[Bioperl-guts-l] [14542] bioperl-live/trunk/Bio/SeqIO/swiss.pm: minor edits to docs
Heikki Lehvaslaiho
heikki at dev.open-bio.org
Mon Feb 25 01:19:38 EST 2008
Revision: 14542
Author: heikki
Date: 2008-02-25 01:19:38 -0500 (Mon, 25 Feb 2008)
Log Message:
-----------
minor edits to docs
Modified Paths:
--------------
bioperl-live/trunk/Bio/SeqIO/swiss.pm
Modified: bioperl-live/trunk/Bio/SeqIO/swiss.pm
===================================================================
--- bioperl-live/trunk/Bio/SeqIO/swiss.pm 2008-02-25 06:10:48 UTC (rev 14541)
+++ bioperl-live/trunk/Bio/SeqIO/swiss.pm 2008-02-25 06:19:38 UTC (rev 14542)
@@ -36,7 +36,7 @@
=head2 GN (Gene name) line management details
-An Uniprot/Swiss-Prot entry holds information on one protein
+A Uniprot/Swiss-Prot entry holds information on one protein
sequence. If that sequence is identical across genes and species, they
are all merged into one entry. This creates complex needs for several
annotation fields in swiss-prot format.
@@ -45,8 +45,8 @@
http://www.expasy.ch/sprot/userman.html#GN_line
-Each of the possibly multiple genes in an entry can have name,
-synonyms (only if there is a name), OrderedLocusNames (names from
+Each of the possibly multiple genes in an entry can have Name,
+Synonyms (only if there is a name), OrderedLocusNames (names from
genomic sequences) and ORFNames (temporary or cosmid names). "Name"
here really means "symbol". This complexity is now dealth with the
following way:
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