[Bioperl-l] Problems with Bioperl-ext package on WinVista?

[Jonny Dalzell]

OK,

so is there any particular C-compiler which I should use?

Thanks,
jonny



Robert Buels wrote:
> 
> Elaborating more, the 'C-compiled engine' error comes because 
> Bio::Ext::HMM is not installed, because bioperl-ext is not installed 
> (correctly), because Bio::Ext::HMM is an XS extension written in C. 
> Which needs to be compiled.  With a C compiler.  As part of some kind of 
> installation process, not just copying the files to a machine with 
> subversion.
> 
> Rob
> 
> Robert Buels wrote:
>> Jonny,
>> 
>> For quicker help you might want to try #bioperl on freenode.
>> 
>> That said, the problem here is that when you get code from subversion, 
>> you are not really 'installing' it, you are just copying it to your 
>> machine.  Part of the installation process is compiling these things, 
>> and for that you need a working C compiler.
>> 
>> I don't know anything about using BioPerl on Windows, but as a general 
>> recommendation I would say go back to the CPAN and/or ppm directions and 
>> getting those working.
>> 
>> Rob
>> 
>> 
> 
> 
> -- 
> Robert Buels
> Bioinformatics Analyst, Sol Genomics Network
> Boyce Thompson Institute for Plant Research
> Tower Rd
> Ithaca, NY  14853
> Tel: 503-889-8539
> rmb32 at cornell.edu
> http://www.sgn.cornell.edu
> _______________________________________________
> Bioperl-l mailing list
> Bioperl-l at lists.open-bio.org
> http://lists.open-bio.org/mailman/listinfo/bioperl-l
> 
> 

-- 
View this message in context: http://www.nabble.com/Problems-with-Bioperl-ext-package-on-WinVista--tp24919498p24925211.html
Sent from the Perl - Bioperl-L mailing list archive at Nabble.com.