[Bioperl-l] BPlite: how to parse a file containing multiple blast results?

Mark Wilkinson mwilkinson@gene.pbi.nrc.ca
Fri, 14 Sep 2001 09:19:05 -0600


The version in the CVS repository is able to parse multiple blast reports - I
put runnable code in the documentation explaining how to do it.

M


Kun Zhang wrote:

> I did a blast search with a fasta file containing multiple sequence. In
> order to parse the blast result, I was trying the private function
> _parseHeader as suggested in the perldoc, but couldn't figure it out how to
> make it work. Any suggestion? Thanks!
>
> Kun Zhang
>
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"Speed is subsittute fo accurancy."
________________________________

Dr. Mark Wilkinson
Bioinformatics Group
National Research Council of Canada
Plant Biotechnology Institute
110 Gymnasium Place
Saskatoon, SK
Canada