[Bioperl-l] EntrezGene test failures

[Chris Fields]

I'm getting failed tests from entrezgene.t off CVS HEAD.  Using './ 
Build test --test_files t/entrezgene.t --verbose':

..
ok 1367
ok 1368 - correct number of loops for T18
# Looks like you planned 1417 tests but only ran 1368.
# Looks like you failed 22 tests of 1368 run.
dubious
         Test returned status 22 (wstat 5632, 0x1600)
DIED. FAILED tests 56, 162, 182, 184, 367, 512, 603, 631, 667, 711,  
766, 920, 998, 1107, 1140, 1192, 1225, 1248, 1270, 1297, 1320, 1345,  
1369-1417
         Failed 71/1417 tests, 94.99% okay
Failed Test    Stat Wstat Total Fail  List of Failed
------------------------------------------------------------------------ 
-------
t/entrezgene.t   22  5632  1417  120  56 162 182 184 367 512 603 631  
667 711
                                       766 920 998 1107 1140 1192  
1225 1248 1270
                                       1297 1320 1345 1369-1417
Failed 1/1 test scripts. 71/1417 subtests failed.
Files=1, Tests=1417,  3 wallclock secs ( 3.06 cusr +  0.09 csys =   
3.15 CPU)
Failed 1/1 test programs. 71/1417 subtests failed.



Looks like not all tests are run.  Of the tests that fail, all are  
from unmatched values.  A few examples:


#   Failed test 'correct number of loops for T15'
#   in t/entrezgene.t at line 495.
#          got: '14'
#     expected: '16'
not ok 56 - correct number of loops for T15

...

#   Failed test 'correct number of loops for T15'
#   in t/entrezgene.t at line 495.
#          got: '28'
#     expected: '30'

...

not ok 162 - correct number of loops for T15

#   Failed test in t/entrezgene.t at line 456.
#          got: '0'
#     expected: '1'

#   Failed test 'correct number of loops for T15'
#   in t/entrezgene.t at line 495.
#          got: '6'
#     expected: '5'



chris

Christopher Fields
Postdoctoral Researcher
Lab of Dr. Robert Switzer
Dept of Biochemistry
University of Illinois Urbana-Champaign