[Bioperl-l] FW: Bioperl 1.4.0(BUG)

Marc Logghe Marc.Logghe at devgen.com
Tue Dec 21 16:33:06 EST 2004


Hi all,
could it be a proxy issue ?
Madalena: in case it is, you can set it with proxy() and, if necessary, authentication() methods.
Paulo's test script could be adapted like this then:

use Bio::DB::GenBank;
$gb = new Bio::DB::GenBank;
$gb->proxy('http://myproxy');
$gb->authentication($user,$pass);
$seq = $gb->get_Seq_by_acc('AE000440');
print $seq->description;

HTH,
Marc



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