[Bioperl-l] Main trunk tests failing (not serious)

Jason Stajich jason@chg.mc.duke.edu
Mon, 18 Jun 2001 10:03:23 -0400 (EDT)


BPlite was my fault, can't count that high.

Genpred is a simple fix, I've contacted Mark F to see why a certain
section that sets the seqname is commented out the module code.  Will hope
to have an answer and the fix checked in soon.

Looking good on the branch and main trunk!

On Mon, 18 Jun 2001, Ewan Birney wrote:

> 
> I doubt it is serious but we do have some main trunk tests failing:
> 
> Failed Test  Status Wstat Total Fail  Failed  List of failed
> -------------------------------------------------------------------------------
> t/BPlite.t                   76   ??       %  ??
> t/Genpred.t                  32    1   3.12%  18
> 45 subtests skipped.
> 
> 
> 
> Genpred is
> 
> not ok 18
> # Test 18 got: <UNDEF> (t/Genpred.t at line 94)
> #    Expected: 'Hvrn.contig8'
> 
> 
> and BPlite is
> 
> (we have 77 tests not 76. I'll update BPlite)
> 
> 
> No worries. 
> 
> 
> 
> -----------------------------------------------------------------
> Ewan Birney. Mobile: +44 (0)7970 151230, Work: +44 1223 494420
> <birney@ebi.ac.uk>. 
> -----------------------------------------------------------------
> 
> _______________________________________________
> Bioperl-l mailing list
> Bioperl-l@bioperl.org
> http://bioperl.org/mailman/listinfo/bioperl-l
> 

Jason Stajich
jason@chg.mc.duke.edu
Center for Human Genetics
Duke University Medical Center 
http://www.chg.duke.edu/