[Bioperl-l] tempfile creation and Bio::Tools::Run

[Jason Stajich]

will do.  I am also adding tempfile and tempdir methods to RootI.  I will
fix ClustalW and TCoffee to use tempfile properly and then move these
modules to Bio::Tools::Run::Alignment

Only problem is we'll lose our logs from cvs but we can always do some diffs
when needed.


-Jason
----- Original Message -----
From: "Peter Schattner" <schattner@alum.mit.edu>
To: "Jason Stajich" <jason@chg.mc.duke.edu>
Cc: <bioperl-l@bioperl.org>
Sent: Sunday, December 17, 2000 2:49 PM
Subject: Re: [Bioperl-l] tempfile creation and Bio::Tools::Run


> Jason Stajich wrote:
> >
> >
> > As Hilmar has suggested, how about moving modules that run external
> > applications to Bio::Tools::Run - while things that are typically
parsing
> > output from programs can stay in Bio::Tools.
> >
> > -Jason
> >
>
> Fine with me, Jason.  Can you do the moving ...?  :-)
>
> Peter
> _______________________________________________
> Bioperl-l mailing list
> Bioperl-l@bioperl.org
> http://bioperl.org/mailman/listinfo/bioperl-l
>