June 2004 Archives by thread

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Starting: Tue Jun 1 09:50:52 EST 2004
Ending: Wed Jun 30 17:57:27 EST 2004
Messages: 220

• [Bioperl-guts-l] bioperl commit   Jason Stajich
• [Bioperl-guts-l] bioperl commit   Jason Stajich
• [Bioperl-guts-l] [Bug 1647] New: Unbalanced parens in genbank.pm   bugzilla-daemon at portal.open-bio.org
• [Bioperl-guts-l] [Bug 1644] non-matching sequence casuses sim4 parsing to silently abort early   bugzilla-daemon at portal.open-bio.org
• [Bioperl-guts-l] bioperl commit   Marc Logghe
• [Bioperl-guts-l] [Bug 1648] New: Bio::SeqIO::embl unnecessarily restricts the ID line   bugzilla-daemon at portal.open-bio.org
• [Bioperl-guts-l] [Bug 1648] Bio::SeqIO::embl unnecessarily restricts the ID line   bugzilla-daemon at portal.open-bio.org
• [Bioperl-guts-l] bioperl commit   Jason Stajich
• [Bioperl-guts-l] help with installing bioperl-ext-1.4   srikanth patury
  • [Bioperl-guts-l] help with installing bioperl-ext-1.4   Aaron J. Mackey
• [Bioperl-guts-l] bioperl commit   Jason Stajich
• [Bioperl-guts-l] bioperl commit   Jason Stajich
• [Bioperl-guts-l] [Bug 1649] New: Incorrect parsing of WU-BLAST outputs with -noseqs option.   bugzilla-daemon at portal.open-bio.org
• [Bioperl-guts-l] [Bug 1649] Incorrect parsing of WU-BLAST outputs with -noseqs option.   bugzilla-daemon at portal.open-bio.org
• [Bioperl-guts-l] [Bug 1649] Incorrect parsing of WU-BLAST outputs with -noseqs option.   bugzilla-daemon at portal.open-bio.org
• [Bioperl-guts-l] [Bug 1649] Incorrect parsing of WU-BLAST outputs with -noseqs option.   bugzilla-daemon at portal.open-bio.org
• [Bioperl-guts-l] [Bug 1649] Incorrect parsing of WU-BLAST outputs with -noseqs option.   bugzilla-daemon at portal.open-bio.org
• [Bioperl-guts-l] [Bug 1649] Incorrect parsing of WU-BLAST outputs with -noseqs option.   bugzilla-daemon at portal.open-bio.org
• [Bioperl-guts-l] [Bug 1650] New: genbank comment line truncated with write_seq   bugzilla-daemon at portal.open-bio.org
• [Bioperl-guts-l] [Bug 1649] Incorrect parsing of WU-BLAST outputs with -noseqs option.   bugzilla-daemon at portal.open-bio.org
• [Bioperl-guts-l] bioperl commit   Jason Stajich
• [Bioperl-guts-l] bioperl commit   Jason Stajich
• [Bioperl-guts-l] bioperl commit   Jason Stajich
• [Bioperl-guts-l] bioperl commit   Jason Stajich
• [Bioperl-guts-l] [Bug 1650] genbank comment line truncated with write_seq   bugzilla-daemon at portal.open-bio.org
• [Bioperl-guts-l] [Bug 1650] genbank comment line truncated with write_seq   bugzilla-daemon at portal.open-bio.org
• [Bioperl-guts-l] [Bug 1650] genbank comment line truncated with write_seq   bugzilla-daemon at portal.open-bio.org
• [Bioperl-guts-l] bioperl commit   Brian Osborne
• [Bioperl-guts-l] bioperl commit   Jason Stajich
• [Bioperl-guts-l] [Bug 1651] New: Gap shifting with Bio::AlignIO and 'needle' file format   bugzilla-daemon at portal.open-bio.org
• [Bioperl-guts-l] [Bug 1651] Gap shifting with Bio::AlignIO and 'needle' file format   bugzilla-daemon at portal.open-bio.org
• [Bioperl-guts-l] [Bug 1651] Gap shifting with Bio::AlignIO and 'needle' file format   bugzilla-daemon at portal.open-bio.org
• [Bioperl-guts-l] bioperl commit   Lincoln Stein
• [Bioperl-guts-l] [Bug 1648] Bio::SeqIO::embl unnecessarily restricts the ID line   bugzilla-daemon at portal.open-bio.org
• [Bioperl-guts-l] [Bug 1586] SimpleValueAdaptor does not accept values of 0   bugzilla-daemon at portal.open-bio.org
• [Bioperl-guts-l] [Bug 1586] SimpleValueAdaptor does not accept values of 0   bugzilla-daemon at portal.open-bio.org
• [Bioperl-guts-l] [Bug 1586] SimpleValueAdaptor does not accept values of 0   bugzilla-daemon at portal.open-bio.org
• [Bioperl-guts-l] bioperl commit   Hilmar Lapp
• [Bioperl-guts-l] bioperl commit   Hilmar Lapp
• [Bioperl-guts-l] bioperl commit   Hilmar Lapp
• [Bioperl-guts-l] bioperl commit   Hilmar Lapp
• [Bioperl-guts-l] bioperl commit   Hilmar Lapp
• [Bioperl-guts-l] bioperl commit   Hilmar Lapp
• [Bioperl-guts-l] bioperl commit   Hilmar Lapp
• [Bioperl-guts-l] bioperl commit   Yee Man Chan
• [Bioperl-guts-l] bioperl commit   Yee Man Chan
• [Bioperl-guts-l] bioperl commit   Lincoln Stein
• [Bioperl-guts-l] bioperl commit   Lincoln Stein
• [Bioperl-guts-l] bioperl commit   Yee Man Chan
• [Bioperl-guts-l] bioperl commit   Lincoln Stein
• [Bioperl-guts-l] bioperl commit   Lincoln Stein
• [Bioperl-guts-l] bioperl commit   Lincoln Stein
• [Bioperl-guts-l] bioperl commit   Lincoln Stein
• [Bioperl-guts-l] bioperl commit   Lincoln Stein
• [Bioperl-guts-l] bioperl commit   Lincoln Stein
• [Bioperl-guts-l] bioperl commit   Lincoln Stein
• [Bioperl-guts-l] bioperl commit   Juguang Xiao
• [Bioperl-guts-l] bioperl commit   Brian Osborne
• [Bioperl-guts-l] bioperl commit   Sheldon Mckay
• [Bioperl-guts-l] RootI.pm tweak   Greg Sabino Mullane
  • [Bioperl-guts-l] RootI.pm tweak   Jason Stajich
    • [Bioperl-guts-l] RootI.pm tweak   Greg Sabino Mullane
• [Bioperl-guts-l] bioperl commit   Jason Stajich
• [Bioperl-guts-l] bioperl commit   Lincoln Stein
• [Bioperl-guts-l] bioperl commit   Lincoln Stein
• [Bioperl-guts-l] bioperl commit   Lincoln Stein
• [Bioperl-guts-l] bioperl commit   Lincoln Stein
• [Bioperl-guts-l] bioperl commit   Lincoln Stein
• [Bioperl-guts-l] bioperl commit   Lincoln Stein
• [Bioperl-guts-l] bioperl commit   Brian Osborne
• [Bioperl-guts-l] [Bug 1652] New: AlignIO & MSF Files   bugzilla-daemon at portal.open-bio.org
• [Bioperl-guts-l] [Bug 1652] AlignIO & MSF Files   bugzilla-daemon at portal.open-bio.org
• [Bioperl-guts-l] [Bug 1653] New: all Bio::Search::Hit::BlastHit objects have rank 1   bugzilla-daemon at portal.open-bio.org
• [Bioperl-guts-l] [Bug 1652] AlignIO & MSF Files   bugzilla-daemon at portal.open-bio.org
• [Bioperl-guts-l] [Bug 1653] all Bio::Search::Hit::BlastHit objects have rank 1   bugzilla-daemon at portal.open-bio.org
  • [Bioperl-guts-l] [Bug 1653] all Bio::Search::Hit::BlastHit objects have rank 1   Steve Chervitz
    • [Bioperl-guts-l] [Bug 1653] all Bio::Search::Hit::BlastHit objects have rank 1   Jason Stajich
• [Bioperl-guts-l] bioperl commit   Sheldon Mckay
• [Bioperl-guts-l] bioperl commit   Jason Stajich
• [Bioperl-guts-l] bioperl commit   Jason Stajich
• [Bioperl-guts-l] bioperl commit   Jason Stajich
• [Bioperl-guts-l] bioperl commit   Jason Stajich
• [Bioperl-guts-l] bioperl commit   Lincoln Stein
• [Bioperl-guts-l] bioperl commit   Lincoln Stein
• [Bioperl-guts-l] bioperl commit   Lincoln Stein
• [Bioperl-guts-l] bioperl commit   Lincoln Stein
• [Bioperl-guts-l] bioperl commit   Brian Osborne
• [Bioperl-guts-l] bioperl commit   Josh Lauricha
  • [Bioperl-guts-l] bioperl commit   Aaron J. Mackey
• [Bioperl-guts-l] bioperl commit   Jason Stajich
• [Bioperl-guts-l] bioperl commit   Brian Osborne
• [Bioperl-guts-l] bioperl commit   Lincoln Stein
• [Bioperl-guts-l] bioperl commit   Lincoln Stein
• [Bioperl-guts-l] bioperl commit   Lincoln Stein
• [Bioperl-guts-l] bioperl commit   Lincoln Stein
• [Bioperl-guts-l] tigr(tab delimited) to genbank   Jinal Jhaveri
• [Bioperl-guts-l] tigr to genbank   Jinal Jhaveri
• [Bioperl-guts-l] bioperl commit   Jason Stajich
• [Bioperl-guts-l] bioperl commit   Jason Stajich
• [Bioperl-guts-l] bioperl commit   Jason Stajich
• [Bioperl-guts-l] [Bug 1655] New: Bio::SearchIO::Writer::* and hmmpfam   bugzilla-daemon at portal.open-bio.org
• [Bioperl-guts-l] [Bug 1655] Bio::SearchIO::Writer::* and hmmpfam   bugzilla-daemon at portal.open-bio.org
• [Bioperl-guts-l] [Bug 1655] Bio::SearchIO::Writer::* and hmmpfam   bugzilla-daemon at portal.open-bio.org
• [Bioperl-guts-l] [Bug 1653] all Bio::Search::Hit::BlastHit objects have rank 1   bugzilla-daemon at portal.open-bio.org
• [Bioperl-guts-l] bioperl commit   Jason Stajich
• [Bioperl-guts-l] bioperl commit   Jason Stajich
• [Bioperl-guts-l] bioperl commit   Aaron J Mackey
• [Bioperl-guts-l] bioperl commit   Lincoln Stein
• [Bioperl-guts-l] bioperl commit   Lincoln Stein
• [Bioperl-guts-l] bioperl commit   Jason Stajich
• [Bioperl-guts-l] bioperl commit   Jason Stajich
• [Bioperl-guts-l] bioperl commit   Jason Stajich
• [Bioperl-guts-l] bioperl commit   Lincoln Stein
• [Bioperl-guts-l] bioperl commit   Lincoln Stein
• [Bioperl-guts-l] bioperl commit   Lincoln Stein
• [Bioperl-guts-l] bioperl commit   Lincoln Stein
• [Bioperl-guts-l] [Bug 1656] New: TreeIO::nexus is parsing out tree names, but never storing them   bugzilla-daemon at portal.open-bio.org
• [Bioperl-guts-l] [Bug 1656] TreeIO::nexus is parsing out tree names, but never storing them   bugzilla-daemon at portal.open-bio.org
• [Bioperl-guts-l] bioperl commit   Jason Stajich
• [Bioperl-guts-l] bioperl commit   Jason Stajich
• [Bioperl-guts-l] bioperl commit   Jason Stajich
• [Bioperl-guts-l] bioperl commit   Brian Osborne
• [Bioperl-guts-l] bioperl commit   Hilmar Lapp
• [Bioperl-guts-l] [Bug 1657] New: Bio::Tools::Run::Primer3 -> Run() method getting wrong program_name argument   bugzilla-daemon at portal.open-bio.org
• [Bioperl-guts-l] bioperl commit   Jason Stajich
• [Bioperl-guts-l] bioperl commit   Lincoln Stein
• [Bioperl-guts-l] bioperl commit   Jason Stajich
• [Bioperl-guts-l] bioperl commit   Brian Osborne
• [Bioperl-guts-l] bioperl commit   Brian Osborne
• [Bioperl-guts-l] [Bug 1656] TreeIO::nexus is parsing out tree names, but never storing them   bugzilla-daemon at portal.open-bio.org
• [Bioperl-guts-l] bioperl commit   Jason Stajich
• [Bioperl-guts-l] bioperl commit   Jason Stajich
• [Bioperl-guts-l] bioperl commit   Jason Stajich
• [Bioperl-guts-l] bioperl commit   Jason Stajich
• [Bioperl-guts-l] [Bug 1658] New: Bio::Tools::Run::Hmmer & parameters   bugzilla-daemon at portal.open-bio.org
• [Bioperl-guts-l] bioperl commit   Shawn Hoon
• [Bioperl-guts-l] [Bug 1658] Bio::Tools::Run::Hmmer & parameters   bugzilla-daemon at portal.open-bio.org
• [Bioperl-guts-l] bioperl commit   Jason Stajich
• [Bioperl-guts-l] bioperl commit   Jason Stajich
• [Bioperl-guts-l] bioperl commit   Jason Stajich
• [Bioperl-guts-l] bioperl commit   Jason Stajich
• [Bioperl-guts-l] bioperl commit   Jason Stajich
• [Bioperl-guts-l] bioperl commit   Jason Stajich
• [Bioperl-guts-l] bioperl commit   Jason Stajich
• [Bioperl-guts-l] bioperl commit   Jason Stajich
• [Bioperl-guts-l] bioperl commit   Aaron J Mackey
• [Bioperl-guts-l] bioperl commit   Brian Osborne
• [Bioperl-guts-l] bioperl commit   Jason Stajich
• [Bioperl-guts-l] bioperl commit   Jason Stajich
• [Bioperl-guts-l] bioperl commit   Jason Stajich
• [Bioperl-guts-l] bioperl commit   Jason Stajich
• [Bioperl-guts-l] [Bug 1611] Bio::Search::Result::BlastResult add_hit() does not have expected behaviour   bugzilla-daemon at portal.open-bio.org
• [Bioperl-guts-l] bioperl commit   Jason Stajich
• [Bioperl-guts-l] bioperl commit   Jason Stajich
• [Bioperl-guts-l] bioperl commit   Jason Stajich
• [Bioperl-guts-l] ■欲しい物を自由に手に入れたい方■今、８千万円あったら■将来、１億円あったら■楽してもうけるか！００６０７号A   ＫＫＢ通信
• [Bioperl-guts-l] A user at our website is getting opinions about: bioperl-guts-l@bioperl.org   OPINION.SUPPORT at SHAREYEXP.US
• [Bioperl-guts-l] bioperl commit   Jason Stajich
• [Bioperl-guts-l] bioperl commit   Jason Stajich
• [Bioperl-guts-l] bioperl commit   Jason Stajich
• [Bioperl-guts-l] bioperl commit   Jason Stajich
• [Bioperl-guts-l] [Bug 1641] documentation of anchored_arrow glyph   bugzilla-daemon at portal.open-bio.org
• [Bioperl-guts-l] bioperl commit   Jason Stajich
• [Bioperl-guts-l] [Bug 1659] New: 100.11% ok tests prevents BioPerl from installing   bugzilla-daemon at portal.open-bio.org
• [Bioperl-guts-l] [Bug 1659] 100.11% ok tests prevents BioPerl from installing   bugzilla-daemon at portal.open-bio.org
• [Bioperl-guts-l] [Bug 1658] Bio::Tools::Run::Hmmer & parameters   bugzilla-daemon at portal.open-bio.org
• [Bioperl-guts-l] [Bug 1659] 100.11% ok tests prevents BioPerl from installing   bugzilla-daemon at portal.open-bio.org
• [Bioperl-guts-l] [Bug 1658] Bio::Tools::Run::Hmmer & parameters   bugzilla-daemon at portal.open-bio.org
• [Bioperl-guts-l] [Bug 1656] TreeIO::nexus is parsing out tree names, but never storing them   bugzilla-daemon at portal.open-bio.org
• [Bioperl-guts-l] [Bug 1658] Bio::Tools::Run::Hmmer & parameters   bugzilla-daemon at portal.open-bio.org
• [Bioperl-guts-l] bioperl commit   Shawn Hoon
• [Bioperl-guts-l] bioperl commit   Shawn Hoon
• [Bioperl-guts-l] [Bug 1658] Bio::Tools::Run::Hmmer & parameters   bugzilla-daemon at portal.open-bio.org
• [Bioperl-guts-l] bioperl commit   Shawn Hoon
• [Bioperl-guts-l] bioperl commit   Shawn Hoon
• [Bioperl-guts-l] bioperl commit   Shawn Hoon
• [Bioperl-guts-l] bioperl commit   Brian Osborne
• [Bioperl-guts-l] [Bug 1619] Bio::TreeIO::nexus - fix to allow it to read nexus trees from MrBayes   bugzilla-daemon at portal.open-bio.org
• [Bioperl-guts-l] [Bug 1656] TreeIO::nexus is parsing out tree names, but never storing them   bugzilla-daemon at portal.open-bio.org
• [Bioperl-guts-l] bioperl commit   Shawn Hoon
• [Bioperl-guts-l] bioperl commit   Shawn Hoon
• [Bioperl-guts-l] bioperl commit   Shawn Hoon
• [Bioperl-guts-l] bioperl commit   Brian Osborne
• [Bioperl-guts-l] [Bug 1619] Bio::TreeIO::nexus - fix to allow it to read nexus trees from MrBayes   bugzilla-daemon at portal.open-bio.org
• [Bioperl-guts-l] [Bug 1619] Bio::TreeIO::nexus - fix to allow it to read nexus trees from MrBayes   bugzilla-daemon at portal.open-bio.org
• [Bioperl-guts-l] [Bug 1619] Bio::TreeIO::nexus - fix to allow it to read nexus trees from MrBayes   bugzilla-daemon at portal.open-bio.org
• [Bioperl-guts-l] bioperl commit   Jason Stajich
• [Bioperl-guts-l] bioperl commit   Jason Stajich
• [Bioperl-guts-l] [Bug 1632] parse embl datas to genbank   bugzilla-daemon at portal.open-bio.org
• [Bioperl-guts-l] [Bug 1633] bug for EMBL format with no FT or FH but with SQ   bugzilla-daemon at portal.open-bio.org
• [Bioperl-guts-l] bioperl commit   Jason Stajich
• [Bioperl-guts-l] bioperl commit   Jason Stajich
• [Bioperl-guts-l] [Bug 1634] Bio::SearchIO::Writer::HTMLResultWriter Generating Warnings   bugzilla-daemon at portal.open-bio.org
• [Bioperl-guts-l] [Bug 1641] documentation of anchored_arrow glyph   bugzilla-daemon at portal.open-bio.org
• [Bioperl-guts-l] bioperl commit   Jason Stajich
• [Bioperl-guts-l] bioperl commit   Jason Stajich
• [Bioperl-guts-l] [Bug 1644] non-matching sequence casuses sim4 parsing to silently abort early   bugzilla-daemon at portal.open-bio.org
• [Bioperl-guts-l] [Bug 1646] clustalw.pm alignment output format bug   bugzilla-daemon at portal.open-bio.org
• [Bioperl-guts-l] bioperl commit   Jason Stajich
• [Bioperl-guts-l] bioperl commit   Jason Stajich
• [Bioperl-guts-l] bioperl commit   Jason Stajich
• [Bioperl-guts-l] bioperl commit   Jason Stajich
• [Bioperl-guts-l] bioperl commit   Jason Stajich
• [Bioperl-guts-l] [Bug 1619] Bio::TreeIO::nexus - fix to allow it to read nexus trees from MrBayes   bugzilla-daemon at portal.open-bio.org
• [Bioperl-guts-l] [Bug 1656] TreeIO::nexus is parsing out tree names, but never storing them   bugzilla-daemon at portal.open-bio.org
• [Bioperl-guts-l] [Bug 1619] Bio::TreeIO::nexus - fix to allow it to read nexus trees from MrBayes   bugzilla-daemon at portal.open-bio.org
• [Bioperl-guts-l] bioperl commit   Jason Stajich
• [Bioperl-guts-l] bioperl commit   Jason Stajich
• [Bioperl-guts-l] bioperl commit   Jason Stajich
• [Bioperl-guts-l] bioperl commit   Jason Stajich
• [Bioperl-guts-l] [Bug 1628] Bio::DB::FileCache and non-existing sequences: K.O.   bugzilla-daemon at portal.open-bio.org
• [Bioperl-guts-l] bioperl commit   Jason Stajich
• [Bioperl-guts-l] bioperl commit   Jason Stajich
• [Bioperl-guts-l] bioperl commit   Jason Stajich
• [Bioperl-guts-l] [Bug 1585] Feature Request: Modules for accessing FPC file   bugzilla-daemon at portal.open-bio.org
• [Bioperl-guts-l] bioperl commit   Jason Stajich
• [Bioperl-guts-l] bioperl commit   Jason Stajich
• [Bioperl-guts-l] bioperl commit   Jason Stajich
• [Bioperl-guts-l] bioperl commit   Jason Stajich
• [Bioperl-guts-l] bioperl commit   Lincoln Stein

Last message date: Wed Jun 30 17:57:27 EST 2004
Archived on: Wed Jun 30 17:40:10 EST 2004

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• More info on this list...