[Bioperl-l] Alignment Score.

Maxim Shatsky maxshats@post.tau.ac.il
Thu, 2 May 2002 16:48:52 +0300 (IDT)


Running pairwise alignment:

$factory = new Bio::Tools::pSW();
$aln = $factory->pairwise_alignment($seq1, $seq2);


Is there a way to get the alignment score?

Thanks,
 Max.