[Bioperl-l] MSG: Replacing one sequence

Jason Stajich jason.stajich at duke.edu
Mon Jul 11 14:29:26 EDT 2005


sequence names are probably not unique.

-jason
On Jul 11, 2005, at 5:56 AM, Otto X. Cordero wrote:

> Dear all,
>
> I have a simple script that converts my alignments from fasta to  
> phylip
> format. It is mostly a copy-paste from the code in the module
> documentation, very simple stuff. I noticed that some sequences where
> replaced:
>
> -------------------- WARNING ---------------------
> MSG: Replacing one sequence [305.Q8XFS3.NR/1-1275]
>
> Can anyone explain why this happens?
>
> Thanks very much,
>
> Otto.
>
> =======================================
> Otto X. Cordero
> Theoretical Biology and Bioinformatics
> Utrecht University
> +31 30 2539043
> Room Z508, Padualaan 8, 3584 CH Utrecht
> The Netherlands
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>

--
Jason Stajich
jason.stajich at duke.edu
http://www.duke.edu/~jes12/




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