[Bioperl-l] RNA analysis

Jason Stajich jason at cgt.duhs.duke.edu
Sat Mar 13 10:18:36 EST 2004


See ViennaRNA package from Ivo Hofacker's group and their RNAFold.pl
script - there is a nice XS perl interface to the C library.

http://www.tbi.univie.ac.at/~ivo/RNA/

-jason

On Sat, 13 Mar 2004, Vesko Baev wrote:

> Is there a bioperl module(s) for RNA analysis: folding, free energy,
> RNA/RNA align or modules that connect the script with ext. RNA progs?
>
> Thenks!
> Vesko
>
> -----------------------------------------------------------------
> http://zavedenia.gbg.bg - Êúäå ùå õîäèòå òàçè âå÷åð?

--
Jason Stajich
Duke University
jason at cgt.mc.duke.edu



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