[Bioperl-l] getting pubmed id from genbank files

[Nathan Haigh]

I want to be able to supply a list of GI's, retrieve the genbank files and
parse out the pubmed id's.

 

I know I can do the first steps of retrieving the genbank files directly,
but how do I get the pubmed id's? I've been playing around with things and
haven't yet found out if this can be done.

 

Cheers,

Nathan

 

----------------------------------

Nathan Haigh

Bioinformatics PostDoctoral Research Associate

 

Room B2 211

Department of Animal and Plant Sciences

University of Sheffield

Western Bank

Sheffield

S10 2TN

 

Tel: +44 (0)114 22 20112

Mob: +44 (0)7742 533 569

Fax: +44 (0)114 22 20002