[Bioperl-l] Little question about Bio::SeqIO::fastq

Juan Jovel jovel_juan at hotmail.com
Mon May 21 13:32:22 UTC 2012


Hello All!
When using 'Bio::SeqIO::fastq' how can I access each of the lines of a fastq entries?
I need to split multiplexed libraries from MiSeq runs (which outputs in fastq format), and therefore I want to access the 'id' line of each sequence (@) to be able to split the file according to Illumina indices. How to do that?
thanks a lot in advance.
Juan  		 	   		  



More information about the Bioperl-l mailing list