[Bioperl-l] Request for direction...

[Mark Wilkinson]

So... what you are saying is:

my $Seq = Bio::SeqIO->new(-file => 'myfile', -format => 'genbank');
# Seq object contains only seqfeature generic's

$Seq->post_process;
# Seq object now contains 'proper' genes

ya?

I don't know if that task becomes easier or more difficut when there is no
longer access to the contextual information of the file being parsed, but I
suppose there is always a way...

That still doesn't answer the question at hand w.r.t. re-using exons...  Do
you want to weigh in on that debate too?

M

--
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"Speed is subsittute fo accurancy."
________________________________

Dr. Mark Wilkinson
Bioinformatics Group
National Research Council of Canada
Plant Biotechnology Institute
110 Gymnasium Place
Saskatoon, SK
Canada