[Bioperl-l] Pairwise seq. comarison

henrik nilsson rnilsson at clarku.edu
Fri Apr 2 15:42:13 EST 2004


Hi,

For two aligned (and obviously overlapping) sequences, can I use Bioperl to 
retrieve the number of differing sites in the alignment (for the overlapping 
region only, excluding the flanking regions where only one of the two 
sequences is present)?

Thanks,

RN




More information about the Bioperl-l mailing list