[Bioperl-l] verify format

bill at genenformics.com bill at genenformics.com
Wed Jul 15 23:09:51 UTC 2009


Hopefully this is helpful!

http://www.ncbi.nlm.nih.gov/IEB/ToolBox/CPP_DOC/lxr/source/src/util/format_guess.cpp#L838



> Hi,
>
> I'm computer scientist and I'm new in the bioinformatics world, and
> bioperl ...
>
> I have a small problem :
>
> I have a file, which has to be in FASTA format, but it could be wrong.
> So, I need :
> - to verify if my file is well-written in fasta format
> - to verify is the content of the fasta file is protein OR nucloetides
>
> I think there surely exists someting in bioperl to that but I didn't
> find anything.
>
> Thank for your help
>
> tkd
>
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>





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