[Bioperl-l] tests failing miserably

Hilmar Lapp hlapp at gnf.org
Thu May 15 02:41:13 EDT 2003


I just realized that this is jason's new SearchIO sim4 parser that is 
being noisy and sloppy. So I assume this is work in progress Jason?

	-hilmar

On Wednesday, May 14, 2003, at 03:16  PM, Hilmar Lapp wrote:

> Sim4.t:
> lots of warnings in the form
> -------------------- WARNING ---------------------
> MSG: Did not defined the number of conserved matches in the HSP 
> assuming conserved == identical (118)
> ---------------------------------------------------
>
> Failures are all 0/1 mismatches like
> not ok 112
> # Test 112 got: '0' (t/Sim4.t at line 217)
> #     Expected: '1'
>
-- 
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Hilmar Lapp                            email: lapp at gnf.org
GNF, San Diego, Ca. 92121              phone: +1-858-812-1757
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