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<p class="MsoNormal">Hi Martin, <br>
</p>
<p class="MsoNormal">Great start - you were the first to complete
the coding exercise! I realize that the
exercise missed a few important points including the format of the
resulting submission, so now I added that. It would help if you
could update your project accordingly. You can find further
details on the <a class="moz-txt-link-freetext" href="http://biojava.org/wiki/Short_coding_exercise">http://biojava.org/wiki/Short_coding_exercise</a> page.
<br>
</p>
<p class="MsoNormal">Do not forget to write your project plan it is
very important too. I'd
recommend you to keep an eye on the BioJava mailing list
discussions, as you may find some useful information there. <br>
<br>
Thanks for your interest in the project and good luck with your
application!<br>
Peter<br>
<br>
P.S. I know I can download the source via Google SVN but I would
prefer to have
everything in one place.<span style=""> </span></p>
<br>
On 24/03/2011 19:32, Martin Koch wrote:
<blockquote
cite="mid:AANLkTin888VjFsfJO3sHHJLxwRhYfuzGWd95E6bBiHmZ@mail.gmail.com"
type="cite">Dear Peter,<br>
<br>
i just read about the short programming exercise for GSoC.<br>
and just started coding around<br>
<a moz-do-not-send="true"
href="http://code.google.com/p/findends/"></a><br>
my next step is to introduce multi threading..<br>
But actually i have a working version and strong interest to
participate<br>
all the best<br>
martin<br>
<br>
<br>
<br>
<br>
<br>
<div class="gmail_quote">2011/2/24 Peter Troshin <span dir="ltr"><<a
moz-do-not-send="true"
href="mailto:p.v.troshin@dundee.ac.uk">p.v.troshin@dundee.ac.uk</a>></span><br>
<blockquote class="gmail_quote" style="margin: 0pt 0pt 0pt
0.8ex; border-left: 1px solid rgb(204, 204, 204);
padding-left: 1ex;">
Hi,<br>
<br>
I've noticed that BioJava up to about version 1.7 had an
org.biojava.bio.proteomics package, which had methods for
isoelectric point and molecular weight calculations for
peptides. I could not find this package in the BioJava 3.0.1
API. I’d like to use these methods and wonder if there are any
equivalent methods available in the latest version of BioJava?<br>
<br>
Thank you for your help,<br>
<br>
Kind regards,<br>
Peter<br>
<br>
Dr Peter Troshin<br>
Bioinformatics Software Developer<br>
Phone: +44 (0)1382 388589<br>
Fax: +44 (0)1382 385764<br>
The Barton Group<br>
College of Life Sciences<br>
Medical Sciences Institute<br>
University of Dundee<br>
Dundee<br>
DD1 5EH<br>
UK<br>
<br>
<br>
<br>
_______________________________________________<br>
Biojava-l mailing list - <a moz-do-not-send="true"
href="mailto:Biojava-l@lists.open-bio.org" target="_blank">Biojava-l@lists.open-bio.org</a><br>
<a moz-do-not-send="true"
href="http://lists.open-bio.org/mailman/listinfo/biojava-l"
target="_blank">http://lists.open-bio.org/mailman/listinfo/biojava-l</a><br>
</blockquote>
</div>
<br>
</blockquote>
<br>
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