[Bioperl-l] GFF and LocatableSeq refactoring

[Chris Fields]

On Aug 16, 2009, at 10:13 AM, Hilmar Lapp wrote:

> On Aug 15, 2009, at 10:49 PM, Chris Fields wrote:
>
>> Not sure about calling it bioperl-phylo (which might be confused  
>> with Rutger's Bio::Phylo).
>
>
> Frankly, it seems to me that either is more powerful in combination  
> with the other, so I don't quite see how the name suggesting some  
> linkage isn't a Good Thing rather than bad.
>
> 	-hilmar

I don't have a problem as long as there is some emphasis they are two  
separate, but related, projects.  There is quite a bit of crossover  
between the two (particularly with the last few bioperl-related GSoC  
projects), but I would rather not have to worry about users emailing  
the list wondering why something in bioperl-phylo doesn't work when  
they installed Bio::Phylo instead (or vice-versa).  Maybe Bio::Phylo  
could be added as a recommended module with bioperl-phylo to alleviate  
that?

chris