[Bioperl-l] Indexing CDS file

Dave Messina David.Messina at sbc.su.se
Wed Feb 11 08:39:55 EST 2009


[Chris]

> Could probably use Bio::Annotation::DBLink or Bio::Annotation::Target for
> it (if it corresponds to a particular subset of the sequence).
>

Okay, will do. I took a look at the DBSOURCE handling code in SeqIO::genbank
and will model it after that.




> [Heikki]
>
>> Dave,
>>
>> Looks good. Are you going to do the changes in to the EMBL parser?
>>
>
Thanks. Yes, I'll do it, probably later today.


D


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