[Bioperl-guts-l] [Bug 3122] New: Bio::SeqIO ignores first line of piped Fasta sequence when no format parameter is set

[bugzilla-daemon at portal.open-bio.org]

http://bugzilla.open-bio.org/show_bug.cgi?id=3122

           Summary: Bio::SeqIO ignores first line of piped Fasta sequence
                    when no format parameter is set
           Product: BioPerl
           Version: unspecified
          Platform: PC
        OS/Version: Windows
            Status: NEW
          Severity: normal
          Priority: P2
         Component: Bio::SeqIO
        AssignedTo: bioperl-guts-l at bioperl.org
        ReportedBy: roy.chaudhuri at gmail.com


See discussion here:
http://lists.open-bio.org/pipermail/bioperl-l/2010-July/033683.html

When reading in a piped Fasta sequence, if the format is not specified, the
first line is ignored, and the first line of the sequence is used as the id.


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