[Bioperl-l] parsing coded_by subfeature

[Jason Stajich]

See the FAQ this question #5.4
http://www.bioperl.org/Core/Latest/FAQ.html#Q5.4

-jason
On Sat, 19 Jul 2003, Jack Chen wrote:

> Hi All,
>
> I'd like to retrieve nucleotide sequence for a give protein sequence. I
> know that I could do it through coded_by subfeature, which can be rather
> messy. Say, it could be one of the following formats
>
> 	 #AF264924.1:1749..>2110
>          #AF264924.1:<254..1563
>          #join(AY260053.1:497..545,AY260053.1:610..3342,
> AY260053.1:3409..3750,AY260053.1:3810..4511, AY260053.1:4569..4960)
>
> Is their a good and unified way to do it?
>
> Thanks
>
> Jack
>
>
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--
Jason Stajich
Duke University
jason at cgt.mc.duke.edu