[Bioperl-l] Bio::SeqIO::staden::read problem

Aaron J. Mackey amackey at pcbi.upenn.edu
Fri Dec 17 15:24:13 EST 2004



xuying wrote:

> Running make install
> make[1]: Entering directory `/root/.cpan/build/bioperl-ext-1.4/Bio/Ext/Align'
> make[1]: Leaving directory `/root/.cpan/build/bioperl-ext-1.4/Bio/Ext/Align'
> make[1]: Entering directory `/root/.cpan/build/bioperl-ext-1.4/Bio/SeqIO/staden'
> make[1]: Leaving directory `/root/.cpan/build/bioperl-ext-1.4/Bio/SeqIO/staden'
> Installing /usr/share/man/man3/Bio::SeqIO::staden::read.3pm
> Writing /usr/lib/perl5/site_perl/5.8.0/i386-linux-thread-multi/auto/Bio/.packlist
> Appending installation info to /usr/lib/perl5/5.8.0/i386-linux-thread-multi/perllocal.pod
>   /usr/bin/make install  -- OK

No, this doesn't look entirely correct; more files should be listed as
being installed/written to.  From within the CPAN shell, type "look
Bio::SeqIO::staden" to drop into a subshell, then do a make clean, and
start over with perl Makefile.PL, make, make test, make install; send me
all the output.

-Aaron


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