[Bioperl-l] Re: Merged my code with bioprrl-ext-06

Yee Man Chan ymc at paxil.stanford.edu
Thu Jun 5 15:01:40 EDT 2003


	Thanks, Aaron. How about I add some calls in Bio/Ext/Align/test.pl
to my module? Would that work?

Regards,
Yee Man

On Thu, 5 Jun 2003, Aaron J Mackey wrote:

> 
> OK, it's in the latest CVS checkouts of bioperl-ext and bioperl-live.
> I had to do some tweaking (mainly namespace issues), but it all seems to
> work.
> 
> Yee, it would be good if you could add some tests for dpAlign.
> 
> -Aaron
> 
> On Tue, 3 Jun 2003, Yee Man Chan wrote:
> 
> >
> > Hi Aaron,
> >
> > 	I merged my alignment code with bioperl-ext-06. I also added
> > bioperl style comments into my PM files. I posted them at
> >
> > http://www.stanford.edu/~yeeman/bioperl-ext.tar.gz
> > http://www.stanford.edu/~yeeman/dpAlign.pm
> >
> > 	The dpAlign.pm should be copied to the bioperl main distribution
> > under Bio::Tools.
> >
> > 	I think I have done all I can do on my own. What is the next step
> > to put my code in the bioperl codebase?
> >
> > Thanks a lot.
> > Yee Man
> >
> 
> -- 
>  Aaron J Mackey
>  Pearson Laboratory
>  University of Virginia
>  (434) 924-2821
>  amackey at virginia.edu
> 
> 



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