------------IQEIIE-------------------- 19 leaLstlEenklkgkvkviavkkRvcdgpnvvitqkegidDiAlhtladt + l+ Rabbit4Lib 20 -----------------------------------Q----------LD-- 22 visdkagImalrrvskedlgrlakvlgakvvttligpgagsedeeeiGer i+ + Rabbit4Lib 23 ----------------------------------IT-T------------ 25 devleqeigestsddkvtkleerkarLsgkvatIllRGateveldElerr e ++++kl+er+a+Ls +va+++++G ++ve++E+++r Rabbit4Lib 26 --------SE----YEKEKLNERLAKLSDGVAVLKVGGTSDVEVNEKKDR 63 ieDAlnavkaaiedgriVPGGGaaEielakaLdkykakslegkeqlavea ++DAlna++aa+e+g iV GGG+a++++ aLd+ + ++++++++e+ Rabbit4Lib 64 VTDALNATRAAVEEG-IVLGGGCALLRCIPALDSL-TPA-NEDQKIGIEI 110 fakALeviPkiLAeNAGldgidviskLraehakGnsdlknyGydaatgki ++ L ++ +++A+NAG++g+ ++ k++ + +Gyda+ g + Rabbit4Lib 111 IKRTLKIPAMTIAKNAGVEGSLIVEKILQSSP--E-----IGYDAMLGDF 153 vdmveaGIiDplkVkrqalklAteaAsliLtiDdiImakp<-* v+mve+GIiDp+kV+r+al A+++Asl+ t +++++++p Rabbit4Lib 154 VNMVEKGIIDPTKVVRTALLDAAGVASLLTTAEVVVTEIP 193 // Query: Rabbit4Lib.648.C1 169 1 143 nseq=2; translated Scores for sequence family classification (score includes all domains): Model Description Score E-value N -------- ----------- ----- ------- --- [no hits above thresholds] Parsed for domains: Model Domain seq-f seq-t hmm-f hmm-t score E-value -------- ------- ----- ----- ----- ----- ----- ------- [no hits above thresholds] Alignments of top-scoring domains: [no hits above thresholds] // Query: Rabbit4Lib.649.C1 977 31 549 nseq=2; minus strand; translated Scores for sequence family classification (score includes all domains): Model Description Score E-value N -------- ----------- ----- ------- --- efhand EF hand 115.2 1.2e-30 4 Parsed for domains: Model Domain seq-f seq-t hmm-f hmm-t score E-value -------- ------- ----- ----- ----- ----- ----- ------- efhand 1/4 32 60 .. 1 29 [] 40.1 4.9e-08 efhand 2/4 68 96 .. 1 29 [] 28.6 0.00014 efhand 3/4 105 133 .. 1 29 [] 25.1 0.0017 efhand 4/4 141 169 .. 1 29 [] 39.2 9e-08 Alignments of top-scoring domains: efhand: domain 1 of 4, from 32 to 60: score 40.1, E = 4.9e-08 *->elkeaFkefDkDgDGkIsfeEfkaalkkl<-* e++eaF++fD+Dg G+I+++E+k a+++l Rabbit4Lib 32 EIREAFDLFDADGTGTIDVKELKVAMRAL 60 efhand: domain 2 of 4, from 68 to 96: score 28.6, E = 0.00014 *->elkeaFkefDkDgDGkIsfeEfkaalkkl<-* e+k++++e+Dk g Gk +f +f+++++++ Rabbit4Lib 68 EIKKMISEIDKEGTGKMNFSDFLTVMTQK 96 efhand: domain 3 of 4, from 105 to 133: score 25.1, E = 0.0017 *->elkeaFkefDkDgDGkIsfeEfkaalkkl<-* e+ +aFk+fD D GkIsf+ +k++ k+l Rabbit4Lib 105 EILKAFKLFDDDETGKISFKNLKRVAKEL 133 efhand: domain 4 of 4, from 141 to 169: score 39.2, E = 9e-08 *->elkeaFkefDkDgDGkIsfeEfkaalkkl<-* el+e+++e+D+DgDG+++ +Ef++++kk+ Rabbit4Lib 141 ELQEMIDEADRDGDGEVNEQEFLRIMKKT 169 // Query: Rabbit4Lib.651.C1 165 1 233 nseq=4; translated Scores for sequence family classification (score includes all domains): Model Description Score E-value N -------- ----------- ----- ------- --- [no hits above thresholds] Parsed for domains: Model Domain seq-f seq-t hmm-f hmm-t score E-value -------- ------- ----- ----- ----- ----- ----- ------- [no hits above thresholds] Alignments of top-scoring domains: [no hits above thresholds] // Query: Rabbit4Lib.652.C2 990 120 506 nseq=2; translated Scores for sequence family classification (score includes all domains): Model Description Score E-value N -------- ----------- ----- ------- --- Prothymosin Prothymosin/parathymosin family 2.3 0.72 1 Parsed for domains: Model Domain seq-f seq-t hmm-f hmm-t score E-value -------- ------- ----- ----- ----- ----- ----- ------- Prothymosin 1/1 2 100 .. 1 111 [] 2.3 0.72 Alignments of top-scoring domains: Prothymosin: domain 1 of 1, from 2 to 100: score 2.3, E = 0.72 *->sDAAvDtssEittkDLKEKKEvvEEAEnGRDAPAdgnaqnEEnGEqE s+ v+ ++E+ kDLKEKKE vEE GR ++EEnG E Rabbit4Lib 2 SEKSVEAAAELSAKDLKEKKEKVEE-KAGRKERKKEVVEEEENGAEE 47 ADnEvDEEeEEGGEEEeeeeeGDGEEEDGDEDEeAEaatdKRvAEDDEDd + E EEe E ++ EE+D E + KR+AE E+d Rabbit4Lib 48 EEEETAEEERKRMKEK-KKMRKKXEEDD-------EGPALKRAAE--EED 87 DvetKKqKktDEDD<-* + + K+qK t+ Rabbit4Lib 88 EADPKRQK-TENXG 100 // Query: Rabbit4Lib.652.C3 56 1 96 nseq=2; minus strand; translated Scores for sequence family classification (score includes all domains): Model Description Score E-value N -------- ----------- ----- ------- --- [no hits above thresholds] Parsed for domains: Model Domain seq-f seq-t hmm-f hmm-t score E-value -------- ------- ----- ----- ----- ----- ----- ------- [no hits above thresholds] Alignments of top-scoring domains: [no hits above thresholds] // Query: Rabbit4Lib.653.C1 596 1 558 nseq=2; minus strand; translated Scores for sequence family classification (score includes all domains): Model Description Score E-value N -------- ----------- ----- ------- --- HCaRG HCaRG protein 202.8 5.2e-57 1 DUF1296 Protein of unknown function (DUF1296) -4.3 2.6 1 Parsed for domains: Model Domain seq-f seq-t hmm-f hmm-t score E-value -------- ------- ----- ----- ----- ----- ----- ------- DUF1296 1/1 53 105 .. 1 61 [] -4.3 2.6 HCaRG 1/1 11 184 .. 1 196 [] 202.8 5.2e-57 Alignments of top-scoring domains: DUF1296: domain 1 of 1, from 53 to 105: score -4.3, E = 2.6 *->ipaelrkiiQsikEvVgsqHSdadIyamLkEcnmDPnEtvqkLLsqD l i Q k Vg+ Sd++I+ L n+ E++ k L Rabbit4Lib 53 WMHVLEDITQFFKAAVGKNLSDEEIFQQLNQLNSSHQEAIMKCL--- 96 pFHEVKsKReKKKE<-* Ks ++ K Rabbit4Lib 97 -----KSRKDEIKQ 105 HCaRG: domain 1 of 1, from 11 to 184: score 202.8, E = 5.2e-57 *->lslLkkldseqlrqLlsvifekLlgqaeselseeeeellaaleklaa l++L+kl++e ++qLl++++++++g+a++ +++ Rabbit4Lib 11 LWRLQKLPAELGPQLLHKTIDGICGRAYPL-------------SQDY 44 sasvppeelkhllaglstllksalklPkhslkpdelqqqLkeqlgLdeel +++ e++h+l++++ ++k+a++ ++l+ +e+ qqL+ +L++ + Rabbit4Lib 45 QSIWDSTEWMHVLEDITQFFKAAVG---KNLSDEEIFQQLN---QLNSSH 88 aedlskvykshrkelreslsqqslslpsAqlsdlqWRvdvqlsSsalars +e+++k++ks+++e++++l++++++++sAql+d++W+++++lsS+++a + Rabbit4Lib 89 QEAIMKCLKSRKDEIKQALLGEIIDISSAQLQDFDWQLKLALSSDKIATL 138 kgsPsvlLqLklvnndgqsveavtfElsleeLqeLlnkLeealkeleal< + +P++ LqL++++n ++v+++++E+s+eeLq+L+n+Le+a+k++ +l Rabbit4Lib 139 Q-MPLLNLQLDVKEN--GEVKPYSIEMSKEELQNLINSLEAANKVVLQL 184 -* Rabbit4Lib - - // Query: Rabbit4Lib.657.C1 483 1 567 nseq=2; minus strand; translated Scores for sequence family classification (score includes all domains): Model Description Score E-value N -------- ----------- ----- ------- --- [no hits above thresholds] Parsed for domains: Model Domain seq-f seq-t hmm-f hmm-t score E-value -------- ------- ----- ----- ----- ----- ----- ------- [no hits above thresholds] Alignments of top-scoring domains: [no hits above thresholds] // Query: Rabbit4Lib.665.C1 202 104 372 nseq=11; translated Scores for sequence family classification (score includes all domains): Model Description Score E-value N -------- ----------- ----- ------- --- [no hits above thresholds] Parsed for domains: Model Domain seq-f seq-t hmm-f hmm-t score E-value -------- ------- ----- ----- ----- ----- ----- ------- [no hits above thresholds] Alignments of top-scoring domains: [no hits above thresholds] // Query: Rabbit4Lib.665.C2 202 92 360 nseq=2; translated Scores for sequence family classification (score includes all domains): Model Description Score E-value N -------- ----------- ----- ------- --- [no hits above thresholds] Parsed for domains: Model Domain seq-f seq-t hmm-f hmm-t score E-value -------- ------- ----- ----- ----- ----- ----- ------- [no hits above thresholds] Alignments of top-scoring domains: [no hits above thresholds] // Query: Rabbit4Lib.665.C3 124 1 280 nseq=2; minus strand; translated Scores for sequence family classification (score includes all domains): Model Description Score E-value N -------- ----------- ----- ------- --- 4F5 4F5 protein family 17.2 0.0036 1 Parsed for domains: Model Domain seq-f seq-t hmm-f hmm-t score E-value -------- ------- ----- ----- ----- ----- ----- ------- 4F5 1/1 7 47 .. 1 94 [] 17.2 0.0036 Alignments of top-scoring domains: 4F5: domain 1 of 1, from 7 to 47: score 17.2, E = 0.0036 *->MtRGKTGKPKKSVNRTQRIIKKRKPKSRPRNFDGNQRElARekNlKK tR Rabbit4Lib 7 ATR-------------------------------------------- 9 qadskKRqGAsGKrkddgLtaeqRkerdAelMreKQakAaakkaAeA<-* + +s ddgL+a++Rk+rd+e+M++KQ+kA++kk++++ Rabbit4Lib 10 LRESXR---------DDGLSAAARKQRDSEIMQQKQKKANEKKEEPK 47 // Query: Rabbit4Lib.666.C1 31 1 186 nseq=2; minus strand; translated Scores for sequence family classification (score includes all domains): Model Description Score E-value N -------- ----------- ----- ------- --- [no hits above thresholds] Parsed for domains: Model Domain seq-f seq-t hmm-f hmm-t score E-value -------- ------- ----- ----- ----- ----- ----- ------- [no hits above thresholds] Alignments of top-scoring domains: [no hits above thresholds] // Query: Rabbit4Lib.666.C2 110 399 540 nseq=2; minus strand; translated Scores for sequence family classification (score includes all domains): Model Description Score E-value N -------- ----------- ----- ------- --- [no hits above thresholds] Parsed for domains: Model Domain seq-f seq-t hmm-f hmm-t score E-value -------- ------- ----- ----- ----- ----- ----- ------- [no hits above thresholds] Alignments of top-scoring domains: [no hits above thresholds] // Query: Rabbit4Lib.666.C3 141 200 433 nseq=4; minus strand; translated Scores for sequence family classification (score includes all domains): Model Description Score E-value N -------- ----------- ----- ------- --- [no hits above thresholds] Parsed for domains: Model Domain seq-f seq-t hmm-f hmm-t score E-value -------- ------- ----- ----- ----- ----- ----- ------- [no hits above thresholds] Alignments of top-scoring domains: [no hits above thresholds] // Query: Rabbit4Lib.668.C1 618 132 533 nseq=2; minus strand; translated Scores for sequence family classification (score includes all domains): Model Description Score E-value N -------- ----------- ----- ------- --- Ribosomal_S8e Ribosomal protein S8e 72.5 8.9e-18 1 Parsed for domains: Model Domain seq-f seq-t hmm-f hmm-t score E-value -------- ------- ----- ----- ----- ----- ----- ------- Ribosomal_S8e 1/1 1 115 [. 1 260 [] 72.5 8.9e-18 Alignments of top-scoring domains: Ribosomal_S8e: domain 1 of 1, from 1 to 115: score 72.5, E = 8.9e-18 *->MGIsrdgrhkRKaTGGkrkpherKKRKyELGRePanTklgaeerrvr Rabbit4Lib - ----------------------------------------------- - tvRtRGGnkKvRalFrldtgNfswasegktrKtrildVvenasnnelvrt tri+dVv+nasnnelvrt Rabbit4Lib 1 --------------------------------TRIIDVVYNASNNELVRT 18 ntivKgaiielDaapfrqwyvlhygiklkRKkKagkakvplpkvravskk +t+vK++i+ +D +p+rqwy+ hy+++l+RKk +ak++ +++++++kk Rabbit4Lib 19 KTLVKNCIVLIDSTPYRQWYESHYALPLGRKK---GAKLTPEEEEILNKK 65 eafkviktgktrkk.wkrrimdtkvnfvneeqvrtgrllarfIVHYrpmG +++k++k++++rkk++k + +++eeq+++g+lla Rabbit4Lib 66 RSKKIQKKYDERKKnAK-------ISSLLEEQFQQGKLLA---------- 98 LRfkKahvThpElkktfhlpiigvkknpsspmyTsLGvitkGTvleAnVt +++ Rabbit4Lib 99 -----------------------------------------------CIA 101 SRPGQdGradGylL<-* SRPGQ+GradGy+L Rabbit4Lib 102 SRPGQCGRADGYVL 115 // Query: Rabbit4Lib.668.C2 731 25 651 nseq=5; minus strand; translated Scores for sequence family classification (score includes all domains): Model Description Score E-value N -------- ----------- ----- ------- --- Ribosomal_S8e Ribosomal protein S8e 368.8 5.7e-107 1 Parsed for domains: Model Domain seq-f seq-t hmm-f hmm-t score E-value -------- ------- ----- ----- ----- ----- ----- ------- Ribosomal_S8e 1/1 1 190 [. 1 260 [] 368.8 5.7e-107 Alignments of top-scoring domains: Ribosomal_S8e: domain 1 of 1, from 1 to 190: score 368.8, E = 5.7e-107 *->MGIsrdgrhkRKaTGGkrkpherKKRKyELGRePanTklgaeerrvr MGIsrd++hkR++TGGkrkp+ +KKRKyELGR++anTk+g+ rr++ Rabbit4Lib 1 MGISRDNWHKRRKTGGKRKPY-HKKRKYELGRPAANTKIGP--RRIH 44 tvRtRGGnkKvRalFrldtgNfswasegktrKtrildVvenasnnelvrt tvR+RGGnkK+Ral rld+gNfsw+se++trKtri+dVv+nasnnelvrt Rabbit4Lib 45 TVRVRGGNKKYRAL-RLDVGNFSWGSECCTRKTRIIDVVYNASNNELVRT 93 ntivKgaiielDaapfrqwyvlhygiklkRKkKagkakvplpkvravskk +t+vK++i+ +D +p+rqwy+ hy+++l+RKk +ak++ +++++++kk Rabbit4Lib 94 KTLVKNCIVLIDSTPYRQWYESHYALPLGRKK---GAKLTPEEEEILNKK 140 eafkviktgktrkk.wkrrimdtkvnfvneeqvrtgrllarfIVHYrpmG +++k++k++++rkk++k + +++eeq+++g+lla Rabbit4Lib 141 RSKKIQKKYDERKKnAK-------ISSLLEEQFQQGKLLA---------- 173 LRfkKahvThpElkktfhlpiigvkknpsspmyTsLGvitkGTvleAnVt +++ Rabbit4Lib 174 -----------------------------------------------CIA 176 SRPGQdGradGylL<-* SRPGQ+GradGy+L Rabbit4Lib 177 SRPGQCGRADGYVL 190 // Query: Rabbit4Lib.670.C1 19 41 213 nseq=2; translated Scores for sequence family classification (score includes all domains): Model Description Score E-value N -------- ----------- ----- ------- --- [no hits above thresholds] Parsed for domains: Model Domain seq-f seq-t hmm-f hmm-t score E-value -------- ------- ----- ----- ----- ----- ----- ------- [no hits above thresholds] Alignments of top-scoring domains: [no hits above thresholds] // Query: Rabbit4Lib.671.C1 226 1 207 nseq=2; minus strand; translated Scores for sequence family classification (score includes all domains): Model Description Score E-value N -------- ----------- ----- ------- --- ShTK ShTK domain 0.1 4.7 1 Parsed for domains: Model Domain seq-f seq-t hmm-f hmm-t score E-value -------- ------- ----- ----- ----- ----- ----- ------- ShTK 1/1 25 59 .. 1 43 [] 0.1 4.7 Alignments of top-scoring domains: ShTK: domain 1 of 1, from 25 to 59: score 0.1, E = 4.7 *->CvDyvDpasdCaswaslGevCtnppYyqdfmksnCpkTCGfCs<-* C+ y + +s+C ++ ++ C +++k nC+ +C +C+ Rabbit4Lib 25 CE-YENIYSNCDDLERMLS-C-----EHQLVKNNCKASC-YCK 59 // Query: Rabbit4Lib.673.C1 752 250 1056 nseq=2; minus strand; translated Scores for sequence family classification (score includes all domains): Model Description Score E-value N -------- ----------- ----- ------- --- Peptidase_S9 Prolyl oligopeptidase family 169.9 4.1e-47 1 Parsed for domains: Model Domain seq-f seq-t hmm-f hmm-t score E-value -------- ------- ----- ----- ----- ----- ----- ------- Peptidase_S9 1/1 94 267 .. 1 229 [] 169.9 4.1e-47 Alignments of top-scoring domains: Peptidase_S9: domain 1 of 1, from 94 to 267: score 169.9, E = 4.1e-47 *->psfsvwnlqlladrGyvvavaniRGsggyGrawhdagkrdlgqnefd ++++ w +l++ G+v+a +++RG++++G++ a++r+lg +e++ Rabbit4Lib 94 FAVN-WISYLASKEGMVIALVDGRGTAFQGDKLLYAVYRKLGVYEVE 139 DfiaaaeyLieqgpyvDpdrlaiwGgSyGGyltgaalnkqrpdlFkaava D+i+a++++ie g ++D+ r+aiwG+SyGGy + al+ + lFk+++a Rabbit4Lib 140 DQITAVRKFIEMG-FIDEKRIAIWGWSYGGYVSSLALA-SGTGLFKCGIA 187 vvpvvDwltymsdtslpysfteaeymewgnpwdeneegYrylspyspydn v+pv+ w +y s+ +te ++m+ ++ +d n e Y +s+++ ++ Rabbit4Lib 188 VAPVSSWEYYASI------YTE-RFMGLPTKED-NFEPY-KNSTVMARAE 228 vkaqaypplLlihGlhDdRVpyqealklvaaLqalktGknpflllifpde ++ +++ +++ihG++Dd+V++q++++ ++aL ++++ Rabbit4Lib 229 YF--RNVDFFFIHGTADDNVHFQNSAQIAKALV--NAQVD---------- 264 GHdLSgggkprnkrlkeyarllaFllkvlggt<-* +++ Rabbit4Lib 265 -----------FQA------------------ 267 // Query: Rabbit4Lib.676.C1 180 410 755 nseq=2; translated Scores for sequence family classification (score includes all domains): Model Description Score E-value N -------- ----------- ----- ------- --- [no hits above thresholds] Parsed for domains: Model Domain seq-f seq-t hmm-f hmm-t score E-value -------- ------- ----- ----- ----- ----- ----- ------- [no hits above thresholds] Alignments of top-scoring domains: [no hits above thresholds] // Query: Rabbit4Lib.681.C1 495 43 461 nseq=3; minus strand; translated Scores for sequence family classification (score includes all domains): Model Description Score E-value N -------- ----------- ----- ------- --- [no hits above thresholds] Parsed for domains: Model Domain seq-f seq-t hmm-f hmm-t score E-value -------- ------- ----- ----- ----- ----- ----- ------- [no hits above thresholds] Alignments of top-scoring domains: [no hits above thresholds] // Query: Rabbit4Lib.683.C1 494 38 232 nseq=3; minus strand; translated Scores for sequence family classification (score includes all domains): Model Description Score E-value N -------- ----------- ----- ------- --- [no hits above thresholds] Parsed for domains: Model Domain seq-f seq-t hmm-f hmm-t score E-value -------- ------- ----- ----- ----- ----- ----- ------- [no hits above thresholds] Alignments of top-scoring domains: [no hits above thresholds] // Query: Rabbit4Lib.683.C2 387 1 196 nseq=2; minus strand; translated Scores for sequence family classification (score includes all domains): Model Description Score E-value N -------- ----------- ----- ------- --- [no hits above thresholds] Parsed for domains: Model Domain seq-f seq-t hmm-f hmm-t score E-value -------- ------- ----- ----- ----- ----- ----- ------- [no hits above thresholds] Alignments of top-scoring domains: [no hits above thresholds] // Query: Rabbit4Lib.686.C1 302 1 374 nseq=2; minus strand; translated Scores for sequence family classification (score includes all domains): Model Description Score E-value N -------- ----------- ----- ------- --- DUF755 Domain of unknown function (DUF755) -55.5 4.9 1 Parsed for domains: Model Domain seq-f seq-t hmm-f hmm-t score E-value -------- ------- ----- ----- ----- ----- ----- ------- DUF755 1/1 8 118 .. 1 114 [] -55.5 4.9 Alignments of top-scoring domains: DUF755: domain 1 of 1, from 8 to 118: score -55.5, E = 4.9 *->qNkknsPsPvTSsKqlRsRvQqqtnntssTtLTkedesLQkkLqK.. + kk+ P S s v qt++ ++ + L k+ q ++ Rabbit4Lib 8 VGKKSVTPPSSSINEELSEV-LQTLQDEFGQMSFDHQQLAKLIQEsp 53 ..ELkKTl..kLkhLfsqLqsqSQQ.nssskhssKkkkHrRhRaRKKkkh + ELk l+ +L L +++ ++ Q + + k++ +++ + KK + Rabbit4Lib 54 tvELKENLecELEALVGRMEAKANQiTKVRKYQAQ-LEKQKTEKQKKELR 102 hkkkrstSSSsSSdnesSSSsESs<-* kk+ +e+ SSs s Rabbit4Lib 103 ATKKTP--------EEEGSSSNRS 118 // Query: Rabbit4Lib.689.C1 784 1 641 nseq=2; minus strand; translated Scores for sequence family classification (score includes all domains): Model Description Score E-value N -------- ----------- ----- ------- --- SAM_1 SAM domain (Sterile alpha motif) 120.3 3.6e-32 1 SAM_2 SAM domain (Sterile alpha motif) 102.4 8.8e-27 1 Pkinase_Tyr Protein tyrosine kinase -12.1 4.1e-11 1 Parsed for domains: Model Domain seq-f seq-t hmm-f hmm-t score E-value -------- ------- ----- ----- ----- ----- ----- ------- Pkinase_Tyr 1/1 2 107 .. 1 272 [] -12.1 4.1e-11 SAM_1 1/1 138 202 .. 1 66 [] 120.3 3.6e-32 SAM_2 1/1 137 204 .. 1 72 [] 102.4 8.8e-27 Alignments of top-scoring domains: Pkinase_Tyr: domain 1 of 1, from 2 to 107: score -12.1, E = 4.1e-11 *->lklgkkLGeGaFGeVykGtlkgsgegtkikVAVKtLkeigasseeie ++ ++ Rabbit4Lib 2 ----------------HASAY-------------------------- 6 redFlrEAsiMkklGdHpNiVrLlGvctkegePggpglyiVtEymegGdL Rabbit4Lib - -------------------------------------------------- - ldfLrkhregrpLtlkdLlsfalQiAkGMeYLesknfvHRDLAARNcLVs Rabbit4Lib - -------------------------------------------------- - enlvVKIsDFGLaRdiynddyYvrkkgggklPvkWmAPEslkygkFtskS Y +++ ggk+P++W+APE+++y+kFts+S Rabbit4Lib 7 ---------------------Y-TSSLGGKIPIRWTAPEAIAYRKFTSAS 34 DVWSFGVlLWEiftlGeqPFYpgmsneevlellyedGyRLprPenCPdel DVWS+G+++WE++++Ge P Y++msn++v++ + e++yRLp+P++CP l Rabbit4Lib 35 DVWSYGIVMWEVMSYGERP-YWDMSNQDVINAV-EQDYRLPPPMDCPTAL 82 YdlMlqCWaedPedRPtFselverL<-* ++lMl CW +d + RP Fs++v+ L Rabbit4Lib 83 HQLMLDCWVRDRNLRPKFSQIVNTL 107 SAM_1: domain 1 of 1, from 138 to 202: score 120.3, E = 3.6e-32 *->dgwsvesVgeWLesigllgqYidnFlaagyidgdtllqlteeDLedl d++++ +Vg+WL++i++ g+Y+++F++ag+ ++d+++q+t+eDL+++ Rabbit4Lib 138 DYTTFTTVGDWLDAIKM-GRYKESFVSAGFASFDLVAQMTAEDLLRI 183 GvtllGHrkkIlssIqgLk<-* Gvtl+GH+kkIlssIq+++ Rabbit4Lib 184 GVTLAGHQKKILSSIQDMR 202 SAM_2: domain 1 of 1, from 137 to 204: score 102.4, E = 8.8e-27 *->veswslesvaeWLesiglegqYkdnFsdqgitglellllrlteedLa ++++++ +v++WL++i++ g+Yk++F ++g+ +++l+ +++t+edL Rabbit4Lib 137 PDYTTFTTVGDWLDAIKM-GRYKESFVSAGFASFDLV-AQMTAEDL- 180 klalGitsvghRkkilskiqelkqq<-* + ++G+t++gh+kkils+iq+++ q Rabbit4Lib 181 L-RIGVTLAGHQKKILSSIQDMRLQ 204 // Query: Rabbit4Lib.690.C1 567 1 478 nseq=3; minus strand; translated Scores for sequence family classification (score includes all domains): Model Description Score E-value N -------- ----------- ----- ------- --- W2 eIF4-gamma/eIF5/eIF2-epsilon 127.5 2.4e-34 1 Parsed for domains: Model Domain seq-f seq-t hmm-f hmm-t score E-value -------- ------- ----- ----- ----- ----- ----- ------- W2 1/1 74 154 .. 1 87 [] 127.5 2.4e-34 Alignments of top-scoring domains: W2: domain 1 of 1, from 74 to 154: score 127.5, E = 2.4e-34 *->eeeqidlLlaiEefcvkleeelvikllakiLkslYDaDileEeaIlk +++++lLl+i+e+c+++ ++ +k+++ki++++Y+a++l+Ee+Ilk Rabbit4Lib 74 GQSELTLLLKIQEYCYDN-IHF-MKAFQKIVVLFYKAEVLSEEPILK 118 WyekadsadeskEgkskvrkqakkFitWLkeAeEEEseee<-* Wy++a++a++ ks++++q+kkF++WLk+AeEE+++e Rabbit4Lib 119 WYKDAHVAKG----KSVFLEQMKKFVEWLKNAEEESESEA 154 // Query: Rabbit4Lib.691.C1 1270 1 534 nseq=3; minus strand; translated Scores for sequence family classification (score includes all domains): Model Description Score E-value N -------- ----------- ----- ------- --- TPR_2 Tetratricopeptide repeat 13.4 5.6 1 Parsed for domains: Model Domain seq-f seq-t hmm-f hmm-t score E-value -------- ------- ----- ----- ----- ----- ----- ------- TPR_2 1/1 96 129 .. 1 34 [] 13.4 5.6 Alignments of top-scoring domains: TPR_2: domain 1 of 1, from 96 to 129: score 13.4, E = 5.6 *->aealynlGlayyklgdyeeAleayekAleldPnn<-* ++ ++l++ y+l++y++Al++ + l +P+n Rabbit4Lib 96 RDYVFYLAVGNYRLKEYDRALKYVRGLLHTEPQN 129 // Query: Rabbit4Lib.692.C1 387 17 246 nseq=4; minus strand; translated Scores for sequence family classification (score includes all domains): Model Description Score E-value N -------- ----------- ----- ------- --- [no hits above thresholds] Parsed for domains: Model Domain seq-f seq-t hmm-f hmm-t score E-value -------- ------- ----- ----- ----- ----- ----- ------- [no hits above thresholds] Alignments of top-scoring domains: [no hits above thresholds] // Query: Rabbit4Lib.693.C1 1496 86 901 nseq=2; minus strand; translated Scores for sequence family classification (score includes all domains): Model Description Score E-value N -------- ----------- ----- ------- --- [no hits above thresholds] Parsed for domains: Model Domain seq-f seq-t hmm-f hmm-t score E-value -------- ------- ----- ----- ----- ----- ----- ------- [no hits above thresholds] Alignments of top-scoring domains: [no hits above thresholds] // Query: Rabbit4Lib.699.C1 225 1 339 nseq=2; minus strand; translated Scores for sequence family classification (score includes all domains): Model Description Score E-value N -------- ----------- ----- ------- --- [no hits above thresholds] Parsed for domains: Model Domain seq-f seq-t hmm-f hmm-t score E-value -------- ------- ----- ----- ----- ----- ----- ------- [no hits above thresholds] Alignments of top-scoring domains: [no hits above thresholds] // Query: Rabbit4Lib.700.C1 460 1 202 nseq=2; minus strand; translated Scores for sequence family classification (score includes all domains): Model Description Score E-value N -------- ----------- ----- ------- --- ATP-synt_E ATP synthase E chain 81.6 1.6e-20 1 Parsed for domains: Model Domain seq-f seq-t hmm-f hmm-t score E-value -------- ------- ----- ----- ----- ----- ----- ------- ATP-synt_E 1/1 2 67 .] 1 89 [] 81.6 1.6e-20 Alignments of top-scoring domains: ATP-synt_E: domain 1 of 1, from 2 to 67: score 81.6, E = 1.6e-20 *->aPPVqVSPLIkfgRysaLlvGiaYGafryrrLskkeADiREWekeRe S LIk+gRysaL +G+aYGa+r ++L++++ e+eR+ Rabbit4Lib 2 ----HASALIKLGRYSALFLGVAYGAKRHSYLKPRA------EEERR 38 veAeekavlkvKraeEKkRiakeEMrylakvlaepseptikk<-* +A+ek + ++E+kRia+e ae+ ++i+k Rabbit4Lib 39 LAAAEKQK-----QDELKRIARE--------RAEAEDDSILK 67 // Query: Rabbit4Lib.701.C1 211 510 617 nseq=2; translated Scores for sequence family classification (score includes all domains): Model Description Score E-value N -------- ----------- ----- ------- --- [no hits above thresholds] Parsed for domains: Model Domain seq-f seq-t hmm-f hmm-t score E-value -------- ------- ----- ----- ----- ----- ----- ------- [no hits above thresholds] Alignments of top-scoring domains: [no hits above thresholds] // Query: Rabbit4Lib.702.C3 431 1 468 nseq=2; translated Scores for sequence family classification (score includes all domains): Model Description Score E-value N -------- ----------- ----- ------- --- [no hits above thresholds] Parsed for domains: Model Domain seq-f seq-t hmm-f hmm-t score E-value -------- ------- ----- ----- ----- ----- ----- ------- [no hits above thresholds] Alignments of top-scoring domains: [no hits above thresholds] // Query: Rabbit4Lib.703.C1 910 105 1526 nseq=2; minus strand; translated Scores for sequence family classification (score includes all domains): Model Description Score E-value N -------- ----------- ----- ------- --- [no hits above thresholds] Parsed for domains: Model Domain seq-f seq-t hmm-f hmm-t score E-value -------- ------- ----- ----- ----- ----- ----- ------- [no hits above thresholds] Alignments of top-scoring domains: [no hits above thresholds] // Query: Rabbit4Lib.704.C1 52 804 915 nseq=2; translated Scores for sequence family classification (score includes all domains): Model Description Score E-value N -------- ----------- ----- ------- --- [no hits above thresholds] Parsed for domains: Model Domain seq-f seq-t hmm-f hmm-t score E-value -------- ------- ----- ----- ----- ----- ----- ------- [no hits above thresholds] Alignments of top-scoring domains: [no hits above thresholds] // Query: Rabbit4Lib.709.C1 390 74 627 nseq=2; minus strand; translated Scores for sequence family classification (score includes all domains): Model Description Score E-value N -------- ----------- ----- ------- --- SRP19 SRP19 protein 80.6 3.2e-20 1 Parsed for domains: Model Domain seq-f seq-t hmm-f hmm-t score E-value -------- ------- ----- ----- ----- ----- ----- ------- SRP19 1/1 3 98 .. 1 110 [] 80.6 3.2e-20 Alignments of top-scoring domains: SRP19: domain 1 of 1, from 3 to 98: score 80.6, E = 3.2e-20 *->qvvwPvYlDskKSRkEGRRvPkElAVEnPslkeIaeAlkkLgLkfim ++++P+Yl+ kK+ +EGRR+P AVEnP++ eI ++++ gL + Rabbit4Lib 3 ICIYPAYLNNKKTIAEGRRIPVSKAVENPTATEIQDVCSAVGLNVLL 49 EsReKkYPrswwessElefrGRVrVelkDDnvdGLPPHtlynKDFPTRek E +K Y r+ w+ +++GRVrV+lk dG +l FP R Rabbit4Lib 50 EK-NKMYSRE-WNR-DVQYKGRVRVQLK--QEDG----SLCLVQFPSR-- 88 LlreIAkkikekr<-* + + + + Rabbit4Lib 89 ---XVSNAVCGRN 98 // Query: Rabbit4Lib.712.C1 576 123 910 nseq=2; minus strand; translated Scores for sequence family classification (score includes all domains): Model Description Score E-value N -------- ----------- ----- ------- --- [no hits above thresholds] Parsed for domains: Model Domain seq-f seq-t hmm-f hmm-t score E-value -------- ------- ----- ----- ----- ----- ----- ------- [no hits above thresholds] Alignments of top-scoring domains: [no hits above thresholds] // Query: Rabbit4Lib.717.C1 400 69 462 nseq=3; minus strand; translated Scores for sequence family classification (score includes all domains): Model Description Score E-value N -------- ----------- ----- ------- --- Mago_nashi Mago nashi protein 211.2 1.6e-59 1 Parsed for domains: Model Domain seq-f seq-t hmm-f hmm-t score E-value -------- ------- ----- ----- ----- ----- ----- ------- Mago_nashi 1/1 6 130 .] 1 143 [] 211.2 1.6e-59 Alignments of top-scoring domains: Mago_nashi: domain 1 of 1, from 6 to 130: score 211.2, E = 1.6e-59 *->dFYvRYYvGHkGkFGHEFLEFefredGklRYAnnsnYknDtliRKEv dFY+RYYvGHkGkFGHEFLEFefr+dGklRYAnnsnYknD +iRKE+ Rabbit4Lib 6 DFYLRYYVGHKGKFGHEFLEFEFRPDGKLRYANNSNYKNDVMIRKEA 52 fvseavLkEvkRivddsEilkEdDenWPepdkvGkqELEillkneHisFe +v ++v++E+kRi+ddsEi kEdD WP+pd+vG+qELEi++++eHisF+ Rabbit4Lib 53 YVHKSVMEELKRIIDDSEITKEDDALWPPPDRVGRQELEIVIGDEHISFT 102 tsKiGsLaDvqnsdDPeGLrvFYYLvqDLKcLvFsLisLhFKikPi<-* tsKiGsL+D + r+ LK+ v i i Rabbit4Lib 103 TSKIGSLIDEISQ------RI-------LKAFVCFTIWYR-----I 130 // Query: Rabbit4Lib.720.C1 657 1 771 nseq=2; minus strand; translated Scores for sequence family classification (score includes all domains): Model Description Score E-value N -------- ----------- ----- ------- --- [no hits above thresholds] Parsed for domains: Model Domain seq-f seq-t hmm-f hmm-t score E-value -------- ------- ----- ----- ----- ----- ----- ------- [no hits above thresholds] Alignments of top-scoring domains: [no hits above thresholds] // Query: Rabbit4Lib.723.C1 850 1 788 nseq=2; minus strand; translated Scores for sequence family classification (score includes all domains): Model Description Score E-value N -------- ----------- ----- ------- --- [no hits above thresholds] Parsed for domains: Model Domain seq-f seq-t hmm-f hmm-t score E-value -------- ------- ----- ----- ----- ----- ----- ------- [no hits above thresholds] Alignments of top-scoring domains: [no hits above thresholds] // Query: Rabbit4Lib.724.C1 205 1 242 nseq=2; minus strand; translated Scores for sequence family classification (score includes all domains): Model Description Score E-value N -------- ----------- ----- ------- --- [no hits above thresholds] Parsed for domains: Model Domain seq-f seq-t hmm-f hmm-t score E-value -------- ------- ----- ----- ----- ----- ----- ------- [no hits above thresholds] Alignments of top-scoring domains: [no hits above thresholds] // Query: Rabbit4Lib.726.C1 179 1 277 nseq=4; minus strand; translated Scores for sequence family classification (score includes all domains): Model Description Score E-value N -------- ----------- ----- ------- --- PX PX domain 29.2 9.6e-05 1 Parsed for domains: Model Domain seq-f seq-t hmm-f hmm-t score E-value -------- ------- ----- ----- ----- ----- ----- ------- PX 1/1 1 81 [. 1 133 [] 29.2 9.6e-05 Alignments of top-scoring domains: PX: domain 1 of 1, from 1 to 81: score 29.2, E = 9.6e-05 *->dsilivvvvdpetsrkkegskkhtyyvyeittktnkewsVkRRYsdF t+ + dF Rabbit4Lib 1 ------------------------------THASG----------DF 7 eeLhekLlrkfpalgrilPplPpKklfgryrk.es.lemtsvkh.ssnnf e+L++ L+r+ + +++PplP+K + ++ ++ ++++++f Rabbit4Lib 8 EWLRSELERESK---VVVPPLPGKA------FlRQlPF-----RgDDGIF 43 deefiekRrkgLeeyLqrllqhPelsnesevvleFLesd<-* d++fie+R++gLe+++++++ hP+ +n +++++FL+ + Rabbit4Lib 44 DDNFIEERKQGLEQFINKVAGHPLAQN-ERCLHMFLQDE 81 // Query: Rabbit4Lib.726.C2 405 1 471 nseq=2; minus strand; translated Scores for sequence family classification (score includes all domains): Model Description Score E-value N -------- ----------- ----- ------- --- PX PX domain 132.9 5.6e-36 1 Parsed for domains: Model Domain seq-f seq-t hmm-f hmm-t score E-value -------- ------- ----- ----- ----- ----- ----- ------- PX 1/1 24 146 .. 1 133 [] 132.9 5.6e-36 Alignments of top-scoring domains: PX: domain 1 of 1, from 24 to 146: score 132.9, E = 5.6e-36 *->dsilivvvvdpetsrkkegskkhtyyvyeittktn......kewsVk ++l+++v++p+t+ g +++++++yei++ktn + + ke++V+ Rabbit4Lib 24 SNFLEIDVSNPQTV----GVGRGRFTTYEIRVKTNlpifklKESTVR 66 RRYsdFeeLhekLlrkfpalgrilPplPpKklfgryrk.es.lemtsvkh RRYsdFe+L++ L+r+ + +++PplP+K + ++ ++ + Rabbit4Lib 67 RRYSDFEWLRSELERESK---VVVPPLPGKA------FlRQlPF-----R 102 .ssnnfdeefiekRrkgLeeyLqrllqhPelsnesevvleFLesd<-* +++++fd++fie+R++gLe+++++++ hP+ +n +++++FL+ + Rabbit4Lib 103 gDDGIFDDNFIEERKQGLEQFINKVAGHPLAQN-ERCLHMFLQDE 146 // Query: Rabbit4Lib.732.C2 183 1334 1672 nseq=3; translated Scores for sequence family classification (score includes all domains): Model Description Score E-value N -------- ----------- ----- ------- --- [no hits above thresholds] Parsed for domains: Model Domain seq-f seq-t hmm-f hmm-t score E-value -------- ------- ----- ----- ----- ----- ----- ------- [no hits above thresholds] Alignments of top-scoring domains: [no hits above thresholds] // Query: Rabbit4Lib.735.C1 345 154 624 nseq=2; minus strand; translated Scores for sequence family classification (score includes all domains): Model Description Score E-value N -------- ----------- ----- ------- --- [no hits above thresholds] Parsed for domains: Model Domain seq-f seq-t hmm-f hmm-t score E-value -------- ------- ----- ----- ----- ----- ----- ------- [no hits above thresholds] Alignments of top-scoring domains: [no hits above thresholds] // Query: Rabbit4Lib.736.C1 501 1 485 nseq=2; minus strand; translated Scores for sequence family classification (score includes all domains): Model Description Score E-value N -------- ----------- ----- ------- --- [no hits above thresholds] Parsed for domains: Model Domain seq-f seq-t hmm-f hmm-t score E-value -------- ------- ----- ----- ----- ----- ----- ------- [no hits above thresholds] Alignments of top-scoring domains: [no hits above thresholds] // Query: Rabbit4Lib.740.C1 247 30 275 nseq=2; minus strand; translated Scores for sequence family classification (score includes all domains): Model Description Score E-value N -------- ----------- ----- ------- --- [no hits above thresholds] Parsed for domains: Model Domain seq-f seq-t hmm-f hmm-t score E-value -------- ------- ----- ----- ----- ----- ----- ------- [no hits above thresholds] Alignments of top-scoring domains: [no hits above thresholds] // Query: Rabbit4Lib.741.C1 538 1 710 nseq=5; minus strand; translated Scores for sequence family classification (score includes all domains): Model Description Score E-value N -------- ----------- ----- ------- --- [no hits above thresholds] Parsed for domains: Model Domain seq-f seq-t hmm-f hmm-t score E-value -------- ------- ----- ----- ----- ----- ----- ------- [no hits above thresholds] Alignments of top-scoring domains: [no hits above thresholds] // Query: Rabbit4Lib.742.C1 82 1 77 nseq=2; translated Scores for sequence family classification (score includes all domains): Model Description Score E-value N -------- ----------- ----- ------- --- [no hits above thresholds] Parsed for domains: Model Domain seq-f seq-t hmm-f hmm-t score E-value -------- ------- ----- ----- ----- ----- ----- ------- [no hits above thresholds] Alignments of top-scoring domains: [no hits above thresholds] // Query: Rabbit4Lib.746.C1 482 120 530 nseq=6; minus strand; translated Scores for sequence family classification (score includes all domains): Model Description Score E-value N -------- ----------- ----- ------- --- [no hits above thresholds] Parsed for domains: Model Domain seq-f seq-t hmm-f hmm-t score E-value -------- ------- ----- ----- ----- ----- ----- ------- [no hits above thresholds] Alignments of top-scoring domains: [no hits above thresholds] // Query: Rabbit4Lib.746.C2 1263 122 1384 nseq=5; minus strand; translated Scores for sequence family classification (score includes all domains): Model Description Score E-value N -------- ----------- ----- ------- --- DnaJ_CXXCXGXG DnaJ central domain (4 repeats) 156.3 5.1e-43 1 DnaJ DnaJ domain 142.2 9.1e-39 1 DnaJ_C DnaJ C terminal region 27.8 2.8e-08 1 NAM No apical meristem (NAM) protein -72.9 7 1 Tyr_Deacylase D-Tyr-tRNA(Tyr) deacylase -87.9 8.8 1 Parsed for domains: Model Domain seq-f seq-t hmm-f hmm-t score E-value -------- ------- ----- ----- ----- ----- ----- ------- DnaJ 1/1 6 68 .. 1 79 [] 142.2 9.1e-39 Tyr_Deacylase 1/1 11 90 .. 1 120 [] -87.9 8.8 NAM 1/1 9 114 .. 1 138 [] -72.9 7 DnaJ_CXXCXGXG 1/1 121 207 .. 1 88 [] 156.3 5.1e-43 DnaJ_C 1/1 220 346 .. 1 123 [] 27.8 2.8e-08 Alignments of top-scoring domains: DnaJ: domain 1 of 1, from 6 to 68: score 142.2, E = 9.1e-39 *->dyYeiLGvprdAsdeeIKKAYRkLAlkyHPDKNpgdpeerktlerae +yY++LGv+++A++ee+KKAYRkLAlkyHPDKNp+++ Rabbit4Lib 6 TYYDVLGVKPNATQEELKKAYRKLALKYHPDKNPNEG---------- 42 skeeAeekFkeineAYevLsDpekRaiYDqyg<-* ekFk+i++AYevLsD +kR++YD+ g Rabbit4Lib 43 ------EKFKQISQAYEVLSDAKKRELYDKGG 68 Tyr_Deacylase: domain 1 of 1, from 11 to 90: score -87.9, E = 8.8 *->lVLVGVthdDTeedadyLarKilnLRiFeD....EeGKMNlSvkDvg +GV+++ T e++++ rK++ L+ D++++E +K+++ ++++ Rabbit4Lib 11 ---LGVKPNATQEELKKAYRKLA-LKYHPDknpnEGEKFKQ-ISQAY 52 GeiLsVSQFTLyADtkKGrRPsFseAAkPdeAeeLYekFvelLRekggsl e+Ls D+kK +eLY+k e+ ++gg+ Rabbit4Lib 53 -EVLS--------DAKK---------------RELYDKGGEQAIKEGGA- 77 kVetGvFGAdMqVsLvNDGPVTiiLDs<-* G FG M+ i+D Rabbit4Lib 78 ---GGGFGSPMD-----------IFDM 90 NAM: domain 1 of 1, from 9 to 114: score -72.9, E = 7 *->lPpGFRFhPTDEELvvhYLrrKvldkslshvveDevIpeiDlykfdP G++ +T EEL Y + + + + e e +i+ Rabbit4Lib 9 DVLGVKPNATQEELKKAYRKLALKYHPDKNPNEGEKFKQIS----QA 51 WeLPekakigekDgEWYFFsprdrKYpn.GdRtnRaTkSG..YWKATGkD +e ++ak e Y ++G + + ++G+++ G + Rabbit4Lib 52 YEVLSDAKKREL-------------YDKgGEQAIKEGGAGggF----GSP 84 rpImrksgnrrliGmKKtLVFYkGerRapkGekTdWvMHEYRLt<-* ++I++ +F+ G +R ++ v H+ + t Rabbit4Lib 85 MDIFD--------------MFFGGGGRMQRERRGKNVVHQLSVT 114 DnaJ_CXXCXGXG: domain 1 of 1, from 121 to 207: score 156.3, E = 5.1e-43 *->GvtkeItlnrqeeCdsChGsGAKpGtspktCptCnGsGiqirvqQgG G+t++++l+++++Cd+C+G+G+K+G ++++Cp+C+G+G+qir++Q G Rabbit4Lib 121 GATRKLALQKNVICDKCEGRGGKKG-AVECCPNCRGTGMQIRIHQIG 166 PggffqsqqtCpdCgGtGkiIkpKdpCksChGkGrvkkrkt<-* Pg+++q+q++C++C+G+G+ I+pKd+CksC+G + v+++k+ Rabbit4Lib 167 PGMVQQIQSVCMECQGHGERISPKDRCKSCNGRKIVREKKI 207 DnaJ_C: domain 1 of 1, from 220 to 346: score 27.8, E = 2.8e-08 *->qrlRlaGeG..eaGenGGppGDLYVvirVkeHkiFeRdGdDLycevp q++ + GeG++e+G+ +pGD +v+ k H++F R+G DL++ ++ Rabbit4Lib 220 QKITFHGEGdqEPGL---EPGDIIIVLDQKDHAVFTRRGEDLFMCMD 263 isftqAaLGgeveVPTLdG.kvkLkIPaG..TQsGtvfrLkGKGvpklnr i +++A +G + TLd + + ++ +G+ + G+ + + ++G+p r Rabbit4Lib 264 IQLVEALCGFQKPISTLDNrTIVITSHPGqiVKHGDIKCVLNEGMPIYRR 313 gsgrGDLyVhVkVetPkk..LseeQkeLLeela<-* + G L++++kV P+++ Ls+ LLe+l Rabbit4Lib 314 PYEKGRLIIEFKVNFPENgfLSPDKLSLLEKLL 346 // Query: Rabbit4Lib.748.C1 242 594 812 nseq=2; translated Scores for sequence family classification (score includes all domains): Model Description Score E-value N -------- ----------- ----- ------- --- [no hits above thresholds] Parsed for domains: Model Domain seq-f seq-t hmm-f hmm-t score E-value -------- ------- ----- ----- ----- ----- ----- ------- [no hits above thresholds] Alignments of top-scoring domains: [no hits above thresholds] // Query: Rabbit4Lib.750.C1 1010 1 886 nseq=2; translated Scores for sequence family classification (score includes all domains): Model Description Score E-value N -------- ----------- ----- ------- --- F5_F8_type_C F5/8 type C domain 116.7 4.3e-31 1 EGF EGF-like domain 68.8 1.1e-16 2 EGF_2 EGF-like domain 13.3 0.7 2 Parsed for domains: Model Domain seq-f seq-t hmm-f hmm-t score E-value -------- ------- ----- ----- ----- ----- ----- ------- EGF 1/2 43 76 .. 1 39 [] 40.1 4.9e-08 EGF_2 1/2 43 76 .. 1 37 [] 8.9 2.2 EGF 2/2 84 123 .. 1 39 [] 37.0 4.3e-07 EGF_2 2/2 89 123 .. 1 37 [] 12.5 0.87 F5_F8_type_C 1/1 142 280 .. 1 163 [] 116.7 4.3e-31 Alignments of top-scoring domains: EGF: domain 1 of 2, from 43 to 76: score 40.1, E = 4.9e-08 *->CspnngpCsngGtCvdtpg..gytCeCppGdyfllytGkrC<-* C++ C+ngGtC+++++ ++C Cp+G +tG C Rabbit4Lib 43 CDSS--QCLNGGTCLMGQDaaPFFCLCPEG-----FTGLVC 76 EGF_2: domain 1 of 2, from 43 to 76: score 8.9, E = 2.2 *->C....CngshGtCvspngtstpcgkCvCdsgyedkyqGadC<-* C++++C + +GtC g + + C C+ g ++G C Rabbit4Lib 43 CdssqCLN-GGTCL--MGQDAAPFFCLCPEG----FTGLVC 76 EGF: domain 2 of 2, from 84 to 123: score 37.0, E = 4.3e-07 *->CspnngpCsngGtCvdtpg........gytCeCppGdyfllytGkrC Cspn pC n+++C+ +++ ++++ ++y CeCp+G y G +C Rabbit4Lib 84 CSPN--PCYNNAECQVVGDahrgdvftHYICECPQG-----YMGTHC 123 <-* Rabbit4Lib - - EGF_2: domain 2 of 2, from 89 to 123: score 12.5, E = 0.87 *->C.....CngshGtCvspngtstpcgkCvCdsgyedkyqGadC<-* C ++ +C+ G ++ + ++ +C+C++g y G +C Rabbit4Lib 89 CynnaeCQV-VGDAHRGDV--FTHYICECPQG----YMGTHC 123 F5_F8_type_C: domain 1 of 1, from 142 to 280: score 116.7, E = 4.3e-31 *->qitaSseesgsggagrarLwspaaaalDGngntyghsvspstaWsse q+ + + g g +r w+p+ a+l+ g + +aW++ Rabbit4Lib 142 QLXCFIVHLGFLGLQR---WAPELARLHRTGIV--------NAWTA- 176 kwsggaknndapqwlqvDLgkpkkitgvvtqgrqdggn.gyvksYkiqyS ++ +d ++w+qv+L + + +tgvvtqg+ +g+ +yvk+ k+ yS Rabbit4Lib 177 SN------YDRKPWIQVNLLRKMWVTGVVTQGASRAGSaEYVKTLKVAYS 220 dDGseevnWttvkdgedilsdsgg.pkiF.gn.dnd.pvknlfdppikAR +DG + +++ + + ++g+++k+F dn++ ++nlf+ p +A+ Rabbit4Lib 221 LDG-R--KFQFIQE------ADGSgDKVFxRYvDNSgLKTNLFESPLEAQ 261 YvRivptswnggggiasraEl<-* YvR++p+++ + g+++r+El Rabbit4Lib 262 YVRLYPVTC--HRGCTLRMEL 280 // Query: Rabbit4Lib.750.C2 309 1 233 nseq=4; translated Scores for sequence family classification (score includes all domains): Model Description Score E-value N -------- ----------- ----- ------- --- F5_F8_type_C F5/8 type C domain 31.2 2.5e-05 1 Parsed for domains: Model Domain seq-f seq-t hmm-f hmm-t score E-value -------- ------- ----- ----- ----- ----- ----- ------- F5_F8_type_C 1/1 1 77 [. 1 163 [] 31.2 2.5e-05 Alignments of top-scoring domains: F5_F8_type_C: domain 1 of 1, from 1 to 77: score 31.2, E = 2.5e-05 *->qitaSseesgsggagrarLwspaaaalDGngntyghsvspstaWsse Rabbit4Lib - ----------------------------------------------- - kwsggaknndapqwlqvDLgkpkkitgvvtqgrqdggn.gyvksYkiqyS k++tgv+tqg++d+g+ +yv +Yk+ S Rabbit4Lib 1 ---------------------XKRVTGVITQGARDFGHiQYVAAYKVAHS 29 dDGseevnWttvkdgedilsdsgg.pkiF.gn.dnd.pvknlfdppikAR +DG + nWt++k+ ++ + k+F+gn dn +++kn+f++p+ AR Rabbit4Lib 30 NDG-R--NWTEYKE------QGATdSKVFpGNlDNYsHKKNVFETPVLAR 70 YvRivptswnggggiasraEl<-* +vRi p + Rabbit4Lib 71 FVRILP--------------V 77 // Query: Rabbit4Lib.753.C1 779 88 579 nseq=6; minus strand; translated Scores for sequence family classification (score includes all domains): Model Description Score E-value N -------- ----------- ----- ------- --- Skp1 Skp1 family, dimerisation domain 199.6 4.8e-56 1 Skp1_POZ Skp1 family, tetramerisation domain 132.0 1.1e-35 1 Parsed for domains: Model Domain seq-f seq-t hmm-f hmm-t score E-value -------- ------- ----- ----- ----- ----- ----- ------- Skp1_POZ 1/1 2 67 .. 1 74 [] 132.0 1.1e-35 Skp1 1/1 85 162 .. 1 83 [] 199.6 4.8e-56 Alignments of top-scoring domains: Skp1_POZ: domain 1 of 1, from 2 to 67: score 132.0, E = 1.1e-35 *->kliKLtSsDgeeFeverevakqSktikdmiedlGvddenantetsia ++iKL+SsDge+Fev+ e+akqS+tik+m+edlG+dde+ Rabbit4Lib 2 PSIKLQSSDGEIFEVDVEIAKQSVTIKTMLEDLGMDDEG-------- 40 erdpiplpnVtskILeKVIEWCkhHke<-* + dp+plpnV++ IL+KVI+WC+hHk+ Rabbit4Lib 41 DDDPVPLPNVNAAILKKVIQWCTHHKD 67 Skp1: domain 1 of 1, from 85 to 162: score 199.6, E = 4.8e-56 *->ipeWDaeFlkvdqetLFdLIlAANyLdikGLLdvgCktVAdmiKGKt ip WD+eFlkvdq+tLF+LIlAANyLdikGLLdv+CktVA+miKGKt Rabbit4Lib 85 IPVWDQEFLKVDQGTLFELILAANYLDIKGLLDVTCKTVANMIKGKT 131 PeEiReiFgIenDftpEEEedslEeairkenawaee<-* PeEiR++F+I+nDft+EE E+++rken+w+ee Rabbit4Lib 132 PEEIRKTFNIKNDFTEEE-----EAQVRKENQWCEE 162 // Query: Rabbit4Lib.755.C1 512 1 447 nseq=4; minus strand; translated Scores for sequence family classification (score includes all domains): Model Description Score E-value N -------- ----------- ----- ------- --- MAPEG MAPEG family 11.8 0.0012 1 Parsed for domains: Model Domain seq-f seq-t hmm-f hmm-t score E-value -------- ------- ----- ----- ----- ----- ----- ------- MAPEG 1/1 40 149 .] 1 155 [] 11.8 0.0012 Alignments of top-scoring domains: MAPEG: domain 1 of 1, from 40 to 149: score 11.8, E = 0.0012 *->geyalvAlvtllsvlvnayfainVgrARkryrvkpPantgDlFFKNL ++ a+ A++t ++ ++ +++ ++ +A r k++an++D Rabbit4Lib 40 ENEAFMAFATYATIILLKMMFMSSATAFYRMTRKAFANPEDS----- 81 EVQFDLrqeveeedkkdpeFERvlRAhqNtlEnyppFLilLwvaGlyfpn F + + d +ERv+RAh N+lEn++pFL+ +++++l +p+ Rabbit4Lib 82 -ASFGKGENAKKFLRADDRVERVRRAHLNDLENIVPFLGIGLLYSLSGPD 130 laaAlgGFlvylvgRvlYflGYAlyataapkRrlgfalgslilllLllla l +A+++F+++ +R+ Y Rabbit4Lib 131 LSTAILHFRLFVGARI-----Y---------------------------- 147 llgilvhl<-* h Rabbit4Lib 148 ------HT 149 // Query: Rabbit4Lib.756.C1 482 1 526 nseq=2; minus strand; translated Scores for sequence family classification (score includes all domains): Model Description Score E-value N -------- ----------- ----- ------- --- Phospholip_A2_1 Phospholipase A2 155.7 8.2e-43 1 Parsed for domains: Model Domain seq-f seq-t hmm-f hmm-t score E-value -------- ------- ----- ----- ----- ----- ----- ------- Phospholip_A2_1 1/1 55 176 .] 1 127 [] 155.7 8.2e-43 Alignments of top-scoring domains: Phospholip_A2_1: domain 1 of 1, from 55 to 176: score 155.7, E = 8.2e-43 *->NLvQFgnMIqcatkgkrpvlsYadYGCYCGwGGsGtPvDalDRCCfv NL++F++MI+ +t gk+p++ Y++YGCYCG GG GtP Da+DRCC + Rabbit4Lib 55 NLLNFRKMIKFTT-GKEPSTTYGFYGCYCGLGGTGTPLDATDRCCAT 100 HDcCYgeaeKitgCnPklttYsYscsngditCgknteCerfVCeCDraAA HDcCY ++e+ +gC +kl Y Ys s+++itC++ + C A+ Rabbit4Lib 101 HDCCYTRLEN-SGCGTKLLNYHYSLSGNTITCEDTDYCXES-------AV 142 .......iCFarnlpnTYNkkywaYpsnicteeserC<-* + ++++ CFa+n nTYNkky +Y+++ c++ ++ Rabbit4Lib 143 smrqdrcLCFAANQ-NTYNKKYEYYSNSRCSQVKQ-- 176 // Query: Rabbit4Lib.758.C1 182 1327 1413 nseq=2; translated Scores for sequence family classification (score includes all domains): Model Description Score E-value N -------- ----------- ----- ------- --- [no hits above thresholds] Parsed for domains: Model Domain seq-f seq-t hmm-f hmm-t score E-value -------- ------- ----- ----- ----- ----- ----- ------- [no hits above thresholds] Alignments of top-scoring domains: [no hits above thresholds] // Query: Rabbit4Lib.759.C1 643 1 620 nseq=2; minus strand; translated Scores for sequence family classification (score includes all domains): Model Description Score E-value N -------- ----------- ----- ------- --- DDOST_48kD Dolichyl-diphosphooligosaccharide-protein 18.4 9.7e-14 1 Parsed for domains: Model Domain seq-f seq-t hmm-f hmm-t score E-value -------- ------- ----- ----- ----- ----- ----- ------- DDOST_48kD 1/1 1 207 [] 1 464 [] 18.4 9.7e-14 Alignments of top-scoring domains: DDOST_48kD: domain 1 of 1, from 1 to 207: score 18.4, E = 9.7e-14 *->awlafcllLaligavltqaaRtLVLldnSlavretySvFLkSLkdRg Rabbit4Lib 1 ---------------------------X------------------- 1 FkLtykdadDsSlkLfkYGKEerLYDNlIifspKgvkslGgqisvksLsk + Rabbit4Lib 2 --------------------------------T----------------- 2 FvdsGGNvLVaASPsaigdalRElgsElGieldEegtvViDHfnydesLD Rabbit4Lib 3 -----------------------------------------------L-- 3 sGdhTtilvvsdnlleapyIvgkskrqaaaePiLFkGiGlvagknNplvl r Nplvl Rabbit4Lib 4 -------------------------R-------------------NPLVL 9 pILrAssTSYsYnpKTeAevskNPwaaGsqtlLVagLQsrNNARvvfsGS +IL + SYs++p +++++++P+a+G++tlL+agLQ+rNNARv+fsGS Rabbit4Lib 10 DILXGLLSSYSFFP--DKPITQYPHAVGKNTLLIAGLQARNNARVIFSGS 57 ldflsdeffsqavqsaspSvqr.aqsGNqefAkaLtkWVFkEkGVLrvtn ldf+sd ff++avq+a p+ + GN+e+A+aL++WVFkE+GVLrv++ Rabbit4Lib 58 LDFFSDAFFNSAVQKATPGXPEvSTEGNYELAVALSRWVFKEEGVLRVGP 107 vtHhkvgEtlppeeASpYtItDeViYSIgIseLenGeWvPfvAdDiQLEl v+ gEt+pp++ Yt+tD+V+YSI+I++L vPf++dDiQLE+ Rabbit4Lib 108 VSIIEXGETSPPNA---YTVTDLVEYSIVIEQLRMAGGVPFDGDDIQLEF 154 vriDPfvRttLkpsgsDSeTsgkysaeFklPDvyGVFtFkvDYrRvGyTh vriD L+ + ++FklPDvyGVF+FkvDY+R+GyTh Rabbit4Lib 155 VRID------LSEDLPEEXKVANTAVQFKLPDVYGVFQFKVDYNRLGYTH 198 lydktqvsvRpLaHtqYeRSWFIpsAYPYYASaFsvmvglllFsivFLht ly++tqvs Rabbit4Lib 199 LYSSTQVS------------------------------------------ 206 KdapvKGAkvleseKKkN<-* v Rabbit4Lib 207 ----V------------- 207 // Query: Rabbit4Lib.763.C1 331 107 395 nseq=4; minus strand; translated Scores for sequence family classification (score includes all domains): Model Description Score E-value N -------- ----------- ----- ------- --- L51_S25_CI-B8 Mitochondrial ribosomal protein L51 / S 61.2 2.3e-14 1 Parsed for domains: Model Domain seq-f seq-t hmm-f hmm-t score E-value -------- ------- ----- ----- ----- ----- ----- ------- L51_S25_CI-B8 1/1 1 65 [. 1 83 [] 61.2 2.3e-14 Alignments of top-scoring domains: L51_S25_CI-B8: domain 1 of 1, from 1 to 65: score 61.2, E = 2.3e-14 *->qnggssaGaRkFwennLptlkfkNPavpilvrrIyirnddKasgvpP R+F+e+++++lk++NP++pil+r+ +s v+P Rabbit4Lib 1 ---------RDFIEKRYVELKKANPDLPILIRE--------CSDVQP 30 klrayyndGrevkvidlrnlsreeIlkellkllgst<-* kl+a+y++G+e k ++l+n s++++ ++l+++ + Rabbit4Lib 31 KLWARYAFGQE-KNVSLNNFSADQVTRALENVQVAR 65 // Query: Rabbit4Lib.769.C1 286 1 247 nseq=2; minus strand; translated Scores for sequence family classification (score includes all domains): Model Description Score E-value N -------- ----------- ----- ------- --- [no hits above thresholds] Parsed for domains: Model Domain seq-f seq-t hmm-f hmm-t score E-value -------- ------- ----- ----- ----- ----- ----- ------- [no hits above thresholds] Alignments of top-scoring domains: [no hits above thresholds] // Query: Rabbit4Lib.771.C1 146 73 232 nseq=2; translated Scores for sequence family classification (score includes all domains): Model Description Score E-value N -------- ----------- ----- ------- --- [no hits above thresholds] Parsed for domains: Model Domain seq-f seq-t hmm-f hmm-t score E-value -------- ------- ----- ----- ----- ----- ----- ------- [no hits above thresholds] Alignments of top-scoring domains: [no hits above thresholds] // Query: Rabbit4Lib.772.C1 957 1 805 nseq=2; minus strand; translated Scores for sequence family classification (score includes all domains): Model Description Score E-value N -------- ----------- ----- ------- --- Ribosomal_L10 Ribosomal protein L10 173.8 2.8e-48 1 Parsed for domains: Model Domain seq-f seq-t hmm-f hmm-t score E-value -------- ------- ----- ----- ----- ----- ----- ------- Ribosomal_L10 1/1 32 134 .. 1 106 [] 173.8 2.8e-48 Alignments of top-scoring domains: Ribosomal_L10: domain 1 of 1, from 32 to 134: score 173.8, E = 2.8e-48 *->mkaewKaeeVaeLkellkeyksvvIvdydGvpsaQLqeiRkkLRgka ++a+wK +++ ++ +ll++y++++Iv++d+v+s+Q+q iR +LRgka Rabbit4Lib 32 DRATWKSNYFLKIIQLLDDYPKCFIVGADNVGSKQMQQIRMSLRGKA 78 vvlKvgKNTLirRAlkgageetpndelekledyltGntaiiftkedpfel vvl +gKNT++r+A++g++e++p+ lekl++++ Gn++++ftked++e+ Rabbit4Lib 79 VVL-MGKNTMMRKAIRGHLENNPA--LEKLLPHIRGNVGFVFTKEDLTEI 125 akvledfkk<-* +++l++++ Rabbit4Lib 126 RDMLLANRC 134 // Query: Rabbit4Lib.772.C2 1384 1 1038 nseq=36; minus strand; translated Scores for sequence family classification (score includes all domains): Model Description Score E-value N -------- ----------- ----- ------- --- Ribosomal_L10 Ribosomal protein L10 173.8 2.8e-48 1 Ribosomal_60s 60s Acidic ribosomal protein 62.8 7.2e-15 1 Parsed for domains: Model Domain seq-f seq-t hmm-f hmm-t score E-value -------- ------- ----- ----- ----- ----- ----- ------- Ribosomal_L10 1/1 33 135 .. 1 106 [] 173.8 2.8e-48 Ribosomal_60s 1/1 233 345 .. 1 94 [] 62.8 7.2e-15 Alignments of top-scoring domains: Ribosomal_L10: domain 1 of 1, from 33 to 135: score 173.8, E = 2.8e-48 *->mkaewKaeeVaeLkellkeyksvvIvdydGvpsaQLqeiRkkLRgka ++a+wK +++ ++ +ll++y++++Iv++d+v+s+Q+q iR +LRgka Rabbit4Lib 33 DRATWKSNYFLKIIQLLDDYPKCFIVGADNVGSKQMQQIRMSLRGKA 79 vvlKvgKNTLirRAlkgageetpndelekledyltGntaiiftkedpfel vvl +gKNT++r+A++g++e++p+ lekl++++ Gn++++ftked++e+ Rabbit4Lib 80 VVL-MGKNTMMRKAIRGHLENNPA--LEKLLPHIRGNVGFVFTKEDLTEI 126 akvledfkk<-* +++l++++ Rabbit4Lib 127 RDMLLANRC 135 Ribosomal_60s: domain 1 of 1, from 233 to 345: score 62.8, E = 7.2e-15 *->eitaadi........kailkaAgvnvd...........avrvkllaa it+++++++ ++ ++++ + ++ ++++ +++ ++++ +la Rabbit4Lib 233 DITEDTLhsrflegvRNVCQCVSADWLsdrgilphsiiNGYKRVLAL 279 alegkdikeliangsakgvavpaaaAaAaaAaAaaAAagAaaaaEEkKeE ++e+ + l+++++a++++++a++AaA++AaA AA +Aaaaa++k e+ Rabbit4Lib 280 SVETEYTFPLAEKVKAFLADPSAFVAAAPVAAASTAAPAAAAAAPAKVEA 329 eeEeEEsDDDMGFGLF<-* +eE+EEs+ GFGLF Rabbit4Lib 330 KEESEESEKIXGFGLF 345 // Query: Rabbit4Lib.773.C1 571 37 636 nseq=3; minus strand; translated Scores for sequence family classification (score includes all domains): Model Description Score E-value N -------- ----------- ----- ------- --- VQ VQ motif -1.3 4.5 1 Parsed for domains: Model Domain seq-f seq-t hmm-f hmm-t score E-value -------- ------- ----- ----- ----- ----- ----- ------- VQ 1/1 158 186 .. 1 31 [] -1.3 4.5 Alignments of top-scoring domains: VQ: domain 1 of 1, from 158 to 186: score -1.3, E = 4.5 *->yiapptvintdpsnFRalVQrLTGapsdvas<-* ++++v++tdp++ lVQ+L ++ +++ Rabbit4Lib 158 GDHNTKVLQTDPATLLHLVQQL--EQALEEM 186 // Query: Rabbit4Lib.776.C1 347 92 352 nseq=2; minus strand; translated Scores for sequence family classification (score includes all domains): Model Description Score E-value N -------- ----------- ----- ------- --- BolA BolA-like protein 68.7 1.3e-16 1 Parsed for domains: Model Domain seq-f seq-t hmm-f hmm-t score E-value -------- ------- ----- ----- ----- ----- ----- ------- BolA 1/1 3 80 .. 1 87 [] 68.7 1.3e-16 Alignments of top-scoring domains: BolA: domain 1 of 1, from 3 to 80: score 68.7, E = 1.3e-16 *->kleeqilqpvilevlPneshvhvvdlsgkGvddGcesHFkvviVSde ++ l+++++ l + hv+v d c+++F+v +VS + Rabbit4Lib 3 LSSHY-LREKLQRDL-EAEHVEVEDTTLN----RCATSFRVLVVSTK 43 FeGkSrVkRHRlVYglLkdeLasggiHALaiktkyTpeEW<-* FeGk +++RHRlV+ +L++eL + iHA+ +kt +Tpe W Rabbit4Lib 44 FEGKPLLQRHRLVNECLAEELPH--IHAFEQKT-LTPEQW 80 // Query: Rabbit4Lib.780.C1 692 1 764 nseq=2; minus strand; translated Scores for sequence family classification (score includes all domains): Model Description Score E-value N -------- ----------- ----- ------- --- Mito_carr Mitochondrial carrier protein 210.2 3e-59 3 Parsed for domains: Model Domain seq-f seq-t hmm-f hmm-t score E-value -------- ------- ----- ----- ----- ----- ----- ------- Mito_carr 1/3 3 59 .. 1 100 [] 33.6 4.4e-06 Mito_carr 2/3 68 162 .. 1 100 [] 116.3 5.9e-31 Mito_carr 3/3 165 253 .. 1 100 [] 67.7 2.5e-16 Alignments of top-scoring domains: Mito_carr: domain 1 of 3, from 3 to 59: score 33.6, E = 4.4e-06 *->sflksllaGgiAGaiaatvtyPlDvvKtRLQstqgadassaaggssk + Q Rabbit4Lib 3 RPK---------------------------Q---------------- 6 YkgildcfkkiykeEGirgLYkGlgpnllrvaPyaaiyFgtYEtlKklll Ykgi+dc+++i ke+G++++++G+++n++r++P +a++F++ +++K+++l Rabbit4Lib 7 YKGIIDCVVRIPKEQGVLSFWRGNLANVIRYFPTQALNFAFKDKYKQIFL 56 kkl<-* + Rabbit4Lib 57 GGV 59 Mito_carr: domain 2 of 3, from 68 to 162: score 116.3, E = 5.9e-31 *->sflksllaGgiAGaiaatvtyPlDvvKtRLQstqgadassaaggssk +f+ +l++Gg+AGa++ +++yPlD+++tRL +++ag+ ++ Rabbit4Lib 68 YFAGNLASGGAAGATSLCFVYPLDFARTRLA-----ADVGKAGAERE 109 YkgildcfkkiykeEGirgLYkGlgpnllrvaPyaaiyFgtYEtlKklll ++g+ dc++kiyk++GirgLY G+ +++ ++++y+a+yFg+Y+t+K +l Rabbit4Lib 110 FRGLGDCLVKIYKSDGIRGLYQGFNVSVQGIIIYRAAYFGIYDTAKGMLP 159 kkl<-* + + Rabbit4Lib 160 DPK 162 Mito_carr: domain 3 of 3, from 165 to 253: score 67.7, E = 2.5e-16 *->sflksllaGgiAGaiaatvtyPlDvvKtRLQstqgadassaaggssk +++ s + + a+a + yP+D+v+ R++ ++s+ +g + Rabbit4Lib 165 HIFISWMIAQSVTAVAGLTSYPFDTVRRRMM-----MQSGRKGTDIM 206 YkgildcfkkiykeEGirgLYkGlgpnllrvaPyaaiyFgtYEtlKklll Y+g+ldc +ki + EG ++++kG + n+lr + +a + ++ Y+ +Kk Rabbit4Lib 207 YTGTLDCWRKIARDEGGKAFFKGAWSNVLRGMGGAFV-LVLYDEIKK--- 252 kkl<-* + Rabbit4Lib 253 --F 253 // Query: Rabbit4Lib.782.C1 171 169 408 nseq=2; translated Scores for sequence family classification (score includes all domains): Model Description Score E-value N -------- ----------- ----- ------- --- [no hits above thresholds] Parsed for domains: Model Domain seq-f seq-t hmm-f hmm-t score E-value -------- ------- ----- ----- ----- ----- ----- ------- [no hits above thresholds] Alignments of top-scoring domains: [no hits above thresholds] // Query: Rabbit4Lib.784.C1 203 451 552 nseq=2; translated Scores for sequence family classification (score includes all domains): Model Description Score E-value N -------- ----------- ----- ------- --- [no hits above thresholds] Parsed for domains: Model Domain seq-f seq-t hmm-f hmm-t score E-value -------- ------- ----- ----- ----- ----- ----- ------- [no hits above thresholds] Alignments of top-scoring domains: [no hits above thresholds] // Query: Rabbit4Lib.787.C1 100 562 722 nseq=3; translated Scores for sequence family classification (score includes all domains): Model Description Score E-value N -------- ----------- ----- ------- --- [no hits above thresholds] Parsed for domains: Model Domain seq-f seq-t hmm-f hmm-t score E-value -------- ------- ----- ----- ----- ----- ----- ------- [no hits above thresholds] Alignments of top-scoring domains: [no hits above thresholds] // Query: Rabbit4Lib.788.C1 201 1 223 nseq=2; minus strand; translated Scores for sequence family classification (score includes all domains): Model Description Score E-value N -------- ----------- ----- ------- --- DSS1_SEM1 DSS1/SEM1 family 119.5 6.1e-32 1 Parsed for domains: Model Domain seq-f seq-t hmm-f hmm-t score E-value -------- ------- ----- ----- ----- ----- ----- ------- DSS1_SEM1 1/1 6 66 .. 1 70 [] 119.5 6.1e-32 Alignments of top-scoring domains: DSS1_SEM1: domain 1 of 1, from 6 to 66: score 119.5, E = 6.1e-32 *->akaeevdldlLEeDDEFEeFpiedGweWaekdtikdnadedtnvWEd +++ dl+lLEeDDEFEeFp+ed Wa++d+ ded++vWEd Rabbit4Lib 6 REKAAGDLGLLEEDDEFEEFPAED---WAGLDE-----DEDAHVWED 44 NWDDddVeDDDFSnQLrAELekk<-* NWDDd+VeDD FSnQLrAELek+ Rabbit4Lib 45 NWDDDNVEDD-FSNQLRAELEKH 66 // Query: Rabbit4Lib.794.C1 608 72 325 nseq=2; minus strand; translated Scores for sequence family classification (score includes all domains): Model Description Score E-value N -------- ----------- ----- ------- --- Ribosomal_L38e Ribosomal L38e protein family 179.7 4.6e-50 1 Parsed for domains: Model Domain seq-f seq-t hmm-f hmm-t score E-value -------- ------- ----- ----- ----- ----- ----- ------- Ribosomal_L38e 1/1 2 69 .. 1 77 [] 179.7 4.6e-50 Alignments of top-scoring domains: Ribosomal_L38e: domain 1 of 1, from 2 to 69: score 179.7, E = 4.6e-50 *->PrqIteIKdFLllARRkDAksvkvKkNkdknkaGkPfrnVKFKVRCS Pr+I+eIKdFLl+ARRkDAksvk+KkNkd nVKFKVRCS Rabbit4Lib 2 PRKIEEIKDFLLTARRKDAKSVKIKKNKD---------NVKFKVRCS 39 rYLYTLVvnDaeKAeKLkQSLPPgLkVkeL<-* rYLYTLV++D+eKAeKLkQSLPPgL+VkeL Rabbit4Lib 40 RYLYTLVITDKEKAEKLKQSLPPGLAVKEL 69 // Query: Rabbit4Lib.794.C2 333 1 165 nseq=2; minus strand; translated Scores for sequence family classification (score includes all domains): Model Description Score E-value N -------- ----------- ----- ------- --- Ribosomal_L38e Ribosomal L38e protein family 101.1 2.2e-26 1 Parsed for domains: Model Domain seq-f seq-t hmm-f hmm-t score E-value -------- ------- ----- ----- ----- ----- ----- ------- Ribosomal_L38e 1/1 1 53 [. 1 77 [] 101.1 2.2e-26 Alignments of top-scoring domains: Ribosomal_L38e: domain 1 of 1, from 1 to 53: score 101.1, E = 2.2e-26 *->PrqIteIKdFLllARRkDAksvkvKkNkdknkaGkPfrnVKFKVRCS Pr ksvk+KkNkd nVKFKVRCS Rabbit4Lib 1 PRV---------------RKSVKIKKNKD---------NVKFKVRCS 23 rYLYTLVvnDaeKAeKLkQSLPPgLkVkeL<-* rYLYTLV++D+eKAeKLkQSLPPgL+VkeL Rabbit4Lib 24 RYLYTLVITDKEKAEKLKQSLPPGLAVKEL 53 // Query: Rabbit4Lib.798.C1 348 1 288 nseq=2; minus strand; translated Scores for sequence family classification (score includes all domains): Model Description Score E-value N -------- ----------- ----- ------- --- TMS_TDE TMS membrane protein/tumour differentially e -283.6 0.22 1 Parsed for domains: Model Domain seq-f seq-t hmm-f hmm-t score E-value -------- ------- ----- ----- ----- ----- ----- ------- TMS_TDE 1/1 2 94 .. 1 485 [] -283.6 0.22 Alignments of top-scoring domains: TMS_TDE: domain 1 of 1, from 2 to 94: score -283.6, E = 0.22 *->ACCcGsaaCaLcCrtcPSgknSrsGTRlmYAllLllgtivswVmlsP r+ + Rabbit4Lib 2 ----------------------RV--------------------R-- 4 gvqkqleklpwfCegftklekyGALsAvsGGsagvpCeelvGYkAVYRVC Rabbit4Lib - -------------------------------------------------- - fGlAcFFllLsLlmiGVKSskDpRaaIhNGFWffKflllfaliigaFFIP + Rabbit4Lib 5 -------------------------------------------------G 5 nqetfitvwmyVGmvGaffFILvQLvLlVDFAHgWaEtWvekvEseDEnS + E Rabbit4Lib 6 D-----------------------------------------EE------ 8 rfWYaaLlvvTllmYlaslvalvllfvyfThsGddCglNkffiivnlilc + Rabbit4Lib 9 ------------------------------DG------------------ 10 vaiSvlSisPkVQErnPrSGLLQsSvISvYctYLTwSAlaSePdekeCNP Q P Rabbit4Lib 11 ------------Q-----------------------------P------- 12 GmFellsnvtkavstgLGSLFTFiAiAavtkddafrsafqvtntiGLlll + Rabbit4Lib 13 --------------R----------------------------------- 13 llCivYssirassrtqlrkltdksdneEkellesalsdtedgtDseegkk Rabbit4Lib - -------------------------------------------------- - eeeGPRvvDdEkkGVtYSYSfFHfiFfLASLYvMMtLTsWytyddssiel ++ +D+Ek+GV YSYSfFH++++LASLY+MMtLTsWy +d + Rabbit4Lib 14 RA-----IDNEKEGVQYSYSFFHLMLCLASLYIMMTLTSWYSPD-AKFQN 57 fnvrnwasvWVKivSSWicvgLYgWTLVAPiilPdReF<-* + + nw++vWVKi SSW c+ LY+WTLVAPi l++R+F Rabbit4Lib 58 VTS-NWPAVWVKIISSWVCLILYVWTLVAPIFLTNRDF 94 // Query: Rabbit4Lib.799.C1 198 1 373 nseq=2; minus strand; translated Scores for sequence family classification (score includes all domains): Model Description Score E-value N -------- ----------- ----- ------- --- [no hits above thresholds] Parsed for domains: Model Domain seq-f seq-t hmm-f hmm-t score E-value -------- ------- ----- ----- ----- ----- ----- ------- [no hits above thresholds] Alignments of top-scoring domains: [no hits above thresholds] // Query: Rabbit4Lib.804.C1 515 101 346 nseq=2; minus strand; translated Scores for sequence family classification (score includes all domains): Model Description Score E-value N -------- ----------- ----- ------- --- Ribosomal_60s 60s Acidic ribosomal protein -10.7 0.46 1 Parsed for domains: Model Domain seq-f seq-t hmm-f hmm-t score E-value -------- ------- ----- ----- ----- ----- ----- ------- Ribosomal_60s 1/1 22 69 .. 1 94 [] -10.7 0.46 Alignments of top-scoring domains: Ribosomal_60s: domain 1 of 1, from 22 to 69: score -10.7, E = 0.46 *->eitaadikailkaAgvnvdavrvkllaaalegkdikeliangsakgv ++t+++i+a++kaAgvnv++++++l+a+al++++i li+n++ ++ Rabbit4Lib 22 TVTEDKINALIKAAGVNVEPFWPGLFAKALANVNIGSLICNVGPGA- 67 avpaaaAaAaaAaAaaAAagAaaaaEEkKeEeeEeEEsDDDMGFGLF<-* L Rabbit4Lib 68 ---------------------------------------------LL 69 // Query: Rabbit4Lib.805.C1 1180 1 792 nseq=2; minus strand; translated Scores for sequence family classification (score includes all domains): Model Description Score E-value N -------- ----------- ----- ------- --- [no hits above thresholds] Parsed for domains: Model Domain seq-f seq-t hmm-f hmm-t score E-value -------- ------- ----- ----- ----- ----- ----- ------- [no hits above thresholds] Alignments of top-scoring domains: [no hits above thresholds] // Query: Rabbit4Lib.806.C1 395 1 250 nseq=2; minus strand; translated Scores for sequence family classification (score includes all domains): Model Description Score E-value N -------- ----------- ----- ------- --- Thioredoxin Thioredoxin 11.6 9.6e-06 1 Parsed for domains: Model Domain seq-f seq-t hmm-f hmm-t score E-value -------- ------- ----- ----- ----- ----- ----- ------- Thioredoxin 1/1 2 63 .. 1 114 [] 11.6 9.6e-06 Alignments of top-scoring domains: Thioredoxin: domain 1 of 1, from 2 to 63: score 11.6, E = 9.6e-06 *->vvvvltdenFdeevlkaksdkpVLVdFyApWCGpCKmlAPeyeklAq +a Rabbit4Lib 2 ---------------HA------------------------------ 3 eykgesddvkfaKVDaDenpkdlAskygVrgfPTlkffknGkk.epvdyv ++ ++++aK+Da+ d++s y+VrgfPT++f +++kk +p++y+ Rabbit4Lib 4 --SA---NIVIAKMDAT-AN-DVPSPYEVRGFPTIYFSPANKKlSPKKYE 46 gGArtkddLvafikkhlg<-* gG r+++d++++++++++ Rabbit4Lib 47 GG-RELSDFISYLQREAT 63 // Query: Rabbit4Lib.807.C1 1473 1 1324 nseq=5; minus strand; translated Scores for sequence family classification (score includes all domains): Model Description Score E-value N -------- ----------- ----- ------- --- RRM_1 RNA recognition motif. (a.k.a. RRM, RBD, or 14.4 0.0056 1 Parsed for domains: Model Domain seq-f seq-t hmm-f hmm-t score E-value -------- ------- ----- ----- ----- ----- ----- ------- RRM_1 1/1 109 177 .. 1 74 [] 14.4 0.0056 Alignments of top-scoring domains: RRM_1: domain 1 of 1, from 109 to 177: score 14.4, E = 0.0056 *->lfVgNL.ppdtteedLkdlFskfGpiesikivrDttretgrskGfaF + +NL++ +++++ + +l +++G+i++ ++r k aF Rabbit4Lib 109 IHLSNLpHSGYSDSAVLKLAEPYGKIKNYILMRM--------KSQAF 147 VeFedeedAekAld.alnG.kelggrelrv<-* +e+e+ edA + +d++l + + gr ++v Rabbit4Lib 148 IEMETREDAMAMVDhCLKKaLWFQGRCVKV 177 // Query: Rabbit4Lib.809.C2 460 1 474 nseq=4; minus strand; translated Scores for sequence family classification (score includes all domains): Model Description Score E-value N -------- ----------- ----- ------- --- zf-CCHC Zinc knuckle 158.5 1.2e-43 6 Keratin_B2 Keratin, high sulfur B2 protein -88.3 7.7 1 Parsed for domains: Model Domain seq-f seq-t hmm-f hmm-t score E-value -------- ------- ----- ----- ----- ----- ----- ------- zf-CCHC 1/6 32 49 .. 1 18 [] 29.4 8.5e-05 zf-CCHC 2/6 52 69 .. 1 18 [] 32.5 1e-05 zf-CCHC 3/6 76 93 .. 1 18 [] 33.7 4.1e-06 zf-CCHC 4/6 97 114 .. 1 18 [] 32.6 9e-06 zf-CCHC 5/6 115 132 .. 1 18 [] 30.5 4e-05 zf-CCHC 6/6 136 153 .. 1 18 [] 33.2 6.1e-06 Keratin_B2 1/1 30 155 .. 1 177 [] -88.3 7.7 Alignments of top-scoring domains: zf-CCHC: domain 1 of 6, from 32 to 49: score 29.4, E = 8.5e-05 *->rkCynCGkpGHiardCpe<-* Cy+CG+ GH+a+dC Rabbit4Lib 32 DICYRCGESGHLAKDCDL 49 zf-CCHC: domain 2 of 6, from 52 to 69: score 32.5, E = 1e-05 *->rkCynCGkpGHiardCpe<-* CynCG+ GHia+dC+e Rabbit4Lib 52 DACYNCGRGGHIAKDCKE 69 zf-CCHC: domain 3 of 6, from 76 to 93: score 33.7, E = 4.1e-06 *->rkCynCGkpGHiardCpe<-* + CynCGkpGH+ardC + Rabbit4Lib 76 QCCYNCGKPGHLARDCDH 93 zf-CCHC: domain 4 of 6, from 97 to 114: score 32.6, E = 9e-06 *->rkCynCGkpGHiardCpe<-* +kCy CG+ GHi++dC++ Rabbit4Lib 97 QKCYSCGEFGHIQKDCTK 114 zf-CCHC: domain 5 of 6, from 115 to 132: score 30.5, E = 4e-05 *->rkCynCGkpGHiardCpe<-* +kCy+CG++GH+a +C + Rabbit4Lib 115 VKCYRCGETGHVAINCSK 132 [output cut off at A = 5 top alignments] // Query: Rabbit4Lib.809.C3 581 59 702 nseq=4; minus strand; translated Scores for sequence family classification (score includes all domains): Model Description Score E-value N -------- ----------- ----- ------- --- zf-CCHC Zinc knuckle 158.5 1.2e-43 6 Keratin_B2 Keratin, high sulfur B2 protein -88.3 7.7 1 Parsed for domains: Model Domain seq-f seq-t hmm-f hmm-t score E-value -------- ------- ----- ----- ----- ----- ----- ------- zf-CCHC 1/6 88 105 .. 1 18 [] 29.4 8.5e-05 zf-CCHC 2/6 108 125 .. 1 18 [] 32.5 1e-05 zf-CCHC 3/6 132 149 .. 1 18 [] 33.7 4.1e-06 zf-CCHC 4/6 153 170 .. 1 18 [] 32.6 9e-06 zf-CCHC 5/6 171 188 .. 1 18 [] 30.5 4e-05 zf-CCHC 6/6 192 209 .. 1 18 [] 33.2 6.1e-06 Keratin_B2 1/1 86 211 .. 1 177 [] -88.3 7.7 Alignments of top-scoring domains: zf-CCHC: domain 1 of 6, from 88 to 105: score 29.4, E = 8.5e-05 *->rkCynCGkpGHiardCpe<-* Cy+CG+ GH+a+dC Rabbit4Lib 88 DICYRCGESGHLAKDCDL 105 zf-CCHC: domain 2 of 6, from 108 to 125: score 32.5, E = 1e-05 *->rkCynCGkpGHiardCpe<-* CynCG+ GHia+dC+e Rabbit4Lib 108 DACYNCGRGGHIAKDCKE 125 zf-CCHC: domain 3 of 6, from 132 to 149: score 33.7, E = 4.1e-06 *->rkCynCGkpGHiardCpe<-* + CynCGkpGH+ardC + Rabbit4Lib 132 QCCYNCGKPGHLARDCDH 149 zf-CCHC: domain 4 of 6, from 153 to 170: score 32.6, E = 9e-06 *->rkCynCGkpGHiardCpe<-* +kCy CG+ GHi++dC++ Rabbit4Lib 153 QKCYSCGEFGHIQKDCTK 170 zf-CCHC: domain 5 of 6, from 171 to 188: score 30.5, E = 4e-05 *->rkCynCGkpGHiardCpe<-* +kCy+CG++GH+a +C + Rabbit4Lib 171 VKCYRCGETGHVAINCSK 188 [output cut off at A = 5 top alignments] // Query: Rabbit4Lib.816.C1 138 320 417 nseq=2; minus strand; translated Scores for sequence family classification (score includes all domains): Model Description Score E-value N -------- ----------- ----- ------- --- [no hits above thresholds] Parsed for domains: Model Domain seq-f seq-t hmm-f hmm-t score E-value -------- ------- ----- ----- ----- ----- ----- ------- [no hits above thresholds] Alignments of top-scoring domains: [no hits above thresholds] // Query: Rabbit4Lib.817.C1 203 1 286 nseq=2; minus strand; translated Scores for sequence family classification (score includes all domains): Model Description Score E-value N -------- ----------- ----- ------- --- [no hits above thresholds] Parsed for domains: Model Domain seq-f seq-t hmm-f hmm-t score E-value -------- ------- ----- ----- ----- ----- ----- ------- [no hits above thresholds] Alignments of top-scoring domains: [no hits above thresholds] // Query: Rabbit4Lib.820.C1 209 1 352 nseq=2; minus strand; translated Scores for sequence family classification (score includes all domains): Model Description Score E-value N -------- ----------- ----- ------- --- LSM LSM domain 44.4 2.6e-09 1 Parsed for domains: Model Domain seq-f seq-t hmm-f hmm-t score E-value -------- ------- ----- ----- ----- ----- ----- ------- LSM 1/1 6 66 .. 1 71 [] 44.4 2.6e-09 Alignments of top-scoring domains: LSM: domain 1 of 1, from 6 to 66: score 44.4, E = 2.6e-09 *->kfLkklFLNlRlgkrVtVeLknGrelrGtLkgfDqfmNlvLddveEt + g++V+V+L++G +rG+L + D +mN+ L+ +eE+ Rabbit4Lib 6 -----A-----SGRPVVVKLNSGVDYRGVLACLDGYMNIALEQTEEY 42 i.dgkknrklglvliRGnnIvlisp<-* +++ kn k+g+ +iRGnn+ Rabbit4Lib 43 VnGQLKN-KYGDAFIRGNNVXVHQY 66 // Query: Rabbit4Lib.821.C1 698 1 758 nseq=6; minus strand; translated Scores for sequence family classification (score includes all domains): Model Description Score E-value N -------- ----------- ----- ------- --- Proteasome Proteasome A-type and B-type 246.4 3.8e-70 1 Parsed for domains: Model Domain seq-f seq-t hmm-f hmm-t score E-value -------- ------- ----- ----- ----- ----- ----- ------- Proteasome 1/1 33 217 .. 1 194 [] 246.4 3.8e-70 Alignments of top-scoring domains: Proteasome: domain 1 of 1, from 33 to 217: score 246.4, E = 3.8e-70 *->vktGtTivGikgkdGVVlAaDkRatlGskllskdtveKifkiyddhi v G +vGik+ +GVVlA++k+ s+l+++++v K+ +i ++hi Rabbit4Lib 33 VAGGAPSVGIKAANGVVLATEKKQK--SILYDERSVHKVEPI-TKHI 76 gcafaGlaADartlvdyaraeaqlyrlrygepipvevLvkriadllqvyt g++++G+ +D r+lv +ar+ aq+y+l y+epip+ +Lv+r+a+++q yt Rabbit4Lib 77 GLVYSGMGPDYRVLVHRARKLAQQYYLVYQEPIPTAQLVQRVASVMQEYT 126 qysgrrPfgvslliaGvDekggPhLyqiDpsGsvieykdnatAiGgSGsq q++g+rPfgvslli+G++ +g+P+L+q DpsG+++++k atA+G ++ Rabbit4Lib 127 QSGGVRPFGVSLLICGWN-EGRPYLFQSDPSGAYFAWK--ATAMG-KNYV 172 yAygvLEklykredmtleeaielavkAlkeaierdalsggnievavi<-* +++LEk+y +ed++le+ai++a+ lke+ e+ ++ +niev+++ Rabbit4Lib 173 NGKTFLEKRY-NEDLELEDAIHTAILTLKESFEGQ-MTEDNIEVGIC 217 // Query: Rabbit4Lib.822.C1 161 843 1051 nseq=2; translated Scores for sequence family classification (score includes all domains): Model Description Score E-value N -------- ----------- ----- ------- --- [no hits above thresholds] Parsed for domains: Model Domain seq-f seq-t hmm-f hmm-t score E-value -------- ------- ----- ----- ----- ----- ----- ------- [no hits above thresholds] Alignments of top-scoring domains: [no hits above thresholds] // Query: Rabbit4Lib.824.C1 1413 1 1223 nseq=3; minus strand; translated Scores for sequence family classification (score includes all domains): Model Description Score E-value N -------- ----------- ----- ------- --- Perilipin Perilipin family 687.9 4.9e-203 1 Apolipoprotein Apolipoprotein A1/A4/E family -123.8 7 1 DUF939 Bacterial protein of unknown function -200.3 9.2 1 Parsed for domains: Model Domain seq-f seq-t hmm-f hmm-t score E-value -------- ------- ----- ----- ----- ----- ----- ------- Apolipoprotein 1/1 86 303 .. 1 277 [] -123.8 7 DUF939 1/1 30 326 .. 1 360 [] -200.3 9.2 Perilipin 1/1 1 366 [. 1 427 [] 687.9 4.9e-203 Alignments of top-scoring domains: Apolipoprotein: domain 1 of 1, from 86 to 303: score -123.8, E = 7 *->KalvlaLalllLtGcqArsfwQadePEvteqaWqqsqwdqvkdrfwv K +v + +tG + + d+ k++++ Rabbit4Lib 86 KGAVT----TTVTGARVS-VANTI----------TGVVDKTKGAVTG 117 YlrqVkdssdqaveqLessqvtqeLnllLedn.ldelksyaeeLqeqLgP ++ k++ +++ ++s ++ ++ +++ + +e L q P Rabbit4Lib 118 GVEKTKSMVNGSINTVLGSRM-----VQFVSSgVENALTKSELLVDQYLP 162 vaqefqarLsKetqalraelgkDlEdvrnrlaPyrdEvqamlgqnleeyR ++e L+Ke +++ d vq+ y Rabbit4Lib 163 LTEE---ELEKEAKKVEG----------------FDAVQKP------SYY 187 qrLePlareLrkrlrrdaeeLqkrLaPyaeelReraernVdalrerLgPy rL +l +Lr r+ q+ L ++ e+ + ++ ++ l+ + + Rabbit4Lib 188 VRLGSLSTKLRSRA------YQQALGRVK-EAKQKSQETISQLHSTVH-L 229 vEqlRqkaAtlltqrleeLrEraqpyaeEykeqleeqlselRekl..... +E +R++ + + + ++ + + +l e +++++++++ Rabbit4Lib 230 IEFARKN----VHSANQKIQ---DA-----QDKLYLSWVEWKRSIghddt 267 ..apvredlqevltpvlEqaQlklqaeafqeelkkkle<-* +++ +e+++ + + + l++q++ l + ++ Rabbit4Lib 268 deSHCAEHIESRTLAIARN--LTQQLQTTCHSLLSNIQ 303 DUF939: domain 1 of 1, from 30 to 326: score -200.3, E = 9.2 *->mkIGyRTiKTalattLAiiIAewLgLdyavSAGIiaILsIqpTkkrS G+ T T +a+t A+ I + L + ++ +T Rabbit4Lib 30 ---GVKTM-TSVAITSALPIFQKLEPQ----------IAVANTYA-- 60 LqaaiqRllacvLal......aiavvffeLfGysPvviGlyllifIPLtv ++++R+ + +l++++++++a++ +++ ++ v G + + ++t Rabbit4Lib 61 -CKGLDRIEEKLPILnqpttqVVASAKGAV---TTTVTGARVSVANTITG 106 kLKveeGivvSsVlsVlhllvsksENFisffMlllNEllLitvGvgvA.. + + G v+ V + +v +s i+ + l ++ + Gv A + Rabbit4Lib 107 VVDKTKGAVTGGVE-KTKSMVNGS---INTV-LGSRMVQFVSSGVENAlt 151 ...lLvNlYMLPPslekkLkeyqqkIEenlkeIlqeiayylRthesewkn +++lLv Y+ P e++L + +k+E + q+ +yy+R+++ ++k+ Rabbit4Lib 152 kseLLVDQYL--PLTEEELEKEAKKVEGF--DAVQKPSYYVRLGSLSTKL 197 eedilkLieeLdklIdkAkslAyRdvnNhffrtenyyyhYfeMReeQfFR ++ + + + ++Ak + + +++ +t + Rabbit4Lib 198 RS---RAYQQALGRVKEAKQK-SQETISQLHST--------------V-- 227 QavktikkaLeiLkrMhphltsiidhtdeqQinideklsnlladlteela ++++ + ++ s +++ q d + ++ l++++ + Rabbit4Lib 228 ----------HLIEFARKNVHSA--NQKIQ----DAQDKLYLSWVEWK-- 259 eqlgkenpaadlleeldkryKerLrkeFWkekkreqnLPeTreeFlllEt +++g ++ + + +e ++ +r + + +q L +T ++ l + Rabbit4Lib 260 RSIGHDDTDESHCAE-HIE--SRTLAIA---RNLTQQLQTTCHSL--LSN 301 RAmLfq.llneLEeyleiKssFytk<-* + L q+++ + ++ + + y+ Rabbit4Lib 302 IQGLPQnIQDQANHLGVMAGDIYSV 326 Perilipin: domain 1 of 1, from 1 to 366: score 687.9, E = 4.9e-203 *->matAvedlpqqesVvdRvlhLplvsrtikydlvssaykstkdaYpkV t +lvssay +tkd+Yp+ Rabbit4Lib 1 -------------------------XT--RPLVSSAYVNTKDQYPY- 19 KnvnsVcewaekgvesitsvAvtsaePiVkkLepqIavannlaCkGLDkL ++sVce+aekgv+++tsvA+tsa+Pi +kLepqIavan++aCkGLD++ Rabbit4Lib 20 --LKSVCEMAEKGVKTMTSVAITSALPIFQKLEPQIAVANTYACKGLDRI 67 EeKiPilyqPpekIvsnaKGAvtGAkdavsTrlrsakdsvvqpilgrvDK EeK+Pil+qP++++v++aK +av+T++++a+ sv+ +i+g+vDK Rabbit4Lib 68 EEKLPILNQPTTQVVASAK-------GAVTTTVTGARVSVANTITGVVDK 110 vKgAgtasvEsPlksvaaesintvlgtrvgqkfvDkYLassGvDtaltks +KgA+t++vE+ +ks++++sintvlg+r++q ++ssGv++altks Rabbit4Lib 111 TKGAVTGGVEK-TKSMVNGSINTVLGSRMVQ------FVSSGVENALTKS 153 EkLVsaLneyylPltkeelemeakkqegfddkkakPserGaikalvrlgs E LV ++ylPlt+eele+eakk+egfd++ +kPs ++vrlgs Rabbit4Lib 154 ELLV----DQYLPLTEEELEKEAKKVEGFDAV-QKPS------YYVRLGS 192 lStklkrrayQqalarvkaakkkSqevihqlqsvaeLielarknvssAvQ lStkl++rayQqal+rvk+ak+kSqe+i+ql+s+++Lie+arknv+sA+Q Rabbit4Lib 193 LSTKLRSRAYQQALGRVKEAKQKSQETISQLHSTVHLIEFARKNVHSANQ 242 kvsrrqdklyvsWvewlrSageEDpedqsdteaeqiEqrillltreltqq k++++qdkly+sWvew+rS+g D++d+s+ +ae+iE+r+l+++r+ltqq Rabbit4Lib 243 KIQDAQDKLYLSWVEWKRSIGH-DDTDESH-CAEHIESRTLAIARNLTQQ 290 lvtalktllqviqgipqnlqdtteevgsmagdiysafrttiarsDklktv l+t++++ll++iqg+pqn+qd+++++g+magdiys+fr+ a s +k+v Rabbit4Lib 291 LQTTCHSLLSNIQGLPQNIQDQANHLGVMAGDIYSVFRN--AGS--FKEV 336 sdealtSskgrllalkdsLkgvtdylVnnv<-* sd+ l Sskg+l+++k+sL++v+dylVnn+ Rabbit4Lib 337 SDSFLISSKGQLQKMKESLDDVMDYLVNNT 366 // Query: Rabbit4Lib.825.C1 201 139 225 nseq=2; translated Scores for sequence family classification (score includes all domains): Model Description Score E-value N -------- ----------- ----- ------- --- [no hits above thresholds] Parsed for domains: Model Domain seq-f seq-t hmm-f hmm-t score E-value -------- ------- ----- ----- ----- ----- ----- ------- [no hits above thresholds] Alignments of top-scoring domains: [no hits above thresholds] // Query: Rabbit4Lib.829.C1 367 15 400 nseq=2; minus strand; translated Scores for sequence family classification (score includes all domains): Model Description Score E-value N -------- ----------- ----- ------- --- [no hits above thresholds] Parsed for domains: Model Domain seq-f seq-t hmm-f hmm-t score E-value -------- ------- ----- ----- ----- ----- ----- ------- [no hits above thresholds] Alignments of top-scoring domains: [no hits above thresholds] // Query: Rabbit4Lib.835.C1 995 1 1374 nseq=2; translated Scores for sequence family classification (score includes all domains): Model Description Score E-value N -------- ----------- ----- ------- --- Cullin Cullin family 675.3 3.1e-199 1 DUF1198 Protein of unknown function (DUF1198) -37.9 4.7 1 Parsed for domains: Model Domain seq-f seq-t hmm-f hmm-t score E-value -------- ------- ----- ----- ----- ----- ----- ------- DUF1198 1/1 219 370 .. 1 150 [] -37.9 4.7 Cullin 1/1 1 458 [. 1 656 [] 675.3 3.1e-199 Alignments of top-scoring domains: DUF1198: domain 1 of 1, from 219 to 370: score -37.9, E = 4.7 *->miWliLAtlvvvFvvGFRvLtsd.......aRkAiRRLseRLniDvv m + F+ F+ + + ++ aR +RL L + + Rabbit4Lib 219 MTESEVEDRLTSFITAFKYIDDKdvfqkfyARMLAKRLIHGLSMSMD 265 PvEsmvDqmGKsAGdEFLrYLHRP..DEs...HLqnAAqvLLiWqivivD E+m+ ++ ++ G EF LHR +D s + L n + q ++D Rabbit4Lib 266 SEEAMINKLKQACGYEFTSKLHRMytDMSvsaDLNNKFNNFIKNQDTVID 315 GseqnLlrWHRlLqKARLAAPitDaqvRLALGFLREtEPemqeinAFqlR + + +Lq +AA D+ L + E+E +q F l Rabbit4Lib 316 LG---ISFQIYVLQAGXMAA---DSGSVLHVAIPQELEKSVQ---MFELF 356 YnAFFqPeEGvHWLH<-* Y F WLH Rabbit4Lib 357 YSQHFSGRK-LTWLH 370 Cullin: domain 1 of 1, from 1 to 458: score 675.3, E = 3.1e-199 *->WekLrdaidqiltnlknvsplsyeeLYtaVYniCtstsavphklgek + + ++ + Rabbit4Lib 1 -XTRPEQYKKKF----------------------------------- 11 LYnrLkeyleeyvkalrkslleisddenlLkeyikeWkdfstsmkmindi Rabbit4Lib - -------------------------------------------------- - fmYLdRyyvkrnidgkkevyeiyeLgLdiWreelfdnikdrlidalLdlI Rabbit4Lib - -------------------------------------------------- - ekeRkGeaidrliknvvdmlvsLgldekDmkkqklkvYkedFEkpFLeaT +lk+Y+e FE pFL++T Rabbit4Lib 12 ---------------------------------PLKFYQEIFESPFLTET 28 seFYkkEsskfLqensvseYlkkvEkrLeeEeeRvrlYLhsstekkliev +e+Yk+E+s++Lqe+++s+Y++kv rL++Ee R+r+YLh+s+ k+i+ Rabbit4Lib 29 GEYYKQEASNLLQESNCSQYMEKVLGRLKDEEIRCRKYLHPSSYIKVIHE 78 vekvLIekHlefLlmehsefq.LldnnkleDLrrMYrLlsRvpnGLeplr +++ ++++Hl+fL h+e++++++++k +D+++MY+Ll+ v++GL++++ Rabbit4Lib 79 CQQRMVADHLQFL---HAECHnIIRQEKKNDMANMYVLLRAVSTGLPHMI 125 kilekhvkkeGlalvsklaaetdpkdyVeeLLelhdkydslvneaFnnDp + l++h++ eGl + s+l++e++p+ +Ve++Le+h k+ +l+n++ n+D Rabbit4Lib 126 QELQNHIHDEGLRATSNLTQENMPTLFVESVLEVHGKFVQLINTVLNGDQ 175 lFlnaLdkAfesfiNsnvvtkaskspELLAkYcDdlLKKgsKgleeeele +F++aLdkA +s++N +++ ++++pELLAkYcD+lLKK++Kg++e+e+e Rabbit4Lib 176 HFMSALDKALTSVVNYREPKSVCRAPELLAKYCDSLLKKSAKGMTESEVE 225 ekldkiivlfkyiedKDvFekfYrkmLAkRLLngkSasLddaEkrmiekL ++l+ +i+ fkyi+dKDvF+kfY +mLAkRL++g S s +d+E+ mi+kL Rabbit4Lib 226 DRLTSFITAFKYIDDKDVFQKFYARMLAKRLIHGLSMS-MDSEEAMINKL 274 KqvecGyefTsKLegMfkDislSkelnnsFknhlennndnldlkledeen Kq +cGyefTsKL++M +D+s+S +lnn+F+n+++n+ ++ dl Rabbit4Lib 275 KQ-ACGYEFTSKLHRMYTDMSVSADLNNKFNNFIKNQDTVIDL------- 316 eEgidlsvkvLstgfWPtlp.epsinfnLPeelekalerFeefYlkkhsg gi+++++vL++g ++ + + +P+elek++++Fe fY++ +sg Rabbit4Lib 317 --GISFQIYVLQAGXMAADSgSVLH-VAIPQELEKSVQMFELFYSQHFSG 363 pdRkLtWlhsLGkgelkaefndgtkskyeltVstyQmavLLLFNdkeelt RkLtWlh L++ge+k+++ +++ y+ V+tyQmavLL+FN++e ++ Rabbit4Lib 364 --RKLTWLHYLCTGEVKMNYLGKP---YVAMVTTYQMAVLLAFNNSEAVS 408 yeelqeatqipedeLrrtLqsLlkakvllllllryetpgekspkdkeisp y+elq++tq++e+eL++t++sLl++k++ + +++++i+ Rabbit4Lib 409 YKELQDSTQMNEKELTKTIKSLLDVKMIN-----------HDSEKEDIDA 447 ntkfslNenft<-* ++ fslN+nf+ Rabbit4Lib 448 ESSFSLNMNFS 458 // Query: Rabbit4Lib.835.C2 593 86 739 nseq=4; translated Scores for sequence family classification (score includes all domains): Model Description Score E-value N -------- ----------- ----- ------- --- Cullin Cullin family 37.3 3.3e-09 1 Parsed for domains: Model Domain seq-f seq-t hmm-f hmm-t score E-value -------- ------- ----- ----- ----- ----- ----- ------- Cullin 1/1 1 117 [. 1 656 [] 37.3 3.3e-09 Alignments of top-scoring domains: Cullin: domain 1 of 1, from 1 to 117: score 37.3, E = 3.3e-09 *->WekLrdaidqiltnlknvsplsyeeLYtaVYniCtstsavphklgek Rabbit4Lib - ----------------------------------------------- - LYnrLkeyleeyvkalrkslleisddenlLkeyikeWkdfstsmkmindi Rabbit4Lib - -------------------------------------------------- - fmYLdRyyvkrnidgkkevyeiyeLgLdiWreelfdnikdrlidalLdlI Rabbit4Lib - -------------------------------------------------- - ekeRkGeaidrliknvvdmlvsLgldekDmkkqklkvYkedFEkpFLeaT Rabbit4Lib - -------------------------------------------------- - seFYkkEsskfLqensvseYlkkvEkrLeeEeeRvrlYLhsstekkliev Rabbit4Lib - -------------------------------------------------- - vekvLIekHlefLlmehsefqLldnnkleDLrrMYrLlsRvpnGLeplrk Rabbit4Lib - -------------------------------------------------- - ilekhvkkeGlalvsklaaetdpkdyVeeLLelhdkydslvneaFnnDpl Rabbit4Lib - -------------------------------------------------- - FlnaLdkAfesfiNsnvvtkaskspELLAkYcDdlLKKgsKgleeeelee Rabbit4Lib - -------------------------------------------------- - kldkiivlfkyiedKDvFekfYrkmLAkRLLngkSasLddaEkrmiekLK Rabbit4Lib - -------------------------------------------------- - qvecGyefTsKLegMfkDislSkelnnsFknhlennndnldlkledeene + Rabbit4Lib 1 I------------------------------------------------- 1 EgidlsvkvLstgfWPtlpepsinfnLPeelekalerFeefYlkkhsgpd P+elek++++Fe fY++ +sg Rabbit4Lib 2 ---------------------------PQELEKSVQMFELFYSQHFSG-- 22 RkLtWlhsLGkgelkaefndgtkskyeltVstyQmavLLLFNdkeeltye RkLtWlh L++ge+k+++ +++ y+ V+tyQmavLL+FN++e ++y+ Rabbit4Lib 23 RKLTWLHYLCTGEVKMNYLGKP---YVAMVTTYQMAVLLAFNNSEAVSYK 69 elqeatqipedeLrrtLqsLlkakvllllllryetpgekspkdkeispnt elq++tq++e+eL++t++sLl++k++ + +++++i+ ++ Rabbit4Lib 70 ELQDSTQMNEKELTKTIKSLLDVKMIN-----------HDSEKEDIDAES 108 kfslNenft<-* fslN+nf+ Rabbit4Lib 109 SFSLNMNFS 117 // Query: Rabbit4Lib.836.C1 144 1 160 nseq=2; minus strand; translated Scores for sequence family classification (score includes all domains): Model Description Score E-value N -------- ----------- ----- ------- --- [no hits above thresholds] Parsed for domains: Model Domain seq-f seq-t hmm-f hmm-t score E-value -------- ------- ----- ----- ----- ----- ----- ------- [no hits above thresholds] Alignments of top-scoring domains: [no hits above thresholds] // Query: Rabbit4Lib.837.C1 591 53 598 nseq=6; minus strand; translated Scores for sequence family classification (score includes all domains): Model Description Score E-value N -------- ----------- ----- ------- --- Ribosomal_S9 Ribosomal protein S9/S16 281.7 9.6e-81 1 Parsed for domains: Model Domain seq-f seq-t hmm-f hmm-t score E-value -------- ------- ----- ----- ----- ----- ----- ------- Ribosomal_S9 1/1 19 151 .. 1 136 [] 281.7 9.6e-81 Alignments of top-scoring domains: Ribosomal_S9: domain 1 of 1, from 19 to 151: score 281.7, E = 9.6e-81 *->GRRKSAvArvfvkpPkDGnGkIlvNgrpielyfpeelrrkvveppLl GR+K+A+A++++ nG+I+vNgrp+e+++p++l++k++ep+Ll Rabbit4Lib 19 GRKKTATAVAHCNG---XNGLIKVNGRPLEMIEPRTLQYKLLEPVLL 62 lvedrvgnyDirvrVkGGGisGQAdAIRhAIArALvafdpKyVDeqskkE l+++r++++DirvrVkGGG+++Q++AIR++I++ALva+++KyVDe+skkE Rabbit4Lib 63 LGKERFAGVDIRVRVKGGGHVAQIYAIRQSISKALVAYYQKYVDEASKKE 112 LedrsklydrglLtrDpRqtErKKyGlkkARkrpQkSkR<-* ++d++++ydr+lL++DpR++E+KK+G+++AR+r+QkS+R Rabbit4Lib 113 IKDILIQYDRTLLVADPRRCESKKFGGPGARARYQKSYR 151 // Query: Rabbit4Lib.848.C1 301 124 471 nseq=2; minus strand; translated Scores for sequence family classification (score includes all domains): Model Description Score E-value N -------- ----------- ----- ------- --- [no hits above thresholds] Parsed for domains: Model Domain seq-f seq-t hmm-f hmm-t score E-value -------- ------- ----- ----- ----- ----- ----- ------- [no hits above thresholds] Alignments of top-scoring domains: [no hits above thresholds] // Query: Rabbit4Lib.856.C1 403 38 365 nseq=2; minus strand; translated Scores for sequence family classification (score includes all domains): Model Description Score E-value N -------- ----------- ----- ------- --- Tom7 TOM7 family 90.9 2.6e-23 1 Parsed for domains: Model Domain seq-f seq-t hmm-f hmm-t score E-value -------- ------- ----- ----- ----- ----- ----- ------- Tom7 1/1 9 53 .. 1 49 [] 90.9 2.6e-23 Alignments of top-scoring domains: Tom7: domain 1 of 1, from 9 to 53: score 90.9, E = 2.6e-23 *->KErigktlkiskvVaHYGFIPLVlyLGmargaeP.MPnGqiLkPsll K+r+++++k++++++++GFIP+V+yLG++rga+P+MP +P +l Rabbit4Lib 9 KQRLQQLFKGGQFAIRWGFIPFVIYLGFKRGADPgMP-----EPTVL 50 sLL<-* sLL Rabbit4Lib 51 SLL 53 // Query: Rabbit4Lib.856.C2 784 284 770 nseq=4; minus strand; translated Scores for sequence family classification (score includes all domains): Model Description Score E-value N -------- ----------- ----- ------- --- Proteasome Proteasome A-type and B-type 85.8 8.9e-22 1 Parsed for domains: Model Domain seq-f seq-t hmm-f hmm-t score E-value -------- ------- ----- ----- ----- ----- ----- ------- Proteasome 1/1 1 147 [. 1 194 [] 85.8 8.9e-22 Alignments of top-scoring domains: Proteasome: domain 1 of 1, from 1 to 147: score 85.8, E = 8.9e-22 *->vktGtTivGikgkdGVVlAaDkRatlGskllskdtveKifkiyddhi K+++i ++++ Rabbit4Lib 1 -------------------------------------KVIEI-NPYL 9 gcafaGlaADartlvdyaraeaqlyrlrygepipvevLvkriadllqvyt + ++aG aAD+ ++ +++ +++ y+lr+ e+i+v +a++l++++ Rabbit4Lib 10 LGTMAGGAADCSFWERLLARQCRIYELRNKERISVA-----AASKLLANM 54 qysgrrPfg.vslliaGvDekggPhLyqiDpsGsvieykdnatAiGgSGs y ++++ ++++++i+G+D+ g P Ly++D G++i+ at Gs Rabbit4Lib 55 VYQYKGMGLsMGTMICGWDKRG-PGLYYVDSEGNRISG---ATFSEVXGS 100 qyAygvLEklykredmtleeaielavkAlkeaierdalsggnievavi<- yAygv++++y d+++e+a++la++A+++a++rda+sgg ++++++ Rabbit4Lib 101 VYAYGVMDRGY-SYDLEVEQAYDLARRAIYQATYRDAYSGGAVNLYHV 147 * Rabbit4Lib - - // Query: Rabbit4Lib.862.C1 348 1 396 nseq=2; minus strand; translated Scores for sequence family classification (score includes all domains): Model Description Score E-value N -------- ----------- ----- ------- --- ATP-synt_F6 Mitochondrial ATP synthase coupling facto 226.1 5e-64 1 Parsed for domains: Model Domain seq-f seq-t hmm-f hmm-t score E-value -------- ------- ----- ----- ----- ----- ----- ------- ATP-synt_F6 1/1 29 122 .. 1 97 [] 226.1 5e-64 Alignments of top-scoring domains: ATP-synt_F6: domain 1 of 1, from 29 to 122: score 226.1, E = 5e-64 *->vlrsalsvslrrNiGvtAvAfnKelDPiqqLFlDKvREYklKRsasG v+rsa+ v+lrrNiGvtAvAfnKelDP+q+LF+DK+REYk+KR+asG Rabbit4Lib 29 VVRSAVAVHLRRNIGVTAVAFNKELDPVQKLFVDKIREYKSKRQASG 75 kpVDsGPeyeqeLkrelerLaqqYGkdekvDMltFPeFkfpDvkvdpIsk +pVD+GP y+q+L +el++L+q++Gk +DM+tFP+Fkf+D+k++ I+k Rabbit4Lib 76 GPVDAGPSYQQDLEKELFKLKQMFGK---ADMNTFPTFKFEDPKFETIEK 122 <-* Rabbit4Lib - - // Query: Rabbit4Lib.862.C2 402 80 425 nseq=2; minus strand; translated Scores for sequence family classification (score includes all domains): Model Description Score E-value N -------- ----------- ----- ------- --- ATP-synt_F6 Mitochondrial ATP synthase coupling facto 226.1 5e-64 1 Parsed for domains: Model Domain seq-f seq-t hmm-f hmm-t score E-value -------- ------- ----- ----- ----- ----- ----- ------- ATP-synt_F6 1/1 12 105 .. 1 97 [] 226.1 5e-64 Alignments of top-scoring domains: ATP-synt_F6: domain 1 of 1, from 12 to 105: score 226.1, E = 5e-64 *->vlrsalsvslrrNiGvtAvAfnKelDPiqqLFlDKvREYklKRsasG v+rsa+ v+lrrNiGvtAvAfnKelDP+q+LF+DK+REYk+KR+asG Rabbit4Lib 12 VVRSAVAVHLRRNIGVTAVAFNKELDPVQKLFVDKIREYKSKRQASG 58 kpVDsGPeyeqeLkrelerLaqqYGkdekvDMltFPeFkfpDvkvdpIsk +pVD+GP y+q+L +el++L+q++Gk +DM+tFP+Fkf+D+k++ I+k Rabbit4Lib 59 GPVDAGPSYQQDLEKELFKLKQMFGK---ADMNTFPTFKFEDPKFETIEK 105 <-* Rabbit4Lib - - // Query: Rabbit4Lib.863.C1 404 1 473 nseq=2; minus strand; translated Scores for sequence family classification (score includes all domains): Model Description Score E-value N -------- ----------- ----- ------- --- UQ_con Ubiquitin-conjugating enzyme 226.4 4.1e-64 1 Parsed for domains: Model Domain seq-f seq-t hmm-f hmm-t score E-value -------- ------- ----- ----- ----- ----- ----- ------- UQ_con 1/1 9 147 .. 1 165 [] 226.4 4.1e-64 Alignments of top-scoring domains: UQ_con: domain 1 of 1, from 9 to 147: score 226.4, E = 4.1e-64 *->RLqkElkelektelqkdpppgisagpvddpdgpnnlfeWevtIrGPe RL+kEl e++k + ++++ vd++ nl++W+++I++ + Rabbit4Lib 9 RLMKELE-----EIRKCGMKNFRNIQVDEA----NLLTWQGLIVP-D 45 gTpYeGGvFkldieFPedYPfkPPkvkFtTkiyHPNVdsesGeiCLdILk pY +G F+++i+FP +YPfkPPk++F+TkiyHPN+d e G++CL++++ Rabbit4Lib 46 NPPYDKGAFRIEINFPAEYPFKPPKITFKTKIYHPNID-EKGQVCLPVIS 94 PGDDpgYEaderddevWsPaltvrsvLlsiqsLLLsePyNpedPlnaeaA e+ W+Pa+++ +v +s+++L ++P pe+Pl a++A Rabbit4Lib 95 ---------AEN----WKPATKTDQVIQSLIALV-NDP-QPEHPLRADLA 129 klykenreefkkrvreyv<-* ++y+++r++f+k+++e++ Rabbit4Lib 130 EEYSKDRKKFCKNAEEFT 147 // Query: Rabbit4Lib.870.C1 2000 1 959 nseq=2; minus strand; translated Scores for sequence family classification (score includes all domains): Model Description Score E-value N -------- ----------- ----- ------- --- Gelsolin Gelsolin repeat 219.1 6.3e-62 3 Parsed for domains: Model Domain seq-f seq-t hmm-f hmm-t score E-value -------- ------- ----- ----- ----- ----- ----- ------- Gelsolin 1/3 3 77 .. 1 96 [] 65.9 8.6e-16 Gelsolin 2/3 117 192 .. 1 96 [] 80.3 3.9e-20 Gelsolin 3/3 234 312 .. 1 96 [] 72.9 6.8e-18 Alignments of top-scoring domains: Gelsolin: domain 1 of 3, from 3 to 77: score 65.9, E = 8.6e-16 *->nfvlpppvplsqeslnsgdcyLLDngfkgg.lnyiiflWvGkkssqW + + +q+ ++sgd+yL++++ +++ ++++lW+G++ss+ Rabbit4Lib 3 -----ASGRENQGIFFSGDSYLVLHNG--PeEVSHLHLWIGQQSSR- 41 RKagYhdPdeklaaallavelddaaqikqdrfplpvvdrvvqgkeparFl de++a a lav l++ ++++pv++r+vqg+e+ F+ Rabbit4Lib 42 --------DEQGACAVLAVHLNTQ------LGERPVQHREVQGNESDLFM 77 <-* Rabbit4Lib - - Gelsolin: domain 2 of 3, from 117 to 192: score 80.3, E = 3.9e-20 *->nfvlpppvplsqeslnsgdcyLLDngfkgglnyiiflWvGkkssqWR +++++++ l ++s+n+gdc++LD g+ +if W+G+ks+ Rabbit4Lib 117 KNIRATERALGWDSFNTGDCFILDLGQ------NIFAWCGSKSNI-- 155 KagYhdPdeklaaallavelddaaqikqdrfplpvvdrvvqgkeparFl< e+++a la ++d++ r+++++v+ v++g+epa+++ Rabbit4Lib 156 -------LERNKARDLALAIRDSE-----RQGKAQVEIVTDGEEPAEMI 192 -* Rabbit4Lib - - Gelsolin: domain 3 of 3, from 234 to 312: score 72.9, E = 6.8e-18 *->nfvlpppvplsqeslnsgdcyLLDngfkgglnyiiflWvGkkssqWR ++++ p++ e+l s+dc++LDng +++i++W G+k+++ Rabbit4Lib 234 LTKVADSSPFAPELLVSDDCFVLDNGL----CGKIYIWKGRKANE-- 274 KagYhdPdeklaaallavelddaaqikqdrfplpvvdrvvqgkeparFl< e+ aa+++a++++ ++ + p ++v+ +qg+e++ F+ Rabbit4Lib 275 -------KERQAALQVAEGFISRMR----YAPNTQVEILPQGRESPIFK 312 -* Rabbit4Lib - - // Query: Rabbit4Lib.872.C1 418 163 517 nseq=2; minus strand; translated Scores for sequence family classification (score includes all domains): Model Description Score E-value N -------- ----------- ----- ------- --- [no hits above thresholds] Parsed for domains: Model Domain seq-f seq-t hmm-f hmm-t score E-value -------- ------- ----- ----- ----- ----- ----- ------- [no hits above thresholds] Alignments of top-scoring domains: [no hits above thresholds] // Query: Rabbit4Lib.876.C1 300 1 399 nseq=2; minus strand; translated Scores for sequence family classification (score includes all domains): Model Description Score E-value N -------- ----------- ----- ------- --- UMP1 Proteasome maturation factor UMP1 205.6 7.8e-58 1 Parsed for domains: Model Domain seq-f seq-t hmm-f hmm-t score E-value -------- ------- ----- ----- ----- ----- ----- ------- UMP1 1/1 10 133 .] 1 133 [] 205.6 7.8e-58 Alignments of top-scoring domains: UMP1: domain 1 of 1, from 10 to 133: score 205.6, E = 7.8e-58 *->slsvlehevsglkntgdalreGlipvknqlaasHPLessekNRweaq s++v e+++sg+++++d+lr+G+++vkn+l++sHPLe+sekN ++ + Rabbit4Lib 10 SIPVTELSASGPFESHDLLRKGFSCVKNELLPSHPLELSEKN-FQLN 55 QrqrkmevLRniyGlaaPLKldMEqkivsrvqRpPgllpSsnlhlDiLtG Q+++++++LRni+Gl+aPLKl+ME+k+v++vqR+P +l+Ssnl+lDiL+G Rabbit4Lib 56 QDKMNFSTLRNIQGLFAPLKLQMEFKAVQQVQRLP-FLTSSNLSLDILRG 104 redsidFEDilNdPedsEtmvpddpHhgmEkrL.Gil<-* ++++i+FEDilNdP++sE+m+ E L+G Rabbit4Lib 105 NDETIGFEDILNDPSQSELMG--------EXTLdGGT 133 // Query: Rabbit4Lib.882.C1 694 1 384 nseq=2; minus strand; translated Scores for sequence family classification (score includes all domains): Model Description Score E-value N -------- ----------- ----- ------- --- HSP9_HSP12 Heat shock protein 9 / 12 -18.8 9.3 1 Parsed for domains: Model Domain seq-f seq-t hmm-f hmm-t score E-value -------- ------- ----- ----- ----- ----- ----- ------- HSP9_HSP12 1/1 15 74 .. 1 59 [] -18.8 9.3 Alignments of top-scoring domains: HSP9_HSP12: domain 1 of 1, from 15 to 74: score -18.8, E = 9.3 *->MSDlaRKdFge...KakEklTPDSs.KSTaEqvKEkvTDklDkvAgk M a K F e+++K kE +TP S+a K + Dk k gk Rabbit4Lib 15 MVNDAEK-FAEedkKLKERMTPETElESYAYSLKNQIGDKE-KLGGK 59 vtsdddKStvQkAhDk<-* s+d K t+ kA Rabbit4Lib 60 LSSED-KETMEKAVEE 74 // Query: Rabbit4Lib.884.C1 3178 127 1497 nseq=4; minus strand; translated Scores for sequence family classification (score includes all domains): Model Description Score E-value N -------- ----------- ----- ------- --- LRR_1 Leucine Rich Repeat 39.8 6e-08 13 Parsed for domains: Model Domain seq-f seq-t hmm-f hmm-t score E-value -------- ------- ----- ----- ----- ----- ----- ------- LRR_1 1/13 52 76 .. 1 25 [] 5.5 2.5e+02 LRR_1 2/13 81 108 .. 1 25 [] 8.4 82 LRR_1 3/13 109 133 .. 1 25 [] 9.5 53 LRR_1 4/13 138 161 .. 1 25 [] 1.0 1.4e+03 LRR_1 5/13 166 190 .. 1 25 [] 7.6 1.1e+02 LRR_1 6/13 195 218 .. 1 25 [] 1.5 1.1e+03 LRR_1 7/13 223 247 .. 1 25 [] 10.3 40 LRR_1 8/13 252 278 .. 1 25 [] 2.1 8.7e+02 LRR_1 9/13 280 304 .. 1 25 [] 4.3 3.9e+02 LRR_1 10/13 309 332 .. 1 25 [] 0.6 1.6e+03 LRR_1 11/13 337 361 .. 1 25 [] 8.9 66 LRR_1 12/13 366 393 .. 1 25 [] 0.4 1.7e+03 LRR_1 13/13 394 415 .. 1 25 [] 10.0 45 Alignments of top-scoring domains: LRR_1: domain 1 of 13, from 52 to 76: score 5.5, E = 2.5e+02 *->nLeeLdLsgCNpslsgs..lppsl.glp<-* L+eL+L+ N +l g++++ l+gl+ Rabbit4Lib 52 ALTELSLDL-N-EL-GDagVGLVLqGLQ 76 LRR_1: domain 2 of 13, from 81 to 108: score 8.4, E = 82 *->nLeeLdLsgCNpslsgs.....lppsl.glp<-* +L++L+L+ C l+ +++ + lp+ l+ +p Rabbit4Lib 81 QLRKLSLQTC--CLT-EagcgvLPSALrAMP 108 LRR_1: domain 3 of 13, from 109 to 133: score 9.5, E = 53 *->nLeeLdLsgCNpslsgs..lppsl.glp<-* +L+eL Ls+ N l g+++l ++gl Rabbit4Lib 109 SLRELQLSD-N-AL-GDagLRLLCqGLL 133 LRR_1: domain 4 of 13, from 138 to 161: score 1.0, E = 1.4e+03 *->nLeeLdLsgCNpslsgslpps.l.glp<-* +e L+L++C +ls + ++l + Rabbit4Lib 138 CVERLRLEYC--KLS-AASCEaLaSVL 161 LRR_1: domain 5 of 13, from 166 to 190: score 7.6, E = 1.1e+02 *->nLeeLdLsgCNpslsgs..lppsl.glp<-* L+eL Ls+ N l g++++ + ++gl+ Rabbit4Lib 166 GLKELALSN-N-DL-GEagVRALCqGLK 190 [output cut off at A = 5 top alignments] // Query: Rabbit4Lib.886.C1 101 1 144 nseq=2; minus strand; translated Scores for sequence family classification (score includes all domains): Model Description Score E-value N -------- ----------- ----- ------- --- [no hits above thresholds] Parsed for domains: Model Domain seq-f seq-t hmm-f hmm-t score E-value -------- ------- ----- ----- ----- ----- ----- ------- [no hits above thresholds] Alignments of top-scoring domains: [no hits above thresholds] // Query: Rabbit4Lib.889.C1 215 199 315 nseq=2; minus strand; translated Scores for sequence family classification (score includes all domains): Model Description Score E-value N -------- ----------- ----- ------- --- [no hits above thresholds] Parsed for domains: Model Domain seq-f seq-t hmm-f hmm-t score E-value -------- ------- ----- ----- ----- ----- ----- ------- [no hits above thresholds] Alignments of top-scoring domains: [no hits above thresholds] // Query: Rabbit4Lib.894.C1 1346 1 1292 nseq=4; minus strand; translated Scores for sequence family classification (score includes all domains): Model Description Score E-value N -------- ----------- ----- ------- --- Nop Putative snoRNA binding domain 329.0 5.3e-95 1 NOSIC NOSIC (NUC001) domain 118.5 1.3e-31 1 Parsed for domains: Model Domain seq-f seq-t hmm-f hmm-t score E-value -------- ------- ----- ----- ----- ----- ----- ------- NOSIC 1/1 58 110 .. 1 53 [] 118.5 1.3e-31 Nop 1/1 150 298 .. 1 153 [] 329.0 5.3e-95 Alignments of top-scoring domains: NOSIC: domain 1 of 1, from 58 to 110: score 118.5, E = 1.3e-31 *->mIIqaiallddiDkeiNlfhmRvrEWYswHFPELekiVpdnldYarv mI+qai+lldd+Dke+N++ mR+rEWY+wHFPEL+ki+ dnl+Y+++ Rabbit4Lib 58 MIVQAISLLDDLDKELNNYIMRCREWYGWHFPELGKIISDNLTYCKC 104 VkliGn<-* +++G+ Rabbit4Lib 105 LQKVGD 110 Nop: domain 1 of 1, from 150 to 298: score 329.0, E = 5.3e-95 *->nilelaervlsLaeyRkqleeYieskMskiAPNLtaLVGelVGARLI nil+l+ +v++++eyR+ql+eY++++M++iAPN+t++VGelVGARLI Rabbit4Lib 150 NILHLCTQVIEISEYRTQLYEYLQNRMMAIAPNVTVMVGELVGARLI 196 shAGSLtnLAKlPASTIQvLGAeKaLfraLkttkaktPKyGlIYhsplIq +hAGSL+nLAK++AST+Q+LGAeKaLfraLk ++++tPKyGlIYh++l++ Rabbit4Lib 197 AHAGSLLNLAKHAASTVQILGAEKALFRALK-SRRDTPKYGLIYHASLVG 245 kaPpkvrGKiaRmLAAKlaLAaRiDafseepdssetvfGielreelekRl +++pk++GKi+RmLAAK +LA+R+Daf+e+++s ++G+e+r++le+Rl Rabbit4Lib 246 QTSPKHKGKISRMLAAKTVLAIRYDAFGEDSSS---AMGVENRAKLEARL 292 ekleek<-* ++le++ Rabbit4Lib 293 RTLEDR 298 // Query: Rabbit4Lib.898.C1 333 1 497 nseq=2; minus strand; translated Scores for sequence family classification (score includes all domains): Model Description Score E-value N -------- ----------- ----- ------- --- [no hits above thresholds] Parsed for domains: Model Domain seq-f seq-t hmm-f hmm-t score E-value -------- ------- ----- ----- ----- ----- ----- ------- [no hits above thresholds] Alignments of top-scoring domains: [no hits above thresholds] // Query: Rabbit4Lib.900.C1 1216 47 664 nseq=3; minus strand; translated Scores for sequence family classification (score includes all domains): Model Description Score E-value N -------- ----------- ----- ------- --- [no hits above thresholds] Parsed for domains: Model Domain seq-f seq-t hmm-f hmm-t score E-value -------- ------- ----- ----- ----- ----- ----- ------- [no hits above thresholds] Alignments of top-scoring domains: [no hits above thresholds] // Query: Rabbit4Lib.901.C1 179 358 447 nseq=2; translated Scores for sequence family classification (score includes all domains): Model Description Score E-value N -------- ----------- ----- ------- --- [no hits above thresholds] Parsed for domains: Model Domain seq-f seq-t hmm-f hmm-t score E-value -------- ------- ----- ----- ----- ----- ----- ------- [no hits above thresholds] Alignments of top-scoring domains: [no hits above thresholds] // Query: Rabbit4Lib.907.C1 618 1 846 nseq=2; minus strand; translated Scores for sequence family classification (score includes all domains): Model Description Score E-value N -------- ----------- ----- ------- --- Peptidase_C48 Ulp1 protease family, C-terminal cataly -16.3 0.06 1 Parsed for domains: Model Domain seq-f seq-t hmm-f hmm-t score E-value -------- ------- ----- ----- ----- ----- ----- ------- Peptidase_C48 1/1 30 222 .. 1 245 [] -16.3 0.06 Alignments of top-scoring domains: Peptidase_C48: domain 1 of 1, from 30 to 222: score -16.3, E = 0.06 *->isitmrdlktltkk....ewlnDtiidfylrylaerllpdPilkekf +++ +++++++++++++l ++ + + + + Rabbit4Lib 30 SNKGEPACQKVVDRskneNCLQNESLSSIHHPDGLSK---------- 66 tsalthffnsFfytklksrfkwgdekdelykdvkrgtargekkkkkdlfd +++ ++ ++l + +++ +d ++ + + + l+d Rabbit4Lib 67 IRLNYSDESTESGKMLDEELIDF------SEDQDNQD---DSSDDGFLAD 107 kDyiyvPinedgkksHWvllvIdlpdkkkkdqstivilDSlislntekav + ++ k I++ + ++ + te ++ Rabbit4Lib 108 DNCNSEIGQWHLK------PTICKQXL------YTTY------GFTERPF 139 kti..talarplsdelpylkrerlslkksfdkkswdlqpfeikrltmkvP +++ ++ +r l++e++ k++ k+sf+k +++ + +kvP Rabbit4Lib 140 EIKccQDSKRDLEVEWEVKKGS----KRSFSKDVMK-------GSNPKVP 178 QQpngyDCGiyvlkfielfaegppqdfmttindkklkdlksfrkklakei QQ+n++DCG+yvl+++e f+e+p+ f + + + kl+ Rabbit4Lib 179 QQNNFSDCGVYVLQYVESFFENPILNFEL----------TYEFGKLVSSP 218 yeel<-* +e Rabbit4Lib 219 KNEN 222 // Query: Rabbit4Lib.908.C1 408 1 1101 nseq=2; minus strand; translated Scores for sequence family classification (score includes all domains): Model Description Score E-value N -------- ----------- ----- ------- --- zf-C2H2 Zinc finger, C2H2 type 213.7 2.7e-60 8 GATA GATA zinc finger 5.6 0.52 1 zf-BED BED zinc finger -3.8 7.3 1 C1_1 Phorbol esters/diacylglycerol binding domain -6.5 1.4 1 Parsed for domains: Model Domain seq-f seq-t hmm-f hmm-t score E-value -------- ------- ----- ----- ----- ----- ----- ------- zf-C2H2 1/8 27 49 .. 1 24 [] 34.9 1.9e-06 zf-C2H2 2/8 55 77 .. 1 24 [] 27.4 0.00033 zf-BED 1/1 40 78 .. 1 52 [] -3.8 7.3 zf-C2H2 3/8 83 105 .. 1 24 [] 35.0 1.7e-06 C1_1 1/1 45 106 .. 1 55 [] -6.5 1.4 zf-C2H2 4/8 111 133 .. 1 24 [] 32.7 8.5e-06 zf-C2H2 5/8 167 189 .. 1 24 [] 26.0 0.0009 zf-C2H2 6/8 241 263 .. 1 24 [] 37.4 3.2e-07 zf-C2H2 7/8 269 291 .. 1 24 [] 32.3 1.1e-05 GATA 1/1 271 312 .. 1 36 [] 5.6 0.52 zf-C2H2 8/8 297 319 .. 1 24 [] 33.9 3.7e-06 Alignments of top-scoring domains: zf-C2H2: domain 1 of 8, from 27 to 49: score 34.9, E = 1.9e-06 *->ykCpfdCgksFsrksnLkrHlrtH<-* y+C+ Cgk+F r+s+L +H+r+H Rabbit4Lib 27 YQCS-LCGKAFQRSSSLVQHQRIH 49 zf-C2H2: domain 2 of 8, from 55 to 77: score 27.4, E = 0.00033 *->ykCpfdCgksFsrksnLkrHlrtH<-* y+C+ Cg+sF++ +L++H tH Rabbit4Lib 55 YRCN-LCGRSFRHGTSLTQHEVTH 77 zf-BED: domain 1 of 1, from 40 to 78: score -3.8, E = 7.3 *->SkvWkhFtkveeeedgkevegkakCkhCgkklsrkkksGTsnLirHL S + +h ++ + e+ +C++Cg+ + ++ ++L+ H Rabbit4Lib 40 SSLVQHQRIH-TGEKP------YRCNLCGRSFRHG-----TSLTQHE 74 rrkHp<-* H+ Rabbit4Lib 75 V-THS 78 zf-C2H2: domain 3 of 8, from 83 to 105: score 35.0, E = 1.7e-06 *->ykCpfdCgksFsrksnLkrHlrtH<-* ++C+ +Cgk+Fsr s+L +H rtH Rabbit4Lib 83 FQCK-ECGKAFSRCSSLVQHERTH 105 C1_1: domain 1 of 1, from 45 to 106: score -6.5, E = 1.4 *->HhFvhrwnfkqptfCdhCgell..........wgslgkqGlkCswCk H+ +h+ +p +C++Cg +++++++ ++++ + g ++C +C+ Rabbit4Lib 45 HQRIHT-G-EKPYRCNLCGRSFrhgtsltqheVTHSGEKPFQCKECG 89 lnvHkrChekVppeCgcg<-* + rC+++V e + Rabbit4Lib 90 KAF-SRCSSLVQHERTHT 106 [output cut off at A = 5 top alignments] // Query: Rabbit4Lib.910.C1 80 847 956 nseq=2; translated Scores for sequence family classification (score includes all domains): Model Description Score E-value N -------- ----------- ----- ------- --- [no hits above thresholds] Parsed for domains: Model Domain seq-f seq-t hmm-f hmm-t score E-value -------- ------- ----- ----- ----- ----- ----- ------- [no hits above thresholds] Alignments of top-scoring domains: [no hits above thresholds] // Query: Rabbit4Lib.911.C1 502 84 401 nseq=2; minus strand; translated Scores for sequence family classification (score includes all domains): Model Description Score E-value N -------- ----------- ----- ------- --- Thioredoxin Thioredoxin 143.2 4.6e-39 1 Glutaredoxin Glutaredoxin 16.9 0.014 1 Parsed for domains: Model Domain seq-f seq-t hmm-f hmm-t score E-value -------- ------- ----- ----- ----- ----- ----- ------- Glutaredoxin 1/1 24 86 .. 1 82 [] 16.9 0.014 Thioredoxin 1/1 2 105 .] 1 114 [] 143.2 4.6e-39 Alignments of top-scoring domains: Glutaredoxin: domain 1 of 1, from 24 to 86: score 16.9, E = 0.014 *->VvvftKGtperptCpfCkrakrlL.....dslgvkdkyeeidvdedp Vv f+ ++C+ Ck+ k +++ +++ ++v + e+dvd+ + Rabbit4Lib 24 VVDFSA-----TWCGPCKMIKPFFhalseKFNNVV--FIEVDVDDCQ 63 dGseireelkelsgakhreakegGwrTVPqvfarInGehi<-* +i++e + + +T+ q f +G+ + Rabbit4Lib 64 ---DIAAECEVK-----------CMPTF-QFF--KKGQKV 86 Thioredoxin: domain 1 of 1, from 2 to 105: score 143.2, E = 4.6e-39 *->vvvvltdenFdeevlkaksdkpVLVdFyApWCGpCKmlAPeyeklAq v + ++++F+e++ +a+ dk+V+VdF A+WCGpCKm+ P+++ l++ Rabbit4Lib 2 VKQIESKSAFQEVLDSAG-DKLVVVDFSATWCGPCKMIKPFFHALSE 47 eykgesddvkfaKVDaDenpkdlAskygVrgfPTlkffknGkkepvdyvg ++ +v+f +VD+D ++ d+A++++V+++PT++ffk+G+k v+++ Rabbit4Lib 48 KFN----NVVFIEVDVDDCQ-DIAAECEVKCMPTFQFFKKGQK--VGEFS 90 GArtkddLvafikkhlg<-* G ++k++L+a+i++ l Rabbit4Lib 91 G-ANKEKLEATINELL- 105 // Query: Rabbit4Lib.912.C1 331 1 490 nseq=2; minus strand; translated Scores for sequence family classification (score includes all domains): Model Description Score E-value N -------- ----------- ----- ------- --- A2M_recep A-macroglobulin receptor 135.5 9.3e-37 1 Parsed for domains: Model Domain seq-f seq-t hmm-f hmm-t score E-value -------- ------- ----- ----- ----- ----- ----- ------- A2M_recep 1/1 47 134 .. 1 97 [] 135.5 9.3e-37 Alignments of top-scoring domains: A2M_recep: domain 1 of 1, from 47 to 134: score 135.5, E = 9.3e-37 *->SnMaivdVkLlSGFspdkedLkkLslgvdvyliskyEidkalsedgk SnM+i+dVk++SGF++ k ++k +l+++ + + ++E++ ++ Rabbit4Lib 47 SNMVIADVKMVSGFIALKPTVK--MLERSDH-VNRTEVS-----TNH 85 VilYlDklsskeeeCfsFraeqtveVgnlqPAsVvVYDYYeperrctkfY V++YlDk+s+++ + +sF++ q+++V +l+PA V+VYDYYe++++++++Y Rabbit4Lib 86 VLIYLDKVSNQT-LSLSFTVVQEIPVIDLKPAIVKVYDYYETDEFAIAEY 134 <-* Rabbit4Lib - - // Query: Rabbit4Lib.915.C1 964 1 959 nseq=5; minus strand; translated Scores for sequence family classification (score includes all domains): Model Description Score E-value N -------- ----------- ----- ------- --- ATP-synt ATP synthase 432.4 4.1e-126 1 Parsed for domains: Model Domain seq-f seq-t hmm-f hmm-t score E-value -------- ------- ----- ----- ----- ----- ----- ------- ATP-synt 1/1 36 302 .. 1 321 [] 432.4 4.1e-126 Alignments of top-scoring domains: ATP-synt: domain 1 of 1, from 36 to 302: score 432.4, E = 4.1e-126 *->AsLkeIrdRIkSVKnTqKITKAMkMVAAsKlrRAQdrveaaRPYaek A+Lk+I++R+kS+Kn+qKITK MkMVAA+K++RA++++++aR Y Rabbit4Lib 36 ATLKDITRRLKSIKNIQKITKSMKMVAAAKYARAERELKPARVYGIG 82 ireVlgnlaagargekavdhPLLagrtpVKKvgiiViTsDRGLCGGyNsn +++++++ + a++ ++KK+++i ++sDRGLCG+++s+ Rabbit4Lib 83 SLALYEKADIK------------APE-DKKKHLLIGVSSDRGLCGAIHSS 119 viKkvenrikelkaqgkevkliliGkKGrsffkRrgpkpIiasitglgkd v+K+++++++ l+a gkev l+ +G+K+r +++R++++++ +++++g++ Rabbit4Lib 120 VAKQMKSEVAALTAAGKEVMLVGVGDKIRGILHRTHSDQFLVTFKEVGRK 169 qPtfeeaqgIAdelldlfaagefDevylvYNkFiSlisqepteqqLLPle +Ptf++a++IA ell++ +efDe ++++N+F+S+is++++e+++++l Rabbit4Lib 170 PPTFGDASVIALELLNSG--YEFDEGSIIFNRFKSVISYKTEEKPIFSLN 217 tieieqavGCvdAaedesfrlttkgGdFeVERetitddfstdyifEPspe ti ++es++ i+++ ++ Rabbit4Lib 218 TIA-----------SAESMS-----------------------IYDDVDA 233 eILdaLLprylesqiYrAllEsaASEqAARMtAMknAtDNAgdlIkkLtL ++L+++++++l+++iY++l Es++SEq+ARMtAM+nA++NA+++I+kLtL Rabbit4Lib 234 DVLQNYQEYNLANIIYYSLKESTTSEQSARMTAMDNASKNASEMIDKLTL 283 sYNRaRQAaITQEiiEIVsGAaAL<-* ++NR+RQA+IT+E+iEI+ L Rabbit4Lib 284 TFNRTRQAVITKELIEII-----L 302 // Query: Rabbit4Lib.916.C1 127 660 761 nseq=2; translated Scores for sequence family classification (score includes all domains): Model Description Score E-value N -------- ----------- ----- ------- --- [no hits above thresholds] Parsed for domains: Model Domain seq-f seq-t hmm-f hmm-t score E-value -------- ------- ----- ----- ----- ----- ----- ------- [no hits above thresholds] Alignments of top-scoring domains: [no hits above thresholds] // Query: Rabbit4Lib.918.C1 173 1 269 nseq=2; minus strand; translated Scores for sequence family classification (score includes all domains): Model Description Score E-value N -------- ----------- ----- ------- --- [no hits above thresholds] Parsed for domains: Model Domain seq-f seq-t hmm-f hmm-t score E-value -------- ------- ----- ----- ----- ----- ----- ------- [no hits above thresholds] Alignments of top-scoring domains: [no hits above thresholds] // Query: Rabbit4Lib.920.C1 787 1 751 nseq=2; minus strand; translated Scores for sequence family classification (score includes all domains): Model Description Score E-value N -------- ----------- ----- ------- --- [no hits above thresholds] Parsed for domains: Model Domain seq-f seq-t hmm-f hmm-t score E-value -------- ------- ----- ----- ----- ----- ----- ------- [no hits above thresholds] Alignments of top-scoring domains: [no hits above thresholds] // Query: Rabbit4Lib.921.C1 124 1 101 nseq=2; translated Scores for sequence family classification (score includes all domains): Model Description Score E-value N -------- ----------- ----- ------- --- [no hits above thresholds] Parsed for domains: Model Domain seq-f seq-t hmm-f hmm-t score E-value -------- ------- ----- ----- ----- ----- ----- ------- [no hits above thresholds] Alignments of top-scoring domains: [no hits above thresholds] // Query: Rabbit4Lib.922.C2 378 1 531 nseq=3; minus strand; translated Scores for sequence family classification (score includes all domains): Model Description Score E-value N -------- ----------- ----- ------- --- Arf ADP-ribosylation factor family 66.8 4.4e-16 1 Ras Ras family -58.1 0.00042 1 Parsed for domains: Model Domain seq-f seq-t hmm-f hmm-t score E-value -------- ------- ----- ----- ----- ----- ----- ------- Arf 1/1 2 141 .. 1 186 [] 66.8 4.4e-16 Ras 1/1 4 143 .. 1 174 [] -58.1 0.00042 Alignments of top-scoring domains: Arf: domain 1 of 1, from 2 to 141: score 66.8, E = 4.4e-16 *->gflkiflkllglwnKEmRILiLGLDnAGKTTILykLklgevvttiPT + ++ +iPT Rabbit4Lib 2 ------RVRFS------------------------------EDMIPT 12 iGFNvEtveyknvkFtvWDvGGQeslRPlWrnYfpnTdavIfVVDSaDrd +GFN +v+ +nv++++WD+GGQ + R+ W Y + ++a+++ +D+aDr+ Rabbit4Lib 13 VGFNMRKVTKGNVTIKIWDIGGQPRFRSMWERYCRGVNAIVYMIDAADRE 62 RieeakeELhaLLneeeLadaplLilANKQDlpgAlseaEireaLgLhel ie +++ELh+LL L++ p+L+l+NK Dlp+Al+e + e+++L+ + Rabbit4Lib 63 KIEASRNELHNLLDKPQLQGIPVLVLGNKRDLPNALDEKQLIEKMNLSAI 112 kgskgkVtlegdRpWeiqgcsAvkGeGLyEGldWLsnni<-* + R ++ s +++++ l+ + Rabbit4Lib 113 Q-D---------REICCYSISCKEKDNIDITLQXAYSTF 141 Ras: domain 1 of 1, from 4 to 143: score -58.1, E = 0.00042 *->KlVlvGDgGVGKSsLliRFtdnkFpeeYipTIGvDFytktvevdgkt +F+e+ ipT+ F + v+ ++ t Rabbit4Lib 4 ----------------------RFSEDMIPTV--GFNMRKVTKGNVT 26 vkLqIWDTAGQErFralrpaYYRgAqGfLLVYDITsrdSFenvkkWleei +k IWD GQ rFr++ + Y Rg ++++ + D +r e+++ + e+ Rabbit4Lib 27 IK--IWDIGGQPRFRSMWERYCRGVNAIVYMIDAADR---EKIEASRNEL 71 lrhad..kdenvpivLVGNKcDLedded.le.l.e.kqkRqVsteeGeal ++ d++ ++p++ +GNK DL ++ d++ +++ + ++ e Rabbit4Lib 72 HNLLDkpQLQGIPVLVLGNKRDLPNALDeKQlIeKmNL-SAIQDRE---- 116 AkelgAlpFmETSAKtneNVeeaFeelareilk<-* + + +S K+++N++ + + + + Rabbit4Lib 117 ------ICCYSISCKEKDNIDITLQXAYSTFKI 143 // Query: Rabbit4Lib.926.C1 169 958 1014 nseq=2; translated Scores for sequence family classification (score includes all domains): Model Description Score E-value N -------- ----------- ----- ------- --- [no hits above thresholds] Parsed for domains: Model Domain seq-f seq-t hmm-f hmm-t score E-value -------- ------- ----- ----- ----- ----- ----- ------- [no hits above thresholds] Alignments of top-scoring domains: [no hits above thresholds] // Query: Rabbit4Lib.927.C1 610 1 724 nseq=4; minus strand; translated Scores for sequence family classification (score includes all domains): Model Description Score E-value N -------- ----------- ----- ------- --- [no hits above thresholds] Parsed for domains: Model Domain seq-f seq-t hmm-f hmm-t score E-value -------- ------- ----- ----- ----- ----- ----- ------- [no hits above thresholds] Alignments of top-scoring domains: [no hits above thresholds] // Query: Rabbit4Lib.936.C1 362 1 587 nseq=2; minus strand; translated Scores for sequence family classification (score includes all domains): Model Description Score E-value N -------- ----------- ----- ------- --- PDZ PDZ domain (Also known as DHR or GLGF) 62.5 8.9e-15 1 Parsed for domains: Model Domain seq-f seq-t hmm-f hmm-t score E-value -------- ------- ----- ----- ----- ----- ----- ------- PDZ 1/1 3 86 .. 1 82 [] 62.5 8.9e-15 Alignments of top-scoring domains: PDZ: domain 1 of 1, from 3 to 86: score 62.5, E = 8.9e-15 *->evtlekevkrgglGfsikggsdk.....givvsevlpGsgaAeagGr ++k+ ++lG++++gg ++++ + +i++ +v pG g ++Gr Rabbit4Lib 3 ASGVQKD-PSESLGMTVAGGASHgewdlPIYIISVEPG-GVISRDGR 47 LkeGDqIlsvNGqdvenlsheravlalkgsggsevtLtil<-* +k GD++l vNG+d++ +s +av++lk++++ +v L +l Rabbit4Lib 48 IKTGDILLNVNGTDLTEVSRSEAVALLKSTSS-SVVLRVL 86 // Query: Rabbit4Lib.939.C1 341 1 298 nseq=2; translated Scores for sequence family classification (score includes all domains): Model Description Score E-value N -------- ----------- ----- ------- --- [no hits above thresholds] Parsed for domains: Model Domain seq-f seq-t hmm-f hmm-t score E-value -------- ------- ----- ----- ----- ----- ----- ------- [no hits above thresholds] Alignments of top-scoring domains: [no hits above thresholds] // Query: Rabbit4Lib.947.C1 347 1 820 nseq=2; minus strand; translated Scores for sequence family classification (score includes all domains): Model Description Score E-value N -------- ----------- ----- ------- --- [no hits above thresholds] Parsed for domains: Model Domain seq-f seq-t hmm-f hmm-t score E-value -------- ------- ----- ----- ----- ----- ----- ------- [no hits above thresholds] Alignments of top-scoring domains: [no hits above thresholds] // Query: Rabbit4Lib.949.C1 145 1 128 nseq=2; minus strand; translated Scores for sequence family classification (score includes all domains): Model Description Score E-value N -------- ----------- ----- ------- --- [no hits above thresholds] Parsed for domains: Model Domain seq-f seq-t hmm-f hmm-t score E-value -------- ------- ----- ----- ----- ----- ----- ------- [no hits above thresholds] Alignments of top-scoring domains: [no hits above thresholds] // Query: Rabbit4Lib.950.C1 139 1 121 nseq=2; translated Scores for sequence family classification (score includes all domains): Model Description Score E-value N -------- ----------- ----- ------- --- [no hits above thresholds] Parsed for domains: Model Domain seq-f seq-t hmm-f hmm-t score E-value -------- ------- ----- ----- ----- ----- ----- ------- [no hits above thresholds] Alignments of top-scoring domains: [no hits above thresholds] // Query: Rabbit4Lib.951.C2 282 117 539 nseq=4; minus strand; translated Scores for sequence family classification (score includes all domains): Model Description Score E-value N -------- ----------- ----- ------- --- Histone Core histone H2A/H2B/H3/H4 150.9 2.3e-41 1 CBFD_NFYB_HMF Histone-like transcription factor (CBF/ -1.0 1.2 1 Parsed for domains: Model Domain seq-f seq-t hmm-f hmm-t score E-value -------- ------- ----- ----- ----- ----- ----- ------- CBFD_NFYB_HMF 1/1 68 133 .. 1 66 [] -1.0 1.2 Histone 1/1 62 138 .. 1 77 [] 150.9 2.3e-41 Alignments of top-scoring domains: CBFD_NFYB_HMF: domain 1 of 1, from 68 to 133: score -1.0, E = 1.2 *->aeLPiArvkrIMKsdLpdagkiskdAkeliaecveeFiefiaseAae ++LP r r + +d + + + ++A ++e+ e ++ + + ++ Rabbit4Lib 68 RKLPFQRLVREIAQDFKTDLRFQSAAIGALQEASEAYLVGLFEDTNL 114 ickkekRKTikaehiklAv<-* + ++kR Ti++++i+lA Rabbit4Lib 115 CAIHAKRVTIMPKDIQLAR 133 Histone: domain 1 of 1, from 62 to 138: score 150.9, E = 2.3e-41 *->stdllilklpfsRvvRelkegfyaelRisskAlvalqealEdlleei st+lli+klpf+R+vRe++++f+++lR++s+A+ alqea+E++l+++ Rabbit4Lib 62 STELLIRKLPFQRLVREIAQDFKTDLRFQSAAIGALQEASEAYLVGL 108 ledAgllarhaKRvTitprDiqlAvRldge<-* +ed++l+a+haKRvTi+p+DiqlA+R++ge Rabbit4Lib 109 FEDTNLCAIHAKRVTIMPKDIQLARRIRGE 138 // Query: Rabbit4Lib.957.C1 338 95 493 nseq=3; minus strand; translated Scores for sequence family classification (score includes all domains): Model Description Score E-value N -------- ----------- ----- ------- --- Yippee Yippee putative zinc-binding protein 182.4 7.5e-51 1 Parsed for domains: Model Domain seq-f seq-t hmm-f hmm-t score E-value -------- ------- ----- ----- ----- ----- ----- ------- Yippee 1/1 1 87 [. 1 114 [] 182.4 7.5e-51 Alignments of top-scoring domains: Yippee: domain 1 of 1, from 1 to 87: score 182.4, E = 7.5e-51 *->mgRlFlkhlgarKNvgfrlYsCahCkThLavsseLISkdFrGktGrA +L+++seLIS++F+G+tGrA Rabbit4Lib 1 ---------------------------ILTNRSELISTRFTGATGRA 20 yLFkrVvNVvvGevEeRvMlTGrHtVrDIfCvnCntklGWKYEfAyeeSQ +LF++VvN++++ev++RvMlTGrH+VrD++C+nCn+klGW+YEfA+e+SQ Rabbit4Lib 21 FLFNKVVNLQYSEVQDRVMLTGRHMVRDVSCKNCNSKLGWIYEFATEDSQ 70 KYKEGkfILElanivkq<-* +YKEG++ILE+a+++++ Rabbit4Lib 71 RYKEGRVILERALVRES 87 // Query: Rabbit4Lib.960.C1 221 125 238 nseq=2; minus strand; translated Scores for sequence family classification (score includes all domains): Model Description Score E-value N -------- ----------- ----- ------- --- [no hits above thresholds] Parsed for domains: Model Domain seq-f seq-t hmm-f hmm-t score E-value -------- ------- ----- ----- ----- ----- ----- ------- [no hits above thresholds] Alignments of top-scoring domains: [no hits above thresholds] // Query: Rabbit4Lib.963.C1 68 36 279 nseq=2; minus strand; translated Scores for sequence family classification (score includes all domains): Model Description Score E-value N -------- ----------- ----- ------- --- DUF543 Domain of unknown function (DUF543) 62.5 9.2e-15 1 Parsed for domains: Model Domain seq-f seq-t hmm-f hmm-t score E-value -------- ------- ----- ----- ----- ----- ----- ------- DUF543 1/1 4 72 .. 1 81 [] 62.5 9.2e-15 Alignments of top-scoring domains: DUF543: domain 1 of 1, from 4 to 72: score 62.5, E = 9.2e-15 *->MstkpdsvrsEdevnekPvvsEEtRtiDrCLadsvlkvgvGGlliGi ++ + E++++ k +DrC+ad+v+k + + G Rabbit4Lib 4 GARVGNMS--ESDIGRK---------WDRCMADTVVKKVLX-FGLGV 38 vasvlFfRrrsWPIWlGlGvGlGvAYsdCsarfn<-* v s+ Ff ++ ++G+G GlG AYs+C+++f Rabbit4Lib 39 VFSLTFFXKKIVAFAFGSGMGLGMAYSNCQHDFQ 72 // Query: Rabbit4Lib.967.C1 611 1 650 nseq=3; minus strand; translated Scores for sequence family classification (score includes all domains): Model Description Score E-value N -------- ----------- ----- ------- --- Abhydrolase_1 alpha/beta hydrolase fold -6.6 0.046 1 Parsed for domains: Model Domain seq-f seq-t hmm-f hmm-t score E-value -------- ------- ----- ----- ----- ----- ----- ------- Abhydrolase_1 1/1 2 166 .. 1 235 [] -6.6 0.046 Alignments of top-scoring domains: Abhydrolase_1: domain 1 of 1, from 2 to 166: score -6.6, E = 0.046 *->frvillDlrGfGkSsrpkrgapdldeyrfddlaedlealldalglek + s + ++++ Rabbit4Lib 2 ------------HAS-------------------------AVFDYQL 11 pvnlvGhSmGGlialayaakyPelrvkalvlvgpvlpaglsaaltprqgn y+++ + ++ ++ ++ +++ Rabbit4Lib 12 ----------------YFQEPGV--------AEA---ELEQNLSRTL--K 32 tpglllanffnrllrsveallgradkqffllgrpfvsdflkqfeqwlssl + + +++ f+ + v + g+++ + p++s++++++e ++ + Rabbit4Lib 33 SFFRASDEGFL-TVHKVREMGGLFV---KTPANPSLSRIVTEEE--IQFY 76 irqgetdggdgllgaaaalgkllqwdls.alkdidvPtlviwgtdDplvp +q++ g+ g l+++++ ++++qw++ +a ++i++P+l++ +++Dp+ Rabbit4Lib 77 VQQFKKSGFRGPLNWYRNIERNWQWGCKgAGRKILIPALMVTAEKDPVLV 126 pdaseklaalipnaevvviddagHlaqlekpeevaeli.k<-* p++s ++++ip+ ++++i+d+gH++q+ekp ev++++++ Rabbit4Lib 127 PQMSKHMEEWIPHLKRGHIKDCGHWTQMEKPSEVNQILtE 166 // Query: Rabbit4Lib.969.C1 121 1 126 nseq=2; minus strand; translated Scores for sequence family classification (score includes all domains): Model Description Score E-value N -------- ----------- ----- ------- --- [no hits above thresholds] Parsed for domains: Model Domain seq-f seq-t hmm-f hmm-t score E-value -------- ------- ----- ----- ----- ----- ----- ------- [no hits above thresholds] Alignments of top-scoring domains: [no hits above thresholds] // Query: Rabbit4Lib.971.C1 439 1 280 nseq=2; minus strand; translated Scores for sequence family classification (score includes all domains): Model Description Score E-value N -------- ----------- ----- ------- --- [no hits above thresholds] Parsed for domains: Model Domain seq-f seq-t hmm-f hmm-t score E-value -------- ------- ----- ----- ----- ----- ----- ------- [no hits above thresholds] Alignments of top-scoring domains: [no hits above thresholds] // Query: Rabbit4Lib.977.C1 63 1 52 nseq=2; translated Scores for sequence family classification (score includes all domains): Model Description Score E-value N -------- ----------- ----- ------- --- [no hits above thresholds] Parsed for domains: Model Domain seq-f seq-t hmm-f hmm-t score E-value -------- ------- ----- ----- ----- ----- ----- ------- [no hits above thresholds] Alignments of top-scoring domains: [no hits above thresholds] // Query: Rabbit4Lib.980.C1 627 378 769 nseq=2; minus strand; translated Scores for sequence family classification (score includes all domains): Model Description Score E-value N -------- ----------- ----- ------- --- [no hits above thresholds] Parsed for domains: Model Domain seq-f seq-t hmm-f hmm-t score E-value -------- ------- ----- ----- ----- ----- ----- ------- [no hits above thresholds] Alignments of top-scoring domains: [no hits above thresholds] // Query: Rabbit4Lib.982.C1 482 1 647 nseq=2; minus strand; translated Scores for sequence family classification (score includes all domains): Model Description Score E-value N -------- ----------- ----- ------- --- EFG_C Elongation factor G C-terminus 101.9 1.2e-26 1 EFG_IV Elongation factor G, domain IV 14.0 0.00012 1 Parsed for domains: Model Domain seq-f seq-t hmm-f hmm-t score E-value -------- ------- ----- ----- ----- ----- ----- ------- EFG_IV 1/1 20 110 .. 1 124 [] 14.0 0.00012 EFG_C 1/1 112 197 .. 1 93 [] 101.9 1.2e-26 Alignments of top-scoring domains: EFG_IV: domain 1 of 1, from 20 to 110: score 14.0, E = 0.00012 *->pqVayrETIrkdvkereykhkkQsGgdgqyakviiriePlpgggneF qVayrETI v + +e+ Rabbit4Lib 20 LQVAYRETILSAVR-VT--------------------------VIEY 39 vdetkGvGgqiPkEyipavekGfreamkeGpLaGepvvdvkvtLvDGsyH +++ i+k ++a+e G++ a+ +GpL G pv dv vtL+ H Rabbit4Lib 40 AEDIS---EDILKTSQEAIENGIHMACLQGPLLGSPVQDVTVTLHSLITH 86 eDAVdSseaaFkpAarrAfkeAllkAk<-* + S+ + + + +r++ +Al+kA+ Rabbit4Lib 87 P--GTSTTM-ISACVSRCIQKALKKAD 110 EFG_C: domain 1 of 1, from 112 to 197: score 101.9, E = 1.2e-26 *->vlLEPimkveIivPeeylGaViglLnkRRGqildmeyrgggaPlrvr ++LEP m++e++v eyl++V ++L +RRG i+++++r ++ rv Rabbit4Lib 112 QVLEPLMNLEVTVTREYLSPVLADLAQRRGNIQEIQTRQDN---RV- 154 ikaevPlaEmfGDFatdLrSlTqGrAsfsmeFdhYepvpgviadel<-* +++ vPlaE+ G ++t Lr+lT+G A+f e++ Y+ +++ +d+ Rabbit4Lib 155 VIGFVPLAEIMG-YSTVLRTLTSGSATFALELSTYQAMNP--QDQX 197 // Query: Rabbit4Lib.983.C1 10 1 183 nseq=3; minus strand; translated Scores for sequence family classification (score includes all domains): Model Description Score E-value N -------- ----------- ----- ------- --- [no hits above thresholds] Parsed for domains: Model Domain seq-f seq-t hmm-f hmm-t score E-value -------- ------- ----- ----- ----- ----- ----- ------- [no hits above thresholds] Alignments of top-scoring domains: [no hits above thresholds] // Query: Rabbit4Lib.984.C1 593 1 732 nseq=4; minus strand; translated Scores for sequence family classification (score includes all domains): Model Description Score E-value N -------- ----------- ----- ------- --- OSCP ATP synthase delta (OSCP) subunit 207.3 2.4e-58 1 Parsed for domains: Model Domain seq-f seq-t hmm-f hmm-t score E-value -------- ------- ----- ----- ----- ----- ----- ------- OSCP 1/1 45 216 .. 1 176 [] 207.3 2.4e-58 Alignments of top-scoring domains: OSCP: domain 1 of 1, from 45 to 216: score 207.3, E = 2.4e-58 *->VArrYAeALfelAvennsldqieedLrslkevlaespelaelLsnPl V++rYA+AL+++A ++n+l+q+e++L l+e ae + + ++ nP+ Rabbit4Lib 45 VEGRYATALYSAASKQNKLEQVEKEL--LRERNAEGTQIGGFFLNPY 89 isredKkalikaifgeaklspivlNFLllLvenrRisalpeIideFlelv ++r+ K +++++i +++ +sp++ N+ +lL+en+R+ + ++i++F ++ Rabbit4Lib 90 VKRAVKMKSLNDITAKERFSPLTANLMNLLAENGRLRNAQGVISAFSTMM 139 naargtvdaeVtSAipLteeqlaaLaeklkkktgqakkVkLetkVDpsLI ++rg+v ++Vt+A pL+e+ l +L+++lk+++ q++ +kLe+k D ++ Rabbit4Lib 140 SVHRGEVPCTVTTASPLEEATLSELKTVLKSFLSQGQVLKLEVKTDXVVM 189 GGliVriGrGskviDgSvrgkLerlarqL<-* GG+iVriG +k++D+S ++k+++l++++ Rabbit4Lib 190 GGMIVRIG--EKYVDMSAKTKIQKLSKAM 216 // Query: Rabbit4Lib.984.C2 184 1 290 nseq=2; minus strand; translated Scores for sequence family classification (score includes all domains): Model Description Score E-value N -------- ----------- ----- ------- --- OSCP ATP synthase delta (OSCP) subunit -71.0 0.61 1 Parsed for domains: Model Domain seq-f seq-t hmm-f hmm-t score E-value -------- ------- ----- ----- ----- ----- ----- ------- OSCP 1/1 1 72 [. 1 176 [] -71.0 0.61 Alignments of top-scoring domains: OSCP: domain 1 of 1, from 1 to 72: score -71.0, E = 0.61 *->VArrYAeALfelAvennsldqieedLrslkevlaespelaelLsnPl + a Rabbit4Lib 1 -----------------------------XHASA------------- 5 isredKkalikaifgeaklspivlNFLllLvenrRisalpeIideFlelv + +g+ Rabbit4Lib 6 -----------DXVGS---------------------------------- 10 naargtvdaeVtSAipLteeqlaaLaeklkkktgqakkVkLetkVDpsLI pL+e+ l +L+++lk+++ q++ +kLe+k D ++ Rabbit4Lib 11 ---------------PLEEATLSELKTVLKSFLSQGQVLKLEVKTDXVVM 45 GGliVriGrGskviDgSvrgkLerlarqL<-* GG+iVriG +k++D+S ++k+++l++++ Rabbit4Lib 46 GGMIVRIG--EKYVDMSAKTKIQKLSKAM 72 // Query: Rabbit4Lib.990.C1 356 59 505 nseq=3; minus strand; translated Scores for sequence family classification (score includes all domains): Model Description Score E-value N -------- ----------- ----- ------- --- Lys C-type lysozyme/alpha-lactalbumin fam 330.8 1.6e-95 1 Transglycosylas Transglycosylase-like domain -18.4 3.8 1 Parsed for domains: Model Domain seq-f seq-t hmm-f hmm-t score E-value -------- ------- ----- ----- ----- ----- ----- ------- Transglycosylas 1/1 40 131 .. 1 80 [] -18.4 3.8 Lys 1/1 19 146 .. 1 128 [] 330.8 1.6e-95 Alignments of top-scoring domains: Transglycosylas: domain 1 of 1, from 40 to 131: score -18.4, E = 3.8 *->aadastWdaiAqCESgGnwhaiNtGnG....ayGGLfQfsqsTWeay +++ ++W +A ES n a N G++++ yG + Q+ + W Rabbit4Lib 40 GVSLANWMCLAKWESSYNTRATNYNPGdkstDYGIF-QINSRYWCND 85 GGteYapsAaqAsr...........eqQIavAeklyaa.QGlgAWPvCg< G t p+A +A + ++ +++ q +a A ++ +QG++AW++ Rabbit4Lib 86 GKT---PRAVNACHipcsdllkddiTQAVACAKRVVSDpQGIRAWVAWR 131 -* Rabbit4Lib - - Lys: domain 1 of 1, from 19 to 146: score 330.8, E = 1.6e-95 *->KvftRCeLareLkrlGmDGYrgisLanWvClafheSgYnTqAtnnNn K+++RCeLar+Lk+lG+DGY+g+sLanW+Cla++eS+YnT+Atn+N+ Rabbit4Lib 19 KIYERCELARTLKKLGLDGYKGVSLANWMCLAKWESSYNTRATNYNP 65 gngStDYGIFQINskyWCndgktpgSkNaCgIsCskLLdDDItddiaCAK g+ StDYGIFQINs+yWCndgktp+++NaC+I+Cs LL DDIt+++aCAK Rabbit4Lib 66 GDKSTDYGIFQINSRYWCNDGKTPRAVNACHIPCSDLLKDDITQAVACAK 115 KIlrdpqGidaWvAWknhCsgedLsqyvrgC<-* ++++dpqGi+aWvAW+nhC+++dL y+rgC Rabbit4Lib 116 RVVSDPQGIRAWVAWRNHCQNQDLTPYIRGC 146 // Query: Rabbit4Lib.991.C1 774 54 1049 nseq=2; minus strand; translated Scores for sequence family classification (score includes all domains): Model Description Score E-value N -------- ----------- ----- ------- --- MPPN MPPN (rrm-like) domain 152.3 8.6e-42 1 Parsed for domains: Model Domain seq-f seq-t hmm-f hmm-t score E-value -------- ------- ----- ----- ----- ----- ----- ------- MPPN 1/1 167 252 .. 1 143 [] 152.3 8.6e-42 Alignments of top-scoring domains: MPPN: domain 1 of 1, from 167 to 252: score 152.3, E = 8.6e-42 *->gekedsdtwsdlsAVtVFGFPpsitnlvLlhFsrfGeIvshvrvlks +e+ ++dtw VtVFGFP+++++++Ll+F+++G+I++hv Rabbit4Lib 167 SEDHLDDTW-----VTVFGFPQASASYILLQFAQYGNILKHV----- 203 skglnpktfRiFHnHDtGCDEnDstvnksitLksksneltakKYpiptng +++ g Rabbit4Lib 204 ---------------------------------------------MSNTG 208 NWmhltYssrssAaKALskNGtiingsvivGVkyspatdKqvinkk<-* Wmh+ Y+s+++A+KALsk+G+i+++s+++GVk++ +d +v++ + Rabbit4Lib 209 XWMHIHYQSKLQARKALSKDGRIFGESIMIGVKPC--IDXSVMENS 252 // Query: Rabbit4Lib.993.C1 27 1 229 nseq=3; minus strand; translated Scores for sequence family classification (score includes all domains): Model Description Score E-value N -------- ----------- ----- ------- --- [no hits above thresholds] Parsed for domains: Model Domain seq-f seq-t hmm-f hmm-t score E-value -------- ------- ----- ----- ----- ----- ----- ------- [no hits above thresholds] Alignments of top-scoring domains: [no hits above thresholds] // Query: Rabbit4Lib.994.C1 784 1 940 nseq=2; minus strand; translated Scores for sequence family classification (score includes all domains): Model Description Score E-value N -------- ----------- ----- ------- --- DUF827 Plant protein of unknown function (DUF827) -132.4 9.6 1 Parsed for domains: Model Domain seq-f seq-t hmm-f hmm-t score E-value -------- ------- ----- ----- ----- ----- ----- ------- DUF827 1/1 74 283 .. 1 551 [] -132.4 9.6 Alignments of top-scoring domains: DUF827: domain 1 of 1, from 74 to 283: score -132.4, E = 9.6 *->sAPFeSVKEAVtl.FGgiafWKahyatRLkklqsserrktvsfedVs AV+++FG f + + q++ r+ +v Rabbit4Lib 74 ---------AVSMgFGH--FYGTI--------QIQKRQQLV------ 95 deetELekvqkeapelKkeLenaEreklqVLkELEsTKrtveeLklkLEk k+++ +EL + +k+ Rabbit4Lib 96 ------RKIHE--------------------DELND---------MKD-- 108 aekeeqqAkqdsElAklRvEEmEqGiadeASVaaktqlEVAkEryisats Rabbit4Lib - -------------------------------------------------- - ELdsvKeELekvrqeynslleEKdlAlkrAEEAvlaskvvekkveeLtkE L +qe +s ++ K l Rabbit4Lib 109 -------YLSQCQQEQDSFIDYKSL------------------------- 126 liAtKeslEsahaaHleAeEerigiamekdqdreayekelkeAeeeLqrL +E +++ +++ ++e+e+k + e q L Rabbit4Lib 127 ------------------KENLAEVLDPTEAEKMSFETEKKNLATENQYL 158 nqeldpELkkDlkakLdeasaeledLkeElaaykeSkikeEaevieeege ++ l+ + Rabbit4Lib 159 RMSLEK------E------------------------------------- 165 iaaqesshdimssvasitkELeeAKmnLeKaaeEekslrslveS..LkqE ++++s++ EL ++ + ++E s + e ++Lk+ Rabbit4Lib 166 ----------EKALSSLQEELRKLREQIRMLEDEGASTELITENqkLKEI 205 LeeeKaelee.lrqREgeasiavaSLeaELsRtksEIelvkskEkearEe Le+eK++ ++ l+q+E+ Rabbit4Lib 206 LEDEKQKTQSfLKQKETV-------------------------------- 223 kmvElpkklqqasrEAeeaKkeAenareelrkakeEaEqaktalstaEkr aE+++ + + a++r Rabbit4Lib 224 -----------------------------------LAEAKMLKRELAKER 238 LvaArKeiEaAKaaEklAi.aeIKaLqeseesqkndeiesSprsItisle A+++e++ L++s++ + d Rabbit4Lib 239 MI-------------SMALrEELQQLSSSQSQGNSD-------------- 261 EyeeLskraeEaEelvnfrvaealaqvEeakeseseiLeKLEeaekeiee s++ eK ke+ + Rabbit4Lib 262 --------------------------------SPNVLTEK-----KEVAV 274 kKaaleeAl<-* +++ l+e Rabbit4Lib 275 LRERLTELE 283 // Query: Rabbit4Lib.997.C1 634 1 749 nseq=4; minus strand; translated Scores for sequence family classification (score includes all domains): Model Description Score E-value N -------- ----------- ----- ------- --- NUDIX NUDIX domain 86.2 6.7e-22 1 Parsed for domains: Model Domain seq-f seq-t hmm-f hmm-t score E-value -------- ------- ----- ----- ----- ----- ----- ------- NUDIX 1/1 88 227 .. 1 133 [] 86.2 6.7e-22 Alignments of top-scoring domains: NUDIX: domain 1 of 1, from 88 to 227: score 86.2, E = 6.7e-22 *->rrravgvvllnedg....evLLvrrsrpp..pglWelPGGgvepGEs +v+v+++ ++ + + ++Lv+++rpp ++ ++e+P+G +++GEs Rabbit4Lib 88 SADGVAVIPVLQRTlhyeCIVLVKQFRPPmgGYCLEFPAGLIDDGES 134 peeAAvREleEEtGlrvedsvvllvlllgvleypap.rd..vvhvflael pe+AA+REleEEtG++ ++ + ++p+ ++ ++h++++++ Rabbit4Lib 135 PEAAALRELEEETGYK------GDIAECSPAVCMDPgLSncTTHIVTVTI 178 .gge.epqpdpg.....EvaevrWvpleellalllageireiakvialll +g++ e+ ++ ++++++E+ ev +p ++ll++l+a e ++ Rabbit4Lib 179 nGDDaENVRPKPkpgegEFVEVISLPKNDLLKRLDALIAEE---HLTVDA 225 al<-* + Rabbit4Lib 226 RV 227 // Query: Rabbit4Lib.998.C1 603 146 539 nseq=6; minus strand; translated Scores for sequence family classification (score includes all domains): Model Description Score E-value N -------- ----------- ----- ------- --- PAM2 Ataxin-2 C-terminal region 32.7 8.2e-06 1 Parsed for domains: Model Domain seq-f seq-t hmm-f hmm-t score E-value -------- ------- ----- ----- ----- ----- ----- ------- PAM2 1/1 112 129 .. 1 18 [] 32.7 8.2e-06 Alignments of top-scoring domains: PAM2: domain 1 of 1, from 112 to 129: score 32.7, E = 8.2e-06 *->kkkskLNPnAkEFVPssk<-* + ks LNPnAkEFVP++k Rabbit4Lib 112 VVKSNLNPNAKEFVPGVK 129 // Query: Rabbit4Lib.1006.C1 192 1 271 nseq=3; minus strand; translated Scores for sequence family classification (score includes all domains): Model Description Score E-value N -------- ----------- ----- ------- --- [no hits above thresholds] Parsed for domains: Model Domain seq-f seq-t hmm-f hmm-t score E-value -------- ------- ----- ----- ----- ----- ----- ------- [no hits above thresholds] Alignments of top-scoring domains: [no hits above thresholds] // Query: Rabbit4Lib.1008.C1 310 242 940 nseq=3; translated Scores for sequence family classification (score includes all domains): Model Description Score E-value N -------- ----------- ----- ------- --- [no hits above thresholds] Parsed for domains: Model Domain seq-f seq-t hmm-f hmm-t score E-value -------- ------- ----- ----- ----- ----- ----- ------- [no hits above thresholds] Alignments of top-scoring domains: [no hits above thresholds] // Query: Rabbit4Lib.1010.C1 357 1 432 nseq=2; minus strand; translated Scores for sequence family classification (score includes all domains): Model Description Score E-value N -------- ----------- ----- ------- --- Complex1_LYR Complex 1 protein (LYR family) 96.0 7.3e-25 1 Parsed for domains: Model Domain seq-f seq-t hmm-f hmm-t score E-value -------- ------- ----- ----- ----- ----- ----- ------- Complex1_LYR 1/1 31 99 .. 1 70 [] 96.0 7.3e-25 Alignments of top-scoring domains: Complex1_LYR: domain 1 of 1, from 31 to 99: score 96.0, E = 7.3e-25 *->eaRrrVLsLYRrlLRatrkwsvsfypdynareylrrkiRdeFrkNkn ea+rrV+ LYR+++R++++ v+ ++++ ++++ r+k+R++F+kN++ Rabbit4Lib 31 EAKRRVRELYRAWYREVPNT-VHLFQLDITVKQGRDKVREMFMKNAH 76 vtDpdkIdrLiaeGeeelkelrh<-* vtDp+++d L+++G++el+e+++ Rabbit4Lib 77 VTDPRVVDLLVIKGKMELEETIK 99 // Query: Rabbit4Lib.1011.C1 205 104 229 nseq=2; translated Scores for sequence family classification (score includes all domains): Model Description Score E-value N -------- ----------- ----- ------- --- [no hits above thresholds] Parsed for domains: Model Domain seq-f seq-t hmm-f hmm-t score E-value -------- ------- ----- ----- ----- ----- ----- ------- [no hits above thresholds] Alignments of top-scoring domains: [no hits above thresholds] // Query: Rabbit4Lib.1013.C1 606 1 697 nseq=2; minus strand; translated Scores for sequence family classification (score includes all domains): Model Description Score E-value N -------- ----------- ----- ------- --- SGS SGS domain 197.1 2.8e-55 1 CS CS domain 155.3 1.1e-42 1 CsbD CsbD-like -17.0 8.5 1 Parsed for domains: Model Domain seq-f seq-t hmm-f hmm-t score E-value -------- ------- ----- ----- ----- ----- ----- ------- CS 1/1 36 123 .. 1 103 [] 155.3 1.1e-42 CsbD 1/1 147 192 .. 1 53 [] -17.0 8.5 SGS 1/1 150 231 .] 1 91 [] 197.1 2.8e-55 Alignments of top-scoring domains: CS: domain 1 of 1, from 36 to 123: score 155.3, E = 1.1e-42 *->skfRyDWyQTeseVvItvYaKnvlpenvniefssnDRktLsVsiqVF sk++yDWyQTes+V It+++Knv++++vn+efs+ k+Ls+++ Rabbit4Lib 36 SKIKYDWYQTESQVIITLMIKNVQKNDVNVEFSE---KELSAVV--- 76 kheFGneefqlqlkLwgeIipiHiLHvqEkssvkvlstvKVEItLkKaep k + ++e+++l+l+L+++Iip E+s++kvlst K+EI++kK+e+ Rabbit4Lib 77 KPP-SGEDYNLKLRLLHPIIP-------EQSTFKVLST-KIEIKMKKPEA 117 isWesL<-* ++We+L Rabbit4Lib 118 VRWEKL 123 CsbD: domain 1 of 1, from 147 to 192: score -17.0, E = 8.5 *->dkieGkadqakGkvKEaaGkaTGdkkleaEGkaeKakGKa......q + ++d+++G++KE E k eK+ G+a ++ q Rabbit4Lib 147 SHYTRNWDKLVGEIKE-------------EEKNEKLEGDAalnklfQ 180 ekvgdaKDkVkd<-* + + d D+Vk+ Rabbit4Lib 181 QIYSDGSDEVKR 192 SGS: domain 1 of 1, from 150 to 231: score 197.1, E = 2.8e-55 *->kKnWDkLtaveKrlkevkKEekiseDEkldGdaALnnlFkklYeDgD ++nWDkL+ e+k+Eek +Ekl+GdaALn+lF+++Y+Dg+ Rabbit4Lib 150 TRNWDKLVG------EIKEEEK---NEKLEGDAALNKLFQQIYSDGS 187 demkRAMmKSftESnGTvLSTNWkDVgkkkVetkPPeGMEpKew<-* de+kRAM+KSf+ES+GTvLSTNW+DVgk+kVe++PP++ME+K++ Rabbit4Lib 188 DEVKRAMNKSFMESGGTVLSTNWSDVGKRKVEINPPDDMEWKKY 231 // Query: Rabbit4Lib.1014.C1 36 1 58 nseq=2; minus strand; translated Scores for sequence family classification (score includes all domains): Model Description Score E-value N -------- ----------- ----- ------- --- [no hits above thresholds] Parsed for domains: Model Domain seq-f seq-t hmm-f hmm-t score E-value -------- ------- ----- ----- ----- ----- ----- ------- [no hits above thresholds] Alignments of top-scoring domains: [no hits above thresholds] // Query: Rabbit4Lib.1016.C1 498 1 868 nseq=4; minus strand; translated Scores for sequence family classification (score includes all domains): Model Description Score E-value N -------- ----------- ----- ------- --- Mov34 Mov34/MPN/PAD-1 family 166.7 3.8e-46 1 Parsed for domains: Model Domain seq-f seq-t hmm-f hmm-t score E-value -------- ------- ----- ----- ----- ----- ----- ------- Mov34 1/1 5 119 .. 1 120 [] 166.7 3.8e-46 Alignments of top-scoring domains: Mov34: domain 1 of 1, from 5 to 119: score 166.7, E = 3.8e-46 *->ssvrtvkihplvllkildhaerggpskeevmGlLlGklegdgrviev ++++ ki++l+llk++ ha++gg+ evmGl+lGk++g+ + ++ Rabbit4Lib 5 DYFKYCKISALALLKMVMHARSGGNL--EVMGLMLGKVDGE--TMII 47 tnvFalpqeeteddvdaveldqeymekmlemlkkvngrgeevVGWYHSHP +++Falp+e+te++v+a++ ++eym +++e +k+v gr e+ +GWYHSHP Rabbit4Lib 48 MDSFALPVEGTETRVNAQAAAYEYMAAYIENAKQV-GRLENAIGWYHSHP 96 glgcwlSevDvhtqelyqryipe<-* g+gcwlS++Dv+tq l+q+++++ Rabbit4Lib 97 GYGCWLSGIDVSTQMLNQQFQEP 119 // Query: Rabbit4Lib.1019.C1 382 1 628 nseq=2; minus strand; translated Scores for sequence family classification (score includes all domains): Model Description Score E-value N -------- ----------- ----- ------- --- DJ-1_PfpI DJ-1/PfpI family 101.4 1.7e-26 1 Parsed for domains: Model Domain seq-f seq-t hmm-f hmm-t score E-value -------- ------- ----- ----- ----- ----- ----- ------- DJ-1_PfpI 1/1 52 193 .. 1 189 [] 101.4 1.7e-26 Alignments of top-scoring domains: DJ-1_PfpI: domain 1 of 1, from 52 to 193: score 101.4, E = 1.7e-26 *->evtvvspekgkgdcvevkgkrgggaqyekggvkvtvdkslddvnpdd +vtv++ + + +v +++ +d+sl+d++ + Rabbit4Lib 52 KVTVAGLAGKD----PVQLAVT---------LSFXPDASLEDAKKEG 85 aAaYDalvlPGGhagaedLradAeckseklvkfvkefaesgkpiaAIChG + YD++vlPGG+ ga +L+ +s ++ +++ke+ +++++iaAIC Rabbit4Lib 86 P--YDVVVLPGGNLGAQNLS-----ESAAVKEILKEQEKRKGLIAAICQV 128 PavlLaaagllksvvgGkrvTsfpsvkekkmgvmellknagaeyvdedep P l+ + G +vT++p +k+k ++k+ ++y + + Rabbit4Lib 129 P-RLCWLMRXGF----GSKVTTHPLAKDK------MMKGVXYSYSE--SR 165 VvgafvdgnepndFvitDGklvTsagpgsafeFalelleaLa<-* V +dg ++Ts+ g+ + l+++eaL Rabbit4Lib 166 VE---RDG-----------LILTSRXSGDQLRVPLAIVEALS 193 // Query: Rabbit4Lib.1020.C2 277 188 432 nseq=2; minus strand; translated Scores for sequence family classification (score includes all domains): Model Description Score E-value N -------- ----------- ----- ------- --- [no hits above thresholds] Parsed for domains: Model Domain seq-f seq-t hmm-f hmm-t score E-value -------- ------- ----- ----- ----- ----- ----- ------- [no hits above thresholds] Alignments of top-scoring domains: [no hits above thresholds] // Query: Rabbit4Lib.1025.C1 79 426 515 nseq=2; translated Scores for sequence family classification (score includes all domains): Model Description Score E-value N -------- ----------- ----- ------- --- [no hits above thresholds] Parsed for domains: Model Domain seq-f seq-t hmm-f hmm-t score E-value -------- ------- ----- ----- ----- ----- ----- ------- [no hits above thresholds] Alignments of top-scoring domains: [no hits above thresholds] // Query: Rabbit4Lib.1030.C1 635 1 499 nseq=2; minus strand; translated Scores for sequence family classification (score includes all domains): Model Description Score E-value N -------- ----------- ----- ------- --- GST_C Glutathione S-transferase, C-terminal domain 74.8 1.8e-18 1 Parsed for domains: Model Domain seq-f seq-t hmm-f hmm-t score E-value -------- ------- ----- ----- ----- ----- ----- ------- GST_C 1/1 31 136 .. 1 111 [] 74.8 1.8e-18 Alignments of top-scoring domains: GST_C: domain 1 of 1, from 31 to 136: score 74.8, E = 1.8e-18 *->aerarwdmiedsrfrdlrldaawlpygkpefaekdeeeveealekll +er +dm++++++ l+l ++++++++++ +++e v a +++ Rabbit4Lib 31 KERTLIDMYVEGTLDLLELLIMHPFLKPDD--QQRE-VVNMAQKAII 74 kvlealeeeLkghgkkylvGdkltlADialfpaldwlerldpdplwreey ++++++e+ L+ghg+ +lvG++l+lAD+ l+ ++ le+ p++l +++ Rabbit4Lib 75 RYFPVFEKILRGHGQSFLVGNQLSLADVILLQTILALEEKIPNIL--SAF 122 PnLkawrkrvaarp<-* P L+ + ++++ p Rabbit4Lib 123 PFLQEYTVKISNIP 136 // Query: Rabbit4Lib.1035.C1 265 417 911 nseq=2; translated Scores for sequence family classification (score includes all domains): Model Description Score E-value N -------- ----------- ----- ------- --- [no hits above thresholds] Parsed for domains: Model Domain seq-f seq-t hmm-f hmm-t score E-value -------- ------- ----- ----- ----- ----- ----- ------- [no hits above thresholds] Alignments of top-scoring domains: [no hits above thresholds] // Query: Rabbit4Lib.1036.C1 979 1 703 nseq=2; minus strand; translated Scores for sequence family classification (score includes all domains): Model Description Score E-value N -------- ----------- ----- ------- --- IGFBP Insulin-like growth factor binding pr 59.0 1e-13 1 Thyroglobulin_1 Thyroglobulin type-1 repeat 20.0 0.00055 1 Parsed for domains: Model Domain seq-f seq-t hmm-f hmm-t score E-value -------- ------- ----- ----- ----- ----- ----- ------- IGFBP 1/1 28 86 .. 1 84 [] 59.0 1e-13 Thyroglobulin_1 1/1 193 235 .] 1 81 [] 20.0 0.00055 Alignments of top-scoring domains: IGFBP: domain 1 of 1, from 28 to 86: score 59.0, E = 1e-13 *->CprPcGGpCpaerlarCpPgPpvaPpaecaelvredGCGCClvCArq C+ pC++++l++CpP+P ++elv+e+ A++ Rabbit4Lib 28 CE-----PCDEKALSMCPPSP------LGCELVKEPXLRLLHDFALA 63 eGeaCGvytPrDeskGLyCarGaedaakaLrCrpppG<-* eG++CGvyt+r Ca+G LrC p+++ Rabbit4Lib 64 EGQSCGVYTER-------CAQG-------LRCLPRQD 86 Thyroglobulin_1: domain 1 of 1, from 193 to 235: score 20.0, E = 0.00055 *->CqrelervleslaaeqlkteehlesprglYvPnCdenGfYkpvQCdp C+r++e+ l++l+a++ +++pr +Y+PnCd++GfYk++QC+p Rabbit4Lib 193 CRRHMEASLQELKASP------RMVPRAVYLPNCDRKGFYKRKQCKP 233 SlggqrGeCWCVDaetGkelpGtrdvgGetPprC<-* + Rabbit4Lib 234 -------------SX------------------- 235 // Query: Rabbit4Lib.1036.C2 1073 58 766 nseq=2; minus strand; translated Scores for sequence family classification (score includes all domains): Model Description Score E-value N -------- ----------- ----- ------- --- IGFBP Insulin-like growth factor binding pr 59.0 1e-13 1 Thyroglobulin_1 Thyroglobulin type-1 repeat 20.0 0.00055 1 Parsed for domains: Model Domain seq-f seq-t hmm-f hmm-t score E-value -------- ------- ----- ----- ----- ----- ----- ------- IGFBP 1/1 30 88 .. 1 84 [] 59.0 1e-13 Thyroglobulin_1 1/1 195 237 .] 1 81 [] 20.0 0.00055 Alignments of top-scoring domains: IGFBP: domain 1 of 1, from 30 to 88: score 59.0, E = 1e-13 *->CprPcGGpCpaerlarCpPgPpvaPpaecaelvredGCGCClvCArq C+ pC++++l++CpP+P ++elv+e+ A++ Rabbit4Lib 30 CE-----PCDEKALSMCPPSP------LGCELVKEPXLRLLHDFALA 65 eGeaCGvytPrDeskGLyCarGaedaakaLrCrpppG<-* eG++CGvyt+r Ca+G LrC p+++ Rabbit4Lib 66 EGQSCGVYTER-------CAQG-------LRCLPRQD 88 Thyroglobulin_1: domain 1 of 1, from 195 to 237: score 20.0, E = 0.00055 *->CqrelervleslaaeqlkteehlesprglYvPnCdenGfYkpvQCdp C+r++e+ l++l+a++ +++pr +Y+PnCd++GfYk++QC+p Rabbit4Lib 195 CRRHMEASLQELKASP------RMVPRAVYLPNCDRKGFYKRKQCKP 235 SlggqrGeCWCVDaetGkelpGtrdvgGetPprC<-* + Rabbit4Lib 236 -------------SX------------------- 237 // Query: Rabbit4Lib.1041.C1 401 260 411 nseq=2; minus strand; translated Scores for sequence family classification (score includes all domains): Model Description Score E-value N -------- ----------- ----- ------- --- [no hits above thresholds] Parsed for domains: Model Domain seq-f seq-t hmm-f hmm-t score E-value -------- ------- ----- ----- ----- ----- ----- ------- [no hits above thresholds] Alignments of top-scoring domains: [no hits above thresholds] // Query: Rabbit4Lib.1042.C1 828 1 1062 nseq=2; minus strand; translated Scores for sequence family classification (score includes all domains): Model Description Score E-value N -------- ----------- ----- ------- --- Atrophin-1 Atrophin-1 family -75.5 5.3e-12 1 E-MAP-115 E-MAP-115 family -99.1 4.2 1 Parsed for domains: Model Domain seq-f seq-t hmm-f hmm-t score E-value -------- ------- ----- ----- ----- ----- ----- ------- E-MAP-115 1/1 32 173 .. 1 193 [] -99.1 4.2 Atrophin-1 1/1 2 355 .. 1 1064 [] -75.5 5.3e-12 Alignments of top-scoring domains: E-MAP-115: domain 1 of 1, from 32 to 173: score -99.1, E = 4.2 *->APgkaensaAlsKptAGTTD.aeEAtrLLAEKRRqAReQrEkEEqER +P +++++a + p D + A AR + Rabbit4Lib 32 SPESPAPPARSPSPPPKVVDmPSHASQ-------SARFNK------- 64 reqeErdrrkREElk......rraaEeRtlrrEeEARrrEeeraRekeek + R l + ++ + a R + + e Rr e+raRe+ e+ Rabbit4Lib 65 HLDRGFNSCARSDLYfvplegSKLAKKR-ADLVEKVRREAEQRAREEKER 113 KKqEGEEKRKAGEElkRkAEEeLLLKekrEqEeqErAmiqkQKEeAEara E+ rE+E+ Er ++ KE Rabbit4Lib 114 --------------------ER-----EREREK-ER---EREKER----- 129 REeAEr.vRlEREkhfqqeEQERlERkKRLeEIMKRTRksevsekVKkeD e Er+v l E +q l R++ e V + Rabbit4Lib 130 --ELERsVKLAQEAALQWS--AHLWAQCRIDLXF------EPGSAVATVP 169 skeG<-* + G Rabbit4Lib 170 PYLG 173 Atrophin-1: domain 1 of 1, from 2 to 355: score -75.5, E = 5.3e-12 *->GkhsmrtrlyrGststllSGRKKqPasPdGraaavsvdvrssGknsP Rabbit4Lib - ----------------------------------------------- - saastiSnDsKAEAvKKsAKKVkeeaASglknTKRqREKvAsDtEDtDRA Rabbit4Lib - -------------------------------------------------- - tsKKtKtqEisrPtsPveGenlsSdsrsvNDEGssDPKDiDqDfrsvsPs Rabbit4Lib - -------------------------------------------------- - lPsPqdlrslsdaSAsqqgLqaQPlalqlPSgaAsaqstGGlPPGteklP Rabbit4Lib - -------------------------------------------------- - TlaPsPsattlPPasSsAtaqPmRFPysssSsvaaAAsslissssslasP +a Rabbit4Lib 2 ------HA------------------------------------------ 3 flaSqalPlyPmsaPPstsLsvSaQPPKytQPSLhsQavpsPHsLqtGPL s Rabbit4Lib 4 ----------------------------------------S--------- 4 LQgPgPPqPyGRLlanSsagqGPlgPStaAqstAHPPvstHHstiQlqas GR Rabbit4Lib 5 ----------GR-------------------------------------- 6 QsalQqQQqhrenslPPaPlAfPHPLEGGssikahPyamiPsLGsLRPYP H L Rabbit4Lib 7 -----------------------H------------------L------- 8 agqAHkhPPHLSqvSyfsanaNlPPvssalkslSSlStgsyPsaHPsPlQ Pl Rabbit4Lib 9 ----------------------------------------------RPLN 12 LgPQsaPlPfsPvqPtvlTsSasLstviatvASsPatyklasvPsqsPyg Rabbit4Lib - -------------------------------------------------- - krafvPGayktiTPPsykPGsPPsFRTsTPPaYRGtSssaqPGtFKPgSa ++P Rabbit4Lib 13 ---------------------------------------SGP-------- 15 aVssGglvPaaPSgLPsLPPPPAAPAsGPPLsAvQIKeEaldEaEePESP L A QIK+E+++E+E PESP Rabbit4Lib 16 -----------------------------TLNAAQIKQEPAEEYESPESP 36 vPPaRSPSPePkVVDvPSHASQSARFyKHLDRGyNSCARsDLYFvPLeGS PPaRSPSP+PkVVD PSHASQSARF+KHLDRG+NSCARsDLYFvPLeGS Rabbit4Lib 37 APPARSPSPPPKVVDMPSHASQSARFNKHLDRGFNSCARSDLYFVPLEGS 86 KLAKKRedlvEKvkREAEQkAREEkEREkEkEkEkEREREkERElERavk KLAKKR+dlvEKv+REAEQ+AREEkERE+E+E+EkEREREkERElER+vk Rabbit4Lib 87 KLAKKRADLVEKVRREAEQRAREEKEREREREREKEREREKERELERSVK 136 kAsssAqEGRAPle.dPsLsGPvhmRPsFEPPgsavAaVPPYlGPDTPAL + AqE l L FE PgsavA+VPPYlGPDTPAL Rabbit4Lib 137 L----AQEAA--LQwSAHLWAQCRIDLXFE-PGSAVATVPPYLGPDTPAL 179 RTLSEYARPHVMSPtNRNHPFYvPLnavDPGLLaYnvPaLYsvDPaiRER RTLSEYARPHVMSP+ FYvPL+avDPGLL+YnvPaLYs+DPa+RE Rabbit4Lib 180 RTLSEYARPHVMSPGIVTIXFYVPLGAVDPGLLGYNVPALYSSDPAARE- 228 ELREREiREREiRERdLRdRlKPGFEVKPsELdPLHgvtnPGldhFaRHs RERE+RERdLRdRlKPGFEVKPsELdP g + + + Rabbit4Lib 229 -------REREARERDLRDRLKPGFEVKPSELDPSMGSLGQAWIPSLDTG 271 aLalqPaPaGlHPFAsFHPsLnPLERERLALAAGPaLRPdMSYadRLAAE LalqP+P+GlHPF +FHPsL+PLERERLALAAGPaLRPdMSYa+RLAAE Rabbit4Lib 272 VLALQPGPPGLHPF-PFHPSLGPLERERLALAAGPALRPDMSYAERLAAE 320 RiHAERvAaLtsDPLARLQMlNVTPHHHQHSHIHSHLHLHQQDalHaaSA R+HAERvAaL++DPLARLQMlNVTP l Rabbit4Lib 321 RQHAERVAALGNDPLARLQMLNVTP-------------------LXTSTF 351 sPVHPLvDPLaaGsHLaRiPYPaGTLPNPLLgqPlHEnEvLRHqlFaaPY s Rabbit4Lib 352 S------------------------------------------------- 352 PRDLPaalsaPMSAAHQLQAMHAQSAELQRLAlEqQQWLHaHhhlHsvhL + Rabbit4Lib 353 --------------------------------IK---------------- 354 PaQEDYYSrLKKEsDKqL<-* L Rabbit4Lib 355 -----------------L 355 // Query: Rabbit4Lib.1043.C1 630 1 638 nseq=2; minus strand; translated Scores for sequence family classification (score includes all domains): Model Description Score E-value N -------- ----------- ----- ------- --- [no hits above thresholds] Parsed for domains: Model Domain seq-f seq-t hmm-f hmm-t score E-value -------- ------- ----- ----- ----- ----- ----- ------- [no hits above thresholds] Alignments of top-scoring domains: [no hits above thresholds] // Query: Rabbit4Lib.1045.C1 333 265 679 nseq=3; minus strand; translated Scores for sequence family classification (score includes all domains): Model Description Score E-value N -------- ----------- ----- ------- --- [no hits above thresholds] Parsed for domains: Model Domain seq-f seq-t hmm-f hmm-t score E-value -------- ------- ----- ----- ----- ----- ----- ------- [no hits above thresholds] Alignments of top-scoring domains: [no hits above thresholds] // Query: Rabbit4Lib.1050.C1 674 1 948 nseq=2; minus strand; translated Scores for sequence family classification (score includes all domains): Model Description Score E-value N -------- ----------- ----- ------- --- GDPD Glycerophosphoryl diester phosphodiesterase 113.1 5.4e-30 1 Parsed for domains: Model Domain seq-f seq-t hmm-f hmm-t score E-value -------- ------- ----- ----- ----- ----- ----- ------- GDPD 1/1 46 301 .. 1 320 [] 113.1 5.4e-30 Alignments of top-scoring domains: GDPD: domain 1 of 1, from 46 to 301: score 113.1, E = 5.4e-30 *->HRGasgsyPkaqlpENTllafrkAveaGADyiEfDVqlTKDGvpVvm HRG+s+++P ENTl+a+r+A++ G ++E+D+ T+DG+pV+m Rabbit4Lib 46 HRGGSHDAP-----ENTLAAIRQAAKNGXNGLELDIEFTSDGIPVLM 87 HDftLdrttdgagsfesvgglrvkdlTleeLkkldltedlldLLllhSdS HD t+drttdg+g r+ dlT e+++kl+ Rabbit4Lib 88 HDNTVDRTTDGSG--------RLCDLTFEQIRKLN--------------- 114 tfkagagrkppfsgervplwsgcreeedfpfpTLeevleevpwdvgfnie ++a ++ f++e++ pTL e+++e +++++++i+ Rabbit4Lib 115 -PAANHRLRNDFPDEKI--------------PTLREAVAE-CLKNNLTIF 148 ikikqypeqiaveevfeivkdllasvdeilkkvlkkadprrvifssFdpd ++k + ++ +++++ + + ++sF p+ Rabbit4Lib 149 FDVKGHAXYGTDALK-KMYMEFPQLYNSSM-------------VCSFLPE 184 slqrlrelapprmslplvfLts.raeaedpekDpRgslleraarfagapa + ++r+ + ++ +++++ ++ ++ + +pR s+ r a f+g + Rabbit4Lib 185 VIYKMRQTDQ---NVITALTHRpWSLSHTGGGKPRYSSFWRQAVFVGLDI 231 llgevslvdeglgpwkmiI.........egkdpdlVkraharGlkVhvWT ll +++ + + + + ++ pd k+ a+G++V+ WT Rabbit4Lib 232 LLDWSMHNVLW-----YLCgvsaflmqkDFVSPDYLKKWSAKGIQVVGWT 276 vnnedlpytddedemrrllklGVDGviTDrpdl<-* vn+ de + iTD + + Rabbit4Lib 277 VNTF--------DEKSYYESTWXSSYITDSMLE 301 // Query: Rabbit4Lib.1051.C1 947 1 980 nseq=2; translated Scores for sequence family classification (score includes all domains): Model Description Score E-value N -------- ----------- ----- ------- --- [no hits above thresholds] Parsed for domains: Model Domain seq-f seq-t hmm-f hmm-t score E-value -------- ------- ----- ----- ----- ----- ----- ------- [no hits above thresholds] Alignments of top-scoring domains: [no hits above thresholds] // Query: Rabbit4Lib.1056.C2 264 1428 1634 nseq=23; translated Scores for sequence family classification (score includes all domains): Model Description Score E-value N -------- ----------- ----- ------- --- [no hits above thresholds] Parsed for domains: Model Domain seq-f seq-t hmm-f hmm-t score E-value -------- ------- ----- ----- ----- ----- ----- ------- [no hits above thresholds] Alignments of top-scoring domains: [no hits above thresholds] // Query: Rabbit4Lib.1057.C1 1239 14 1115 nseq=3; minus strand; translated Scores for sequence family classification (score includes all domains): Model Description Score E-value N -------- ----------- ----- ------- --- WD40 WD domain, G-beta repeat 213.4 3.3e-60 7 Pox_A_type_inc Viral A-type inclusion protein repeat 16.6 0.6 1 Parsed for domains: Model Domain seq-f seq-t hmm-f hmm-t score E-value -------- ------- ----- ----- ----- ----- ----- ------- Pox_A_type_inc 1/1 28 50 .. 1 23 [] 16.6 0.6 WD40 1/7 72 109 .. 1 38 [] 31.6 1.8e-05 WD40 2/7 114 151 .. 1 38 [] 27.4 0.00034 WD40 3/7 160 196 .. 1 38 [] 33.9 3.6e-06 WD40 4/7 201 238 .. 1 38 [] 43.7 4.3e-09 WD40 5/7 243 280 .. 1 38 [] 47.4 3.2e-10 WD40 6/7 287 324 .. 1 38 [] 17.3 0.37 WD40 7/7 329 366 .] 1 38 [] 30.8 3.1e-05 Alignments of top-scoring domains: Pox_A_type_inc: domain 1 of 1, from 28 to 50: score 16.6, E = 0.6 *->rEldrlRrrIsdLekqLsdcrrn<-* Eld+lR++ ++L++q++d r+ Rabbit4Lib 28 SELDQLRQEAEQLKNQIRDARKX 50 WD40: domain 1 of 7, from 72 to 109: score 31.6, E = 1.8e-05 *->eclavl.gHtspVtcvafspdsgpllasgSrDgtikiWd<-* ++l+gH + ++++ + d ++ll+s+S Dg++ iWd Rabbit4Lib 72 RTRRTLrGHLAKIYAMHWGTD-SRLLVSASQDGKLIIWD 109 WD40: domain 2 of 7, from 114 to 151: score 27.4, E = 0.00034 *->eclavl.gHtspVtcvafspdsgpllasgSrDgtikiWd<-* + ++ ++ +s+V +++++p+ g+++a+g+ D+ + i++ Rabbit4Lib 114 NKVHAIpLRSSWVXDLCIAPS-GNYVACGGLDNICSIYN 151 WD40: domain 3 of 7, from 160 to 196: score 33.9, E = 3.6e-06 *->eclavl.gHtspVtcvafspdsgpllasgSrDgtikiWd<-* + ++l gHt+ +c++f d ++++++S D t+ +Wd Rabbit4Lib 160 RVSRELaGHTGYLSCCRFLDD--NQIVTSSGDTTCALWD 196 WD40: domain 4 of 7, from 201 to 238: score 43.7, E = 4.3e-09 *->eclavl.gHtspVtcvafspdsgpllasgSrDgtikiWd<-* +++++++gHt+ V++++ +pd +l++sg +D + k+Wd Rabbit4Lib 201 QQTTTFtGHTGDVMSLSLAPD-TRLFVSGACDASAKLWD 238 [output cut off at A = 5 top alignments] // Query: Rabbit4Lib.1057.C2 296 1 455 nseq=3; minus strand; translated Scores for sequence family classification (score includes all domains): Model Description Score E-value N -------- ----------- ----- ------- --- WD40 WD domain, G-beta repeat 55.5 1.1e-12 2 Parsed for domains: Model Domain seq-f seq-t hmm-f hmm-t score E-value -------- ------- ----- ----- ----- ----- ----- ------- WD40 1/2 2 39 .. 1 38 [] 29.5 7.9e-05 WD40 2/2 44 81 .. 1 38 [] 27.4 0.00034 Alignments of top-scoring domains: WD40: domain 1 of 2, from 2 to 39: score 29.5, E = 7.9e-05 *->eclavl.gHtspVtcvafspdsgpllasgSrDgtikiWd<-* +l+gH + ++++ + d ++ll+s+S Dg++ iWd Rabbit4Lib 2 HASGTLrGHLAKIYAMHWGTD-SRLLVSASQDGKLIIWD 39 WD40: domain 2 of 2, from 44 to 81: score 27.4, E = 0.00034 *->eclavl.gHtspVtcvafspdsgpllasgSrDgtikiWd<-* + ++ ++ +s+V +++++p+ g+++a+g+ D+ + i++ Rabbit4Lib 44 NKVHAIpLRSSWVXDLCIAPS-GNYVACGGLDNICSIYN 81 // Query: Rabbit4Lib.1060.C1 420 223 586 nseq=3; minus strand; translated Scores for sequence family classification (score includes all domains): Model Description Score E-value N -------- ----------- ----- ------- --- UPF0041 Uncharacterised protein family (UPF0041) 120.2 3.9e-32 1 Parsed for domains: Model Domain seq-f seq-t hmm-f hmm-t score E-value -------- ------- ----- ----- ----- ----- ----- ------- UPF0041 1/1 23 120 .] 1 128 [] 120.2 3.9e-32 Alignments of top-scoring domains: UPF0041: domain 1 of 1, from 23 to 120: score 120.2, E = 3.9e-32 *->vfraafkrfWnheaGPkTvHFWAPtlkWGLvlAGlgDlKrppekiSg +++ ++ nh+aGP Tv+FWAP +kWGLv AGl+D++rp+ek+S Rabbit4Lib 23 MLPEKLRPLYNHPAGPRTVFFWAPIMKWGLVCAGLADMARPAEKLST 69 pqnsALlatsaIwtRyslvvkPkNyLLasVnfflactqgaQlgRilnHnY +q + L+at+ Iw Ryslv+ PkN L++Vnff++ +++ Ql ++ Rabbit4Lib 70 AQSAVLMATGFIWSRYSLVIIPKNWSLFAVNFFVGAAGASQL--FA---- 113 ryqneDsekqkisylkkEvkeheheaektak<-* +D++k Rabbit4Lib 114 ---FGDITKN--------------------- 120 // Query: Rabbit4Lib.1063.C1 Scores for sequence family classification (score includes all domains): Model Description Score E-value N -------- ----------- ----- ------- --- [no hits above thresholds] Parsed for domains: Model Domain seq-f seq-t hmm-f hmm-t score E-value -------- ------- ----- ----- ----- ----- ----- ------- [no hits above thresholds] Alignments of top-scoring domains: [no hits above thresholds] // Query: Rabbit4Lib.1064.C1 210 1 372 nseq=2; translated Scores for sequence family classification (score includes all domains): Model Description Score E-value N -------- ----------- ----- ------- --- [no hits above thresholds] Parsed for domains: Model Domain seq-f seq-t hmm-f hmm-t score E-value -------- ------- ----- ----- ----- ----- ----- ------- [no hits above thresholds] Alignments of top-scoring domains: [no hits above thresholds] // Query: Rabbit4Lib.1065.C1 79 125 274 nseq=2; translated Scores for sequence family classification (score includes all domains): Model Description Score E-value N -------- ----------- ----- ------- --- [no hits above thresholds] Parsed for domains: Model Domain seq-f seq-t hmm-f hmm-t score E-value -------- ------- ----- ----- ----- ----- ----- ------- [no hits above thresholds] Alignments of top-scoring domains: [no hits above thresholds] // Query: Rabbit4Lib.1065.C2 1857 232 1269 nseq=6; minus strand; translated Scores for sequence family classification (score includes all domains): Model Description Score E-value N -------- ----------- ----- ------- --- Tetraspannin Tetraspanin family 214.0 2.3e-60 1 Parsed for domains: Model Domain seq-f seq-t hmm-f hmm-t score E-value -------- ------- ----- ----- ----- ----- ----- ------- Tetraspannin 1/1 15 276 .. 1 291 [] 214.0 2.3e-60 Alignments of top-scoring domains: Tetraspannin: domain 1 of 1, from 15 to 276: score 214.0, E = 2.3e-60 *->clKyllfllNflfwLlGilllgvGiWllvdkgsfssllglssscfla l + l+l N+l +L+Gi+l+++G++l++++++ s+++ ++s +++ Rabbit4Lib 15 KLAQGLWLMNWLSVLAGIVLFSLGLFLKIELRKRSEVM--NHSESHF 59 apyvlIlavGaviflvgflGc........cGAikEsrclLglYfifLlll +p+ lI +G + +++ l + + + + + +++ L++Y+ l+ Rabbit4Lib 60 VPNSLI-SMGLLSCVFNSLAGkicydaldPAKYAKWKPWLKPYLASAXLF 108 filelaagilafvfrdvkveselgetlkkalkkyydtddysawlqrVdkW ++++ ++ +f +r+ +es+l ++lk ++k y+dtd+++++++ Rabbit4Lib 109 NVALFLVALCCFLLRG-SLESTLAQGLKSGMKYYRDTDTPGRCFM----- 152 eIRsCLvdsvCnltadFFteawdalQsqfkCCGPPvnggfyytDTlWf.p ++++d+lQ +fkCCG +ng ++D Wf++ Rabbit4Lib 153 ------------------KKTIDMLQIEFKCCG--NNG---FRD--WFeI 177 qwssnyfsgn.s.ev.drik.nvdcklwrn.v.vlCydcsvanasgktee qw+sn++++++s+ev+drik+nvd+++++++v+++C++++ Rabbit4Lib 178 QWISNRYLDFsSkEVkDRIKsNVDGRYLVDgVpFSCCNPN---------- 217 esprpcevsnctccppssecc.qdapsniyteGCkekvleflrenlliia sprpc++ ++t++++++++++q+++ n++ + +++++ ++ ++ Rabbit4Lib 218 -SPRPCIQYQLTNNSAHYSYDhQTEELNLWVRXXXXXXXSYYSSLMNSMG 266 gvaigiaviq<-* +v + + +++ Rabbit4Lib 267 VVTLFVWLFE 276 // Query: Rabbit4Lib.1065.C3 731 1 826 nseq=2; minus strand; translated Scores for sequence family classification (score includes all domains): Model Description Score E-value N -------- ----------- ----- ------- --- OTU OTU-like cysteine protease 159.0 7.8e-44 1 Parsed for domains: Model Domain seq-f seq-t hmm-f hmm-t score E-value -------- ------- ----- ----- ----- ----- ----- ------- OTU 1/1 55 166 .. 1 157 [] 159.0 7.8e-44 Alignments of top-scoring domains: OTU: domain 1 of 1, from 55 to 166: score 159.0, E = 7.8e-44 *->pgDGnCLfravsdqlgldadkdvgdqelheelRemvsglveylrrwe + DG CLfrav+dq++ gdq++he +R+++ ++yl+ Rabbit4Lib 55 KEDGACLFRAVADQVY-------GDQDMHEVVRKHC---MDYLM--- 88 edelaenredfskfleedsGDspdesfeeYikriskdgaWGgeWySLEni +n++ fs++++ed f++Yi+r++k++++G+ +i Rabbit4Lib 89 -----KNADYFSNYVTED--------FTTYINRKRKNNCHGN------HI 119 eiqAlahilrvpIivydlyklqsgritvfieiygkylplnkkkpirlsyl e qA+a+++++p++v y++++++i++f++i+ +n ++pir+sy+ Rabbit4Lib 120 EMQAMAEMYNRPVEV---YQYSTEPINTFHGIH-----QNEDEPIRVSYH 161 ghLeglgeHY<-* + ++HY Rabbit4Lib 162 R-----NIHY 166 // Query: Rabbit4Lib.1065.C5 1211 123 874 nseq=5; minus strand; translated Scores for sequence family classification (score includes all domains): Model Description Score E-value N -------- ----------- ----- ------- --- Tetraspannin Tetraspanin family 125.4 1e-33 1 Parsed for domains: Model Domain seq-f seq-t hmm-f hmm-t score E-value -------- ------- ----- ----- ----- ----- ----- ------- Tetraspannin 1/1 55 251 .] 1 291 [] 125.4 1e-33 Alignments of top-scoring domains: Tetraspannin: domain 1 of 1, from 55 to 251: score 125.4, E = 1e-33 *->clKyllfllNflfwLlGilllgvGiWllvdkgsfssllglssscfla l + l+l N+l +L+Gi+l+++G++l++++++ s+++ ++s +++ Rabbit4Lib 55 KLAQGLWLMNWLSVLAGIVLFSLGLFLKIELRKRSEVM--NHSESHF 99 apyvlIlavGaviflvgflGc........cGAikEsrclLglYfifLlll +p+ lI +G + +++ l + + + + + +++ L++Y+ f + Rabbit4Lib 100 VPNSLI-SMGLLSCVFNSLAGkicydaldPAKYAKWKPWLKPYLLFAYXF 148 filelaagilafvfrdvkveselgetlkkalkkyydtddysawlqrVdkW ++++ ++ +f +r+ +es+l ++lk ++k y+dtd+++++++ Rabbit4Lib 149 NVALFLVALCCFLLRG-SLESTLAQGLKSGMKYYRDTDTPGRCFM----- 192 eIRsCLvdsvCnltadFFteawdalQsqfkCCGPPvnggfyytDTlWf.p ++++d+lQ +fkCCG +ng ++D Wf++ Rabbit4Lib 193 ------------------KKTIDMLQIEFKCCG--NNG---FRD--WFeI 217 qwssnyfsgn.s.ev.drik.nvdcklwrnvvlCydcsvanasgkteees qw+sn++++++s+ev+drik+nvd+++ Rabbit4Lib 218 QWISNRYLDFsSkEVkDRIKsNVDGRY----------------------- 244 prpcevsnctccppsseccqdapsniyteGCkekvleflrenlliiagva +++ Rabbit4Lib 245 ----------------------------------LVD------------- 247 igiaviq<-* v Rabbit4Lib 248 ---GVPF 251 // Query: Rabbit4Lib.1067.C1 1669 70 702 nseq=3; minus strand; translated Scores for sequence family classification (score includes all domains): Model Description Score E-value N -------- ----------- ----- ------- --- GST_C Glutathione S-transferase, C-terminal domain 90.7 3e-23 1 GST_N Glutathione S-transferase, N-terminal domain 65.4 1.2e-15 1 Parsed for domains: Model Domain seq-f seq-t hmm-f hmm-t score E-value -------- ------- ----- ----- ----- ----- ----- ------- GST_N 1/1 6 75 .. 1 84 [] 65.4 1.2e-15 GST_C 1/1 85 188 .. 1 111 [] 90.7 3e-23 Alignments of top-scoring domains: GST_N: domain 1 of 1, from 6 to 75: score 65.4, E = 1.2e-15 *->lklfngrgspraervrillalekGveyeivrvdleagehksNrpefl + +f g r+e++r+ll G++++++ v+l + + Rabbit4Lib 6 IVYFPVQG--RCEAMRMLLT-DQGQSWKEEVVNL---------ETWS 40 klnPlm.LpfgqvPaLvdgdGdgkkltESrAIarYlar<-* + + ++ +gq+P L+dg +++l +S+AI+r+l r Rabbit4Lib 41 QGSLKAsCLYGQLPKLQDG---DLTLYQSNAILRHLGR 75 GST_C: domain 1 of 1, from 85 to 188: score 90.7, E = 3e-23 *->aerarwdmiedsrfrdlrldaawlpygkpefaekdeeeveealekll e a dm+ d +++dlr++++ l+y +++ +++ + +al+ l Rabbit4Lib 85 REAALLDMVND-GVEDLRIKYITLIYTNYD---AGKDSYVKALPGHL 127 kvlealeeeLkghgkkylvGdkltlADialfpaldwlerldpdplwreey k +e l+ + k+ gk ++vGd++++AD++l+++l+ +++l+p +l +++ Rabbit4Lib 128 KPFETLLSQNKD-GKSFIVGDQISFADYNLLDLLLTHQILAPGCL--DAF 174 PnLkawrkrvaarp<-* P+L+a++ r++arp Rabbit4Lib 175 PLLSAYVARLSARP 188 // Query: Rabbit4Lib.1067.C2 714 777 1064 nseq=2; minus strand; translated Scores for sequence family classification (score includes all domains): Model Description Score E-value N -------- ----------- ----- ------- --- GST_C Glutathione S-transferase, C-terminal domain 21.5 0.0028 1 Parsed for domains: Model Domain seq-f seq-t hmm-f hmm-t score E-value -------- ------- ----- ----- ----- ----- ----- ------- GST_C 1/1 1 73 [. 1 111 [] 21.5 0.0028 Alignments of top-scoring domains: GST_C: domain 1 of 1, from 1 to 73: score 21.5, E = 0.0028 *->aerarwdmiedsrfrdlrldaawlpygkpefaekdeeeveealekll ++ + +al+ l Rabbit4Lib 1 ----------------------------------KD-SYVKALPGHL 12 kvlealeeeLkghgkkylvGdkltlADialfpaldwlerldpdplwreey k +e l+ + k+ gk ++vGd++++AD++l+++l+ +++l+p +l +++ Rabbit4Lib 13 KPFETLLSQNKD-GKSFIVGDQISFADYNLLDLLLTHQILAPGCL--DAF 59 PnLkawrkrvaarp<-* P+L+a++ r++arp Rabbit4Lib 60 PLLSAYVARLSARP 73 // Query: Rabbit4Lib.1068.C1 29 1 344 nseq=2; minus strand; translated Scores for sequence family classification (score includes all domains): Model Description Score E-value N -------- ----------- ----- ------- --- [no hits above thresholds] Parsed for domains: Model Domain seq-f seq-t hmm-f hmm-t score E-value -------- ------- ----- ----- ----- ----- ----- ------- [no hits above thresholds] Alignments of top-scoring domains: [no hits above thresholds] // Query: Rabbit4Lib.1068.C2 2420 1 1351 nseq=5; minus strand; translated Scores for sequence family classification (score includes all domains): Model Description Score E-value N -------- ----------- ----- ------- --- NAD_Gly3P_dh_C NAD-dependent glycerol-3-phosphate deh 309.5 3.9e-89 1 NAD_Gly3P_dh_N NAD-dependent glycerol-3-phosphate deh 305.7 5.5e-88 1 ApbA Ketopantoate reductase PanE/ApbA -33.6 0.79 1 Semialdhyde_dh Semialdehyde dehydrogenase, NAD bindin -34.5 0.78 1 F420_oxidored NADP oxidoreductase coenzyme F420-depe -48.0 0.14 1 Parsed for domains: Model Domain seq-f seq-t hmm-f hmm-t score E-value -------- ------- ----- ----- ----- ----- ----- ------- Semialdhyde_dh 1/1 16 150 .. 1 154 [] -34.5 0.78 ApbA 1/1 17 182 .. 1 170 [] -33.6 0.79 NAD_Gly3P_dh_N 1/1 15 186 .. 1 175 [] 305.7 5.5e-88 F420_oxidored 1/1 16 213 .. 1 252 [] -48.0 0.14 NAD_Gly3P_dh_C 1/1 203 353 .. 1 160 [] 309.5 3.9e-89 Alignments of top-scoring domains: Semialdhyde_dh: domain 1 of 1, from 16 to 150: score -34.5, E = 0.78 *->kVaIvGAtGyvGqeLmlrl.......LaerHppvelvallassrSAG kV IvG +G+ G+ + ++ +++ +La+ p +++ + G Rabbit4Lib 16 KVCIVG-SGNWGSAI-AKIvggnaaqLAQ-FDPRVTMWVFEEDI-GG 58 kkvafaypdRWldvpileggkdltved........lpdpedf..akdvDi kk+++ i + ++++ ++++ +++ ++ p+ ++ a+d+Di Rabbit4Lib 59 KKLTEI---------INTQHENVKYLPghklppnvVAVPDVVkaAADADI 99 vFfAlpagvskelapkl...leaGaGkVIDlSsafRmddpevYekWYGfk +f +p+ ++ +++++l+a+a + I+ Rabbit4Lib 100 LIFVVPHQFIGKICDQIkghLKANA-IGIS-------------------L 129 .eg.kiHapelLdvpyglPEvNreaikka<-* +g + ++p gl + e+i ++ Rabbit4Lib 130 iKGvD-------EGPKGLKLI-SEVIGEH 150 ApbA: domain 1 of 1, from 17 to 182: score -33.6, E = 0.79 *->IaIlGaG....AiGslygarLar.aGhd.aVtlil.....Rsrehve ++I+G+G+ ++Ai ++g+ a+ a d++Vt+++ +++ +++ e Rabbit4Lib 17 VCIVGSGnwgsAIAKIVGGNAAQlAQFDpRVTMWVfeediGGKKLTE 63 aiirenGlriespgegervvpppaataasetstandpeslgpaDlvivav i+ +++ + g++ p ++a++++ + +++aD +i+ v Rabbit4Lib 64 I-INTQHENVKYLP-GHKLPPNVVAVPDV-------VKAAADADILIFVV 104 KayqteealedilapllgpnkdqtvvlllQNG.......lGhe.eelrea + + + ++ +l+ n ++ ++l G ++++++l +e++ e+ Rabbit4Lib 105 PHQFIGKICDQ-IKGHLKAN---AIGISLIKGvdegpkgLKLIsEVIGEH 150 vfne.prervlgGvtthgatregpGhvhhaGvpGrtviGelpg<-* + + p+ + g+ + ++ e +t+iG+ ++ Rabbit4Lib 151 L--GiPMSVLMGANIASEVADEK---------FCETTIGCKDQ 182 NAD_Gly3P_dh_N: domain 1 of 1, from 15 to 186: score 305.7, E = 5.5e-88 *->kkiaVlGaGsWGTALAkvLadngk.lpdeFeheVrlWgreeki.Gee kk++++G+G+WG+A+Ak+++ n+++l+ +F+++V++W++ee+i+G++ Rabbit4Lib 15 KKVCIVGSGNWGSAIAKIVGGNAAqLA-QFDPRVTMWVFEEDIgGKK 60 lieeINttreNvrYLPGikLPdnlvAttDLeeAlkdAdiivlaVPsqalr l+e+INt++eNv+YLPG+kLP+n+vA++D+++A++dAdi++++VP+q+++ Rabbit4Lib 61 LTEIINTQHENVKYLPGHKLPPNVVAVPDVVKAAADADILIFVVPHQFIG 110 evlkqlkgllkkdaiivsltKGii.gEpgtlkllSevieEeLpiqprqia +++q+kg+lk++ai +sl+KG+++g + +lkl+Sevi+E+L+i+ ++ Rabbit4Lib 111 KICDQIKGHLKANAIGISLIKGVDeGPK-GLKLISEVIGEHLGIP---MS 156 VLSGPslAeEVAkglptavvvAsekdqqaae<-* VL+G+++A+EVA ++++++++++ kdq+ + Rabbit4Lib 157 VLMGANIASEVADEKFCETTIGC-KDQAQGQ 186 F420_oxidored: domain 1 of 1, from 16 to 213: score -48.0, E = 0.14 *->kIGiIGGaGnmGeaLArglaaaGvlppheviiansRdpekaaalaee k+ i+ G+Gn G+a+A+ i+ ++ +a + ++ Rabbit4Lib 16 KVCIV-GSGNWGSAIAK--------------IV-GGNAAQLAQFDPR 46 lg...................................vildagatavsne + +++ ++++ ++ ++++++ + ++++ +++v a++ ++ Rabbit4Lib 47 VTmwvfeediggkklteiintqhenvkylpghklppnV----VAVP-DVV 91 eAaeeaDvviLAVppeaapevlaelaadllkgklVIsitngitieqleqy Aa++aD+ i+ Vp + + + +++++ +l ++ + Is g+ Rabbit4Lib 92 KAAADADILIFVVPHQFIGKICDQIKGHLKANAIGISLIKGV-------- 133 llrVvRVMPNTpslvgrgasglaagdpvegsaselvaellpgvGkvveVp ++ + l+ e++ g Rabbit4Lib 134 --------------------------DEGPKGLKLISEVI-G-------- 148 ervvkAfnaisasglaylalpvealadaavlvggddaeAkklvaqladGA e++ + +++ + ++a a+++ g +++A + + + Rabbit4Lib 149 EHLGIPMSVLMGANIA----SEVADEKFCETTIGCKDQAQGQLLKELM-- 192 AkMllesgehPaqLkddvtGfggvdiGgLrvlerleprtp<-* + + f+ + ++ ++ e + + Rabbit4Lib 193 ----------------QTPNFRITVVEEVDTVEICG---A 213 NAD_Gly3P_dh_C: domain 1 of 1, from 203 to 353: score 309.5, E = 3.9e-89 *->eDvvGvEigGALKNViAIAaGivDGkeylgfGdNaKAalitrGLaEm e v++vEi+GALKN++A++aG++DG lgfGdN+KAa+i++GL+Em Rabbit4Lib 203 EEVDTVEICGALKNIVAVGAGFCDG---LGFGDNTKAAVIRLGLMEM 246 iklgaalGggpeeta.TffgLaGlGDLitTCtselsRNrrvGeaLgkgGI i++++++++gp +++ Tf++++G++DLitTC++ +RNr+v+ea++++G Rabbit4Lib 247 IAFAKLFCSGP-VSPaTFLESCGVADLITTCYG--GRNRKVAEAFARTG- 292 lksleeiekelselnGqvaEGvkTakevyelakrkglvedmPlteaVYri ks+e++eke+ lnGq+++G+ Ta+e++ ++++kglv+++Pl+ aVY++ Rabbit4Lib 293 -KSIEQLEKEM--LNGQKLQGPQTARELHSILQHKGLVDKFPLFMAVYKV 339 lyeglkpeeaieeL<-* +yeg+++ e+i++L Rabbit4Lib 340 CYEGQPVGEFIRCL 353 // Query: Rabbit4Lib.1068.C3 323 204 676 nseq=2; translated Scores for sequence family classification (score includes all domains): Model Description Score E-value N -------- ----------- ----- ------- --- [no hits above thresholds] Parsed for domains: Model Domain seq-f seq-t hmm-f hmm-t score E-value -------- ------- ----- ----- ----- ----- ----- ------- [no hits above thresholds] Alignments of top-scoring domains: [no hits above thresholds] // Query: Rabbit4Lib.1069.C1 556 48 473 nseq=4; minus strand; translated Scores for sequence family classification (score includes all domains): Model Description Score E-value N -------- ----------- ----- ------- --- [no hits above thresholds] Parsed for domains: Model Domain seq-f seq-t hmm-f hmm-t score E-value -------- ------- ----- ----- ----- ----- ----- ------- [no hits above thresholds] Alignments of top-scoring domains: [no hits above thresholds] // Query: Rabbit4Lib.1070.C1 802 1 656 nseq=2; translated Scores for sequence family classification (score includes all domains): Model Description Score E-value N -------- ----------- ----- ------- --- [no hits above thresholds] Parsed for domains: Model Domain seq-f seq-t hmm-f hmm-t score E-value -------- ------- ----- ----- ----- ----- ----- ------- [no hits above thresholds] Alignments of top-scoring domains: [no hits above thresholds] // Query: Rabbit4Lib.1070.C2 1202 1 856 nseq=14; translated Scores for sequence family classification (score includes all domains): Model Description Score E-value N -------- ----------- ----- ------- --- [no hits above thresholds] Parsed for domains: Model Domain seq-f seq-t hmm-f hmm-t score E-value -------- ------- ----- ----- ----- ----- ----- ------- [no hits above thresholds] Alignments of top-scoring domains: [no hits above thresholds] // Query: Rabbit4Lib.1073.C1 1243 1 1158 nseq=2; minus strand; translated Scores for sequence family classification (score includes all domains): Model Description Score E-value N -------- ----------- ----- ------- --- STT3 Oligosaccharyl transferase STT3 subun 32.1 1.7e-06 1 7TMR-DISM_7TM 7TM diverse intracellular signalling -63.0 9 1 Ribonuclease_BN Ribonuclease BN-like family -133.3 8.6 1 Parsed for domains: Model Domain seq-f seq-t hmm-f hmm-t score E-value -------- ------- ----- ----- ----- ----- ----- ------- Ribonuclease_BN 1/1 18 230 .. 1 273 [] -133.3 8.6 7TMR-DISM_7TM 1/1 117 289 .. 1 212 [] -63.0 9 STT3 1/1 53 387 .] 1 874 [] 32.1 1.7e-06 Alignments of top-scoring domains: Ribonuclease_BN: domain 1 of 1, from 18 to 230: score -133.3, E = 8.6 *->neddisllAAaLaYytlLsLfPlLlvllallaglfpiafaavlealk ed++ + l ++++ i +v ++ Rabbit4Lib 18 AEDRW--------------------AAX-LSVSVATI---DVKMTKL 40 dfipPssaaplisdivenllnqpnggllsggRtevtavGl.lvalwsAsn +f+ ++ +d + ll+ ++++ ls ++++l+a+ + + Rabbit4Lib 41 GFLR---LSYEKQDTLLKLLILSMAAVLS--------FSTrLFAVLRFES 79 ginalqkaLNkayde.kVeesrpsfiglr.dlrsilfsfglylalltlll +i +++ +N+ + e+ +f+++++++ ++ ++y + ++ Rabbit4Lib 80 VIHEFDPYFNYRT-TrFLAEE--GFYKFHnWFDDR----AWYPLGRIIGG 122 lslflslaisaliaklvglsgeflttvlsllrwpvsvlllfllfalLYrv + ++ l+i+++++++v + ++ +++++ ++ v ++ lf +f+ + ++ Rabbit4Lib 123 TIYPG-LMITSAAIYHVLHF-FH--ITIDIRNVCVFLAPLFSSFTTIVTY 168 lPnvkkvkwrsvlpGAlfaavlwelgsylFglYvsyfanysstYGslGav + +++++ G l aa + ++ Y+s+ ++ s++ ++ Rabbit4Lib 169 HLTK---ELKDAGAGLLAAAMIAVVP-----GYISRSVAGSYDNEGIAI- 209 iiilLlWlylsaliiLlGAelnavlseyk<-* + +l y+ ++ + s+y+ Rabbit4Lib 210 --FCMLLTYYMWI------KAVKTGSIYW 230 7TMR-DISM_7TM: domain 1 of 1, from 117 to 289: score -63.0, E = 9 *->ralifglll..GillllgfYnLflylsrrkdksyLyyalyillflly +i g ++++ +++ ++Y+ + +++ +d + ++++l l+ Rabbit4Lib 117 GRIIGGTIYpgLMITSAAIYHVLHFFHITIDIRN----VCVFLAPLF 159 qlslsglafeylDwpnipffaqkklaylllvllalffllFlrsflylkss + + ++ +y+ k l + ++ lla+ ++ + +++ Rabbit4Lib 160 SSFT--TIVTYH--------LTKELKDAGAGLLAAAMIAVVPGYISRSVA 199 srrldrllgilalllflaillalfltdylvanriaqvlvllfilillllg +d + + a+++ l+ +++ v ++++ +++ Rabbit4Lib 200 GS-YD--NEGIAIFCMLLTY------------YMWIKAVKTGSIYWAAKC 234 ikawrkgyrdArlfliaflvflvgglvSdllgllglipnnitltsyalll +++++ +++ ++ + + l++l l+ +++ +++ Rabbit4Lib 235 AL-------AYFYMVSSWGGYVFLINL-IPLHVLVLMLTGR-----FSHR 271 glvlevll..lslaLadER<-* ++v ++ + l+++L+ + Rabbit4Lib 272 IYVAYCTVycLGTILSM-Q 289 STT3: domain 1 of 1, from 53 to 387: score 32.1, E = 1.7e-06 *->llkvvifaliagvaifsralFtdtrglsyfhEfDpYYnyRltenlln llk++i++++a+++++ r lF+++r++s++hEfDpY+nyR t++l++ Rabbit4Lib 53 LLKLLILSMAAVLSFSTR-LFAVLRFESVIHEFDPYFNYRTTRFLAE 98 eGfpGDavypgkiwfdhsayYPpGsrvdyppllplLtlalygiiflflpg eGf y++++wfd++a+YP+G r+ +++++p+L +++++ i+++l+ Rabbit4Lib 99 EGF-----YKFHNWFDDRAWYPLG-RIIGGTIYPGL-MITSAAIYHVLH- 140 lLrltvslrevcfwlpPviggLlgIatylLvtLrelkndlaGliaAflla ++++t+++r+vc++l+P+++++++I+ty L+ +elk+++aGl+aA+++a Rabbit4Lib 141 FFHITIDIRNVCVFLAPLFSSFTTIVTYHLT--KELKDAGAGLLAAAMIA 188 iaPgfyvsRTvaGfyRGDtdmlaiflpllvlfflllaiktgskrdLfkkl ++Pg y+sR+vaG+y D++++aif++ll+++++++a+ktgs Rabbit4Lib 189 VVPG-YISRSVAGSY--DNEGIAIFCMLLTYYMWIKAVKTGS-------- 227 kkkkiiyavlaaLllflmvlaWgGyqsfvfllilallfilalLimgrlkk i +a+ +aL++f+mv++WgGy vfl++l++l++l+l++ gr Rabbit4Lib 228 ----IYWAAKCALAYFYMVSSWGGY---VFLINLIPLHVLVLMLTGR--- 267 LkkfvkEfeskllilvilsyvltfpgivkilgfsvliativggiiqllfv f++++++++ +++++++ti+ ++q+ fv Rabbit4Lib 268 -------FSHRIYVAY---------------CTVYCLGTIL--SMQISFV 293 gfakvrkessehmgallifgllqllafgsvvkgvyPLFRLmGaylsfyqf gf++v+ ssehm+a+++fgl+q++af++++++ l+ +qf Rabbit4Lib 294 GFQPVL--SSEHMAAFGVFGLCQIHAFVDYLRS----------KLNPQQF 331 etdeeanlfypgildkvlglisegpvlfllgllGfialweeiftnevvsd e+ lf+ +++v++++ v+ ll+l+++i++w Rabbit4Lib 332 EV-----LFRSV-ISLVGFVL--LTVGALLMLTRKISPW----------- 362 eieivgitGrfyslfdlkteyakidipiiilisewqptglaallaglrFl tGrfysl+d Rabbit4Lib 363 -------TGRFYSLLD---------------------------------- 371 aiftaPlglllGiftgllledlavfsiiyssiliKvsqlrflgvmvfvim + Rabbit4Lib 372 -----------------------------P-------------------- 372 lvlapvialiaaylasepifstyleeeaaklriiTlvlaagvasvlsavi s Rabbit4Lib 373 ---------------S---------------------------------- 373 ekSlapeknegaerglewlkvntnrdtVvitwWdyghffayfadrpkFNV + Rabbit4Lib 374 ---------------------------------------------Y---- 374 tfdGgsapsvvlgtprgywaltlmddsneageryyNPYaylsLginsmld Rabbit4Lib - -------------------------------------------------- - tlkdeilsmLetsgvkswwdygNqilkvakRCDGPFPravilnnilgvna ak +n Rabbit4Lib 375 ----------------------------AK-----------------NN- 378 ykYvrshaakvltaksgistkkYseeaekalnithprdpvgyvlvtkegm +p + Rabbit4Lib 379 ----------------------------------IPNH------------ 382 igiakpwdinkgtwdevgklsyekdtlrlyiSyssrdnkNaelyVlaldk Rabbit4Lib - -------------------------------------------------- - teiimrirggaypyynsLeeykiivmkdveeinfytstgvqkgpvGeyrl ++ Rabbit4Lib 383 ------------------------------------ASV----------- 385 dtkeaskkngnsllvkifysgklevkv<-* + Rabbit4Lib 386 SX------------------------- 387 // Query: Rabbit4Lib.1075.C1 567 17 298 nseq=3; minus strand; translated Scores for sequence family classification (score includes all domains): Model Description Score E-value N -------- ----------- ----- ------- --- GMP_PDE_delta GMP-PDE, delta subunit 136.7 4.1e-37 1 Parsed for domains: Model Domain seq-f seq-t hmm-f hmm-t score E-value -------- ------- ----- ----- ----- ----- ----- ------- GMP_PDE_delta 1/1 1 92 [. 1 162 [] 136.7 4.1e-37 Alignments of top-scoring domains: GMP_PDE_delta: domain 1 of 1, from 1 to 92: score 136.7, E = 4.1e-37 *->speeilygfklnwmnlRDadsGkVLwqikkdlsepserltierldld Rabbit4Lib - ----------------------------------------------- - aeaarehrarvpkkiLklraVsrevnFsvgekpiekFRLeqrvyFKgrlL +v+F+vgekp+++FR+++r+yF+++lL Rabbit4Lib 1 -----------------------TVEFTVGEKPVNNFRMIERHYFRNQLL 27 eewfFeFGFviPnStNTwqsiiEaaPeSqmlpasvlngPynvvidtfffd ++++F+FGF+iP+S+NT+++i++++P+S++l+++++++Py++++d+f+f+ Rabbit4Lib 28 KSFDFHFGFCIPSSKNTCEHIYDFPPLSEELISEMIRHPYETQSDSFYFV 77 ddlLVstskvrlyYd<-* dd+LV+++k++++Y+ Rabbit4Lib 78 DDRLVMHNKADYSYS 92 // Query: Rabbit4Lib.1075.C2 115 1 138 nseq=5; minus strand; translated Scores for sequence family classification (score includes all domains): Model Description Score E-value N -------- ----------- ----- ------- --- [no hits above thresholds] Parsed for domains: Model Domain seq-f seq-t hmm-f hmm-t score E-value -------- ------- ----- ----- ----- ----- ----- ------- [no hits above thresholds] Alignments of top-scoring domains: [no hits above thresholds] // Query: Rabbit4Lib.1078.C1 481 173 856 nseq=2; translated Scores for sequence family classification (score includes all domains): Model Description Score E-value N -------- ----------- ----- ------- --- Aph-1 Aph-1 protein 400.9 1.2e-116 1 Parsed for domains: Model Domain seq-f seq-t hmm-f hmm-t score E-value -------- ------- ----- ----- ----- ----- ----- ------- Aph-1 1/1 1 227 [. 1 285 [] 400.9 1.2e-116 Alignments of top-scoring domains: Aph-1: domain 1 of 1, from 1 to 227: score 400.9, E = 1.2e-116 *->MTvavffGCtfiAFGPalALFvftIArDPlRiIiliagaFFWLVSLL M++avffGCtf+AFGPa+ALF++t+A+DPlR+Iil+agaFFWLVSLL Rabbit4Lib 1 MGAAVFFGCTFVAFGPAFALFLITVAGDPLRVIILVAGAFFWLVSLL 47 lsSlvWfilvpvtdkadawlqyaLLiFGvvvSVclQElfRfaYYklLKka l+S+vWfilv+v +da+lqy+LLiFG++vSV+lQE+fRfaYYklLKka Rabbit4Lib 48 LASVVWFILVHVKTXSDARLQYGLLIFGAAVSVLLQEVFRFAYYKLLKKA 97 eeGLdsiaeegripvaPGvrllliskrqLAyVsGLGfGviSgvFsvvNiL +eGL+s++e+ +i+ is+rq+AyVsGL+fG+iSgvFsv+NiL Rabbit4Lib 98 DEGLASLSEDXKIT---------ISIRQMAYVSGLSFGIISGVFSVINIL 138 adalGPGTvGihnaLktGeiDtngdskvlfFltSAfmalaiiLLHtFWgV ad lG G ++ ++FltSAf+++aiiLLHtFWgV Rabbit4Lib 139 ADDLGQVWLGSM------------ETHXYYFLTSAFLTAAIILLHTFWGV 176 vfFdaceknnyialgiVvGaaavvsHLlvslLTlLNprefyegsLvGvav vfFdac +alg+Vv +sHLl+s+LT+LNp +ye+sL+ + Rabbit4Lib 177 VFFDACXEETDWALGLVV-----GSHLLTSGLTFLNP--WYEASLL---P 216 lYlvlvlmgvwafvvaGGslssfvnGiGRslkrlltck<-* +Y+v+v+m a Rabbit4Lib 217 IYAVTVSM---A------DA------------------ 227 // Query: Rabbit4Lib.1080.C1 1616 255 1169 nseq=2; minus strand; translated Scores for sequence family classification (score includes all domains): Model Description Score E-value N -------- ----------- ----- ------- --- Tub Tub family 551.2 7.1e-162 1 Parsed for domains: Model Domain seq-f seq-t hmm-f hmm-t score E-value -------- ------- ----- ----- ----- ----- ----- ------- Tub 1/1 59 304 .] 1 313 [] 551.2 7.1e-162 Alignments of top-scoring domains: Tub: domain 1 of 1, from 59 to 304: score 551.2, E = 7.1e-162 *->PgPrdslvqCfIkRdKsgmdygLYlgLslaleeengkkkFLLAarkr P+P++++v+C+++RdK+gmd+g+Y++++l+l++e+ +FLLA+rkr Rabbit4Lib 59 PAPQGRTVRCRLTRDKKGMDRGMYPSYFLHLDAEKK--VFLLAGRKR 103 rRstttnYiISldpddlSRssstYiGKlRSNfLGTKFTvYDngpnpnkaq +Rs+t+nY+IS dp++lSR+++++iGKlRSN+LG++FTv+Dng+np+++ Rabbit4Lib 104 KRSKTANYLISSDPTNLSRGGENFIGKLRSNLLGNRFTVFDNGQNPQRGG 153 lvspaqrSRrfsskkVspkvpsgryelAaVsYElNVLGfRGPRrMtvimp + ++v s+r+elAaV+YE+NVLGfRGPRrMtvi+p Rabbit4Lib 154 S---------------GTDVGSLRQELAAVIYETNVLGFRGPRRMTVIIP 188 gipasavepggrvpvqpeellsrssleeSfrsissSDfsSsrfsefsgpl g+ a+++ rvp++ p+ Rabbit4Lib 189 GMSADNE----RVPIR--------------------------------PR 202 nedqesllsreqnknkegllvLkNKaPrWheqlqcycLNFhGRVTvASVK n + ++ll r+qnk+ +l++L+NK+P W e++++y+LNF+GRVT+ASVK Rabbit4Lib 203 N-ARDGLLVRWQNKTLGSLIELHNKPPIWKEDSGSYTLNFQGRVTQASVK 251 NFQLvaaadaqaaspsqaeasepdyIiLQFGkVgkDvFTMDYrYPLSAfQ NFQ+v a ++pdyI+LQFG+V++D FT+DYrYPL+A+Q Rabbit4Lib 252 NFQMVQA-------------EDPDYIVLQFGRVAEDAFTLDYRYPLCALQ 288 AFAIcLSSFDtKLACE<-* AFAI+LSSFD+KLACE Rabbit4Lib 289 AFAIALSSFDGKLACE 304 // Query: Rabbit4Lib.1080.C2 883 1 658 nseq=6; minus strand; translated Scores for sequence family classification (score includes all domains): Model Description Score E-value N -------- ----------- ----- ------- --- Tub Tub family 443.0 2.6e-129 1 Parsed for domains: Model Domain seq-f seq-t hmm-f hmm-t score E-value -------- ------- ----- ----- ----- ----- ----- ------- Tub 1/1 1 219 [] 1 313 [] 443.0 2.6e-129 Alignments of top-scoring domains: Tub: domain 1 of 1, from 1 to 219: score 443.0, E = 2.6e-129 *->PgPrdslvqCfIkRdKsgmdygLYlgLslaleeengkkkFLLAarkr + s ++ +FLLA+rkr Rabbit4Lib 1 ------------------------XHASAHAS---E--VFLLAGRKR 18 rRstttnYiISldpddlSRssstYiGKlRSNfLGTKFTvYDngpnpnkaq +Rs+t+nY+IS dp++lSR+++++iGKlRSN+LG++FTv+Dng+np+++ Rabbit4Lib 19 KRSKTANYLISSDPTNLSRGGENFIGKLRSNLLGNRFTVFDNGQNPQRGG 68 lvspaqrSRrfsskkVspkvpsgryelAaVsYElNVLGfRGPRrMtvimp + ++v s+r+elAaV+YE+NVLGfRGPRrMtvi+p Rabbit4Lib 69 S---------------GTDVGSLRQELAAVIYETNVLGFRGPRRMTVIIP 103 gipasavepggrvpvqpeellsrssleeSfrsissSDfsSsrfsefsgpl g+ a+++ rvp++ p+ Rabbit4Lib 104 GMSADNE----RVPIR--------------------------------PR 117 nedqesllsreqnknkegllvLkNKaPrWheqlqcycLNFhGRVTvASVK n ++++ll r+qnk+ e+l++L+NK+P W+e++++y+LNF+GRVT+ASVK Rabbit4Lib 118 N-ASDGLLVRWQNKTLESLIELHNKPPIWNEDSGSYTLNFQGRVTQASVK 166 NFQLvaaadaqaaspsqaeasepdyIiLQFGkVgkDvFTMDYrYPLSAfQ NFQ+v+a ++pdyI+LQFG+V++D FT+DYrYPL+A+Q Rabbit4Lib 167 NFQIVHA-------------DDPDYIVLQFGRVAEDAFTLDYRYPLCALQ 203 AFAIcLSSFDtKLACE<-* AFAI+LSSFD+KLACE Rabbit4Lib 204 AFAIALSSFDGKLACE 219 // Query: Rabbit4Lib.1082.C1 894 1 849 nseq=2; translated Scores for sequence family classification (score includes all domains): Model Description Score E-value N -------- ----------- ----- ------- --- Glycolytic Fructose-bisphosphate aldolase class-I 362.1 5.7e-105 1 Parsed for domains: Model Domain seq-f seq-t hmm-f hmm-t score E-value -------- ------- ----- ----- ----- ----- ----- ------- Glycolytic 1/1 27 283 .] 1 349 [] 362.1 5.7e-105 Alignments of top-scoring domains: Glycolytic: domain 1 of 1, from 27 to 283: score 362.1, E = 5.7e-105 *->ELiktAkkIvapGKGILAADEStgTigKRLasInvENteeNRraYRe EL+++A +IvapGKGILAADES+g+++KRL++I+vENteeN + Rabbit4Lib 27 ELSDIALRIVAPGKGILAADESVGSMAKRLSQIGVENTEENLGCTXQ 73 LLfttpg.leqyISGVILFeETLYQKtkdGkpFvdvLkekGvipGIKVDk Lf+++++++++I+GVI F+ETLYQK++ p ++ kG+++GIKVDk Rabbit4Lib 74 VLFSADDrVKKCIGGVIFFHETLYQKDDMVSPSCXTIQDKGIVVGIKVDK 123 GlvpLaGTngEttTQGLDgLaeRcaqYykaGArFAKWRaVLkIgnntPSe G+vpLaGT+gEtt+ G g qY+k+GA+FAKWR+VLkI++ tPS+ Rabbit4Lib 124 GVVPLAGTDGETTIKGWMGFRNAVLQYKKDGADFAKWRCVLKISERTPSA 173 lsIqenAngLARYAsICQeNGLVPIVEPEiLvDGdHDierCqkVTekVLA l+I enAn+LARYAsICQ+NG+VPIVEPEiL+DGdHD++rCq+VT Rabbit4Lib 174 LAILENANVLARYASICQQNGIVPIVEPEILPDGDHDLKRCQYVTGEGPG 223 aVykALndhhVlLEGtLLKPNMVTPGsesakKvspeeiAeyTVtaLrRtV +VykAL LEGtLLKPNMV + speeiA++TVtaLrRtV Rabbit4Lib 224 CVYKALMTIMYXLEGTLLKPNMVILAMP-VPSDSPEEIAMATVTALRRTV 272 PpAVPGivFLSGGQSEeeAtlNLNAmNklplpkPWkLTFSYGRALQaSaL PpAVPG++FLS Rabbit4Lib 273 PPAVPGVTFLS--------------------------------------- 283 kaWgGKkENvkaAqealLkRAkaNSlAtlGKYkggaageeaAseSLfVkg Rabbit4Lib - -------------------------------------------------- - ykY<-* Rabbit4Lib - --- - // Query: Rabbit4Lib.1082.C2 350 122 579 nseq=4; translated Scores for sequence family classification (score includes all domains): Model Description Score E-value N -------- ----------- ----- ------- --- [no hits above thresholds] Parsed for domains: Model Domain seq-f seq-t hmm-f hmm-t score E-value -------- ------- ----- ----- ----- ----- ----- ------- [no hits above thresholds] Alignments of top-scoring domains: [no hits above thresholds] // Query: Rabbit4Lib.1082.C3 514 1 518 nseq=8; minus strand; translated Scores for sequence family classification (score includes all domains): Model Description Score E-value N -------- ----------- ----- ------- --- Glycolytic Fructose-bisphosphate aldolase class-I 8.5 1.6e-13 1 Parsed for domains: Model Domain seq-f seq-t hmm-f hmm-t score E-value -------- ------- ----- ----- ----- ----- ----- ------- Glycolytic 1/1 1 146 [. 1 349 [] 8.5 1.6e-13 Alignments of top-scoring domains: Glycolytic: domain 1 of 1, from 1 to 146: score 8.5, E = 1.6e-13 *->ELiktAkkIvapGKGILAADEStgTigKRLasInvENteeNRraYRe Rabbit4Lib - ----------------------------------------------- - LLfttpgleqyISGVILFeETLYQKtkdGkpFvdvLkekGvipGIKVDkG +G+++GIKV kG Rabbit4Lib 1 ------------------------------------XVRGIVVGIKVVKG 14 lvpLaGTngEttTQGLDgLaeRcaqYykaGArFAKWRaVLkIgnntPSel +v La Rabbit4Lib 15 VVILA--------------------------------------------- 19 sIqenAngLARYAsICQeNGLVPIVEPEiLvDGdHDierCqkVTekVLAa Rabbit4Lib - -------------------------------------------------- - VykALndhhVlLEGtLLKPNMVTPGsesakKvspeeiAeyTVtaLrRtVP M +P s speeiA++TVtaLrRtVP Rabbit4Lib 20 --------------------MPVPSSX-----SPEEIAMATVTALRRTVP 44 pAVPGivFLSGGQSEeeAtlNLNAmNklplpkPWkLTFSYGRALQaSaLk pAVPG++FLSGGQSEeeA+lNLNA+N +plp+PW+LTFSYGRALQaSaL+ Rabbit4Lib 45 PAVPGVTFLSGGQSEEEASLNLNAINRCPLPRPWALTFSYGRALQASALN 94 aWgGKkENvkaAqealLkRAkaNSlAtlGKYkggaageeaAseSLfVkgy aW G + N aA e+++kRA+ N+lA++GKY g+++ e +SL+ +++ Rabbit4Lib 95 AWRGQQDNAGAATEEFIKRAEVNGLAAQGKYEGSGEEVERLXQSLYIANH 144 kY<-* +Y Rabbit4Lib 145 AY 146 // Query: Rabbit4Lib.1082.C4 863 1 862 nseq=4; minus strand; translated Scores for sequence family classification (score includes all domains): Model Description Score E-value N -------- ----------- ----- ------- --- Glycolytic Fructose-bisphosphate aldolase class-I 332.0 6.8e-96 1 Parsed for domains: Model Domain seq-f seq-t hmm-f hmm-t score E-value -------- ------- ----- ----- ----- ----- ----- ------- Glycolytic 1/1 38 288 .] 1 349 [] 332.0 6.8e-96 Alignments of top-scoring domains: Glycolytic: domain 1 of 1, from 38 to 288: score 332.0, E = 6.8e-96 *->ELiktAkkIvapGKGILAADEStgTigKRLasInvENteeNRraYRe EL+++A +IvapGKGILAADES+g+++KRL++I+vENteeN + Rabbit4Lib 38 ELSDIALRIVAPGKGILAADESVGSMAKRLSQIGVENTEENLGCTXQ 84 LLfttpg.leqyISGVILFeETLYQKtkdGkpFvdvLkekGvipGIKVDk Lf+++++++++I+GVI F+ETLYQK++ p ++ kG+++GIKVDk Rabbit4Lib 85 VLFSADDrVKKCIGGVIFFHETLYQKDDMVSPSCXTIQDKGIVVGIKVDK 134 GlvpLaGTngEttTQGLDgLaeRcaqYykaGArFAKWRaVLkIgnntPSe G+vpLaGT+gEtt+ G g qY+k+GA+FAKWR+VLkI++ tPS+ Rabbit4Lib 135 GVVPLAGTDGETTIKGWMGFRNAVLQYKKDGADFAKWRCVLKISERTPSA 184 lsIqenAngLARYAsICQeNGLVPIVEPEiLvDGdHDierCqkVTekVLA l+I enAn+LARYAsICQ+NG+VPIVEPEiL+DGdHD++rCq+VT Rabbit4Lib 185 LAILENANVLARYASICQQNGIVPIVEPEILPDGDHDLKRCQYVTGEGPG 234 aVykALndhhVlLEGtLLKPNMVTPGsesakKvspeeiAeyTVtaLrRtV +VykAL LEGtLLKPNMV ++ speeiA++TVtaLrRtV Rabbit4Lib 235 CVYKALMTIMYXLEGTLLKPNMVILAMPVPSSXSPEEIAMATVTALRRTV 284 PpAVPGivFLSGGQSEeeAtlNLNAmNklplpkPWkLTFSYGRALQaSaL PpAV Rabbit4Lib 285 PPAV---------------------------------------------- 288 kaWgGKkENvkaAqealLkRAkaNSlAtlGKYkggaageeaAseSLfVkg Rabbit4Lib - -------------------------------------------------- - ykY<-* Rabbit4Lib - --- - // Query: Rabbit4Lib.1085.C1 774 1 529 nseq=2; minus strand; translated Scores for sequence family classification (score includes all domains): Model Description Score E-value N -------- ----------- ----- ------- --- Gelsolin Gelsolin repeat 87.2 3.3e-22 1 Parsed for domains: Model Domain seq-f seq-t hmm-f hmm-t score E-value -------- ------- ----- ----- ----- ----- ----- ------- Gelsolin 1/1 74 152 .. 1 96 [] 87.2 3.3e-22 Alignments of top-scoring domains: Gelsolin: domain 1 of 1, from 74 to 152: score 87.2, E = 3.3e-22 *->nfvlpppvplsqeslnsgdcyLLDngfkgglnyiiflWvGkkssqWR +++++ p +l qe+l ++d++LLD+++ ++f+WvGk s + Rabbit4Lib 74 FVIEEVPGELMQEDLATDDVMLLDTWD------QVFVWVGKDSQE-- 112 KagYhdPdeklaaallavelddaaqikqdrfplpvvdrvvqgkeparFl< dek++a+ +a++++++++ + r++++++ +v qg+ep++F+ Rabbit4Lib 113 -------DEKTEALTSAKRYIETDPAN--RDRRTPITVVKQGFEPPSFV 152 -* Rabbit4Lib - - // Query: Rabbit4Lib.1085.C2 1645 1 1265 nseq=3; translated Scores for sequence family classification (score includes all domains): Model Description Score E-value N -------- ----------- ----- ------- --- Gelsolin Gelsolin repeat 214.8 1.3e-60 3 Parsed for domains: Model Domain seq-f seq-t hmm-f hmm-t score E-value -------- ------- ----- ----- ----- ----- ----- ------- Gelsolin 1/3 71 146 .. 1 96 [] 80.9 2.6e-20 Gelsolin 2/3 187 253 .. 1 96 [] 46.6 5.4e-10 Gelsolin 3/3 290 368 .. 1 96 [] 87.2 3.3e-22 Alignments of top-scoring domains: Gelsolin: domain 1 of 3, from 71 to 146: score 80.9, E = 2.6e-20 *->nfvlpppvplsqeslnsgdcyLLDngfkgglnyiiflWvGkkssqWR ++v++++vp s++s+n+gdc++LD g+ +i++W+G+ks + Rabbit4Lib 71 RVVRATEVPVSWDSFNNGDCFILDLGN------DIYQWCGSKSKS-- 109 KagYhdPdeklaaallavelddaaqikqdrfplpvvdrvvqgkeparFl< l+a ++ ++++d++ r+++++v++ ++g ep+ +l Rabbit4Lib 110 -------LNXLKATQVSKGIRDNE-----RSGRAQVHVSEEGSEPEGML 146 -* Rabbit4Lib - - Gelsolin: domain 2 of 3, from 187 to 253: score 46.6, E = 5.4e-10 *->nfvlpppvplsqeslnsgdcyLLDngfkgglnyiiflWvGkkssqWR + ++ + p++q+ l+s+dc++LD+g+ +++i++W Gk+++ Rabbit4Lib 187 VSLVADENPFAQGALKSEDCFILDHGS----DGKIYVWKGKQANM-- 227 KagYhdPdeklaaallavelddaaqikqdrfplpvvdrvvqgkeparFl< +e++aa+ +a++++ +++ ++ + F+ Rabbit4Lib 228 -------EERKAALKTASDFISKMN----YP------------KXDGFW 253 -* Rabbit4Lib - - Gelsolin: domain 3 of 3, from 290 to 368: score 87.2, E = 3.3e-22 *->nfvlpppvplsqeslnsgdcyLLDngfkgglnyiiflWvGkkssqWR +++++ p +l qe+l ++d++LLD+++ ++f+WvGk s + Rabbit4Lib 290 FVIEEVPGELMQEDLATDDVMLLDTWD------QVFVWVGKDSQE-- 328 KagYhdPdeklaaallavelddaaqikqdrfplpvvdrvvqgkeparFl< dek++a+ +a++++++++ + r++++++ +v qg+ep++F+ Rabbit4Lib 329 -------DEKTEALTSAKRYIETDPAN--RDRRTPITVVKQGFEPPSFV 368 -* Rabbit4Lib - - // Query: Rabbit4Lib.1085.C3 617 1 503 nseq=4; minus strand; translated Scores for sequence family classification (score includes all domains): Model Description Score E-value N -------- ----------- ----- ------- --- Gelsolin Gelsolin repeat 87.2 3.3e-22 1 Parsed for domains: Model Domain seq-f seq-t hmm-f hmm-t score E-value -------- ------- ----- ----- ----- ----- ----- ------- Gelsolin 1/1 65 143 .. 1 96 [] 87.2 3.3e-22 Alignments of top-scoring domains: Gelsolin: domain 1 of 1, from 65 to 143: score 87.2, E = 3.3e-22 *->nfvlpppvplsqeslnsgdcyLLDngfkgglnyiiflWvGkkssqWR +++++ p +l qe+l ++d++LLD+++ ++f+WvGk s + Rabbit4Lib 65 FVIEEVPGELMQEDLATDDVMLLDTWD------QVFVWVGKDSQE-- 103 KagYhdPdeklaaallavelddaaqikqdrfplpvvdrvvqgkeparFl< dek++a+ +a++++++++ + r++++++ +v qg+ep++F+ Rabbit4Lib 104 -------DEKTEALTSAKRYIETDPAN--RDRRTPITVVKQGFEPPSFV 143 -* Rabbit4Lib - - // Query: Rabbit4Lib.1085.C4 1068 8 1016 nseq=2; minus strand; translated Scores for sequence family classification (score includes all domains): Model Description Score E-value N -------- ----------- ----- ------- --- Gelsolin Gelsolin repeat 98.5 1.3e-25 2 Parsed for domains: Model Domain seq-f seq-t hmm-f hmm-t score E-value -------- ------- ----- ----- ----- ----- ----- ------- Gelsolin 1/2 1 55 [. 1 96 [] 30.9 3e-05 Gelsolin 2/2 198 276 .. 1 96 [] 67.7 2.4e-16 Alignments of top-scoring domains: Gelsolin: domain 1 of 2, from 1 to 55: score 30.9, E = 3e-05 *->nfvlpppvplsqeslnsgdcyLLDngfkgglnyiiflWvGkkssqWR +v + g+ ii+ W+G +s+q Rabbit4Lib 1 TAVXQ--------------------GQ------IIYNWQGAQSTQ-- 19 KagYhdPdeklaaallavelddaaqikqdrfplpvvdrvvqgkeparFl< de +a+a+l+++ld++ ++++pv+ rvvqgkepa+++ Rabbit4Lib 20 -------DEVAASAILTAQLDEE------LGGTPVQSRVVQGKEPAHLM 55 -* Rabbit4Lib - - Gelsolin: domain 2 of 2, from 198 to 276: score 67.7, E = 2.4e-16 *->nfvlpppvplsqeslnsgdcyLLDngfkgglnyiiflWvGkkssqWR +++++ p +l qe+l ++d++LLD+++ ++f+Wv + + Rabbit4Lib 198 FVIEEVPGELMQEDLATDDVMLLDTWD------QVFVWVERILXE-- 236 KagYhdPdeklaaallavelddaaqikqdrfplpvvdrvvqgkeparFl< dek++a+ +a++++++++ + r++++++ +v qg+ep++F+ Rabbit4Lib 237 -------DEKTEALTSAKRYIETDPAN--RDRRTPITVVKQGFEPPSFV 276 -* Rabbit4Lib - - // Query: Rabbit4Lib.1088.C1 594 17 621 nseq=2; minus strand; translated Scores for sequence family classification (score includes all domains): Model Description Score E-value N -------- ----------- ----- ------- --- C2 C2 domain 26.6 0.00057 1 Parsed for domains: Model Domain seq-f seq-t hmm-f hmm-t score E-value -------- ------- ----- ----- ----- ----- ----- ------- C2 1/1 77 157 .. 1 88 [] 26.6 0.00057 Alignments of top-scoring domains: C2: domain 1 of 1, from 77 to 157: score 26.6, E = 0.00057 *->LrVtvieAknLppkDfkngksDPYVkvslggdkkdqkkkTkvikkt. L+Vtv++Ak ++ ++ +D + ++lg ++ T +++ Rabbit4Lib 77 LSVTVVQAKLAKNYG-MT-RMDRTAXLRLGY----AVYETPTAHXRc 117 lNPvWNEtFtFevpppdlqetLeieVyDydrfgrddflGevs<-* P+WN + + +pp +++ +e++D++ f+ dd + ++ Rabbit4Lib 118 QEPTWNKVIQCT-VPPGVDS-FYLEIFDERAFSMDDRIAWTH 157 // Query: Rabbit4Lib.1089.C1 719 1 779 nseq=5; minus strand; translated Scores for sequence family classification (score includes all domains): Model Description Score E-value N -------- ----------- ----- ------- --- Annexin Annexin 199.1 6.8e-56 2 Parsed for domains: Model Domain seq-f seq-t hmm-f hmm-t score E-value -------- ------- ----- ----- ----- ----- ----- ------- Annexin 1/2 50 117 .. 1 67 [] 89.4 7.2e-23 Annexin 2/2 126 192 .. 1 67 [] 112.9 6.1e-30 Alignments of top-scoring domains: Annexin: domain 1 of 2, from 50 to 117: score 89.4, E = 7.2e-23 *->ayDAe.lLrkAmkGlGTDEdtlIrILatRsnaqlqaIkeaYkklygk ++DA++l ++++ ++GTDE+ +I I++tRs +l+++++ Y +++g Rabbit4Lib 50 EQDAQtLFQAGELKWGTDEEKFITIFGTRSVSHLRRVFDKYMTISGF 96 dLekdiksetSGdfeklLlaL<-* +e+ i++etSG++e lLla+ Rabbit4Lib 97 QIEETIDRETSGNLEQLLLAV 117 Annexin: domain 2 of 2, from 126 to 192: score 112.9, E = 6.1e-30 *->ayDAelLrkAmkGlGTDEdtlIrILatRsnaqlqaIkeaYkklygkd ay Ae L+ AmkG+GTD+ tlIr++++Rs+++l I+++++k +g + Rabbit4Lib 126 AYLAETLYYAMKGAGTDDHTLIRVMVSRSEIDLYNIRKEFRKNFGTS 172 LekdiksetSGdfeklLlaL<-* L+++ik++tSGd++k+Ll L Rabbit4Lib 173 LYSMIKDDTSGDYKKALLLL 192 // Query: Rabbit4Lib.1092.C1 1234 1 732 nseq=4; minus strand; translated Scores for sequence family classification (score includes all domains): Model Description Score E-value N -------- ----------- ----- ------- --- Sad1_UNC Sad1 / UNC-like C-terminal 253.2 3.7e-72 1 Parsed for domains: Model Domain seq-f seq-t hmm-f hmm-t score E-value -------- ------- ----- ----- ----- ----- ----- ------- Sad1_UNC 1/1 107 241 .. 1 147 [] 253.2 3.7e-72 Alignments of top-scoring domains: Sad1_UNC: domain 1 of 1, from 107 to 241: score 253.2, E = 3.7e-72 *->lnyeaksprvilqedkDkympgpCwsfkgsrGfvvieLsepIiveav l+y+++sprvilq+d ++pg+Cw+f+g++Gf v++Ls I ++av Rabbit4Lib 107 LWYHSQSPRVILQPD---VHPGNCWAFQGPQGFAVVRLSARIRPTAV 150 tLeHveksvspdGnfsSAPKdFeVsgserypdeesTeewvlLGeFtYdld tLeHv+k++sp++++sSAP+dF+V+g +++ ++e +lLG+FtYd+d Rabbit4Lib 151 TLEHVPKALSPNSTISSAPRDFAVFGFDEDLQQE----GTLLGKFTYDQD 196 gknlQtFqlqnpCpyiekqswvkyVklrilSNyGnehYTClYrfRVhGts g+++QtF +q p ++ ++ V+lril+N+G+++YTC+YrfRVhG++ Rabbit4Lib 197 GEPIQTFYFQAP-AMA----SYQVVELRILTNWGHPEYTCIYRFRVHGEP 241 <-* Rabbit4Lib - - // Query: Rabbit4Lib.1096.C1 787 1 752 nseq=2; minus strand; translated Scores for sequence family classification (score includes all domains): Model Description Score E-value N -------- ----------- ----- ------- --- ADK Adenylate kinase 339.0 5.4e-98 1 ADK_lid Adenylate kinase, active site lid 79.6 6.6e-20 1 Parsed for domains: Model Domain seq-f seq-t hmm-f hmm-t score E-value -------- ------- ----- ----- ----- ----- ----- ------- ADK_lid 1/1 153 188 .. 1 37 [] 79.6 6.6e-20 ADK 1/1 31 217 .. 1 152 [] 339.0 5.4e-98 Alignments of top-scoring domains: ADK_lid: domain 1 of 1, from 153 to 188: score 79.6, E = 6.6e-20 *->RriCpnCGrvYHleFnPPKveGkCDvcGseeLvqReD<-* R+i+p++Gr+YH eFnPPK+++k+D++G e+L++R+D Rabbit4Lib 153 RLIHPTSGRSYHEEFNPPKEPMKDDITG-EPLIRRSD 188 ADK: domain 1 of 1, from 31 to 217: score 339.0, E = 5.4e-98 RF xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx *->LlGpPGaGKGTQAerIvkkygipHLSTGDlLRaevksgTelGkeAKe LlGpPGaGKGTQA+r++++++++HL+TGD+LRa+v+sg+elGk++K+ Rabbit4Lib 31 LLGPPGAGKGTQAPRLAENFCVCHLATGDMLRAMVASGSELGKKLKA 77 RF xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx yMDkGeLVPDEvviglvkerLeqnddcknGFLLDGFPRTvpQAeaLeemL +MD+G+LV+DE+v+ l++ Le + cknGFLLDGFPRTv QAe+L+ ++ Rabbit4Lib 78 TMDAGKLVSDEMVVELIEKNLETP-SCKNGFLLDGFPRTVRQAEMLDNLM 126 RF xxxxxxxxxxxxxxxxxxxxxxxxxx eeagiklDaVieldVpdevLveRltg........................ e+++ klD Vie+ +pd++L++R+tg+ +++++++ +++ ++++++ ++ Rabbit4Lib 127 EKRKEKLDSVIEFSIPDSLLIRRITGrlihptsgrsyheefnppkepmkd 176 RF xxxxxxxxxxxxxxxxxxxxxxxxxxxxx ............DneEtvkkRLetYhkqTePvIdyYkkkGk<-* + ++++ ++++Dne ++k+RLe+Yh+qT+P+++yY+k+G+ Rabbit4Lib 177 ditgeplirrsdDNEKALKIRLEAYHTQTTPLVEYYRKRGI 217 // Query: Rabbit4Lib.1097.C1 632 344 1073 nseq=3; minus strand; translated Scores for sequence family classification (score includes all domains): Model Description Score E-value N -------- ----------- ----- ------- --- [no hits above thresholds] Parsed for domains: Model Domain seq-f seq-t hmm-f hmm-t score E-value -------- ------- ----- ----- ----- ----- ----- ------- [no hits above thresholds] Alignments of top-scoring domains: [no hits above thresholds] // Query: Rabbit4Lib.1100.C2 214 446 777 nseq=3; translated Scores for sequence family classification (score includes all domains): Model Description Score E-value N -------- ----------- ----- ------- --- [no hits above thresholds] Parsed for domains: Model Domain seq-f seq-t hmm-f hmm-t score E-value -------- ------- ----- ----- ----- ----- ----- ------- [no hits above thresholds] Alignments of top-scoring domains: [no hits above thresholds] // Query: Rabbit4Lib.1100.C3 Scores for sequence family classification (score includes all domains): Model Description Score E-value N -------- ----------- ----- ------- --- [no hits above thresholds] Parsed for domains: Model Domain seq-f seq-t hmm-f hmm-t score E-value -------- ------- ----- ----- ----- ----- ----- ------- [no hits above thresholds] Alignments of top-scoring domains: [no hits above thresholds] // Query: Rabbit4Lib.1101.C1 1615 38 640 nseq=2; minus strand; translated Scores for sequence family classification (score includes all domains): Model Description Score E-value N -------- ----------- ----- ------- --- efhand EF hand 48.4 1.6e-10 2 Parsed for domains: Model Domain seq-f seq-t hmm-f hmm-t score E-value -------- ------- ----- ----- ----- ----- ----- ------- efhand 1/2 61 89 .. 1 29 [] 36.8 4.9e-07 efhand 2/2 166 194 .. 1 29 [] 12.6 5.2 Alignments of top-scoring domains: efhand: domain 1 of 2, from 61 to 89: score 36.8, E = 4.9e-07 *->elkeaFkefDkDgDGkIsfeEfkaalkkl<-* e+keaF+++D+++DG+I++e++ ++l++l Rabbit4Lib 61 EFKEAFNMIDQNRDGFIDKEDLHDMLASL 89 efhand: domain 2 of 2, from 166 to 194: score 12.6, E = 5.2 *->elkeaFkefDkDgDGkIsfeEfkaalkkl<-* e++e+ +e+ D+ G ++ Ef ++lk+ Rabbit4Lib 166 EVDEMYREAPIDKKGNFNYVEFTRILKHG 194 // Query: Rabbit4Lib.1105.C1 1215 1 1455 nseq=3; minus strand; translated Scores for sequence family classification (score includes all domains): Model Description Score E-value N -------- ----------- ----- ------- --- HALZ Homeobox associated leucine zipper -1.6 4.3 1 CSE2 RNA polymerase II transcription mediator -3.7 5.2 1 KE2 KE2 family protein -17.7 9.2 1 Prefoldin Prefoldin subunit -21.2 5 1 K-box K-box region -32.0 1.4 1 PspA_IM30 PspA/IM30 family -74.8 2.2 1 Parsed for domains: Model Domain seq-f seq-t hmm-f hmm-t score E-value -------- ------- ----- ----- ----- ----- ----- ------- CSE2 1/1 22 106 .. 1 92 [] -3.7 5.2 K-box 1/1 29 117 .. 1 103 [] -32.0 1.4 Prefoldin 1/1 16 117 .. 1 122 [] -21.2 5 KE2 1/1 24 118 .. 1 106 [] -17.7 9.2 HALZ 1/1 101 139 .. 1 45 [] -1.6 4.3 PspA_IM30 1/1 20 212 .. 1 241 [] -74.8 2.2 Alignments of top-scoring domains: CSE2: domain 1 of 1, from 22 to 106: score -3.7, E = 5.2 *->ivqcvdKDPlvnavkpeesqdlqheLakdLitkfqqinelIdqlPG. +++ D++ + +k+e ++ + eL k L+ k ++++e l + Rabbit4Lib 22 ALRAEITDAEGLGLKLEDRETVIKELKKSLKIKGEELSEANVRLSLl 68 ...idvSpeeQlqkIksLeeeLeekekerkeavkeKedLlrklykllem< ++++d +++++ ++I++ + L e + Llrk+ k+ e Rabbit4Lib 69 ekkLDSAAKDADERIEKVQTRL-----------EETQALLRKKEKDFEE 106 -* Rabbit4Lib - - K-box: domain 1 of 1, from 29 to 117: score -32.0, E = 1.4 *->yqkssgnsslwesntqnwqqEaaKLkaqienLQnnrnqRhllGEdLg ++ g l++ +t i L ++ + +GE+L+ Rabbit4Lib 29 DAEGLGLK-LEDRET------------VIKELK--KS-LKIKGEELS 59 sLslKELqqLEqqLEkgLkhIRsrKnql...lldqieelqkKErelqeeN + +++ L LE++L+++ k +r +++++l + l+kKE++ +e+ Rabbit4Lib 60 EANVR-LSLLEKKLDSAAKDADERIEKVqtrLEETQALLRKKEKDFEETM 108 kaLrkkiee<-* aL++ i+ Rabbit4Lib 109 DALQADIDQ 117 Prefoldin: domain 1 of 1, from 16 to 117: score -21.2, E = 5 *->lkqeiesLqaelaaLreaieeleksletlktlkkkeedegkevlvpl + +++L+ae++ +++ +le+ + +k+lkk + ++ ++ Rabbit4Lib 16 VELRAAALRAEITDAEGLGLKLEDRETVIKELKK-----SLKIKGEE 57 gaglfvkaevkdtdkvlVdlGagyyvEksleeAieildkrieelekqlek + + v+ + +Ek+l+ A + d+rie+++ le+ Rabbit4Lib 58 LSEANVRLSL---------------LEKKLDSAAKDADERIEKVQTRLEE 92 leeelekLrdqittleanlqqvqqk<-* ++ l+k+ + ++++++lq+ + Rabbit4Lib 93 TQALLRKKEKDFEETMDALQADIDQ 117 KE2: domain 1 of 1, from 24 to 118: score -17.7, E = 9.2 *->QelinkfqqLqqqleklaeqikqletqlkEielvleELelldedtkv +++i L +le+ ++ ik+ +k ++ eEL+ ++ Rabbit4Lib 24 RAEITDAEGLGLKLEDRETVIKE---LKKSLKIKGEELSEANVR--- 64 YklvGgvLVkqdkeevkeeLeerketlekeiktLekqleklekeleelke L++ +++ + ++ +er+e + ++++ + l+k+ek++ee + Rabbit4Lib 65 -----LSLLEKKLDSAAKDADERIEKVQTRLEETQALLRKKEKDFEETMD 109 elqkllgsa<-* lq+ + + Rabbit4Lib 110 ALQADIDQL 118 HALZ: domain 1 of 1, from 101 to 139: score -1.6, E = 4.3 *->KQLErDYelLKrcydsLkeendsLqkendeLrAevlslkeklqde<- E+D+e d+L+++ d L++e+ eL++ s+ ++ ++ Rabbit4Lib 101 ---EKDFEE---TMDALQADIDQLEAEKAELKQRLNSQSKRTIEG 139 * Rabbit4Lib - - [output cut off at A = 5 top alignments] // Query: Rabbit4Lib.1106.C1 385 121 366 nseq=2; minus strand; translated Scores for sequence family classification (score includes all domains): Model Description Score E-value N -------- ----------- ----- ------- --- [no hits above thresholds] Parsed for domains: Model Domain seq-f seq-t hmm-f hmm-t score E-value -------- ------- ----- ----- ----- ----- ----- ------- [no hits above thresholds] Alignments of top-scoring domains: [no hits above thresholds] // Query: Rabbit4Lib.1110.C1 325 852 1267 nseq=2; translated Scores for sequence family classification (score includes all domains): Model Description Score E-value N -------- ----------- ----- ------- --- [no hits above thresholds] Parsed for domains: Model Domain seq-f seq-t hmm-f hmm-t score E-value -------- ------- ----- ----- ----- ----- ----- ------- [no hits above thresholds] Alignments of top-scoring domains: [no hits above thresholds] // Query: Rabbit4Lib.1111.C1 857 15 1062 nseq=4; minus strand; translated Scores for sequence family classification (score includes all domains): Model Description Score E-value N -------- ----------- ----- ------- --- Brix Brix domain 223.5 3.1e-63 1 Parsed for domains: Model Domain seq-f seq-t hmm-f hmm-t score E-value -------- ------- ----- ----- ----- ----- ----- ------- Brix 1/1 145 319 .. 1 244 [] 223.5 3.1e-63 Alignments of top-scoring domains: Brix: domain 1 of 1, from 145 to 319: score 223.5, E = 3.1e-63 *->littsrkpskrtrqfakDLrrlfppsavryinRgerkPFeknslkdl litts +p++rt +++ L+ ++p+s + R+ + lk++ Rabbit4Lib 145 LITTSDRPHGRTVKLCEQLSTVIPNS--HVYYRR------GLALKKI 183 vevaekngctdlvivseskgnPlnLtigrlPnGPtlsFkisdmielklrk + ++ +++tdl++++e+++ P++L++++lPnGPt++Fk+s+ + l k Rabbit4Lib 184 IPQCISRDFTDLIVINEDRKTPNGLILSHLPNGPTAHFKMSS---VRLLK 230 dikssqfrgkkpteclfgtkPlLifnnfktespeeeklgkrikellqdlF +++ gk pte ++P++i+nnf+t +lg+ i+++++ lF Rabbit4Lib 231 KLRR----GKDPTE----HRPEIILNNFTT------RLGHSIGRMFASLF 266 pppnpdtkslnslkrVvtfsnqdDtgydnIfFRhYrirlktvgkskslkk p+ np+++ +++V tf+nq+D y IfFR +r+++ k Rabbit4Lib 267 PH-NPQFI----GRQVATFHNQRD--Y--IFFRFHRYIF----------K 297 nerlpkkvklne.vpnLgkleDiSdlvqsrvkLeEiGPRftlklrkie<- +++ + +++E+GPRftlklr ++ Rabbit4Lib 298 -----------SeK---------------KAGIQELGPRFTLKLRSLQ 319 * Rabbit4Lib - - // Query: Rabbit4Lib.1116.C1 339 1 311 nseq=5; minus strand; translated Scores for sequence family classification (score includes all domains): Model Description Score E-value N -------- ----------- ----- ------- --- TIM Triosephosphate isomerase -76.8 3.6e-05 1 Parsed for domains: Model Domain seq-f seq-t hmm-f hmm-t score E-value -------- ------- ----- ----- ----- ----- ----- ------- TIM 1/1 1 80 [. 1 252 [] -76.8 3.6e-05 Alignments of top-scoring domains: TIM: domain 1 of 1, from 1 to 80: score -76.8, E = 3.6e-05 *->piiaGNWKMNkatlaeakelakgLlaallknekskdnvevviaPpft Rabbit4Lib 1 ----------------------X------------------------ 1 yLssvkqalkgsniklllGAQNvsaedsGAfTGEvSaeMLkDlGvsyVIi ++ Rabbit4Lib 2 ------------TVR----------------------------------- 4 GHSERRqyFgEtdeivakKvkaAlkaGLtPilCVGEtLeeReagktleVl Rabbit4Lib - -------------------------------------------------- - krQlkaiLagldeealfknliIAYEPVWAIGTGkvAtpeqaqevHafIRk AIGTGk+Atp+qaqevH+ +R Rabbit4Lib 5 ----------------------------AIGTGKTATPQQAQEVHEKLRG 26 ylaelfskevaekirILYGGSVnpdNakeLlaqpdiDGfLVGGASLkaes +l++ +s +va+ +rI+YGGSV+ + +keL++qpd+DGfLVGGASLk+e Rabbit4Lib 27 WLKSNVSDAVAQSTRIIYGGSVTGATCKELASQPDVDGFLVGGASLKPE- 75 FlaIi<-* F++Ii Rabbit4Lib 76 FVDII 80 // Query: Rabbit4Lib.1117.C1 1595 97 990 nseq=2; minus strand; translated Scores for sequence family classification (score includes all domains): Model Description Score E-value N -------- ----------- ----- ------- --- Calsarcin Calcineurin-binding protein (Calsarcin) 519.7 2.1e-152 1 Parsed for domains: Model Domain seq-f seq-t hmm-f hmm-t score E-value -------- ------- ----- ----- ----- ----- ----- ------- Calsarcin 1/1 1 297 [] 1 311 [] 519.7 2.1e-152 Alignments of top-scoring domains: Calsarcin: domain 1 of 1, from 1 to 297: score 519.7, E = 2.1e-152 *->MipsnTmaknkKeqkspvmaelgglgeevpgLDLGKKlSVPrDlMLE M++s+T+a+nkK+++s++++el+g+g+e++gL+LGKK+SVPrD+MLE Rabbit4Lib 1 MPLSGTPAPNKKRKSSKLIMELTGGGQESSGLNLGKKISVPRDVMLE 47 ELSllnNRGSkLFkkRQrRvqKFtFEnfqsvfadlamsarqkvigtvngs ELSll+NRGSk+Fk+RQ Rv+KF++En+++vf+d++m+ +qk+ +tv+g+ Rabbit4Lib 48 ELSLLTNRGSKMFKLRQMRVEKFIYENHPDVFSDSSMDHFQKFLPTVGGQ 97 lvtngqgvegsnleggsqafpsspagqyGspqqhHpqaagsGSvpspsal l+t+gqgv++s+ +gg+qa+ s++agq+ + + v + Rabbit4Lib 98 LGTAGQGVSYSKGSGGGQAGGSGSAGQLALTTSTIMALGLELEVQVVLGV 147 APGyagPGGhsGRGGaLLkgvPPEkFnhtAvPKgYrsPWeeaiSydpelk + G ++ ++ ++h++v+K+Y+sPWe+a++ dp++k Rabbit4Lib 148 RLAKEELLVQEXVGETGSGDQTGGDGKHITVFKTYISPWERAMGVDPQQK 197 veLyidLyksggkaelPiPrdYrsFnrtavPFGGPlVreaifekaskfvk veL+idL+++g+kaelP +Y+sFnrta+P+GG +ekask+++ Rabbit4Lib 198 VELGIDLLAYGAKAELP---KYKSFNRTAMPYGG-------YEKASKRMT 237 fklpgfeLLrLlderlvlyvnnLSnRPSFNRtpqGWvseniPvvitvdis f++p+f+L++Ll+e+lvly++nLSnRPSFNRtp++W+s+++ ++ vdi Rabbit4Lib 238 FQMPKFDLGPLLSEPLVLYNQNLSNRPSFNRTPIPWLSSGEHADYHVDIG 287 DDttlPLDGESEeL<-* +PLDGE+EeL Rabbit4Lib 288 ----IPLDGETEEL 297 // Query: Rabbit4Lib.1119.C1 97 1 569 nseq=3; minus strand; translated Scores for sequence family classification (score includes all domains): Model Description Score E-value N -------- ----------- ----- ------- --- [no hits above thresholds] Parsed for domains: Model Domain seq-f seq-t hmm-f hmm-t score E-value -------- ------- ----- ----- ----- ----- ----- ------- [no hits above thresholds] Alignments of top-scoring domains: [no hits above thresholds] // Query: Rabbit4Lib.1120.C1 1389 27 828 nseq=2; minus strand; translated Scores for sequence family classification (score includes all domains): Model Description Score E-value N -------- ----------- ----- ------- --- [no hits above thresholds] Parsed for domains: Model Domain seq-f seq-t hmm-f hmm-t score E-value -------- ------- ----- ----- ----- ----- ----- ------- [no hits above thresholds] Alignments of top-scoring domains: [no hits above thresholds] // Query: Rabbit4Lib.1121.C1 1391 1 592 nseq=2; minus strand; translated Scores for sequence family classification (score includes all domains): Model Description Score E-value N -------- ----------- ----- ------- --- adh_short short chain dehydrogenase 5.7 1.2e-05 1 DUF638 Possible hemagglutinin (DUF638) -21.9 7.2 1 Parsed for domains: Model Domain seq-f seq-t hmm-f hmm-t score E-value -------- ------- ----- ----- ----- ----- ----- ------- DUF638 1/1 58 106 .. 1 53 [] -21.9 7.2 adh_short 1/1 1 121 [. 1 191 [] 5.7 1.2e-05 Alignments of top-scoring domains: DUF638: domain 1 of 1, from 58 to 106: score -21.9, E = 7.2 *->dpatLsdkeraKIiAYSKLvAGtvaAvvGGDVNTAANAAevAVeNNa d+ + + +I A ++ G+ A VN+ +A+ A N + Rabbit4Lib 58 DVNLRAVIQVSQIVARGMIARGAPGAI----VNVSSQASHRALTNHS 100 Lnaret<-* ++ Rabbit4Lib 101 VYCSTK 106 adh_short: domain 1 of 1, from 1 to 121: score 5.7, E = 1.2e-05 *->GTvLiTGGtGGLGlavARwLveehGarhLvLvsRrglerewdtslGp + +s Rabbit4Lib 1 ---------------------XH--------AS-------------- 4 dapgaaeLrpiavaeLealGaeVtvaacDvaDrdalaallaaipkaaegP a V+ + +D++D++a +++l ++ P Rabbit4Lib 5 --------------------AGVEPVCVDLGDWEATERALGGVG-----P 29 LtgVvHaAGvldDgvlasltperlaaVlapKvdgAwnLheltrdlmikld ++ +v++AGv+ ++ + t e+ ++ +++++ ++ + + ++ mi+++ Rabbit4Lib 30 VDLLVNNAGVALLQPFLEVTKEACDTSFDVNLRAVIQVSQIVARGMIARG 79 rgeLdaFVlFSSaAgvlGspGQanYAAANAfLDaLAehRraeGL<-* +a+V++SS A+ ++Y + +++LD+L++ ++ e+ Rabbit4Lib 80 --APGAIVNVSSQASHRALTNHSVYCSTKGALDMLTKVMALELG 121 // Query: Rabbit4Lib.1125.C1 1426 1 677 nseq=2; minus strand; translated Scores for sequence family classification (score includes all domains): Model Description Score E-value N -------- ----------- ----- ------- --- ECH Enoyl-CoA hydratase/isomerase family 217.2 2.4e-61 1 Parsed for domains: Model Domain seq-f seq-t hmm-f hmm-t score E-value -------- ------- ----- ----- ----- ----- ----- ------- ECH 1/1 1 151 [. 1 176 [] 217.2 2.4e-61 Alignments of top-scoring domains: ECH: domain 1 of 1, from 1 to 151: score 217.2, E = 2.4e-61 *->avikldrPeeavNalsaelltElieAlekleqDpsvravVLtGagpg ++lekle+D+ +r+vVLt+++p Rabbit4Lib 1 --------X--------------HASLEKLENDKGFRGVVLTSDCPS 25 aFsaGaDikemaagfkeplaeqaqfsleaqdlwskledlpkPViAAVNGy +FsaG+D++em++ ++p a++a++++ +q+lw +l+ ++++++AA+NG+ Rabbit4Lib 26 VFSAGLDLTEMCG--RNP-AHYAEYWKAVQELWLRLYLSNLVLVAAINGA 72 AlGGGlelALacDyrIAadnAkyvfGlpEvklGiiPGaGGtqrLpRivGv +++GG+++AL+cDyr++adn+ky++Gl+E++lGi+++++++++L+++vG+ Rabbit4Lib 73 CPAGGCLMALTCDYRVMADNPKYTIGLNETQLGIVAPFWFKDTLVNTVGH 122 saAlemiltGrrirAqEAlkmGlVdkVVp<-* + A+ ++++G + ++EAl++GlVd+VVp Rabbit4Lib 123 RVAEQALQLGLLFPPAEALRVGLVDRVVP 151 // Query: Rabbit4Lib.1126.C1 1566 70 787 nseq=2; minus strand; translated Scores for sequence family classification (score includes all domains): Model Description Score E-value N -------- ----------- ----- ------- --- Filament_head Intermediate filament head (DNA binding 86.3 6.1e-22 1 Filament Intermediate filament protein -7.5 7.4e-09 1 DUF947 Domain of unknown function (DUF947) -85.4 9.4 1 Vicilin_N Vicilin N terminal region -87.7 7.2 1 E-MAP-115 E-MAP-115 family -103.3 7.1 1 Parsed for domains: Model Domain seq-f seq-t hmm-f hmm-t score E-value -------- ------- ----- ----- ----- ----- ----- ------- Filament_head 1/1 12 94 .. 1 105 [] 86.3 6.1e-22 Vicilin_N 1/1 74 174 .. 1 183 [] -87.7 7.2 DUF947 1/1 43 195 .. 1 205 [] -85.4 9.4 E-MAP-115 1/1 49 235 .. 1 193 [] -103.3 7.1 Filament 1/1 95 240 .] 1 359 [] -7.5 7.4e-09 Alignments of top-scoring domains: Filament_head: domain 1 of 1, from 12 to 94: score 86.3, E = 6.1e-22 *->tssSSYRRtfGdetRlSassPrvSssspRSgFrSrgssssssvStSr ss+SYRR fG +++l sP ++ ++ +sss++S Sr Rabbit4Lib 12 ISSTSYRRAFGPPPSL---SP-GA-----YS------YSSSRFSGSR 43 svysvsqRSsaPspslsSsRssrlapsrlppSlaygagDsLDFSlAdAlN +++s +S+ +s++l+S+R+ r + ++ l+++++++LDFS+A+AlN Rabbit4Lib 44 --LLGS-ASPSSSVRLGSFRGPRAGAGA----LLRLPSERLDFSMAEALN 86 nEFKatRT<-* +EF+atR+ Rabbit4Lib 87 QEFLATRS 94 Vicilin_N: domain 1 of 1, from 74 to 174: score -87.7, E = 7.2 *->pGRrnYeDDPqqrYEqCqRRCesetrGqrEQqqCEeRCkeqykEeqq + R + Q+ R+ E+q+ Rabbit4Lib 74 SERLD-----------------FSMAEALNQEFLATRS----NEKQE 99 qqRqReEDPQrrYeeCqqrCqqeETEeRhrptCqQrCerrYEkeqqqQQK q ++ r+ ++ + E qQ r E q + Rabbit4Lib 100 LQ-----ELNDRFANFIEKVRFLE---------QQNAALRGELSQAR--- 132 RYEEQQREDEEKYEERmKEEDNKRDPqqRqyqeCQqRCqqQEQrPrrqQQ QE P r Q Rabbit4Lib 133 ---------------------------------------GQE--PARADQ 141 .CqReCREQYqEqqerGeeenknPQWReeeeersEEG<-* Cq e RE +E G+e+ e + E Rabbit4Lib 142 lCQQELRELRRELELLGRERDRV----QVERDALAED 174 DUF947: domain 1 of 1, from 43 to 195: score -85.4, E = 9.4 *->krknKhrPlEmSSKKPVsrfRevvgvEepKKkakkLlRDP..RFDds ++++ P SS ++ fR + p+ a LlR P++R D s Rabbit4Lib 43 RLLGSASP---SSSVRLGSFR----G--PRAGAGALLRLPseRLDFS 80 lsGslnaevvDEikfrKnYqFLdeiRekvEiqqLkkk.......LkktkF + +ln e FL R E+q+L+ +++ + + k++F Rabbit4Lib 81 MAEALNQE------------FLA-TRSN-EKQELQELndrfanfIEKVRF 116 LaeiDqeEkeeLkqtLksmeskekearkekekerellkElkkkekerike L + +++ + eL q+ e ++ + + rel+ El+ +er+ Rabbit4Lib 117 LEQQNAALRGELSQA-RGQEPARA-DQLCQQELRELRRELELLGRERDR- 163 GkkPyYLkKsEqRKivlveLSKyksLKkskKleKKTLqKERKRNiKPTKK ++ + +l+e + LK + le Rabbit4Lib 164 ---------VQVERDALAE--DLAALK--QRLEE---------------- 184 KiylekKRKKnagKdkK<-* e +++ a ++ Rabbit4Lib 185 ----ETRKREDA--EHN 195 E-MAP-115: domain 1 of 1, from 49 to 235: score -103.3, E = 7.1 *->APgkaensaAlsKptAGTTDaeEAtrLLAEKRRqAReQrEkEEqERr +P++ + p AG a+ rL E R+ E qE Rabbit4Lib 49 SPSSSVRLGSFRGPRAG---AGALLRLPSE--RLDFSMAEALNQEFL 90 eqeErdrrkREElkrraaE....eRtlrrEeEARrrEeeraRekeekKKq ++++ El r a ++ R l+ A r E +aR e + Rabbit4Lib 91 ATRSNEKQELQELNDRFANfiekVRFLEQQNAALRGELSQARGQEPA--- 137 EGEEKRKAGEElkRkAEEeLLLKekrEqEeqEr.Amiq.....kQKEeAE El+ E LL r + Er+A++++ kQ e E Rabbit4Lib 138 --RADQLCQQELRELRRELELLGRERDRVQVERdALAEdlaalKQRLEEE 185 araREeAErvRlEREkhfqqeEQERlERkKRLeEIMKRTRksevsekVKk +r RE AE k RlE +e M + e Kk Rabbit4Lib 186 TRKREDAEHNLVLFRKDVDDATLSRLELERKIESLM------DEIEFLKK 229 eDskeG<-* e Rabbit4Lib 230 LHEEEL 235 Filament: domain 1 of 1, from 95 to 240: score -7.5, E = 7.4e-09 *->nEKeqmQnLNDRLAsYIdKVRfLEqqNkeLevkieelrqkqsrggpa nEK+++Q+LNDR+A++I+KVRfLEqqN++L++++++ r++++ Rabbit4Lib 95 NEKQELQELNDRFANFIEKVRFLEQQNAALRGELSQARGQEP----- 136 svsrlyslYeteieeLRrqidqltnerarlqlEidnlrealedfrkKyed +r ++l+++e++eLRr+++ l++er+r+q+E+d l+e+l+ +++++e+ Rabbit4Lib 137 --ARADQLCQQELRELRRELELLGRERDRVQVERDALAEDLAALKQRLEE 184 KeDLaaQnqlkdlEialntkeaeLaTaLeRqeaEndlvgLRaQiAklEsl E ++ R+ aE++lv + Rabbit4Lib 185 -------------ETRK------------REDAEHNLVLF---------- 199 aaRkdlDeaTLarvDLEnkvEsLqEElaFLKknHeEEvkeLqaqiqdtgq Rkd+D+aTL+r++LE+k+EsL++E++FLKk+HeEE+++Lq Rabbit4Lib 200 --RKDVDDATLSRLELERKIESLMDEIEFLKKLHEEELRDLQ-----X-- 240 vnVEmDaarqqEwklDLtkaLrEiRaQYEeiAeknrqeaEewYksKleeL Rabbit4Lib - -------------------------------------------------- - qtaaarngealrsaKeEitElRRqiQsLeiELqslksqnasLErqlaElE Rabbit4Lib - -------------------------------------------------- - eryeaelaqyqalisqlEeeLqqlreEMarqLrEYQeLLdVKlaLDiEIA Rabbit4Lib - -------------------------------------------------- - TYRKLLEGEEsR<-* Rabbit4Lib - ------------ - // Query: Rabbit4Lib.1126.C3 1244 1 624 nseq=5; minus strand; translated Scores for sequence family classification (score includes all domains): Model Description Score E-value N -------- ----------- ----- ------- --- Filament Intermediate filament protein 19.1 5.2e-10 1 Mod_r Modifier of rudimentary (Mod(r)) protein -49.9 3.1 1 Parsed for domains: Model Domain seq-f seq-t hmm-f hmm-t score E-value -------- ------- ----- ----- ----- ----- ----- ------- Filament 1/1 1 142 [. 1 359 [] 19.1 5.2e-10 Mod_r 1/1 46 173 .. 1 153 [] -49.9 3.1 Alignments of top-scoring domains: Filament: domain 1 of 1, from 1 to 142: score 19.1, E = 5.2e-10 *->nEKeqmQnLNDRLAsYIdKVRfLEqqNkeLevkieelrqkqsrggpa Rabbit4Lib - ----------------------------------------------- - svsrlyslYeteieeLRrqidqltnerarlqlEidnlrealedfrkKyed Rabbit4Lib - -------------------------------------------------- - KeDLaaQnqlkdlEialntkeaeLaTaLeRqeaEndlvgLRaQiAklEsl Rabbit4Lib 1 ----------------X--------------------------------- 1 aaRkdlDeaTLarvDLEnkvEsLqEElaFLKknHeEEvkeLqaqiqdtgq ++++ Rabbit4Lib 2 --------------------------------------------HASR-- 5 vnVEmDaarqqEwklDLtkaLrEiRaQYEeiAeknrqeaEewYksKleeL V QYE iA+kn+qeaEewYksK+++L Rabbit4Lib 6 --V-----------------------QYETIAAKNLQEAEEWYKSKYADL 30 qtaaarngealrsaKeEitElRRqiQsLeiELqslksqnasLErqlaElE ++aa+rn+ealr+aK+E++E RRqiQsL++E+++l+++n++L rql+ElE Rabbit4Lib 31 SDAANRNHEALRQAKQEMNESRRQIQSLTCEVDGLRGTNEALLRQLRELE 80 eryeaelaqyqalisqlEeeLqqlreEMarqLrEYQeLLdVKlaLDiEIA e++++e+ +yqa ++lEeeL+ql+eEMar+LrEYQeLL+VK+aLDiEIA Rabbit4Lib 81 EQFALEAGGYQAGAARLEEELRQLKEEMARHLREYQELLNVKMALDIEIA 130 TYRKLLEGEEsR<-* TYRKLLEGEEsR Rabbit4Lib 131 TYRKLLEGEESR 142 Mod_r: domain 1 of 1, from 46 to 173: score -49.9, E = 3.1 *->LkdLSldELreLlqDedkldelfvaelpqvqdlnlekdallaqnesL +e+++ +++++ +++ v l+ + +all q ++L Rabbit4Lib 46 ---------QEMNESRRQIQS--LTCE--VDGLRGTNEALLRQLREL 79 AeeNLekepqLeel..kaqlqIdkyeelrkLeekyeekkqqldelissky +e + Le+++ +a + + eelr+L+e+ ++ +++++el Rabbit4Lib 80 EEQF-----ALEAGgyQAGAA-RLEEELRQLKEEMARHLREYQEL----- 118 SpetllalLQvaaaeaeEESEelaekFleGeid.ldtFLkky..kdkRtl +++ L +++a+ k+leGe++++ + + ++ +++++t+ Rabbit4Lib 119 --LNVKMALDIEIATY--------RKLLEGEESrIAVPIHSFasLNIKTT 158 .........yHlRRaKeEKL<-* ++ ++++++H+R K+ Rabbit4Lib 159 vpeaeppqdSHSR-----KM 173 // Query: Rabbit4Lib.1126.C4 2845 1 1433 nseq=2; minus strand; translated Scores for sequence family classification (score includes all domains): Model Description Score E-value N -------- ----------- ----- ------- --- Filament Intermediate filament protein 531.0 8.2e-156 1 Filament_head Intermediate filament head (DNA binding 86.3 6.1e-22 1 Mod_r Modifier of rudimentary (Mod(r)) protei -49.9 3.1 1 DUF947 Domain of unknown function (DUF947) -85.4 9.4 1 Vicilin_N Vicilin N terminal region -87.7 7.2 1 DUF164 Uncharacterized ACR, COG1579 -95.0 7.8 1 E-MAP-115 E-MAP-115 family -103.3 7.1 1 Parsed for domains: Model Domain seq-f seq-t hmm-f hmm-t score E-value -------- ------- ----- ----- ----- ----- ----- ------- Filament_head 1/1 20 102 .. 1 105 [] 86.3 6.1e-22 Vicilin_N 1/1 82 182 .. 1 183 [] -87.7 7.2 DUF947 1/1 51 203 .. 1 205 [] -85.4 9.4 E-MAP-115 1/1 57 243 .. 1 193 [] -103.3 7.1 DUF164 1/1 215 411 .. 1 235 [] -95.0 7.8 Filament 1/1 103 413 .. 1 359 [] 531.0 8.2e-156 Mod_r 1/1 317 444 .. 1 153 [] -49.9 3.1 Alignments of top-scoring domains: Filament_head: domain 1 of 1, from 20 to 102: score 86.3, E = 6.1e-22 *->tssSSYRRtfGdetRlSassPrvSssspRSgFrSrgssssssvStSr ss+SYRR fG +++l sP ++ ++ +sss++S Sr Rabbit4Lib 20 ISSTSYRRAFGPPPSL---SP-GA-----YS------YSSSRFSGSR 51 svysvsqRSsaPspslsSsRssrlapsrlppSlaygagDsLDFSlAdAlN +++s +S+ +s++l+S+R+ r + ++ l+++++++LDFS+A+AlN Rabbit4Lib 52 --LLGS-ASPSSSVRLGSFRGPRAGAGA----LLRLPSERLDFSMAEALN 94 nEFKatRT<-* +EF+atR+ Rabbit4Lib 95 QEFLATRS 102 Vicilin_N: domain 1 of 1, from 82 to 182: score -87.7, E = 7.2 *->pGRrnYeDDPqqrYEqCqRRCesetrGqrEQqqCEeRCkeqykEeqq + R + Q+ R+ E+q+ Rabbit4Lib 82 SERLD-----------------FSMAEALNQEFLATRS----NEKQE 107 qqRqReEDPQrrYeeCqqrCqqeETEeRhrptCqQrCerrYEkeqqqQQK q ++ r+ ++ + E qQ r E q + Rabbit4Lib 108 LQ-----ELNDRFANFIEKVRFLE---------QQNAALRGELSQAR--- 140 RYEEQQREDEEKYEERmKEEDNKRDPqqRqyqeCQqRCqqQEQrPrrqQQ QE P r Q Rabbit4Lib 141 ---------------------------------------GQE--PARADQ 149 .CqReCREQYqEqqerGeeenknPQWReeeeersEEG<-* Cq e RE +E G+e+ e + E Rabbit4Lib 150 lCQQELRELRRELELLGRERDRV----QVERDALAED 182 DUF947: domain 1 of 1, from 51 to 203: score -85.4, E = 9.4 *->krknKhrPlEmSSKKPVsrfRevvgvEepKKkakkLlRDP..RFDds ++++ P SS ++ fR + p+ a LlR P++R D s Rabbit4Lib 51 RLLGSASP---SSSVRLGSFR----G--PRAGAGALLRLPseRLDFS 88 lsGslnaevvDEikfrKnYqFLdeiRekvEiqqLkkk.......LkktkF + +ln e FL R E+q+L+ +++ + + k++F Rabbit4Lib 89 MAEALNQE------------FLA-TRSN-EKQELQELndrfanfIEKVRF 124 LaeiDqeEkeeLkqtLksmeskekearkekekerellkElkkkekerike L + +++ + eL q+ e ++ + + rel+ El+ +er+ Rabbit4Lib 125 LEQQNAALRGELSQA-RGQEPARA-DQLCQQELRELRRELELLGRERDR- 171 GkkPyYLkKsEqRKivlveLSKyksLKkskKleKKTLqKERKRNiKPTKK ++ + +l+e + LK + le Rabbit4Lib 172 ---------VQVERDALAE--DLAALK--QRLEE---------------- 192 KiylekKRKKnagKdkK<-* e +++ a ++ Rabbit4Lib 193 ----ETRKREDA--EHN 203 E-MAP-115: domain 1 of 1, from 57 to 243: score -103.3, E = 7.1 *->APgkaensaAlsKptAGTTDaeEAtrLLAEKRRqAReQrEkEEqERr +P++ + p AG a+ rL E R+ E qE Rabbit4Lib 57 SPSSSVRLGSFRGPRAG---AGALLRLPSE--RLDFSMAEALNQEFL 98 eqeErdrrkREElkrraaE....eRtlrrEeEARrrEeeraRekeekKKq ++++ El r a ++ R l+ A r E +aR e + Rabbit4Lib 99 ATRSNEKQELQELNDRFANfiekVRFLEQQNAALRGELSQARGQEPA--- 145 EGEEKRKAGEElkRkAEEeLLLKekrEqEeqEr.Amiq.....kQKEeAE El+ E LL r + Er+A++++ kQ e E Rabbit4Lib 146 --RADQLCQQELRELRRELELLGRERDRVQVERdALAEdlaalKQRLEEE 193 araREeAErvRlEREkhfqqeEQERlERkKRLeEIMKRTRksevsekVKk +r RE AE k RlE +e M + e Kk Rabbit4Lib 194 TRKREDAEHNLVLFRKDVDDATLSRLELERKIESLM------DEIEFLKK 237 eDskeG<-* e Rabbit4Lib 238 LHEEEL 243 DUF164: domain 1 of 1, from 215 to 411: score -95.0, E = 7.8 *->mknelksLvkiqeidkekerLeerikeipkeLkkakellealkkeve + l++ +ki+ + +++ e ++k +++eL ++ e + + Rabbit4Lib 215 TLSRLELERKIESL---MDEIEFLKKLHEEELRDLQVSVESQQVQQV 258 eleqeke.....elkeevkkle....keiqeieekikkaEekmdeiktqr e e +++ + +l+ + e+ k +qe+ee k+ ++ r Rabbit4Lib 259 EMEATVKpeltaALRIYXVQYEtiaaKNLQEAEEWYKSKYADLSD-AANR 307 EYkALerElqkakdkevtlrkeieqleeelkkieeeieelkeeilkqEke +AL + +q+ ++ ++++ + +++ + +e +l+q Rabbit4Lib 308 NHEALRQAKQEMNESRRQIQSLTCEVDG--------LRGTNEALLRQ--- 346 leeeeeevelEvrkikekvlellskreelkektdedllsfYERiiknkkn l+e+ee++ lE + +l+++ ++lke++ ++ l Y+++++ k Rabbit4Lib 347 LRELEEQFALEAGGYQAGAARLEEELRQLKEEMARH-LREYQELLNVKMA 395 lviVPiennvCaGChiiLpsqfenkVrkePddivfCPyCSRILYyee<-* + + + k +++ ee Rabbit4Lib 396 ---------------LDIEIATYRKLLEG----------------EE 411 [output cut off at A = 5 top alignments] // Query: Rabbit4Lib.1126.C5 969 1 672 nseq=19; minus strand; translated Scores for sequence family classification (score includes all domains): Model Description Score E-value N -------- ----------- ----- ------- --- Filament Intermediate filament protein 120.5 3.1e-32 1 DUF827 Plant protein of unknown function (DUF827) -128.6 4.9 1 Parsed for domains: Model Domain seq-f seq-t hmm-f hmm-t score E-value -------- ------- ----- ----- ----- ----- ----- ------- DUF827 1/1 3 137 .. 1 551 [] -128.6 4.9 Filament 1/1 1 167 [. 1 359 [] 120.5 3.1e-32 Alignments of top-scoring domains: DUF827: domain 1 of 1, from 3 to 137: score -128.6, E = 4.9 *->sAPFeSVKEAVtlFGgiafWKahyatRLkklqsserrktvsfedVsd q++e+++ + Rabbit4Lib 3 -----------------------------QAQIQEQHVQI------- 13 eetELekvqkeapelKkeLenaEreklqV.LkELEsTKrtveeLklkLEk +V++ ++ +L+ L Rabbit4Lib 14 ---------------------------DVdV---SK-----PDLTAAL-- 26 aekeeqqAkqdsElAklRvEEmEqGiadeASVaaktqlEVAkEryisats Rabbit4Lib - -------------------------------------------------- - ELdsvKeELekvrqeynslleEKdlAlkrAEEAvlaskvvekkveeLtkE Rabbit4Lib - -------------------------------------------------- - liAtKeslEsahaaHleAeEerigiamekdqdreayekelkeAeeeLqrL ++ Rabbit4Lib 27 -----------------------------------------------RDV 29 nqeldpELkkDlkakLdeasaeledLkeElaaykeSkikeEaevieeege +q++++ +k l+ E + Sk Rabbit4Lib 30 RQQYESVAAKNLQ---------------EAEEWYKSK------------- 51 iaaqesshdimssvasitkELeeA....KmnLeKaaeEekslrslveSLk + +L+eA ++++ L a++E++++r v SL+ Rabbit4Lib 52 -----------------FADLSEAanrnNDALRQAKQESNEYRRQVQSLT 84 qELeeeKaeleelrqREgeasiavaSLeaELsRtksEIelvkskEkearE E + K +e+l+ Rabbit4Lib 85 CEVDALKGTNESLE------------------------------------ 98 ekmvElpkklqqasrEAeeaKkeAenareelrkakeEaEqaktalstaEk +++++E+ Rabbit4Lib 99 ------------------------------------------RQMREMEE 106 rLvaArKeiEaAKaaEklAiaeIKaLqeseesqkndeiesSprsItisle + A+++ + +d+ Rabbit4Lib 107 NF----------------AVEAA---------NYQDT------------- 118 EyeeLskraeEaEelvnfrvaealaqvEeakeseseiLeKLEeaekeiee L ei Rabbit4Lib 119 ----------------------------------IGRLQD------EIQN 128 kKaaleeAl<-* +K++ ++l Rabbit4Lib 129 MKEEMARHL 137 Filament: domain 1 of 1, from 1 to 167: score 120.5, E = 3.1e-32 *->nEKeqmQnLNDRLAsYIdKVRfLEqqNkeLevkieelrqkqsrggpa Rabbit4Lib - ----------------------------------------------- - svsrlyslYeteieeLRrqidqltnerarlqlEidnlrealedfrkKyed Rabbit4Lib - -------------------------------------------------- - KeDLaaQnqlkdlEialntkeaeLaTaLeRqeaEndlvgLRaQiAklEsl Rabbit4Lib - -------------------------------------------------- - aaRkdlDeaTLarvDLEnkvEsLqEElaFLKknHeEEvkeLqaqiqdtgq eLqaqiq++ + Rabbit4Lib 1 ---------------------------------------ELQAQIQEQ-H 10 vnVEmDaarqqEwklDLtkaLrEiRaQYEeiAeknrqeaEewYksKleeL v+ ++D++ k+DLt+aLr++R+QYE+ A+kn+qeaEewYksK+++L Rabbit4Lib 11 VQIDVDVS-----KPDLTAALRDVRQQYESVAAKNLQEAEEWYKSKFADL 55 qtaaarngealrsaKeEitElRRqiQsLeiELqslksqnasLErqlaElE ++aa+rn++alr+aK+E +E+RRq+QsL++E+++lk++n+sLErq++E+E Rabbit4Lib 56 SEAANRNNDALRQAKQESNEYRRQVQSLTCEVDALKGTNESLERQMREME 105 eryeaelaqyqalisqlEeeLqqlreEMarqLrEYQeLLdVKlaLDiEIA e ++ e+a+yq++i++l++e+q+++eEMar+LrEYQ+LL+VK+aLDiEIA Rabbit4Lib 106 ENFAVEAANYQDTIGRLQDEIQNMKEEMARHLREYQDLLNVKMALDIEIA 155 TYRKLLEGEEsR<-* TYRKLLEGEEsR Rabbit4Lib 156 TYRKLLEGEESR 167 // Query: Rabbit4Lib.1130.C1 941 1 1086 nseq=2; minus strand; translated Scores for sequence family classification (score includes all domains): Model Description Score E-value N -------- ----------- ----- ------- --- DUF1610 Domain of unknown function (DUF1610) 5.3 5.6 1 zf-C3HC4 Zinc finger, C3HC4 type (RING finger) 4.3 0.36 1 zf-P11 P-11 zinc finger -9.0 10 1 zf-C2HC5 Putative zinc finger motif, C2HC5-type -10.4 5.4 1 E-MAP-115 E-MAP-115 family -100.0 4.6 1 Parsed for domains: Model Domain seq-f seq-t hmm-f hmm-t score E-value -------- ------- ----- ----- ----- ----- ----- ------- zf-C3HC4 1/1 21 59 .. 1 50 [] 4.3 0.36 DUF1610 1/1 41 61 .. 1 24 [] 5.3 5.6 zf-P11 1/1 18 69 .. 1 50 [] -9.0 10 zf-C2HC5 1/1 18 75 .. 1 56 [] -10.4 5.4 E-MAP-115 1/1 53 205 .. 1 193 [] -100.0 4.6 Alignments of top-scoring domains: zf-C3HC4: domain 1 of 1, from 21 to 59: score 4.3, E = 0.36 *->CrICleelkepsndfplilpCgHsGslkyfCrsClerwlsssgnttC + +ps +++ CgH+ C+sC+ + +g +C Rabbit4Lib 21 ----TTKYRNPSLK-LMVNVCGHT-----LCESCVDLLFV-RGAGNC 56 plC<-* p C Rabbit4Lib 57 PEC 59 DUF1610: domain 1 of 1, from 41 to 61: score 5.3, E = 5.6 *->CtsCGaelaprelgvkypCPnCGf<-* C+sC l r+ g+ CP+CG Rabbit4Lib 41 CESCVDLLFVRGAGN---CPECGT 61 zf-P11: domain 1 of 1, from 18 to 69: score -9.0, E = 10 *->GplnCKsCWfkdknLveCsdHYLClrClqll.LsvSerCpiCkkPLP G K k +v H LC C ll + Cp C PL Rabbit4Lib 18 GVKTTKYRNPSLKLMVNVCGHTLCESCVDLLfVRGAGNCPECGTPLR 64 Tk.lr<-* ++ r Rabbit4Lib 65 KSnFR 69 zf-C2HC5: domain 1 of 1, from 18 to 75: score -10.4, E = 5.4 *->gRrpCdCqarkHkLneainNCLgCGrIVCe.......qEGsGPClfC g + kL N +CG Ce+ + + G G C C Rabbit4Lib 18 GVKTTKYRNPSLKL---MVN--VCGHTLCEscvdllfVRGAGNCPEC 59 GalVltkeeqeiLlre<-* G++ ++ + +L ++ Rabbit4Lib 60 GTPLRKSNFRVQLFED 75 E-MAP-115: domain 1 of 1, from 53 to 205: score -100.0, E = 4.6 *->APgkaensaAlsKptAGTTDaeEAtrLLAEKRRqAReQrEkEEqERr A+ +e l K e t +E E + + Rabbit4Lib 53 AGNCPECGTPLRKSNFRVQLFEDPT-----------VDKEVEIRKKV 88 eqeErdrrk.....RE..ElkrraaEeRtlrrEeEARrrEeeraRekeek ++ r ++ ++ RE + + ++E + ++ ek +k Rabbit4Lib 89 LKIYNKREEdfpslREynDFLEEVEEIV-FNLTNNVDLDNTKKKMEKYQK 137 KKqEGEEKRKAGEElkRkAEEeLLLKekrEqEeqErAmiqkQKEeAEara ++ K K LK rEqEe E +++ e Rabbit4Lib 138 ENKDVIQKNK--------------LKLTREQEELEE-VLEV---E----- 164 REeAErvRlEREkhfqqeEQERlERkKRLeEIMKRTRksevsekVKkeDs R e E+ Rl q+eEQ L I KR k + +D Rabbit4Lib 165 RQENEQRRL----FIQKEEQ--------LQQILKRKNKQAFLDELESSDL 202 keG<-* + Rabbit4Lib 203 PVA 205 // Query: Rabbit4Lib.1132.C1 293 1 289 nseq=2; minus strand; translated Scores for sequence family classification (score includes all domains): Model Description Score E-value N -------- ----------- ----- ------- --- ATP-gua_Ptrans ATP:guanido phosphotransferase, C-term -63.1 3.1e-07 1 Parsed for domains: Model Domain seq-f seq-t hmm-f hmm-t score E-value -------- ------- ----- ----- ----- ----- ----- ------- ATP-gua_Ptrans 1/1 1 93 [. 1 275 [] -63.1 3.1e-07 Alignments of top-scoring domains: ATP-gua_Ptrans: domain 1 of 1, from 1 to 93: score -63.1, E = 3.1e-07 *->dlkggdnlDpnteGnyVlStRVRtGRSieGyslpPhltreeRrevEn + Rabbit4Lib 1 --XHA----S------------------------------------- 4 kvvtALsgLeGelkGkYYpLtgmteeeqQqLiDDHFLFdkpVsplLtaAg Rabbit4Lib - -------------------------------------------------- - marDWPdgRGIwhNdnKtFLVWiNEEDHlRVISMqkGGnlkaVfkRlcsg Rabbit4Lib - -------------------------------------------------- - lqeiEkliKkkgkeFmwNdrLGyvltCPSNLGTgLRAgVHvKLPkLaknr AgVH+KLP L+k + Rabbit4Lib 5 ------------------------------------AGVHIKLPLLSK-D 17 pkFeeileklrLQkRGTgGvdTaavggvyDiSNkdRLGlsEveaVqevvD +F++ile+lrLQkRGTgGvdTaa+g v+DiSN+dRLG sEve+Vq+v+D Rabbit4Lib 18 SRFPKILENLRLQKRGTGGVDTAATGSVFDISNLDRLGKSEVELVQLVID 67 GVklLvemEkkLekgqdGaiedvlPaqk<-* GV++L+++E++Le+gqd i + P+ Rabbit4Lib 68 GVNYLIDCERRLERGQD--IRIPAPLVH 93 // Query: Rabbit4Lib.1132.C2 397 1 412 nseq=4; minus strand; translated Scores for sequence family classification (score includes all domains): Model Description Score E-value N -------- ----------- ----- ------- --- ATP-gua_Ptrans ATP:guanido phosphotransferase, C-term 103.0 5.9e-27 1 Parsed for domains: Model Domain seq-f seq-t hmm-f hmm-t score E-value -------- ------- ----- ----- ----- ----- ----- ------- ATP-gua_Ptrans 1/1 1 134 [. 1 275 [] 103.0 5.9e-27 Alignments of top-scoring domains: ATP-gua_Ptrans: domain 1 of 1, from 1 to 134: score 103.0, E = 5.9e-27 *->dlkggdnlDpnteGnyVlStRVRtGRSieGyslpPhltreeRrevEn Rabbit4Lib 1 ---------X------------------------------------- 1 kvvtALsgLeGelkGkYYpLtgmteeeqQqLiDDHFLFdkpVsplLtaAg a+g Rabbit4Lib 2 ----------------------------------------------HASG 5 marDWPdgRGIwhNdnKtFLVWiNEEDHlRVISMqkGGnlkaVfkRlcsg +c+g Rabbit4Lib 6 ----------------------------------------------FCRG 9 lqeiEkliKkkgkeFmwNdrLGyvltCPSNLGTgLRAgVHvKLPkLaknr l+e+E+li ++g+eFmwN+rLGy+ltCPSNLGTgLRAgVH+KLP L+k + Rabbit4Lib 10 LKEVERLIQERGWEFMWNERLGYILTCPSNLGTGLRAGVHIKLPLLSK-D 58 pkFeeileklrLQkRGTgGvdTaavggvyDiSNkdRLGlsEveaVqevvD +F++ile+lrLQkRGTgGvdTaa+g v+DiSN+dRLG sEve+Vq+v+D Rabbit4Lib 59 SRFPKILENLRLQKRGTGGVDTAATGSVFDISNLDRLGKSEVELVQLVID 108 GVklLvemEkkLekgqdGaiedvlPaqk<-* GV++L+++E++Le+gqd i + P+ Rabbit4Lib 109 GVNYLIDCERRLERGQD--IRIPAPLVH 134 // Query: Rabbit4Lib.1136.C1 115 1 71 nseq=2; translated Scores for sequence family classification (score includes all domains): Model Description Score E-value N -------- ----------- ----- ------- --- [no hits above thresholds] Parsed for domains: Model Domain seq-f seq-t hmm-f hmm-t score E-value -------- ------- ----- ----- ----- ----- ----- ------- [no hits above thresholds] Alignments of top-scoring domains: [no hits above thresholds] // Query: Rabbit4Lib.1137.C1 604 119 382 nseq=3; minus strand; translated Scores for sequence family classification (score includes all domains): Model Description Score E-value N -------- ----------- ----- ------- --- PDE6_gamma Retinal cGMP phosphodiesterase, gamma subu 234.2 1.8e-66 1 Parsed for domains: Model Domain seq-f seq-t hmm-f hmm-t score E-value -------- ------- ----- ----- ----- ----- ----- ------- PDE6_gamma 1/1 5 87 .] 1 83 [] 234.2 1.8e-66 Alignments of top-scoring domains: PDE6_gamma: domain 1 of 1, from 5 to 87: score 234.2, E = 1.8e-66 *->msdaetlsAtavaqGPvtPRKGPPKFKqRqtRqFKsKPPKKGvkGFG +++ae++sAt+v +GPvtPRKGPPKFKqRqtRqFKsKPPKKGv+GFG Rabbit4Lib 5 PPKAEIRSATRVIGGPVTPRKGPPKFKQRQTRQFKSKPPKKGVQGFG 51 DDiPGmEGLGtDitviCPWEAFsHLELHELAqyGii<-* DDiPGmEGLGtDitviCPWEAF+HLELHELAqyGii Rabbit4Lib 52 DDIPGMEGLGTDITVICPWEAFNHLELHELAQYGII 87 // Query: Rabbit4Lib.1138.C1 2068 1 1270 nseq=2; minus strand; translated Scores for sequence family classification (score includes all domains): Model Description Score E-value N -------- ----------- ----- ------- --- RRM_1 RNA recognition motif. (a.k.a. RRM, RBD, or 80.6 3.1e-20 1 Parsed for domains: Model Domain seq-f seq-t hmm-f hmm-t score E-value -------- ------- ----- ----- ----- ----- ----- ------- RRM_1 1/1 16 87 .. 1 74 [] 80.6 3.1e-20 Alignments of top-scoring domains: RRM_1: domain 1 of 1, from 16 to 87: score 80.6, E = 3.1e-20 *->lfVgNLppdtteedLkdlFskfGpiesikivrDttretgrskGfaFV ++V ++d++++d+k F+ fG+i+s+ + rD + tg++kG++F+ Rabbit4Lib 16 IYVASVHQDLSDDDIKSVFEAFGKIKSCTLARD--PTTGKHKGYGFI 60 eFedeedAekAldalnGkelggrelrv<-* e+e+ + ++A++++n + lgg lrv Rabbit4Lib 61 EYEKAQSSQDAVSSMNLFDLGGQYLRV 87 // Query: Rabbit4Lib.1138.C2 2001 38 851 nseq=2; translated Scores for sequence family classification (score includes all domains): Model Description Score E-value N -------- ----------- ----- ------- --- RRM_1 RNA recognition motif. (a.k.a. RRM, RBD, or 125.8 8e-34 2 Parsed for domains: Model Domain seq-f seq-t hmm-f hmm-t score E-value -------- ------- ----- ----- ----- ----- ----- ------- RRM_1 1/2 109 180 .. 1 74 [] 91.6 1.6e-23 RRM_1 2/2 206 271 .. 1 74 [] 34.2 2.9e-06 Alignments of top-scoring domains: RRM_1: domain 1 of 2, from 109 to 180: score 91.6, E = 1.6e-23 *->lfVgNLppdtteedLkdlFskfGpiesikivrDttretgrskGfaFV ++Vg + +++ e+ ++++F++fGpi+si+++ D + t ++kGfaFV Rabbit4Lib 109 VYVGSIYYELGEDTIRQAFAPFGPIKSIDMSWD--SVTMKHKGFAFV 153 eFedeedAekAldalnGkelggrelrv<-* e+e +e+A+ Al+++n +lggr+++v Rabbit4Lib 154 EYEVPEAAQLALEQMNSVMLGGRNIKV 180 RRM_1: domain 2 of 2, from 206 to 271: score 34.2, E = 2.9e-06 *->lfVgNLppdtteedLkdlFskfGpiesikivrDttretgrskGfaFV ++V ++d++++d+k F+ fG+i+s+ + rD + tg++kG++F Rabbit4Lib 206 IYVASVHQDLSDDDIKSVFEAFGKIKSCTLARD--PTTGQHKGYGFF 250 eFedeedAekAldalnGkelggrelrv<-* e+ + ++A++++n + lg Rabbit4Lib 251 DXEKAQSSQDAVSSMNLFDLG------ 271 // Query: Rabbit4Lib.1143.C1 313 1 243 nseq=3; minus strand; translated Scores for sequence family classification (score includes all domains): Model Description Score E-value N -------- ----------- ----- ------- --- [no hits above thresholds] Parsed for domains: Model Domain seq-f seq-t hmm-f hmm-t score E-value -------- ------- ----- ----- ----- ----- ----- ------- [no hits above thresholds] Alignments of top-scoring domains: [no hits above thresholds] // Query: Rabbit4Lib.1143.C2 385 407 892 nseq=7; translated Scores for sequence family classification (score includes all domains): Model Description Score E-value N -------- ----------- ----- ------- --- [no hits above thresholds] Parsed for domains: Model Domain seq-f seq-t hmm-f hmm-t score E-value -------- ------- ----- ----- ----- ----- ----- ------- [no hits above thresholds] Alignments of top-scoring domains: [no hits above thresholds] // Query: Rabbit4Lib.1143.C3 1183 123 857 nseq=5; minus strand; translated Scores for sequence family classification (score includes all domains): Model Description Score E-value N -------- ----------- ----- ------- --- 14-3-3 14-3-3 protein 507.0 1.4e-148 1 RICH RICH domain -11.0 8.4 1 Uso1_p115_C Uso1 / p115 like vesicle tethering protei -25.7 6.1 1 BAR BAR domain -75.1 8.3 1 Parsed for domains: Model Domain seq-f seq-t hmm-f hmm-t score E-value -------- ------- ----- ----- ----- ----- ----- ------- Uso1_p115_C 1/1 10 146 .. 1 151 [] -25.7 6.1 RICH 1/1 76 158 .. 1 85 [] -11.0 8.4 BAR 1/1 1 194 [. 1 264 [] -75.1 8.3 14-3-3 1/1 3 236 .. 1 236 [] 507.0 1.4e-148 Alignments of top-scoring domains: Uso1_p115_C: domain 1 of 1, from 10 to 146: score -25.7, E = 6.1 *->akievEaeseqnlaAkaleletrllsdaynsLeQknkalenEaeeav ak+++ ae + +aA+ + + t + +L +++ l Rabbit4Lib 10 AKLAEQAERYDDMAAA-MKAVTEQ----GHELSNEERNLLSV----A 47 vkaLkearlarkkeleksksttkdleaikekLdeEKqsADAAqDalkesq k + +ar + ++ + t + k++ +E + +e q Rabbit4Lib 48 YKNVVGARRSSWRVISSIEQKTER-NEKKQQMGKE-----YREKIEAELQ 91 kEqdDLLvLL........aDqeeKvtkykekLkdLGveVSeddkllegig + +D L+LL++ ++ ++ e+Kv +k k+ d Se++ Rabbit4Lib 92 DICNDVLELLdkylipnaTQPESKVFYLKMKG-DYFRYLSEVA------S 134 ddeededeDeee<-* +d + + Rabbit4Lib 135 GDNKQTTVSNSQ 146 RICH: domain 1 of 1, from 76 to 158: score -11.0, E = 8.4 *->dderkKakdeVeeYleKiLseIkkqLdKrkHtqnVaLikKLsaIKtk ++ k ++ +e l+ i +++ LdK + K +K k Rabbit4Lib 76 QQMGKEYREKIEAELQDICNDVLELLDKYLIPNATQPESKVFYLKMK 122 ..YLyeLdvlkskseKsaelqelvsktkaeLDaAFekFKK<-* ++Y++ L+++ s q++vs ++ +AFe KK Rabbit4Lib 123 gdYFRYLSEVASG----DNKQTTVSNSQQAYQEAFEISKK 158 BAR: domain 1 of 1, from 1 to 194: score -75.1, E = 8.3 *->lkKqAGgffnRasqllkeKvGkaekTkvLDedFeelerrfdtteklv + K l +K ae+ + ++++++ ++++ + + Rabbit4Lib 1 MDKS----------ELVQKAKLAEQAE----RYDDMAAAMKAVTEQG 33 kklvketklYlqpnpaarakqkvleklskrrgqvkrkgypqPetlLaetm ++l +e + l+ +a+ + + + Rabbit4Lib 34 HELSNEERNLLS---VAYKNVV----------------------GARRSS 58 qeigeelgddsedPfGkaLekygeamkqlaqlleqldervkqnfldPltn + + + +++e +ek ++ k+ ++ e + +++++l+ l + Rabbit4Lib 59 WRVISSIEQKTE-----RNEKKQQMGKEYREKIEAELQDICNDVLELLDK 103 llekefkeiqkhikKlerKrLDyDakrtrlkkaktkkskkakDekklakA +l + + ++ l+ K Dy ++ + +++ + k Rabbit4Lib 104 YLIPNATQPESKVFYLKMKG-DYFRYLSEVAS-G---DNK---------- 138 dqleeElrqAqqkfEelneeLkeeLpnlleleveflvnqlqafveaqldf + ++ + qq+++e e+ k e++ + + + +f+ +f Rabbit4Lib 139 ---QTTVSNSQQAYQEAFEISKKEMQPTHPIRLGLA----LNFS----VF 177 hrqsaqlleqlqqqLdk<-* ++++++ e++ + + Rabbit4Lib 178 YYEILNSPEKACSLAKT 194 14-3-3: domain 1 of 1, from 3 to 236: score 507.0, E = 1.4e-148 *->reelvylakLaeqaEryeemveamkkvaelgeeLsvEeRnLlsvaYK + elv++akLaeqaEry++m++amk+v+e+g+eLs+EeRnLlsvaYK Rabbit4Lib 3 KSELVQKAKLAEQAERYDDMAAAMKAVTEQGHELSNEERNLLSVAYK 49 nvvGarRasWRiissiEqKeeskgnekkvelikeYRekvEkeLskicddv nvvGarR+sWR+issiEqK+e nekk+++ keYRek+E+eL++ic+dv Rabbit4Lib 50 NVVGARRSSWRVISSIEQKTER--NEKKQQMGKEYREKIEAELQDICNDV 97 LklldkhLipkattaeskvFylKmkGDYyRYlaEfatgeerkeaadksle L+lldk+Lip+at++eskvFylKmkGDY+RYl+E+a+g+++++++ +s++ Rabbit4Lib 98 LELLDKYLIPNATQPESKVFYLKMKGDYFRYLSEVASGDNKQTTVSNSQQ 147 aYkeAsdiakaelaPthPiRLGLALnFsvFyyeilnspdkAcqLAKqaFd aY+eA++i+k+e++PthPiRLGLALnFsvFyyeilnsp+kAc+LAK+aFd Rabbit4Lib 148 AYQEAFEISKKEMQPTHPIRLGLALNFSVFYYEILNSPEKACSLAKTAFD 197 eAiaeLdtlsEesYKdstLimqLLRDnLtLWtsdaqdee<-* eAiaeLdtl+EesYKdstLimqLLRDnLtLWts++q++e Rabbit4Lib 198 EAIAELDTLNEESYKDSTLIMQLLRDNLTLWTSENQGDE 236 // Query: Rabbit4Lib.1145.C2 515 43 453 nseq=3; minus strand; translated Scores for sequence family classification (score includes all domains): Model Description Score E-value N -------- ----------- ----- ------- --- MAP1_LC3 Microtubule associated protein 1A/1B, light 257.5 1.7e-73 1 APG12 Ubiquitin-like autophagy protein Apg12 -14.8 0.022 1 Parsed for domains: Model Domain seq-f seq-t hmm-f hmm-t score E-value -------- ------- ----- ----- ----- ----- ----- ------- APG12 1/1 29 135 .. 1 107 [] -14.8 0.022 MAP1_LC3 1/1 32 135 .. 1 106 [] 257.5 1.7e-73 Alignments of top-scoring domains: APG12: domain 1 of 1, from 29 to 135: score -14.8, E = 0.022 *->asTerpkSdkkeKNiqK.......vqirLkAiGdaPiLKkkkfkVnp + +r k+ k i K+ +++ +v + + +++P L k+k V Rabbit4Lib 29 PFEYRKKEGEK---IRKkypdrvpVIVEKAPKARVPDLDKRKYLVPS 72 sqtfakvilFLkKfLkLqAsdsLflYvNnsFAPSPDqivgnLYe.cFgtd t++ + ++K+ +L d Lf vNn+ P + g LYe+++ d Rabbit4Lib 73 DLTVGQFYFLIRKRIHLRPEDALFFFVNNTIPPT-SATMGQLYEdNHEED 121 gkDKEiLvlnYCisvAwG<-* L + Y+ +G Rabbit4Lib 122 YF----LYVAYSDESVYG 135 MAP1_LC3: domain 1 of 1, from 32 to 135: score 257.5, E = 1.7e-73 *->kRraEserIReKYPDRIPVIvEKaeksdslPdiDKkKYLVPaDlTVG R++E+e+IR KYPDR+PVIvEKa+k++ +Pd+DK+KYLVP+DlTVG Rabbit4Lib 32 YRKKEGEKIRKKYPDRVPVIVEKAPKAR-VPDLDKRKYLVPSDLTVG 77 qFvyiIRKRiqLspekAiFlFVnnrtlPptsatMsaLYeeekDeDgFLYm qF+++IRKRi L+pe+A+F+FVnn t+PptsatM++LYe++++eD+FLY+ Rabbit4Lib 78 QFYFLIRKRIHLRPEDALFFFVNN-TIPPTSATMGQLYEDNHEEDYFLYV 126 vYSgentFG<-* +YS+e+++G Rabbit4Lib 127 AYSDESVYG 135 // Query: Rabbit4Lib.1148.C1 205 177 617 nseq=7; minus strand; translated Scores for sequence family classification (score includes all domains): Model Description Score E-value N -------- ----------- ----- ------- --- [no hits above thresholds] Parsed for domains: Model Domain seq-f seq-t hmm-f hmm-t score E-value -------- ------- ----- ----- ----- ----- ----- ------- [no hits above thresholds] Alignments of top-scoring domains: [no hits above thresholds] // Query: Rabbit4Lib.1150.C1 578 1 702 nseq=2; minus strand; translated Scores for sequence family classification (score includes all domains): Model Description Score E-value N -------- ----------- ----- ------- --- [no hits above thresholds] Parsed for domains: Model Domain seq-f seq-t hmm-f hmm-t score E-value -------- ------- ----- ----- ----- ----- ----- ------- [no hits above thresholds] Alignments of top-scoring domains: [no hits above thresholds] // Query: Rabbit4Lib.1151.C2 697 1 1017 nseq=2; minus strand; translated Scores for sequence family classification (score includes all domains): Model Description Score E-value N -------- ----------- ----- ------- --- Peptidase_C1 Papain family cysteine protease 218.0 1.4e-61 1 Propeptide_C1 Peptidase family C1 propeptide 45.2 1.5e-09 1 Parsed for domains: Model Domain seq-f seq-t hmm-f hmm-t score E-value -------- ------- ----- ----- ----- ----- ----- ------- Propeptide_C1 1/1 25 65 .. 1 44 [] 45.2 1.5e-09 Peptidase_C1 1/1 79 328 .. 1 285 [] 218.0 1.4e-61 Alignments of top-scoring domains: Propeptide_C1: domain 1 of 1, from 25 to 65: score 45.2, E = 1.5e-09 *->LSdEfInyINekpntTWKAGrNfreftslsyqiKrLlGVlpdgp<-* LSdE++n+IN+ AG+Nf ++ +sy +K+L+G++++gp Rabbit4Lib 25 LSDELVNFINKX-EHDVEAGHNFF-NVEVSY-LKKLCGTFLGGP 65 Peptidase_C1: domain 1 of 1, from 79 to 328: score 218.0, E = 1.4e-61 *->lPesfDWRekWkggasVtpVKdQG........qCGSCWAFSavgalE lPesf +g +V +K +++ + F+av+a++ Rabbit4Lib 79 LPESFTRGN--SG-RTVXTIKEXQrpgvlrllL-----GFGAVEAIS 117 grncIktggawggklvsLSEQqLVDCdtedygnnsCGyGCnGGGlmdnAf +r+cI+t+ g+ +v S+ +++ C+++ +CG+GCnG G+++ A+ Rabbit4Lib 118 DRICIHTN---GHVNVEVSAEDMLTCCGG-----QCGDGCNG-GYPSGAW 158 eYikknqIsnNgGivtEsdY....gCkPYtdi.PCgkdgendtyy.pCpg ++++k +G+v+++ Y+++ kPY+ i+PC+++ + +++C+g Rabbit4Lib 159 NFWTK------KGLVSGGLYdshvAAKPYS-IpPCEHH--VNGSRpACTG 199 eaydkqTgtCkfkCkknskypktyakikgygd..vpynvgtkdEealqaa e+ T + + + + +++y ++k+ + ++++ +dE++++a+ Rabbit4Lib 200 EGD---TXQVQQDLRAR--LQPSYKEDKHXWIqfLQRS---SDENEIKAE 241 vatnGPVsVAidAserSeyDFqlYksGlGVYtgt.geCsgepateLdHaV +++nGPV+ A+++++ DF +YksG VY++t+g+ g +Ha+ Rabbit4Lib 242 IYKNGPVEGAFTVYS----DFLMYKSG--VYQHTtGDIMG------GHAI 279 liVGYGtendGtdYWIvKNSWGtdWGEnGYfRiaRgknksssneCGIase +i G+G en G++YW+v+NSW+tdWG++G+f+i +++ + +se Rabbit4Lib 280 RILGWGEEN-GVPYWLVANSWNTDWGDKGFFKILKDRI-----TVESESE 323 asypi<-* +++i Rabbit4Lib 324 IVAGI 328 // Query: Rabbit4Lib.1151.C3 969 1 785 nseq=2; minus strand; translated Scores for sequence family classification (score includes all domains): Model Description Score E-value N -------- ----------- ----- ------- --- Peptidase_C1 Papain family cysteine protease 259.5 4.5e-74 1 Parsed for domains: Model Domain seq-f seq-t hmm-f hmm-t score E-value -------- ------- ----- ----- ----- ----- ----- ------- Peptidase_C1 1/1 12 251 .. 1 285 [] 259.5 4.5e-74 Alignments of top-scoring domains: Peptidase_C1: domain 1 of 1, from 12 to 251: score 259.5, E = 4.5e-74 *->lPesfDWRekWkggasVtpVKdQG.....qCGSCWAFSavgalEgrn W e + + +++dQ + F+av+a+++r+ Rabbit4Lib 12 ------WAE--LS-N-IKEIRDQXvlrllL-----GFGAVEAISDRI 43 cIktggawggklvsLSEQqLVDCdtedygnnsCGyGCnGGGlmdnAfeYi cI+t+ g+ +v S+ +++ C+++ +CG+GCnG G+++ A++++ Rabbit4Lib 44 CIHTN---GHVNVEVSAEDMLTCCGG-----QCGDGCNG-GYPSGAWNFW 84 kknqIsnNgGivtEsdY....gCkPYtdi.PCgkdgendtyy.pCpgeay +k +G+v+++ Y+++ gCkPY+ i+PC+++ + +++C+ge+ Rabbit4Lib 85 TK------KGLVSGGLYdshvGCKPYS-IpPCEHH--VNGSRpACTGEGD 125 dkqTgtCkfkCkknskypktyakikgygdvpyn.vgtkdEealqaavatn T++C ++C+ + y ++y ++k+yg+ +y+ + dE++++a++++n Rabbit4Lib 126 ---TPRCSKTCEPG--YSPSYKEDKHYGYSSYSvSS--DENEIKAEIYKN 168 GPVsVAidAserSeyDFqlYksGlGVYtgt.geCsgepateLdHaVliVG GPV+ A+++++ DF +YksG VY++t+g+ g +Ha++i G Rabbit4Lib 169 GPVEGAFTVYS----DFLMYKSG--VYQHTtGDIMG------GHAIRILG 206 YGtendGtdYWIvKNSWGtdWGEnGYfRiaRgknksssneCGIaseasyp +G en G++YW+v+NSW+tdWG++G+f+i +++ + + e +++ Rabbit4Lib 207 WGEEN-GVPYWLVANSWNTDWGDKGFFKILKDRI-----TVESNPEIVAG 250 i<-* i Rabbit4Lib 251 I 251 // Query: Rabbit4Lib.1153.C1 2025 1 831 nseq=3; minus strand; translated Scores for sequence family classification (score includes all domains): Model Description Score E-value N -------- ----------- ----- ------- --- Gaa1 Gaa1-like, GPI transamidase component 158.5 1.1e-43 1 Parsed for domains: Model Domain seq-f seq-t hmm-f hmm-t score E-value -------- ------- ----- ----- ----- ----- ----- ------- Gaa1 1/1 1 276 [] 1 537 [] 158.5 1.1e-43 Alignments of top-scoring domains: Gaa1: domain 1 of 1, from 1 to 276: score 158.5, E = 1.1e-43 *->sGeNlYGiLRAPRgdsTEslVLaVPwkdsdsvetNisagVaLllsLA s Rabbit4Lib 1 ------------------------------S---------------- 1 kfFrrwsyWsKDIIfvitEdpllGlesWLEAYHDGDREldvskislsPGn D Rabbit4Lib 2 ---------------------------------D---------------- 2 LklRaGSIQAAlaLElsstEvdsevleVsyeGLNGqLPNLDLfNlvqrIt Rabbit4Lib - -------------------------------------------------- - ekeGllskyklklqpkDfhsnsgfsqrSRLksLllgllsQAssrvtgaHG Rabbit4Lib - -------------------------------------------------- - NELFsrYRIdaLTLAAnRRaikakdkfsfDlvavGLLkAiEgmFRSLNNL +L Rabbit4Lib 3 ------------------------------------------------HL 4 LErlHQSFFFYlllalsrFvSIGsYMPsvvaLvaafaLkAleaWinlhea LErlHQSFFFYll+alsrFvSIG+YMP++++L+++++LkAle+W+ lhea Rabbit4Lib 5 LERLHQSFFFYLLPALSRFVSIGLYMPAAGFLLLVLGLKALELWMRLHEA 54 nidLekpygWLRlvalevwLvslviSdkvelaFlsivaylLvssiiglsc +++ ++ g ++++ ++ ++v+l s+va+lL+s+++gl++ Rabbit4Lib 55 GAGPDEARG---VPGPSLAAPP---VQGVGL--TSLVAPLLISQAMGLAL 96 fvllvLsqkfleiefssaelkevvlllLSlvsigLvLpnntfvVVstqlP +vl+vL+q+++ ++f++ae+++vvl+lL+++++gL+Lp+nt++VVstq+P Rabbit4Lib 97 YVLPVLGQHVAAQHFPVAEAEAVVLTLLAIYAAGLALPHNTHRVVSTQAP 146 drGfallkLvaLlafalalvviallNFSLgfvvAvllVPLvialeaKeen drG+++lkLvaL ++al+l++ial+NFSLgf++A ++VP a++a +++ Rabbit4Lib 147 DRGWMALKLVALVYLALQLGCIALTNFSLGFLLAATMVP--AAALAEPHG 194 eRvelrltlllAtLvlqsqavvllvlLilTflelpevPfsKLlakeeelf +R l++A+Lvl+s+a++ll++L+l ++el+evP+s la++++lf Rabbit4Lib 195 PR-----PLYAALLVLTSPAATLLGSLFL-WRELQEVPLS--LAEGWQLF 236 ldalakgVleilvlgewlffVlsigflPlWlliwalsfeK<-* l+ala+gVle+ +g++lf++l +g++P+Wll+w+++f+K Rabbit4Lib 237 LAALAQGVLEHYSYGALLFPLLALGLYPCWLLFWNVLFWK 276 // Query: Rabbit4Lib.1154.C1 405 54 663 nseq=2; translated Scores for sequence family classification (score includes all domains): Model Description Score E-value N -------- ----------- ----- ------- --- [no hits above thresholds] Parsed for domains: Model Domain seq-f seq-t hmm-f hmm-t score E-value -------- ------- ----- ----- ----- ----- ----- ------- [no hits above thresholds] Alignments of top-scoring domains: [no hits above thresholds] // Query: Rabbit4Lib.1155.C1 204 1 173 nseq=2; translated Scores for sequence family classification (score includes all domains): Model Description Score E-value N -------- ----------- ----- ------- --- [no hits above thresholds] Parsed for domains: Model Domain seq-f seq-t hmm-f hmm-t score E-value -------- ------- ----- ----- ----- ----- ----- ------- [no hits above thresholds] Alignments of top-scoring domains: [no hits above thresholds] // Query: Rabbit4Lib.1158.C1 425 1 326 nseq=2; minus strand; translated Scores for sequence family classification (score includes all domains): Model Description Score E-value N -------- ----------- ----- ------- --- [no hits above thresholds] Parsed for domains: Model Domain seq-f seq-t hmm-f hmm-t score E-value -------- ------- ----- ----- ----- ----- ----- ------- [no hits above thresholds] Alignments of top-scoring domains: [no hits above thresholds] // Query: Rabbit4Lib.1159.C1 499 1 654 nseq=3; minus strand; translated Scores for sequence family classification (score includes all domains): Model Description Score E-value N -------- ----------- ----- ------- --- FA_desaturase Fatty acid desaturase 87.3 3.1e-22 1 DUF478 Protein of unknown function (DUF478) 0.8 6.8 1 Parsed for domains: Model Domain seq-f seq-t hmm-f hmm-t score E-value -------- ------- ----- ----- ----- ----- ----- ------- DUF478 1/1 29 96 .. 1 68 [] 0.8 6.8 FA_desaturase 1/1 2 178 .. 1 295 [] 87.3 3.1e-22 Alignments of top-scoring domains: DUF478: domain 1 of 1, from 29 to 96: score 0.8, E = 6.8 *->mGvqkstYtnPvLFWGvFEvRGtsKGvGviLtRFFwvfsgrervlkr +G P F G F K + viL F+ f k Rabbit4Lib 29 LGADGIDVDIPTDFEGWFFCTTLRKLIWVILQPLFYAFRPLFINPKP 75 ssylvilnllllvGFleasdy<-* syl+i+n + F y Rabbit4Lib 76 ISYLEIINTVVQITFDILIYY 96 FA_desaturase: domain 1 of 1, from 2 to 178: score 87.3, E = 3.1e-22 *->awlaggtaltglfvtsGLGITaggHdLcsHrsfsknsylndlvGril + r++ Rabbit4Lib 2 -------------------------R-----------------VRFA 6 lalplgvpfqgsiieWrrsHrtHHrytntdekDPdiaprgffavswpksh + lp+gvp++ s ++r+H+ HHry + d+ D di++ ++ + Rabbit4Lib 7 N-LPIGVPYSIS---FKRYHMDHHRYLGADGIDVDIPTDFEGW------- 45 svhyekkvllfshvgwllvrklplyflliyplrlakgvpGKYdrkkldsh ++ + +++l++ +l+ ++ Rabbit4Lib 46 --------FFCTTLRKLIWVILQP------------------------LF 63 dlprsplfrfqaaeryyvllsllglfalptllplllwglgglwgvlkfyl + +r+ +++++ + y+ ++++++++ + +l++++wg+++l ++l++ l Rabbit4Lib 64 YAFRPLFINPK--PISYLEIINTVVQITFDILIYYFWGIKSLVYMLAATL 111 vpylvvgfwlglvnsylaHtggerklPppfappeYdgensiewdwdrgql + l++++ g+++ ++++ + Rabbit4Lib 112 LG-LGLHPISGHFIA-DHYMFLKG-------Y------------------ 134 sttvdrdygkllnllfhgegNyHveHHlFPtiPhynlpkatpaikptl<- +++++yg +lnll++++g yH+eHH+FP+iP +nlp++++++ +++ Rabbit4Lib 135 --ETYSYYG-PLNLLTFNVG-YHNEHHDFPNIPGKNLPLVRKIAAEYY 178 * Rabbit4Lib - - // Query: Rabbit4Lib.1160.C1 1459 1 1011 nseq=2; minus strand; translated Scores for sequence family classification (score includes all domains): Model Description Score E-value N -------- ----------- ----- ------- --- HEAT HEAT repeat 24.0 0.0036 2 UME UME (NUC010) domain -25.6 2.2 1 Parsed for domains: Model Domain seq-f seq-t hmm-f hmm-t score E-value -------- ------- ----- ----- ----- ----- ----- ------- HEAT 1/2 32 68 .. 1 36 [] 1.4 1.6e+02 UME 1/1 166 264 .. 1 113 [] -25.6 2.2 HEAT 2/2 249 285 .. 1 36 [] 22.8 0.0084 Alignments of top-scoring domains: HEAT: domain 1 of 2, from 32 to 68: score 1.4, E = 1.6e+02 *->e.lldellplllkllnDpdpeVReaAaeaLgalaevl<-* +l + + +ll +++ p aAa++++ l++++ Rabbit4Lib 32 PqLNQLMRELLELSCCHGCPFSSTAAAKCFAGLLNKH 68 UME: domain 1 of 1, from 166 to 264: score -25.6, E = 2.2 *->fanfLqehiLGIlqvFssdlhdidgkteifeKkraLngIgfLiklag + f+ +++ ++q F s+ d++ + ++K g++ + ++ Rabbit4Lib 166 -QRFFTDNVPALVQGFHSAPQDVK---PNYLK-----GLSHVLNRLP 203 gkhissalpqisacLqtaleipedaLqenalrcWhvLvrkLADvneeeLg + ++ + lp ++++L al + +q +l c+ L+ +++ Rabbit4Lib 204 KPVLLPELPTLLSLLLEALSCSDCVVQLSTLSCLQPLLLEA-----PQVM 248 slldqiiaillplwet<-* sl +++++ + ++ Rabbit4Lib 249 SLHVDTLVTKFLNLSS 264 HEAT: domain 2 of 2, from 249 to 285: score 22.8, E = 0.0084 *->e.lldellplllkllnDpdpeVReaAaeaLgalaevl<-* + ++d+l+ +l+l ++p+ VR aA++++ al + Rabbit4Lib 249 SlHVDTLVTKFLNLSSSPSMAVRIAALQCMHALTRLP 285 // Query: Rabbit4Lib.1162.C1 1030 1 591 nseq=4; minus strand; translated Scores for sequence family classification (score includes all domains): Model Description Score E-value N -------- ----------- ----- ------- --- efhand EF hand 15.5 1.3 2 MaoC_dehydratas MaoC like domain -32.1 5.9 1 Parsed for domains: Model Domain seq-f seq-t hmm-f hmm-t score E-value -------- ------- ----- ----- ----- ----- ----- ------- efhand 1/2 92 120 .. 1 29 [] 1.8 77 efhand 2/2 128 156 .. 1 29 [] 13.7 4 MaoC_dehydratas 1/1 68 168 .. 1 135 [] -32.1 5.9 Alignments of top-scoring domains: efhand: domain 1 of 2, from 92 to 120: score 1.8, E = 77 *->elkeaFkefDkDgDGkIsfeEfkaalkkl<-* e+++ F++fD+ ++G + e +l ++ Rabbit4Lib 92 EFRASFNHFDRKRNGMMEPEISAXCLISM 120 efhand: domain 2 of 2, from 128 to 156: score 13.7, E = 4 *->elkeaFkefDkDgDGkIsfeEfkaalkkl<-* e+ +++ ++D + G ++f+ f++++++ Rabbit4Lib 128 EFARIMTMVDPNAAGVVTFQAFMDFMTRE 156 MaoC_dehydratas: domain 1 of 1, from 68 to 168: score -32.1, E = 5.9 *->dfasaigeppdfekpvtvtLfkAeadialFAlvSGDhNPIHvDpeaf +++++++ +++++ + ++ +++ + F++ S+ H+D+ Rabbit4Lib 68 RTINEVENQVLTRDAKGLS----QEQLNEFRA-SFN----HFDRK-- 103 AklagFggpIaHGmltlaivaglveeqggdngveetvvaryggwsvrFtg Gm+ i+a ++++g d g + +r + Rabbit4Lib 104 ----------RNGMMEPEISAXCLISMGYDLG---------EVEFARIMT 134 PVfpGdtlrvevevvgvkrdgkletktvettvgvtvga<-* +V p++ +v+++ + ++ ++ t et + ++v+a Rabbit4Lib 135 MVDPNAAGVVTFQAF--MDFMT-RE-TAETDTAEQVVA 168 // Query: Rabbit4Lib.1163.C1 1362 1 681 nseq=2; translated Scores for sequence family classification (score includes all domains): Model Description Score E-value N -------- ----------- ----- ------- --- TraB TraB family -45.5 2e-05 1 Parsed for domains: Model Domain seq-f seq-t hmm-f hmm-t score E-value -------- ------- ----- ----- ----- ----- ----- ------- TraB 1/1 1 167 [. 1 236 [] -45.5 2e-05 Alignments of top-scoring domains: TraB: domain 1 of 1, from 1 to 167: score -45.5, E = 2e-05 *->vkekeiylvGTAHVSkeSvEeVrniIerekPDaVAVELDdaRYhsLl +++ Rabbit4Lib 1 XRSRT------------------------------------------ 5 ngneneqwselDiakvlKeGklfvLisnliLsafQKkLgketGvkPGsEm g + G ++ +++G PG+E+ Rabbit4Lib 6 -G---------------RVG---------------AHITEQLGMAPGGEF 24 kaAIevAkelGa.piaLIDRDIqvTlkRlWrvlpfleKaKllahllssvf +A++ A+ + + L DR+I vT++R++ l+f+ K Kl ++l ++ + Rabbit4Lib 25 REAFKEASRVPFcKFHLGDRPIPVTFQRAIAALTFWQKVKLAWGLCFLSD 74 egiElsedelekLlesdaldklmeeLkkiyPavykVLvdERDeyMAtkLl + d++e + d l+ m e + + P + + v ERD+y++ L Rabbit4Lib 75 PISK---DDVERCKQKDLLEQMMAEMIGEFPDLHRTIVAERDVYLTYTLR 121 niesiln.......ERKKKi..kiVAVVGaGHvrGIeryLkklsegapi< + +l+ ++ ++ E +K +++++V VVG GHv GIe++ + +e ++i Rabbit4Lib 122 QAARRLElprasdaEPRKCVpsVVVGVVGMGHVPGIEKNWS--TE-LNI 167 -* Rabbit4Lib - - // Query: Rabbit4Lib.1164.C1 204 273 520 nseq=2; translated Scores for sequence family classification (score includes all domains): Model Description Score E-value N -------- ----------- ----- ------- --- [no hits above thresholds] Parsed for domains: Model Domain seq-f seq-t hmm-f hmm-t score E-value -------- ------- ----- ----- ----- ----- ----- ------- [no hits above thresholds] Alignments of top-scoring domains: [no hits above thresholds] // Query: Rabbit4Lib.1168.C1 1481 1 828 nseq=2; minus strand; translated Scores for sequence family classification (score includes all domains): Model Description Score E-value N -------- ----------- ----- ------- --- [no hits above thresholds] Parsed for domains: Model Domain seq-f seq-t hmm-f hmm-t score E-value -------- ------- ----- ----- ----- ----- ----- ------- [no hits above thresholds] Alignments of top-scoring domains: [no hits above thresholds] // Query: Rabbit4Lib.1171.C1 41 1 266 nseq=2; translated Scores for sequence family classification (score includes all domains): Model Description Score E-value N -------- ----------- ----- ------- --- Myelin_MBP Myelin basic protein -52.6 9.1 1 Parsed for domains: Model Domain seq-f seq-t hmm-f hmm-t score E-value -------- ------- ----- ----- ----- ----- ----- ------- Myelin_MBP 1/1 1 75 [. 1 171 [] -52.6 9.1 Alignments of top-scoring domains: Myelin_MBP: domain 1 of 1, from 1 to 75: score -52.6, E = 9.1 *->AsASTsDHsrhgyGAhpRhRDsGLLDsLGrFFGqegdRkvPrkGsGK h+ ++ v Rabbit4Lib 1 ---------XHA-----------------------SEXTV------- 8 egvhaaRsvhlgslpqkahqahgRptDdnpVVHFFkNivsPrtpPpsQkk Rabbit4Lib - -------------------------------------------------- - grGlSlaitrFsWGaegqkPgYGgygsgklskhKsAykGrkdsyheGqGt lS rFsWGaegqkPg+G+ +g++ ++KsA+kG+k+ ++qGt Rabbit4Lib 9 ---LS----RFSWGAEGQKPGFGY--GGRAADYKSAHKGLKG--ADAQGT 47 LSkiFKLGgsgs.Rdrsrsg...SPmaR<-* LS++FKL s R + ++SP+ Rabbit4Lib 48 LSRLFKLEEEKSlRVAHGQTlkpSPALN 75 // Query: Rabbit4Lib.1172.C1 1802 1 914 nseq=25; minus strand; translated Scores for sequence family classification (score includes all domains): Model Description Score E-value N -------- ----------- ----- ------- --- Ribosomal_S5_C Ribosomal protein S5, C-terminal domai 149.0 8e-41 1 Ribosomal_S5 Ribosomal protein S5, N-terminal domai 139.5 5.9e-38 1 Parsed for domains: Model Domain seq-f seq-t hmm-f hmm-t score E-value -------- ------- ----- ----- ----- ----- ----- ------- Ribosomal_S5 1/1 112 178 .. 1 67 [] 139.5 5.9e-38 Ribosomal_S5_C 1/1 195 268 .. 1 75 [] 149.0 8e-41 Alignments of top-scoring domains: Ribosomal_S5: domain 1 of 1, from 112 to 178: score 139.5, E = 5.9e-38 *->dLeekVldinrVsKvtkgGRrfrFrAlVVVGDknGhVGlGiGKAkEV L+++Vl+i++V+K+t++G+r+rF+A+V++GD+nGhVGlG++++kEV Rabbit4Lib 112 ALKDEVLKIMPVQKQTRAGQRTRFKAFVAIGDYNGHVGLGVKCSKEV 158 peAIrKAiedAKknlieVpr<-* ++AIr+Ai+ AK+++++V+r Rabbit4Lib 159 ATAIRGAIILAKLSIVPVRR 178 Ribosomal_S5_C: domain 1 of 1, from 195 to 268: score 149.0, E = 8e-41 *->vtGkcGsvkVlLrPAprGtGiiAGgvvRaVLElAGvkDvltKslGkS vtG+cGsv V+L+PAprGtGi++++v++++L++AG++D++t+++G++ Rabbit4Lib 195 VTGRCGSVLVRLIPAPRGTGIVSAPVPKKLLMMAGIDDCYTSARGCT 241 rnpiNfvkATFdALsklksaldvpalrg<-* +++Nf+kATFdA+sk++s+l +p+l++ Rabbit4Lib 242 ATLGNFAKATFDAISKTYSYL-TPDLWK 268 // Query: Rabbit4Lib.1172.C2 1533 1 798 nseq=3; minus strand; translated Scores for sequence family classification (score includes all domains): Model Description Score E-value N -------- ----------- ----- ------- --- Ribosomal_S5 Ribosomal protein S5, N-terminal domai 139.5 5.9e-38 1 Ribosomal_S5_C Ribosomal protein S5, C-terminal domai 136.3 5.7e-37 1 Parsed for domains: Model Domain seq-f seq-t hmm-f hmm-t score E-value -------- ------- ----- ----- ----- ----- ----- ------- Ribosomal_S5 1/1 111 177 .. 1 67 [] 139.5 5.9e-38 Ribosomal_S5_C 1/1 194 267 .] 1 75 [] 136.3 5.7e-37 Alignments of top-scoring domains: Ribosomal_S5: domain 1 of 1, from 111 to 177: score 139.5, E = 5.9e-38 *->dLeekVldinrVsKvtkgGRrfrFrAlVVVGDknGhVGlGiGKAkEV L+++Vl+i++V+K+t++G+r+rF+A+V++GD+nGhVGlG++++kEV Rabbit4Lib 111 ALKDEVLKIMPVQKQTRAGQRTRFKAFVAIGDYNGHVGLGVKCSKEV 157 peAIrKAiedAKknlieVpr<-* ++AIr+Ai+ AK+++++V+r Rabbit4Lib 158 ATAIRGAIILAKLSIVPVRR 177 Ribosomal_S5_C: domain 1 of 1, from 194 to 267: score 136.3, E = 5.7e-37 *->vtGkcGsvkVlLrPAprGtGiiAGgvvRaVLElAGvkDvltKslGkS vtG+cGsv V+L+PAprGtGi++++v++++L++AG++D++t+++G++ Rabbit4Lib 194 VTGRCGSVLVRLIPAPRGTGIVSAPVPKKLLMMAGIDDCYTSARGCT 240 rnpiNfvkATFdALsklksaldvpalrg<-* +++Nf+kATFdA+sk +s+l +p+ + Rabbit4Lib 241 ATLGNFAKATFDAISKSYSYL-TPDSGX 267 // Query: Rabbit4Lib.1176.C1 403 1 649 nseq=10; minus strand; translated Scores for sequence family classification (score includes all domains): Model Description Score E-value N -------- ----------- ----- ------- --- Phosducin Phosducin 299.9 3.1e-86 1 Thioredoxin Thioredoxin -43.5 1.7 1 Parsed for domains: Model Domain seq-f seq-t hmm-f hmm-t score E-value -------- ------- ----- ----- ----- ----- ----- ------- Thioredoxin 1/1 83 195 .. 1 114 [] -43.5 1.7 Phosducin 1/1 1 214 [] 1 265 [] 299.9 3.1e-86 Alignments of top-scoring domains: Thioredoxin: domain 1 of 1, from 83 to 195: score -43.5, E = 1.7 *->vvvvltdenFdeevlkaksdkpVLVdFyApWCGp........CKmlA v t+e F e + k ++ ++V + +++ ++C +l Rabbit4Lib 83 VYELETGEQFLETIEKEQKITTIVV--------HiyedgikgCDALN 121 PeyeklAqeykgesddvkfaKVDaDenpkdlAskygVrgfPTlkffknGk ++ lA ey+ vkf+K+ a n+ ++ PTl+ +k+G+ Rabbit4Lib 122 SSLTCLAAEYP----MVKFCKIKAS-NT-GAGDRFSSDVLPTLLVYKGGE 165 kepvdyvgGArt.......kddLvafikkhlg<-* +++++ ++++ ++ + d ++f+++++ Rabbit4Lib 166 L--ISNFISVAEqfaeeffAGDVESFLNEYGL 195 Phosducin: domain 1 of 1, from 1 to 214: score 299.9, E = 3.1e-86 *->gekAkSssPAElEldfEGiavnTGPKGVINDWRkFKqLEsEdrdeva + s qL +d Rabbit4Lib 1 --PRVRDS---------------------------HQLNI-SKDTRH 17 rekkrllkklSssCRsHLDEEeesrddKDlkEkiSrKMslkEyelidKdk r+ +k + e + l E + r +Eyeli+ dk Rabbit4Lib 18 RDTNYYIKSIPK---------MEEAKSHSLEEDFER----QEYELIHQDK 54 dDEefLrkYRkQrMddMrQkLskGPrykfVlEleSGEqFLdtIdKEQKiT + + ry+fV+Ele GEqFL+tI+KEQKiT Rabbit4Lib 55 EEKTAFVD-TVTVYAGHAPEAEFWARYGFVYELETGEQFLETIEKEQKIT 103 lIvVHIYEDGvkGtdAlNsslICLAAEYPtVKFCkvkaSviGAsdRFsrd +IvVHIYEDG+kG+dAlNssl CLAAEYP+VKFCk+kaS++GA+dRFs+d Rabbit4Lib 104 TIVVHIYEDGIKGCDALNSSLTCLAAEYPMVKFCKIKASNTGAGDRFSSD 153 vLPaLLvYKaGELlsNFvrVTdQLaEdFFavDlEaFLnEyGLLPEKEvlV vLP+LLvYK+GEL+sNF++V +Q aE+FFa+D+E+FLnEyGLLPE+E+ Rabbit4Lib 154 VLPTLLVYKGGELISNFISVAEQFAEEFFAGDVESFLNEYGLLPEREMQA 203 LesvrnsAtCHsEdeDlE<-* Le+++ deD+E Rabbit4Lib 204 LEQTNT-------DEDME 214 // Query: Rabbit4Lib.1176.C2 462 58 828 nseq=3; minus strand; translated Scores for sequence family classification (score includes all domains): Model Description Score E-value N -------- ----------- ----- ------- --- Phosducin Phosducin 439.0 4.1e-128 1 BSD BSD domain -3.5 4.8 1 Thioredoxin Thioredoxin -41.7 1.2 1 Parsed for domains: Model Domain seq-f seq-t hmm-f hmm-t score E-value -------- ------- ----- ----- ----- ----- ----- ------- BSD 1/1 74 138 .. 1 68 [] -3.5 4.8 Thioredoxin 1/1 127 234 .. 1 114 [] -41.7 1.2 Phosducin 1/1 15 255 .. 1 265 [] 439.0 4.1e-128 Alignments of top-scoring domains: BSD: domain 1 of 1, from 74 to 138: score -3.5, E = 4.8 *->dlkpsdswdnefdldekteehiqalLkedpaLrklynelVPkk...v d+k+ ++++ + +++ +++e l +d++ ++++ + V + ++ Rabbit4Lib 74 DDKDAKDRL-GRKMSIQEYE----LIHQDKEEKTAFVDTVTVYaghA 115 steeeFWarYFyllrkillkeeqr<-* + e+eFWarY + +++ ++ + Rabbit4Lib 116 P-EAEFWARYGFVYELETGEQFLE 138 Thioredoxin: domain 1 of 1, from 127 to 234: score -41.7, E = 1.2 *->vvvvltdenFdeevlkaksdkpVLVdFyApWCGp........CKmlA v t+e F e + k ++ ++V + +++ ++C +l Rabbit4Lib 127 VYELETGEQFLETIEKEQKITTIVV--------HiyedgikgCDALN 165 PeyeklAqeykgesddvkfaKVDaDenpkdlAskygVrgfPTlkffknGk ++ lA ey+ vkf+K+ a n+ ++ PTl+ +k+G+ Rabbit4Lib 166 SSLTCLAAEYP----MVKFCKIKAS-NT-GAGDRFSSDVLPTLLVYKGGE 209 kepvdyvgGArt..kddLvafikkhlg<-* +++++ ++++ ++++ + + + + Rabbit4Lib 210 L--ISNFISVAEqfAEEFLQGMWSLSY 234 Phosducin: domain 1 of 1, from 15 to 255: score 439.0, E = 4.1e-128 *->gekAkSssPAElEldfEGiavnTGPKGVINDWRkFKqLEsEdrdeva +e AkS s lE+dfEG+a +TGPKGVINDWRkFK LEsEd+d+v Rabbit4Lib 15 MEEAKSHS---LEEDFEGQATHTGPKGVINDWRKFK-LESEDSDSVP 57 rekkrllkklSssCRsHLDEEeesrddKDlkEkiSrKMslkEyelidKdk +kk++l+++Ss ++s+ddKD k ++ rKMs++Eyeli+ dk Rabbit4Lib 58 PSKKEILRQMSS---------PQSKDDKDAKDRLGRKMSIQEYELIHQDK 98 dDEefLrkYRkQrMddMrQkLskGPrykfVlEleSGEqFLdtIdKEQKiT + + ry+fV+Ele GEqFL+tI+KEQKiT Rabbit4Lib 99 EEKTAFVD-TVTVYAGHAPEAEFWARYGFVYELETGEQFLETIEKEQKIT 147 lIvVHIYEDGvkGtdAlNsslICLAAEYPtVKFCkvkaSviGAsdRFsrd +IvVHIYEDG+kG+dAlNssl CLAAEYP+VKFCk+kaS++GA+dRFs+d Rabbit4Lib 148 TIVVHIYEDGIKGCDALNSSLTCLAAEYPMVKFCKIKASNTGAGDRFSSD 197 vLPaLLvYKaGELlsNFvrVTdQLaEdFFavDlEaFLnEyGLLPEKEvlV vLP+LLvYK+GEL+sNF++V +Q aE+F + + + EyG Rabbit4Lib 198 VLPTLLVYKGGELISNFISVAEQFAEEFLQG-MWSLSYEYGYYLRERCKX 246 LesvrnsAtCHsEdeDlE<-* Le+++ deD Rabbit4Lib 247 LEQTNT-------DED-- 255 // Query: Rabbit4Lib.1176.C3 441 64 824 nseq=2; minus strand; translated Scores for sequence family classification (score includes all domains): Model Description Score E-value N -------- ----------- ----- ------- --- Phosducin Phosducin 400.7 1.4e-116 1 BSD BSD domain -3.5 4.8 1 Parsed for domains: Model Domain seq-f seq-t hmm-f hmm-t score E-value -------- ------- ----- ----- ----- ----- ----- ------- BSD 1/1 74 138 .. 1 68 [] -3.5 4.8 Phosducin 1/1 15 248 .. 1 265 [] 400.7 1.4e-116 Alignments of top-scoring domains: BSD: domain 1 of 1, from 74 to 138: score -3.5, E = 4.8 *->dlkpsdswdnefdldekteehiqalLkedpaLrklynelVPkk...v d+k+ ++++ + +++ +++e l +d++ ++++ + V + ++ Rabbit4Lib 74 DDKDAKDRL-GRKMSIQEYE----LIHQDKEEKTAFVDTVTVYaghA 115 steeeFWarYFyllrkillkeeqr<-* + e+eFWarY + +++ ++ + Rabbit4Lib 116 P-EAEFWARYGFVYELETGEQFLE 138 Phosducin: domain 1 of 1, from 15 to 248: score 400.7, E = 1.4e-116 *->gekAkSssPAElEldfEGiavnTGPKGVINDWRkFKqLEsEdrdeva +e AkS s lE+dfEG+a +TGPKGVINDWRkFK LEsEd+d+v Rabbit4Lib 15 MEEAKSHS---LEEDFEGQATHTGPKGVINDWRKFK-LESEDSDSVP 57 rekkrllkklSssCRsHLDEEeesrddKDlkEkiSrKMslkEyelidKdk +kk++l+++Ss ++s+ddKD k ++ rKMs++Eyeli+ dk Rabbit4Lib 58 PSKKEILRQMSS---------PQSKDDKDAKDRLGRKMSIQEYELIHQDK 98 dDEefLrkYRkQrMddMrQkLskGPrykfVlEleSGEqFLdtIdKEQKiT + + ry+fV+Ele GEqFL+tI+KEQKiT Rabbit4Lib 99 EEKTAFVD-TVTVYAGHAPEAEFWARYGFVYELETGEQFLETIEKEQKIT 147 lIvVHIYEDGvkGtdAlNsslICLAAEYPtVKFCkvkaSviGAsdRFsrd +IvVHIYEDG+kG+dAlNssl CLAAEYP+VKFCk+kaS++GA+dRFs+d Rabbit4Lib 148 TIVVHIYEDGIKGCDALNSSLTCLAAEYPMVKFCKIKASNTGAGDRFSSD 197 vLPaLLvYKaGELlsNFvrVTdQLaEdFFavDlEaFLnEyGLLPEKEvlV vLP+LL K+ s ++V +Q aE+ Fa+D+E EyG Rabbit4Lib 198 VLPTLLSTKGENXXSIXISVAEQFAEEXFAGDVEXXPHEYGY-------- 239 LesvrnsAtCHsEdeDlE<-* r d lE Rabbit4Lib 240 --YLRR-------DAALE 248 // Query: Rabbit4Lib.1176.C4 495 47 800 nseq=2; minus strand; translated Scores for sequence family classification (score includes all domains): Model Description Score E-value N -------- ----------- ----- ------- --- Phosducin Phosducin 440.5 1.5e-128 1 BSD BSD domain -3.5 4.8 1 Thioredoxin Thioredoxin -43.5 1.8 1 Parsed for domains: Model Domain seq-f seq-t hmm-f hmm-t score E-value -------- ------- ----- ----- ----- ----- ----- ------- BSD 1/1 74 138 .. 1 68 [] -3.5 4.8 Thioredoxin 1/1 127 222 .. 1 114 [] -43.5 1.8 Phosducin 1/1 15 249 .. 1 265 [] 440.5 1.5e-128 Alignments of top-scoring domains: BSD: domain 1 of 1, from 74 to 138: score -3.5, E = 4.8 *->dlkpsdswdnefdldekteehiqalLkedpaLrklynelVPkk...v d+k+ ++++ + +++ +++e l +d++ ++++ + V + ++ Rabbit4Lib 74 DDKDAKDRL-GRKMSIQEYE----LIHQDKEEKTAFVDTVTVYaghA 115 steeeFWarYFyllrkillkeeqr<-* + e+eFWarY + +++ ++ + Rabbit4Lib 116 P-EAEFWARYGFVYELETGEQFLE 138 Thioredoxin: domain 1 of 1, from 127 to 222: score -43.5, E = 1.8 *->vvvvltdenFdeevlkaksdkpVLVdFyApWCGp........CKmlA v t+e F e + k ++ ++V + +++ ++C +l Rabbit4Lib 127 VYELETGEQFLETIEKEQKITTIVV--------HiyedgikgCDALN 165 PeyeklAqeykgesddvkfaKVDaDenpkdlAskygVrgfPTlkffknGk ++ lA ey+ vkf+K+ a n+ ++ PTl+ +k+G+ Rabbit4Lib 166 SSLTCLAAEYP----MVKFCKIKAS-NT-GAGDRFSSDVLPTLLVYKGGE 209 kepvdyvgGArtkddLvafikkhlg<-* +++++ ++++ + Rabbit4Lib 210 L--ISNFIS----------VAEQFA 222 Phosducin: domain 1 of 1, from 15 to 249: score 440.5, E = 1.5e-128 *->gekAkSssPAElEldfEGiavnTGPKGVINDWRkFKqLEsEdrdeva +e AkS s lE+dfEG+a +TGPKGVINDWRkFK LEsEd+d+v Rabbit4Lib 15 MEEAKSHS---LEEDFEGQATHTGPKGVINDWRKFK-LESEDSDSVP 57 rekkrllkklSssCRsHLDEEeesrddKDlkEkiSrKMslkEyelidKdk +kk++l+++Ss ++s+ddKD k ++ rKMs++Eyeli+ dk Rabbit4Lib 58 PSKKEILRQMSS---------PQSKDDKDAKDRLGRKMSIQEYELIHQDK 98 dDEefLrkYRkQrMddMrQkLskGPrykfVlEleSGEqFLdtIdKEQKiT + + ry+fV+Ele GEqFL+tI+KEQKiT Rabbit4Lib 99 EEKTAFVD-TVTVYAGHAPEAEFWARYGFVYELETGEQFLETIEKEQKIT 147 lIvVHIYEDGvkGtdAlNsslICLAAEYPtVKFCkvkaSviGAsdRFsrd +IvVHIYEDG+kG+dAlNssl CLAAEYP+VKFCk+kaS++GA+dRFs+d Rabbit4Lib 148 TIVVHIYEDGIKGCDALNSSLTCLAAEYPMVKFCKIKASNTGAGDRFSSD 197 vLPaLLvYKaGELlsNFvrVTdQLaEdFFavDlEaFLnEyGLLPEKEvlV vLP+LLvYK+GEL+sNF++V +Q aE+FFa D+E Rabbit4Lib 198 VLPTLLVYKGGELISNFISVAEQFAEEFFARDVE---------------- 231 LesvrnsAtCHsEdeDlE<-* s ++ d lE Rabbit4Lib 232 FSSMNMGYYPXERDAALE 249 // Query: Rabbit4Lib.1177.C1 295 122 346 nseq=8; minus strand; translated Scores for sequence family classification (score includes all domains): Model Description Score E-value N -------- ----------- ----- ------- --- [no hits above thresholds] Parsed for domains: Model Domain seq-f seq-t hmm-f hmm-t score E-value -------- ------- ----- ----- ----- ----- ----- ------- [no hits above thresholds] Alignments of top-scoring domains: [no hits above thresholds] // Query: Rabbit4Lib.1183.C1 199 688 965 nseq=4; translated Scores for sequence family classification (score includes all domains): Model Description Score E-value N -------- ----------- ----- ------- --- [no hits above thresholds] Parsed for domains: Model Domain seq-f seq-t hmm-f hmm-t score E-value -------- ------- ----- ----- ----- ----- ----- ------- [no hits above thresholds] Alignments of top-scoring domains: [no hits above thresholds] // Query: Rabbit4Lib.1183.C2 291 593 919 nseq=2; minus strand; translated Scores for sequence family classification (score includes all domains): Model Description Score E-value N -------- ----------- ----- ------- --- [no hits above thresholds] Parsed for domains: Model Domain seq-f seq-t hmm-f hmm-t score E-value -------- ------- ----- ----- ----- ----- ----- ------- [no hits above thresholds] Alignments of top-scoring domains: [no hits above thresholds] // Query: Rabbit4Lib.1184.C1 2260 241 1077 nseq=4; minus strand; translated Scores for sequence family classification (score includes all domains): Model Description Score E-value N -------- ----------- ----- ------- --- [no hits above thresholds] Parsed for domains: Model Domain seq-f seq-t hmm-f hmm-t score E-value -------- ------- ----- ----- ----- ----- ----- ------- [no hits above thresholds] Alignments of top-scoring domains: [no hits above thresholds] // Query: Rabbit4Lib.1185.C1 930 1 584 nseq=8; minus strand; translated Scores for sequence family classification (score includes all domains): Model Description Score E-value N -------- ----------- ----- ------- --- GSHPx Glutathione peroxidase 215.8 6.2e-61 1 Parsed for domains: Model Domain seq-f seq-t hmm-f hmm-t score E-value -------- ------- ----- ----- ----- ----- ----- ------- GSHPx 1/1 40 145 .. 1 117 [] 215.8 6.2e-61 Alignments of top-scoring domains: GSHPx: domain 1 of 1, from 40 to 145: score 215.8, E = 6.2e-61 *->siYdfsakdldGepvpLdkyrGkvlLIVNVASkCGlTprqYteLneL +fsakd+dG +v LdkyrG+v++++NVAS +T+++Yt+L++L Rabbit4Lib 40 ---EFSAKDIDGRMVCLDKYRGFVCIVTNVASNEXKTDVNYTQLVDL 83 qerykdrGLvILGFPCNQFGkQEPgsNeEILngIkyfrpggGfeygVtFp ++ry+++GL+IL+FPCNQFG QEPgsN+E Ik+f++g y+V+F+ Rabbit4Lib 84 HARYAECGLRILAFPCNQFGRQEPGSNAE----IKEFAAG----YNVKFD 125 iFsKieVNGenahPLYkFLK<-* + sKi+VNG++ahPL+k++K Rabbit4Lib 126 MYSKICVNGDDAHPLWKWMK 145 // Query: Rabbit4Lib.1191.C1 711 1 432 nseq=2; minus strand; translated Scores for sequence family classification (score includes all domains): Model Description Score E-value N -------- ----------- ----- ------- --- [no hits above thresholds] Parsed for domains: Model Domain seq-f seq-t hmm-f hmm-t score E-value -------- ------- ----- ----- ----- ----- ----- ------- [no hits above thresholds] Alignments of top-scoring domains: [no hits above thresholds] // Query: Rabbit4Lib.1193.C1 252 211 579 nseq=2; translated Scores for sequence family classification (score includes all domains): Model Description Score E-value N -------- ----------- ----- ------- --- [no hits above thresholds] Parsed for domains: Model Domain seq-f seq-t hmm-f hmm-t score E-value -------- ------- ----- ----- ----- ----- ----- ------- [no hits above thresholds] Alignments of top-scoring domains: [no hits above thresholds] // Query: Rabbit4Lib.1195.C1 546 194 815 nseq=2; minus strand; translated Scores for sequence family classification (score includes all domains): Model Description Score E-value N -------- ----------- ----- ------- --- RTP801_C RTP801 C-terminal region 251.5 1.2e-71 1 Parsed for domains: Model Domain seq-f seq-t hmm-f hmm-t score E-value -------- ------- ----- ----- ----- ----- ----- ------- RTP801_C 1/1 78 196 .. 1 120 [] 251.5 1.2e-71 Alignments of top-scoring domains: RTP801_C: domain 1 of 1, from 78 to 196: score 251.5, E = 1.2e-71 *->LsdAKqrsLrCskvllPekLtqriaqEllrLSesEPCGlRGclidvc Ls++Kq++L+Cskvl+PekLtqriaq++lrLS++EPCGlRGc+i+v+ Rabbit4Lib 78 LSKSKQTKLGCSKVLVPEKLTQRIAQDVLRLSSTEPCGLRGCVIHVN 124 vEqePksckrvAqikvDpsvVptFeLtLvLRlDsrlWpslqglFssrskl +E e +ck++++i++D svVptFeLtLv++++ + W+s ++F+sr+++ Rabbit4Lib 125 LEVE-SVCKKLDRIVCDSSVVPTFELTLVFKQENCSWTSFRDFFFSRGRF 173 spglkrtLtLSpgFrviKkKLYS<-* s+g++rtL+LS+gFr++KkKLYS Rabbit4Lib 174 SSGIRRTLILSSGFRLVKKKLYS 196 // Query: Rabbit4Lib.1196.C1 986 1 914 nseq=3; minus strand; translated Scores for sequence family classification (score includes all domains): Model Description Score E-value N -------- ----------- ----- ------- --- PKD PKD domain 26.4 0.00067 1 Parsed for domains: Model Domain seq-f seq-t hmm-f hmm-t score E-value -------- ------- ----- ----- ----- ----- ----- ------- PKD 1/1 235 306 .] 1 92 [] 26.4 0.00067 Alignments of top-scoring domains: PKD: domain 1 of 1, from 235 to 306: score 26.4, E = 0.00067 *->vsasaveegpsvvalgetVtFtassSydpd....p.gspvsysWdFG + ++ + + +++ tF +++ +d+++ ++g+++sy+WdFG Rabbit4Lib 235 LDGG-----NKRFLRNQPLTFAIQL---HDpsgyLdGADLSYTWDFG 273 DggstgltstepnvtHtYskgsVtpGtYtVtLtvsNgvgsasattttvtV D g+++l+ + vtHtY++ pG t++++ ++ + Rabbit4Lib 274 D-GTGTLIFRAFVVTHTYLE----PGPVTAQVV------------LQGAI 306 <-* Rabbit4Lib - - // Query: Rabbit4Lib.1196.C2 432 11 505 nseq=4; minus strand; translated Scores for sequence family classification (score includes all domains): Model Description Score E-value N -------- ----------- ----- ------- --- [no hits above thresholds] Parsed for domains: Model Domain seq-f seq-t hmm-f hmm-t score E-value -------- ------- ----- ----- ----- ----- ----- ------- [no hits above thresholds] Alignments of top-scoring domains: [no hits above thresholds] // Query: Rabbit4Lib.1197.C1 964 16 1014 nseq=4; minus strand; translated Scores for sequence family classification (score includes all domains): Model Description Score E-value N -------- ----------- ----- ------- --- Ribonuclease_3 RNase3 domain 28.5 0.00015 1 dsrm Double-stranded RNA binding motif 6.8 0.17 1 Parsed for domains: Model Domain seq-f seq-t hmm-f hmm-t score E-value -------- ------- ----- ----- ----- ----- ----- ------- Ribonuclease_3 1/1 123 207 .. 1 93 [] 28.5 0.00015 dsrm 1/1 237 304 .. 1 74 [] 6.8 0.17 Alignments of top-scoring domains: Ribonuclease_3: domain 1 of 1, from 123 to 207: score 28.5, E = 0.00015 *->ERLEFLGDaVLnlvvseyLykkkfPdlsEGeLsklRaalVsnetLak + L G ++ + +++L +Pdl+ l l s+e+ ++ Rabbit4Lib 123 QELSTQGSSFSRTCLTQFLE-DEYPDLPAEGIESLVDFLTSEEVVCH 168 lArklgLgkylwllgkgelksggrerpkiLADvfEAliGAiYLDgG<-* +Ar+l +++ l+ + + p++L +f A+iGA++ ++G Rabbit4Lib 169 VARNLAVEQLT-LSADFP------VPPSVLQQTFFAVIGALLQSSG 207 dsrm: domain 1 of 1, from 237 to 304: score 6.8, E = 0.17 *->pksaLqElaqkrklplpeYelvkeeGptPaHaprFtvevkvggktyv p+++L E + krk +pe +l++++G+ p + v ++ + k Rabbit4Lib 237 PMGLLVEELKKRKISAPESRLTRQSGS-TTALPLYFVGLYCDKK--- 279 rktfgeGsGsSKKeAkqaAAeaALekL<-* +++eG G + +A+ +AA+ AL+kL Rabbit4Lib 280 --LIAEGPGETVLVAEEEAARVALRKL 304 // Query: Rabbit4Lib.1198.C1 493 123 590 nseq=3; minus strand; translated Scores for sequence family classification (score includes all domains): Model Description Score E-value N -------- ----------- ----- ------- --- [no hits above thresholds] Parsed for domains: Model Domain seq-f seq-t hmm-f hmm-t score E-value -------- ------- ----- ----- ----- ----- ----- ------- [no hits above thresholds] Alignments of top-scoring domains: [no hits above thresholds] // Query: Rabbit4Lib.1200.C1 2994 33 1011 nseq=2; minus strand; translated Scores for sequence family classification (score includes all domains): Model Description Score E-value N -------- ----------- ----- ------- --- [no hits above thresholds] Parsed for domains: Model Domain seq-f seq-t hmm-f hmm-t score E-value -------- ------- ----- ----- ----- ----- ----- ------- [no hits above thresholds] Alignments of top-scoring domains: [no hits above thresholds] // Query: Rabbit4Lib.1203.C1 553 82 1375 nseq=10; translated Scores for sequence family classification (score includes all domains): Model Description Score E-value N -------- ----------- ----- ------- --- Cathelicidins Cathelicidin -2.9 7.7 1 Parsed for domains: Model Domain seq-f seq-t hmm-f hmm-t score E-value -------- ------- ----- ----- ----- ----- ----- ------- Cathelicidins 1/1 113 173 .. 1 67 [] -2.9 7.7 Alignments of top-scoring domains: Cathelicidins: domain 1 of 1, from 113 to 173: score -2.9, E = 7.7 *->aLsYrEaVlrAvdq..lNeqsseanLYRLLeldpppqddedpdtpkp L + aV r vd+++l e+ s ++ LLe +pp+++ ++p Rabbit4Lib 113 LLGLEVAVTRVVDHksLVEEGSKQPNHCLLEQTPPQRMLSEP----- 154 vsFrVKETvCprttqqppeqCd<-* rV T C+ t+ + Rabbit4Lib 155 ---RVQSTPCGGTSMLKEKTXQ 173 // Query: Rabbit4Lib.1205.C1 885 1 616 nseq=2; minus strand; translated Scores for sequence family classification (score includes all domains): Model Description Score E-value N -------- ----------- ----- ------- --- Actin Actin 259.6 4.2e-74 1 Parsed for domains: Model Domain seq-f seq-t hmm-f hmm-t score E-value -------- ------- ----- ----- ----- ----- ----- ------- Actin 1/1 1 205 [] 1 373 [] 259.6 4.2e-74 Alignments of top-scoring domains: Actin: domain 1 of 1, from 1 to 205: score 259.6, E = 4.2e-74 *->qalvvDnGsgmvKaGfaGddapravfpsivgrpkhkgvmvgggmdqk Rabbit4Lib 1 ----------------------------------------X------ 1 dayvgdEaqskrgiltlkYPiehGivtnwddmekiwhhtfYnELrvapee Rabbit4Lib - -------------------------------------------------- - HpvLLtEaPlnPKanREkmtqimFEtfnvpamYvaiqavLsLyasGRttG Rabbit4Lib - -------------------------------------------------- - ivlDsGDGvsHtvpiyeGyalpHailrldlAGRDLtdylmkiLtergysf pHai+rldlAGRDLtdylmkiLtergysf Rabbit4Lib 2 ---------------------PHAIMRLDLAGRDLTDYLMKILTERGYSF 30 tttAerEivrdiKEkLcyvAldyeeelktakesseleksyeLpDGqviti ttAerEivrdiKEkLcyvAld+e+e++ta++ss+leksyeLpDGqviti Rabbit4Lib 31 VTTAEREIVRDIKEKLCYVALDFENEMATAASSSSLEKSYELPDGQVITI 80 gneRfrcpevLfqpsllggkEaagihettynsimkCDvDiRkdLygnivL gneRfrcpe+Lfqps++ g+E+agihettynsimkCD+DiRkdLy+n vL Rabbit4Lib 81 GNERFRCPETLFQPSFI-GMESAGIHETTYNSIMKCDIDIRKDLYANNVL 129 sGGttmfpgiaerlskeitalaPssmkikviapPeRkysvWiGGsilasL sGGttm+pgia+r++keitalaPs+mkik+iapPeRkysvWiGGsilasL Rabbit4Lib 130 SGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASL 179 stFqqmwitKeeYdesGpsivHrKCf<-* stFqqmwi+K+eYde+GpsivHrKCf Rabbit4Lib 180 STFQQMWISKQEYDEAGPSIVHRKCF 205 // Query: Rabbit4Lib.1206.C1 156 395 668 nseq=2; minus strand; translated Scores for sequence family classification (score includes all domains): Model Description Score E-value N -------- ----------- ----- ------- --- [no hits above thresholds] Parsed for domains: Model Domain seq-f seq-t hmm-f hmm-t score E-value -------- ------- ----- ----- ----- ----- ----- ------- [no hits above thresholds] Alignments of top-scoring domains: [no hits above thresholds] // Query: Rabbit4Lib.1207.C1 470 1 243 nseq=6; minus strand; translated Scores for sequence family classification (score includes all domains): Model Description Score E-value N -------- ----------- ----- ------- --- efhand EF hand 28.2 0.0002 1 Parsed for domains: Model Domain seq-f seq-t hmm-f hmm-t score E-value -------- ------- ----- ----- ----- ----- ----- ------- efhand 1/1 25 53 .. 1 29 [] 28.2 0.0002 Alignments of top-scoring domains: efhand: domain 1 of 1, from 25 to 53: score 28.2, E = 0.0002 *->elkeaFkefDkDgDGkIsfeEfkaalkkl<-* ++++F ++D +gDG++s++Ef+++ ++ Rabbit4Lib 25 VVDRIFLLVDENGDGQLSLNEFIEGARRD 53 // Query: Rabbit4Lib.1208.C1 364 156 507 nseq=2; minus strand; translated Scores for sequence family classification (score includes all domains): Model Description Score E-value N -------- ----------- ----- ------- --- JTB Jumping translocation breakpoint protein (JT 120.0 4.4e-32 1 Parsed for domains: Model Domain seq-f seq-t hmm-f hmm-t score E-value -------- ------- ----- ----- ----- ----- ----- ------- JTB 1/1 5 113 .. 1 120 [] 120.0 4.4e-32 Alignments of top-scoring domains: JTB: domain 1 of 1, from 5 to 113: score 120.0, E = 4.4e-32 *->AeapvreEklvvstsnseCWkvEeFvvveeCaPCsnFeIvsKslkAG A++ E l n++CW+vEeFvv+eeC CsnF+ K+++ Rabbit4Lib 5 AGGEAVSEHL-----NLPCWLVEEFVVAEECTACSNFQT--KTTP-- 42 eClkTGYfekitCssSkrnvlRSCDRsAlmserheF.ykFevsvvaiaLv eC++TGY+eki CssSkrn+++SC s F + e++v +aLv Rabbit4Lib 43 ECGSTGYVEKIMCSSSKRNEFKSC---XFGSDGTAFvLEIEGAVLGVALV 89 sfllviiRqrqLdRkaymrvrkql<-* +++lvii + +++vrkq+ Rabbit4Lib 90 FACLVIIDSDNWTERLLEKVRKQI 113 // Query: Rabbit4Lib.1210.C1 567 1 768 nseq=2; minus strand; translated Scores for sequence family classification (score includes all domains): Model Description Score E-value N -------- ----------- ----- ------- --- ZZ Zinc finger, ZZ type 47.3 3.3e-10 1 C1_3 C1-like domain 15.4 0.052 1 C1_2 C1 domain 5.4 4.8 1 Parsed for domains: Model Domain seq-f seq-t hmm-f hmm-t score E-value -------- ------- ----- ----- ----- ----- ----- ------- C1_2 1/1 57 85 .. 1 32 [] 5.4 4.8 C1_3 1/1 56 85 .. 1 30 [] 15.4 0.052 ZZ 1/1 52 95 .. 1 46 [] 47.3 3.3e-10 Alignments of top-scoring domains: C1_2: domain 1 of 1, from 57 to 85: score 5.4, E = 4.8 *->sCgvCrrkidgfygfYsCkkccddftlHvrCA<-* C+ C + g+ +Y+C+ c+d++l C Rabbit4Lib 57 ICDGCNGPVVGT--RYKCSV-CPDYDLCGACE 85 C1_3: domain 1 of 1, from 56 to 85: score 15.4, E = 0.052 *->ktCdaCglpidgdpfYsCseC.dFvlHeeCa<-* Cd C p+ g Y+Cs C+d++l+ +C Rabbit4Lib 56 VICDGCNGPVVG-TRYKCSVCpDYDLCGACE 85 ZZ: domain 1 of 1, from 52 to 95: score 47.3, E = 3.3e-10 *->ihkvytCdgCkeapiigvRYhClrCsdYDLCqsCfstGhkagkHkm< h ++CdgC p +g+RY+C +C+dYDLC C+ + +H Rabbit4Lib 52 VHPNVICDGCNG-PVVGTRYKCSVCPDYDLCGACEAK-GLHQEHSK 95 -* Rabbit4Lib - - // Query: Rabbit4Lib.1214.C1 553 1 213 nseq=3; minus strand; translated Scores for sequence family classification (score includes all domains): Model Description Score E-value N -------- ----------- ----- ------- --- [no hits above thresholds] Parsed for domains: Model Domain seq-f seq-t hmm-f hmm-t score E-value -------- ------- ----- ----- ----- ----- ----- ------- [no hits above thresholds] Alignments of top-scoring domains: [no hits above thresholds] // Query: Rabbit4Lib.1216.C1 1549 1 703 nseq=4; minus strand; translated Scores for sequence family classification (score includes all domains): Model Description Score E-value N -------- ----------- ----- ------- --- Ldh_1_C lactate/malate dehydrogenase, alpha/beta C-t 239.0 6.5e-68 1 Ldh_1_N lactate/malate dehydrogenase, NAD binding do -55.0 1.8 1 Parsed for domains: Model Domain seq-f seq-t hmm-f hmm-t score E-value -------- ------- ----- ----- ----- ----- ----- ------- Ldh_1_N 1/1 1 64 [. 1 153 [] -55.0 1.8 Ldh_1_C 1/1 66 230 .. 1 181 [] 239.0 6.5e-68 Alignments of top-scoring domains: Ldh_1_N: domain 1 of 1, from 1 to 64: score -55.0, E = 1.8 *->tKVaVvGAGGgVGsslAfalanlqgladEqpIiLvLvDinkamdkae + a++ Rabbit4Lib 1 ----------------------XSTHASD------------------ 7 GvamDLqHgsaflsvpgiiggdqdyealkDaDvVvItAGvpqkPGeTRlD D Rabbit4Lib 8 -------------------------------------------------D 8 LlnrNakIfksivpaiaksapdaivlVvsNPVDiltyiawkvsKKaGlpk L+n Na I+++++ a+ a +a++++++NPV+++ +i+++v+KK+G+++ Rabbit4Lib 9 LFNTNATIVATLAAACPSIAXEAMICIIANPVNSTIPITAEVFKKHGVYN 58 ervigs<-* +++i++ Rabbit4Lib 59 PNRIFG 64 Ldh_1_C: domain 1 of 1, from 66 to 230: score 239.0, E = 6.5e-68 *->TnLDtaRfrtllAeklgvkdPrsvhvyiiGEHGDsevPvWShAnvgG T+LD++R++t++Ae +g+ dP+ v+v++iG+H++ ++ Rabbit4Lib 66 TTLDIVRANTFVAELKGL-DPARVNVPVIGGHAG----------KTI 101 vpleslvkelgedsddeleelierVqdaAyeVIeaKaGaGsTtysiAlAl +pl+s++++++++ +d+l++l+ r+q+a++eV++aKaGaGs+t+s+A+A+ Rabbit4Lib 102 IPLISQCTPKVDFPQDQLAALTGRIQEAGTEVVKAKAGAGSATLSMAYAG 151 AriaeaiLrdtpEnrvlpvsvyldGfyGipddelvyfsvPvvLgrnGvee Ar++ ++L+++ n+ ++v++++f+++++ yfs+P++Lg++G+e+ Rabbit4Lib 152 ARFVFSLLDAM--NGK--EGVVECSFVQSQEADSSYFSTPLLLGKKGLEK 197 vvegllpLndeEreklekSadtLkkiiekgfafv<-* + +++ +++E+++++ + ++Lk++i+kg++fv Rabbit4Lib 198 NLG-IGKVSPFEEKMIAEAIPELKASIKKGEDFV 230 // Query: Rabbit4Lib.1217.C1 641 250 749 nseq=2; minus strand; translated Scores for sequence family classification (score includes all domains): Model Description Score E-value N -------- ----------- ----- ------- --- [no hits above thresholds] Parsed for domains: Model Domain seq-f seq-t hmm-f hmm-t score E-value -------- ------- ----- ----- ----- ----- ----- ------- [no hits above thresholds] Alignments of top-scoring domains: [no hits above thresholds] // Query: Rabbit4Lib.1217.C2 641 149 648 nseq=2; minus strand; translated Scores for sequence family classification (score includes all domains): Model Description Score E-value N -------- ----------- ----- ------- --- [no hits above thresholds] Parsed for domains: Model Domain seq-f seq-t hmm-f hmm-t score E-value -------- ------- ----- ----- ----- ----- ----- ------- [no hits above thresholds] Alignments of top-scoring domains: [no hits above thresholds] // Query: Rabbit4Lib.1217.C3 900 144 857 nseq=2; minus strand; translated Scores for sequence family classification (score includes all domains): Model Description Score E-value N -------- ----------- ----- ------- --- bZIP_Maf bZIP Maf transcription factor 200.6 2.4e-56 1 M M protein repeat 13.8 4.1 1 bZIP_2 Basic region leucine zipper 6.5 0.95 1 bZIP_1 bZIP transcription factor 0.2 1 1 Parsed for domains: Model Domain seq-f seq-t hmm-f hmm-t score E-value -------- ------- ----- ----- ----- ----- ----- ------- M 1/1 181 201 .. 1 21 [] 13.8 4.1 bZIP_2 1/1 156 210 .. 1 57 [] 6.5 0.95 bZIP_1 1/1 156 220 .. 1 65 [] 0.2 1 bZIP_Maf 1/1 129 223 .. 1 97 [] 200.6 2.4e-56 Alignments of top-scoring domains: M: domain 1 of 1, from 181 to 201: score 13.8, E = 4.1 *->eaKKeLEaelqeLeeelqkLe<-* ++ + LEae++ L ++l++L Rabbit4Lib 181 QQRRGLEAERARLAAQLDALR 201 bZIP_2: domain 1 of 1, from 156 to 210: score 6.5, E = 0.95 *->kddeyrdrRrlrNneAAkrsReKkKqreeeleervkeLeeeNaqLLk + +rR l+N+ A+ +R K+ q +le + +L ++ ++L Rabbit4Lib 156 ALRLKQRRRTLKNRGYAQACRSKRLQQRRGLEAERARLAAQLDAL-- 200 rqkveqLekE<-* r++v++L +E Rabbit4Lib 201 RAEVARLARE 210 bZIP_1: domain 1 of 1, from 156 to 220: score 0.2, E = 1 *->ekelKrerRkqkNReAArrsRlRKqaeieeLeekveeLeaeNkaLrk +lK rR kNR A+ +R ++++ Le + + L a+ +aLr Rabbit4Lib 156 ALRLKQRRRTLKNRGYAQACRSKRLQQRRGLEAERARLAAQLDALRA 202 elerLkkevakLksenee<-* e+ rL e + k Rabbit4Lib 203 EVARLARERDLYKARCDR 220 bZIP_Maf: domain 1 of 1, from 129 to 223: score 200.6, E = 2.4e-56 *->drlSDdeLvsmSVRELNrtLkLRGlsrEEVvRLKQrRRTLKNRGYAq +r+SD++LvsmSVRELNr +LRG+ r+E++RLKQrRRTLKNRGYAq Rabbit4Lib 129 ERFSDAALVSMSVRELNR--QLRGCGRDEALRLKQRRRTLKNRGYAQ 173 SCRiKRVqQrheLEkekseLqqqveqLkeEvsrlrrErDaykakyeaLqs +CR+KR+qQr+ LE+e+++L++q+++L++Ev+rl+rErD+yka++++L+s Rabbit4Lib 174 ACRSKRLQQRRGLEAERARLAAQLDALRAEVARLARERDLYKARCDRLTS 223 <-* Rabbit4Lib - - // Query: Rabbit4Lib.1219.C1 416 46 782 nseq=2; minus strand; translated Scores for sequence family classification (score includes all domains): Model Description Score E-value N -------- ----------- ----- ------- --- K_tetra K+ channel tetramerisation domain -6.3 0.015 1 Parsed for domains: Model Domain seq-f seq-t hmm-f hmm-t score E-value -------- ------- ----- ----- ----- ----- ----- ------- K_tetra 1/1 2 65 .. 1 102 [] -6.3 0.015 Alignments of top-scoring domains: K_tetra: domain 1 of 1, from 2 to 65: score -6.3, E = 0.015 *->vrLNVGGkrFeTsksTLtrfkPdTlLgrllktdsheailrlcdfydd ++ +L+ f d Rabbit4Lib 2 -----------VNGKILCPF--------------------------D 11 dtnEyFFDRsPkhFetILnfYRtGdGkLhrpevcldsfleEleFygldel +++ yF+DR+ +F+++Lnf+R G L++ + + + +E+eF++l +l Rabbit4Lib 12 ADGHYFIDRDGLLFRHVLNFLRNGELLLPEGFRENQLLAQEAEFFQLKGL 61 aielC<-* e+ Rabbit4Lib 62 -AEEV 65 // Query: Rabbit4Lib.1221.C1 972 1 972 nseq=2; minus strand; translated Scores for sequence family classification (score includes all domains): Model Description Score E-value N -------- ----------- ----- ------- --- Nucleoplasmin Nucleoplasmin 267.1 2.3e-76 1 Uso1_p115_C Uso1 / p115 like vesicle tethering prot -28.1 9.1 1 HD-ZIP_N HD-ZIP protein N terminus -38.7 9.7 1 Parsed for domains: Model Domain seq-f seq-t hmm-f hmm-t score E-value -------- ------- ----- ----- ----- ----- ----- ------- HD-ZIP_N 1/1 84 173 .. 1 157 [] -38.7 9.7 Uso1_p115_C 1/1 83 206 .. 1 151 [] -28.1 9.1 Nucleoplasmin 1/1 38 235 .. 1 281 [] 267.1 2.3e-76 Alignments of top-scoring domains: HD-ZIP_N: domain 1 of 1, from 84 to 173: score -38.7, E = 9.7 *->mherkDEqYGGLdLGLGLSLSLsfpqnsantastwpTssRlNlmPlt ++e + ++ +++ t Rabbit4Lib 84 IVEAEA---------M------NYEGSPIK---------------VT 100 ssplslnlaPsssttqqlCgwnsgglfsssssssrsrqrmmaesdvears + l ++++P+ s l g ++++ ++ +++ + +++ + v Rabbit4Lib 101 LATLKMSVQPTVS----LGGFEITPPVVLRLKCGSGPVHISGQHLVA--- 143 FLRGIDVNRlPstvietttARGPstVDvdEEEdaGVLvVSSPNSTvSStv V + + ++ D+ EEEd L+ S + Rabbit4Lib 144 ------VEEDAESE------------DE-EEEDV-KLL---------S-I 163 SGKRSereee<-* SGKRS++ Rabbit4Lib 164 SGKRSAPGGG 173 Uso1_p115_C: domain 1 of 1, from 83 to 206: score -28.1, E = 9.1 *->akievEaeseqnlaAkaleletrllsdaynsLeQknkalen.Eaeea +e Ea + + k +++ ++ +Q + l+ E +++ Rabbit4Lib 83 HIVEAEAMNYEGSPIKVTLATLKM-------SVQPTVSLGGfEITPP 122 vvkaLkearlarkkeleksksttkdleaikekLdeEKqsADAAqDalkes vv Lk +++++ + + + d+E + + Rabbit4Lib 123 VVLRLKC---------GSGPVHISGQHLVAVEEDAE---------S-EDE 153 qkEqdDLLvLLaDqee.....KvtkykekLkdLGveVSeddkllegigdd + E LL + ++++++Kv k kL +edd + ++ dd Rabbit4Lib 154 EEEDVKLLSISGKRSApgggsKVPQKKVKLAA-----EEDD--EDDDDDD 196 eededeDeee<-* ++ded+D+++ Rabbit4Lib 197 DDDEDDDDDD 206 Nucleoplasmin: domain 1 of 1, from 38 to 235: score 267.1, E = 2.3e-76 *->maeeyffGceLskdKKiFKWdaesksftfkVdeEedaisHkLaLkqi +++ y+fGceL+ ++k + fkVd +e++ H+L+L+++ Rabbit4Lib 38 RPQNYLFGCELK----------ADKDYHFKVDNDENE--HQLSLR