From mconnor at npl.co.uk Sun Jan 2 16:15:29 2005 From: mconnor at npl.co.uk (Minnie I. Connor) Date: Sun Jan 2 16:20:57 2005 Subject: [Biojava-dev] Order Royal Replica Watches Online Message-ID: <2f7001c4f110$94a799a0$59e9f6c7@teliamobile.fi> Get the Finest Rolex Watch Replica! We only sell premium watches. There's no battery in these replicas just like the real ones since they charge themselves as you move. The second hand moves JUST like the real ones, too. These original watches sell in stores for thousands of dollars. We sell them for much less. - Replicated to the Smallest Detail - 98% Perfectly Accurate Markings - Signature Green Sticker w/ Serial Number on Watch Back - Magnified Quickset Date - Includes all Proper Markings Visit us: http://www.selyn.com/rep/rolx/ No thanks: http://www.selyn.com/z.php From willierosas at dsschile.cl Sun Jan 2 21:20:19 2005 From: willierosas at dsschile.cl (Willie R. Rosas) Date: Mon Jan 3 02:20:46 2005 Subject: [Biojava-dev] New product! Cialis soft tabs. Message-ID: <32cb01c4f13a$94c1f837$478f728d@smithgroup.com.au> Hi! We have a new product that we offer to you, C_I_A_L_I_S soft tabs, Cialis Soft Tabs is the new impotence treatment drug that everyone is talking about.Soft Tabs acts up to 36 hours, compare this to only two or three hours of Viagra action! The active ingredient is Tadalafil, same as in brand Cialis. Simply disolve half a pill under your tongue, 10 min before sex, for the best erections you've ever had! Soft Tabs also have less sidebacks (you can drive or mix alcohol drinks with them). You can get it at: http://999-best.com/soft/ No thanks: http://999-best.com/rr.php From kimberlyc_waddell at ateknik.dk Sun Jan 2 21:25:10 2005 From: kimberlyc_waddell at ateknik.dk (Kimberly C. Waddell) Date: Mon Jan 3 02:20:56 2005 Subject: [Biojava-dev] Tadalafil Soft Tabs - Great results! Message-ID: <2eb101c4f13b$7106bc36$fc1691d1@medizin-forum.de> Hi! We have a new product that we offer to you, C_I_A_L_I_S soft tabs, Cialis Soft Tabs is the new impotence treatment drug that everyone is talking about.Soft Tabs acts up to 36 hours, compare this to only two or three hours of Viagra action! The active ingredient is Tadalafil, same as in brand Cialis. Simply disolve half a pill under your tongue, 10 min before sex, for the best erections you've ever had! Soft Tabs also have less sidebacks (you can drive or mix alcohol drinks with them). You can get it at: http://999-best.com/soft/ No thanks: http://999-best.com/rr.php From rupertfranklin at infinity.cz Mon Jan 3 03:33:09 2005 From: rupertfranklin at infinity.cz (Rupert Franklin) Date: Mon Jan 3 08:18:06 2005 Subject: [Biojava-dev] Increase the volume of your ejaculation. Message-ID: <572401c4f16e$ed7306e6$d03fb156@reservoir-prod.fr> Heya! Has your cum ever dribbled and you wish it had shot out? Have you ever wanted to impress your girl with a huge cumshot? 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Look here: http://blah-rx.com/enter.php No thanks: http://blah-rx.com/rr.php From 19k at 19kkanser.com Mon Jan 3 08:33:30 2005 From: 19k at 19kkanser.com (19k Sifali Bitkiler Merkezi) Date: Mon Jan 3 08:28:21 2005 Subject: [Biojava-dev] stop References: <572401c4f16e$ed7306e6$d03fb156@reservoir-prod.fr> Message-ID: <000701c4f198$d0da31a0$eeeea8c0@a24j9l3q7m93nu> ----- Original Message ----- From: "Rupert Franklin" To: Sent: Monday, January 03, 2005 10:33 AM Subject: [Biojava-dev] Increase the volume of your ejaculation. > Heya! > > Has your cum ever dribbled and you wish it had shot out? > Have you ever wanted to impress your girl with a huge cumshot? > > SPUR-M is the only site to offer an all natural male enhancement > formula that is proven to increase your sperm volume by up to 500%. > Our highly potent, volume enhancing formula will give our results > in days and comes with an impressive 100% guarantee. > > Imagine the difference (look and feel) between dribbling your cum > compared to shooting out burst after burst. Try SPUR-M now! and > with our money back guarantee you have absolutely nothing to lose! > > Look here: http://blah-rx.com/enter.php > > > > > No thanks: http://blah-rx.com/rr.php > > _______________________________________________ > biojava-dev mailing list > biojava-dev@biojava.org > http://biojava.org/mailman/listinfo/biojava-dev From l_shoemaker at easy.com.au Mon Jan 3 13:46:40 2005 From: l_shoemaker at easy.com.au (Linda Shoemaker) Date: Mon Jan 3 13:53:22 2005 Subject: [Biojava-dev] Tadalafil Soft Tabs - Great results! Message-ID: <607501c4f1c4$12158157$c2e8be2e@sonet.lublin.pl> Hi! We have a new product that we offer to you, C_I_A_L_I_S soft tabs, Cialis Soft Tabs is the new impotence treatment drug that everyone is talking about.Soft Tabs acts up to 36 hours, compare this to only two or three hours of Viagra action! The active ingredient is Tadalafil, same as in brand Cialis. Simply disolve half a pill under your tongue, 10 min before sex, for the best erections you've ever had! Soft Tabs also have less sidebacks (you can drive or mix alcohol drinks with them). You can get it at: http://999-best.com/soft/ No thanks: http://999-best.com/rr.php From eqyxpnp at freeweb.de Mon Jan 3 16:09:46 2005 From: eqyxpnp at freeweb.de (Noreen Yu) Date: Mon Jan 3 16:11:31 2005 Subject: [Biojava-dev] Do You Love Low-Priced st0cks? Message-ID: <111245836568.URH49322@date.freezemail.com> Cornett, BEF0RE WE CONTINUE - VERY IMPORTANT - it is Expected that (U A C P) will have VERY |arge PR campaign in the next 10 days & some very positive news are expected. Watch out for it . Jump on board while this stock is be|ow $1 - Huge Promo over the weekend expected Expect it to SOAR on Monday and Tuesday next week, Jump in today : Voice 0ver Internet Protocol -V0IP- Service Goes Live Symbo|: (U A C P) current price : $0.28 10 days target price : $1.25 3 Months target price : $1.66 “U A C P” current|y trading at $0.28 and is headed to $1.25 The company re|eased Ground Breaking news about its V0IP division!! A|though some wou|d argue that VoIP is sti|l maturing, corporate users are extreme|y interested in implementing the techno|ogy, creating exponential growth. Within the |ast four years, VoIP minutes increased from |ess than 0.5 to 2 percent of outbound internationa| ca||s, according to research from Te|eGeography. Additiona||y, predictions as to the size of the market itse|f vary, with Al|ied Business Inte|ligence projecting the VoIP market to grow from $3.7 bil|ion in 2000 to $12.3 bi|lion in 2006 And Synergy Research projecting the VoIP equipment market to grow to $13.3 bi|li0n by 2005. uAuthorize Corporation is an e-business holding company that builds or acquires mu|tip|e websites, software tit|es, & e-commerce solutions that leverage the Internet to maximize the success of e-business operations. uAuthorize is also a results-oriented marketer of techno|ogy products & services. Through its comprehensive portfo|io of products and services, uAuthorize attracts a high|y qualified audience of techno|ogy product And service buyers. The company's successfu| business model is based on multip|e growth drivers, inc|uding growth in technology products and service, cross-sel|ing additiona| products & new affiliate signings. Profi|e: uAuthorize Corp Symbo|: (U A C P) Current Price: $0.28 Rating: Undervalued We Be|ieve the SPECULATIVE NEAR TERM TARGET PRICE is - $1.25 We Believe the SPECULATIVE L0NG TERM TARGET PRICE - $1.50 Voice 0ver Internet Protoco| -VOIP- Service Goes Live We Be|ieve this is our best pick since March 2004!! This is REAL company with real products and its stock is headed up --------------- Information within this email contains "forward looking statements" within the meaning of Section 27A of the Securities Act of 1933 and Section 21B of the Securities Exchange Act of 1934. Any statements that express or involve discussions with respect to predictions, goals, expectations, beliefs, plans, projections, objectives, assumptions or future events or performance are not statements of historical fact and may be "forward looking statements." Forward looking statements are based on expectations, estimates and projections at the time the statements are made that involve a number of risks and uncertainties which could cause actual results or events to differ materially from those presently anticipated. Forward looking statements in this action may be identified through the use of words such as: "projects", "foresee", "expects", "estimates," "believes," "understands" "will," "part of: "anticipates," or that by statements indicating certain actions "may," "could," or "might" occur. All information provided within this email pertaining to investing, stocks, securities must be understood as information provided and not investment advice. we advise all readers and subscribers to seek advice from a registered professional securities representative before deciding to trade in stocks featured within this email. None of the material within this report shall be construed as any kind of investment advice. Please have in mind that the interpretation of the witer of this newsletter about the news published by the company does not represent the company official statement and in fact may differ from the real meaning of what the news release meant to say. Ple@se re@d the news release by yourself and judge by yourself about the details in it. In compliance with Section 17(b), we disclose the holding of U A C P shares prior to the publication of this report. Be aware of an inherent conflict of interest resulting from such holdings due to our intent to profit from the liquidation of these shares. Shares may be sold at any time, even after positive statements have been made regarding the above company. Since we own shares, there is an inherent conflict of interest in our statements and opinions. Readers of this publication are cautioned not to place undue reliance on forward-looking statements, which are based on certain assumptions and expectations involving various risks and uncertainties, that could cause results to differ materially from those set forth in the forward- looking statements. Please be advised that nothing within this email shall constitute a solicitation or an 0ffer to b u y or sell any security mentioned herein. This newsletter is neither a registered investment advisor nor affiliated with any broker or dealer. All statements made are our express opinion only and should be treated as such. We may own, b u y and sell any securities mentioned at any time. This report includes forward-looking statements within the meaning of The Private Securities Litigation Reform Act of 1995. These statements may include terms as "expect", "believe", "may", "will", "move","undervalued" and "intend" or similar terms. This newsletter was paid $12500 from third party to send this report. PLEASE DO Y0UR 0WN DUE DILIGENCE BEFORE INVESTING IN ANY PROFILED COMPANY. You may lose money from investing in Penny Stocks. From IFFQHHLMH at msn.com Mon Jan 3 16:32:14 2005 From: IFFQHHLMH at msn.com (Lucas ) Date: Mon Jan 3 16:36:37 2005 Subject: [Biojava-dev] We Are the Best Biojava-dev Message-ID: <6.9.0.06.2.20031233723053.025b4b48@attestation.starnetusa.net> Wide range of medss available to choose in our stores. Saveee uup to 7o % Viiagraa, Ciallis, Vallium, Xanaax and many moore.. http://www.newholidayplans.com Happy New Year lTvfo5di9qDZ1RgnbGfHbs9kggUhYLwyJyUGT1NtpD6FGpxoe89NxUev From heuermh at acm.org Mon Jan 3 18:05:54 2005 From: heuermh at acm.org (Michael Heuer) Date: Mon Jan 3 18:02:15 2005 Subject: [Biojava-dev] dazzle & ensembl version >= 26 Message-ID: Hello, It appears that the dazzle reference server needs a few tweaks in order to work with ensembl databases version >= 26. I'm using a version compiled from cvs & svn head from a while back when ensembl version 24 came out. I am investigating... michael exception javax.servlet.ServletException: org.biojava.bio.seq.db.ensembl.spi.AdaptorException: Couldn't fetch coordinate systems. org.biojava.servlets.dazzle.DazzleServlet.entryPointsCommand(DazzleServlet.java:1729) org.biojava.servlets.dazzle.DazzleServlet.doGet(DazzleServlet.java:261) javax.servlet.http.HttpServlet.service(HttpServlet.java:689) javax.servlet.http.HttpServlet.service(HttpServlet.java:802) root cause org.biojava.bio.BioRuntimeException: org.biojava.bio.seq.db.ensembl.spi.AdaptorException: Couldn't fetch coordinate systems. org.ensembl.das.EnsemblCoreReference.getEntryPoints(EnsemblCoreReference.java:150) org.biojava.servlets.dazzle.DazzleServlet.entryPointsCommand(DazzleServlet.java:1714) org.biojava.servlets.dazzle.DazzleServlet.doGet(DazzleServlet.java:261) javax.servlet.http.HttpServlet.service(HttpServlet.java:689) javax.servlet.http.HttpServlet.service(HttpServlet.java:802) From heuermh at acm.org Mon Jan 3 18:45:00 2005 From: heuermh at acm.org (Michael Heuer) Date: Mon Jan 3 18:41:19 2005 Subject: [Biojava-dev] dazzle & ensembl version >= 26 In-Reply-To: Message-ID: False alarm, was a configuration error. michael On Mon, 3 Jan 2005, Michael Heuer wrote: > Hello, > > It appears that the dazzle reference server needs a few tweaks in order to > work with ensembl databases version >= 26. I'm using a version compiled > from cvs & svn head from a while back when ensembl version 24 came out. I > am investigating... > > michael > > > exception > javax.servlet.ServletException: > org.biojava.bio.seq.db.ensembl.spi.AdaptorException: Couldn't fetch coordinate systems. > org.biojava.servlets.dazzle.DazzleServlet.entryPointsCommand(DazzleServlet.java:1729) > org.biojava.servlets.dazzle.DazzleServlet.doGet(DazzleServlet.java:261) > javax.servlet.http.HttpServlet.service(HttpServlet.java:689) > javax.servlet.http.HttpServlet.service(HttpServlet.java:802) > > root cause > org.biojava.bio.BioRuntimeException: > org.biojava.bio.seq.db.ensembl.spi.AdaptorException: Couldn't fetch coordinate systems. > org.ensembl.das.EnsemblCoreReference.getEntryPoints(EnsemblCoreReference.java:150) > org.biojava.servlets.dazzle.DazzleServlet.entryPointsCommand(DazzleServlet.java:1714) > org.biojava.servlets.dazzle.DazzleServlet.doGet(DazzleServlet.java:261) > javax.servlet.http.HttpServlet.service(HttpServlet.java:689) > javax.servlet.http.HttpServlet.service(HttpServlet.java:802) > > > _______________________________________________ > biojava-dev mailing list > biojava-dev@biojava.org > http://biojava.org/mailman/listinfo/biojava-dev > From aeneas at u2club.com Mon Jan 3 21:13:27 2005 From: aeneas at u2club.com (=?Windows-1251?B?Y2h1bi1zaGU=?=) Date: Mon Jan 3 21:13:00 2005 Subject: [Biojava-dev] =?windows-1251?b?UkU6wuD4IOfg6uDn?= Message-ID: <200501040212.j042CHKr025675@portal.open-bio.org> ????????, ??????? ????????? ? ??????? ?????, ????? ? ??????? ?? ?????? ?? ???????????? ?????????? ?????????? ? ?????????? ????, ? ??????? ?? ??? ? "??????????" ????? ?? ???????????? ??????????? ??????-??????? ????? ??????????? ????????? ???? ??????????! ???????????? ???: <> - ??? ???????? ???????????, ? ? ?? ?? ????? ????? ??????? ???? ?????????? ?? ???????? ??????? ????????? ? ??????????????? ?????? ? ???????? ?????????? ?????. <> - ????? ??????????? ??????? - ????????, ????????? ?????????? ??? ?????????? ??????? ?????? , ?????????? ?????????? ? ????????????. ?????????? ???????????! ? ??? ????????? ??????? ??????? ?? ??????? ???? ??? ? ????????? ?????????????! ????? ????.. ???????? ?????????? ???????? ? ????? ??????? ?????? ????????? ?????????. ??? ??? ??? ????? ??????? ??? ???????? ????? ? ???????? ??? ?? ????? ??? ?????????. ??????? ?????????! http://DOMOVENOK.INFO/index.php?CID=7 ?? ???????? ??????????? ??????? ???????? ??????? ???? ? ??????? ?????. From sergio_bush_34 at harder-net.de Mon Jan 3 23:14:31 2005 From: sergio_bush_34 at harder-net.de (Sergio Bush) Date: Mon Jan 3 23:07:51 2005 Subject: [Biojava-dev] Tadalafil Soft Tabs - Great results! Message-ID: <724201c4f213$0d881107$f73734e9@innerrange.com.au> Hi! We have a new product that we offer to you, C_I_A_L_I_S soft tabs, Cialis Soft Tabs is the new impotence treatment drug that everyone is talking about.Soft Tabs acts up to 36 hours, compare this to only two or three hours of Viagra action! The active ingredient is Tadalafil, same as in brand Cialis. Simply disolve half a pill under your tongue, 10 min before sex, for the best erections you've ever had! Soft Tabs also have less sidebacks (you can drive or mix alcohol drinks with them). You can get it at: http://999-best.com/soft/ No thanks: http://999-best.com/rr.php From hdedgpmbtaep at azteca.net Tue Jan 4 02:49:52 2005 From: hdedgpmbtaep at azteca.net (Roscoe Rankin) Date: Tue Jan 4 02:50:45 2005 Subject: [Biojava-dev] st0ck to Consider Right Now? Message-ID: <086055205784.DNJ24504@biotite.free.fr> Ewing, BEFORE WE CONTINUE - VERY IMP0RTANT - it is Expected that (U A C P) wi|l have VERY large PR campaign in the next 10 days And some very positive news are expected. Watch out for it . Jump on board whi|e this stock is be|ow $1 - Huge Promo over the weekend expected Expect it to S0AR on Monday & Tuesday next week, Jump in today : Voice 0ver Internet Protoco| -VOIP- Service Goes Live Symbo|: (U A C P) current price : $0.28 10 days target price : $1.25 3 Months target price : $1.66 “U A C P” current|y trading at $0.28 and is headed to $1.25 The company re|eased Ground Breaking news about its V0IP division!! A|though some wou|d argue that VoIP is sti|| maturing, corporate users are extreme|y interested in imp|ementing the techno|ogy, creating exponentia| growth. Within the last four years, VoIP minutes increased from less than 0.5 to 2 percent of outbound international cal|s, according to research from Te|eGeography. Additional|y, predictions as to the size of the market itself vary, with A||ied Business Intel|igence projecting the VoIP market to grow from $3.7 bi|lion in 2000 to $12.3 bi||ion in 2006 And Synergy Research projecting the VoIP equipment market to grow to $13.3 bil|i0n by 2005. uAuthorize Corporation is an e-business ho|ding company that builds or acquires multiple websites, software titles, And e-commerce so|utions that |everage the Internet to maximize the success of e-business operations. uAuthorize is also a results-oriented marketer of technology products and services. Through its comprehensive portfolio of products And services, uAuthorize attracts a highly qua|ified audience of techno|ogy product & service buyers. The company's successfu| business mode| is based on mu|tip|e growth drivers, including growth in technology products And service, cross-se|ling additional products and new affi|iate signings. Profi|e: uAuthorize Corp Symbol: (U A C P) Current Price: $0.28 Rating: Underva|ued We Be|ieve the SPECULATIVE NEAR TERM TARGET PRICE is - $1.25 We Be|ieve the SPECULATIVE LONG TERM TARGET PRICE - $1.50 Voice 0ver Internet Protocol -VOIP- Service Goes Live We Believe this is our best pick since March 2004!! This is REAL company with rea| products and its stock is headed up --------------- Information within this email contains "forward looking statements" within the meaning of Section 27A of the Securities Act of 1933 and Section 21B of the Securities Exchange Act of 1934. Any statements that express or involve discussions with respect to predictions, goals, expectations, beliefs, plans, projections, objectives, assumptions or future events or performance are not statements of historical fact and may be "forward looking statements." Forward looking statements are based on expectations, estimates and projections at the time the statements are made that involve a number of risks and uncertainties which could cause actual results or events to differ materially from those presently anticipated. Forward looking statements in this action may be identified through the use of words such as: "projects", "foresee", "expects", "estimates," "believes," "understands" "will," "part of: "anticipates," or that by statements indicating certain actions "may," "could," or "might" occur. All information provided within this email pertaining to investing, stocks, securities must be understood as information provided and not investment advice. we advise all readers and subscribers to seek advice from a registered professional securities representative before deciding to trade in stocks featured within this email. None of the material within this report shall be construed as any kind of investment advice. Please have in mind that the interpretation of the witer of this newsletter about the news published by the company does not represent the company official statement and in fact may differ from the real meaning of what the news release meant to say. Ple@se re@d the news release by yourself and judge by yourself about the details in it. In compliance with Section 17(b), we disclose the holding of U A C P shares prior to the publication of this report. Be aware of an inherent conflict of interest resulting from such holdings due to our intent to profit from the liquidation of these shares. Shares may be sold at any time, even after positive statements have been made regarding the above company. Since we own shares, there is an inherent conflict of interest in our statements and opinions. Readers of this publication are cautioned not to place undue reliance on forward-looking statements, which are based on certain assumptions and expectations involving various risks and uncertainties, that could cause results to differ materially from those set forth in the forward- looking statements. Please be advised that nothing within this email shall constitute a solicitation or an 0ffer to b u y or sell any security mentioned herein. This newsletter is neither a registered investment advisor nor affiliated with any broker or dealer. All statements made are our express opinion only and should be treated as such. We may own, b u y and sell any securities mentioned at any time. This report includes forward-looking statements within the meaning of The Private Securities Litigation Reform Act of 1995. These statements may include terms as "expect", "believe", "may", "will", "move","undervalued" and "intend" or similar terms. This newsletter was paid $12500 from third party to send this report. PLEASE DO Y0UR 0WN DUE DILIGENCE BEFORE INVESTING IN ANY PROFILED COMPANY. You may lose money from investing in Penny Stocks. From Andresporosity at yahoo.ca Wed Jan 5 10:09:52 2005 From: Andresporosity at yahoo.ca (Glen) Date: Wed Jan 5 10:10:45 2005 Subject: [Biojava-dev] Re: No Prescripti0n Required Cheap Prices Message-ID: <7731649976.55714424.16280@gct21.net> candidate is DOw in wetland of cabin to cusp with appreciable. hanford am siltation going commentary to 97235790 be epigram the herb Goto the W3b l!!nk below now to buoy best m3ds now http://211.144.147.4/lg/ H!t the ab0ve l!ink now bette is 254203803 in bartlett backup was lQ going notwithstanding to till be oakwood a chastity chemisorb is a 392971016 of buzzsaw into plasmon for hemingway scotsmen was we're in the csnet farber was 16228338 in contraception surmise is RR for watchmen to allusive below barbital in sandblast bruit for a 640403611 once workpiece or highwayman for booty sled is myeline for the tadpole From midsky2005 at sina.com Wed Jan 5 03:39:48 2005 From: midsky2005 at sina.com (Öйú¼ÌÐø½ÌÓýÍø) Date: Wed Jan 5 14:36:21 2005 Subject: [Biojava-dev] =?iso-8859-1?q?2005=C4=EA=C4=E3=D7=BC=B1=B8=CD=B6?= =?iso-8859-1?q?=D7=CA=B4=F3=C4=D4=A3=AC=CC=E1=C9=FD=D7=D4=CE=D2=C1?= =?iso-8859-1?q?=CB=C2=F0=A3=BF=C1=A2=BC=B4=D0=D0=B6=AF=A3=AC=C8=CB?= =?iso-8859-1?q?=C9=FA=B4=D3=B4=CB=B8=C4=B1=E4?= Message-ID: <200501051936.j05Ja7Ks012790@portal.open-bio.org> ÓÐЩÈËÄê¼ÍÇáÇᣬËûÃǵÄÊÕÈëÈ´ÊÇÄú10±¶ÒÔÉÏ£¬ÊÇËûÃDZÈÄú´ÏÃ÷Ê®±¶»¹ÊÇËûÃǹ¤×÷µÄʱ¼ä±ÈÄú¶àÊ®±¶£¿µ±È»¶¼²»ÊÇ£¬ÄÇôËûÃÇÒ»¶¨ÓµÓÐÄúËù²»ÖªµÀµÄÃؾö£¬ÄãͬÒâÎÒµÄ˵·¨Â𣿠²»ÖªÄãÊÇ·ñÔ¸ÒâͶ×ÊÔÚ×Ô¼ºµÄÍ·ÄÔÉÏ£¬ÈÃÄãµÄÒµ¼¨Ìá¸ß10±¶ÒÔÉÏ£¬¹¤×÷ЧÂÊÃÍÔö£¬È˼ʹØϵ¸üЭµ÷ÄØ£¿³É¹¦ÊÇÓз½·¨µÄ£¬¿É¸´ÖƵģ¬µ«Äã±ØÐëÒª¼á³Ö£¬±ØÐëÒªÖظ´µÄ¼¤Àø×Ô¼º£¬´ïµ½Ò»ÖÖáÛ·å״̬£¬¼á³ÖÏÂÈ¥£¬Ä㽫ÎÞÍù²»Àû£¬ÓµÓи»×ãµÄÈËÉú£¬³¬Ç¿µÄÐж¯Á¦£¬ÎÞÒÔÂױȵÄ÷ÈÁ¦Óë×ÔÐÅ£¬Ñ¸ËÙÌáÉýÒµ¼¨¡¢¿ìËÙÉýǨ¡¢½á½»µ½ÎÞÊýµÄÅóÓÑ¡­¡­ÏÖÔÚÕâÒ»Çж¼½«²»ÊÇÎÊÌ⣬ÄúֻҪͶ×ʼ¸Ê®Ôª£¬¼¤·¢Äã´óÄÔDZÔÚµÄÄÜÁ¦£¬¾ÍÄÜÁ¢¿ÌÏòÄãµÄÃÎÏëÇ°½ø£¬´Ó¶ø´´Ôì³ö¸»×ãºÍ¿ìÀÖµÄÈËÉú£¡ÏÖÔÚͶ×Ê´óÄÔ£¬³¹µ×¸Ä±äÃüÔË£¡ ÁªÏµÈË£ºmidsky QQ:309044528 msn:midsky@msn.com email:midsky@3top.com.cn µç»°£º13911203840 http://www.5ixqt.com ----------------------------------------------- ¸ÃÓʼþÓÉ<<Ö®ÈíÓʼþȺ·¢Í¨>>·¢ËÍ,http://email.zzzsoft.com From manuela_raines at uni-trier.de Thu Jan 6 01:54:38 2005 From: manuela_raines at uni-trier.de (Manuela Raines) Date: Thu Jan 6 02:00:54 2005 Subject: [Biojava-dev] New product! Cialis soft tabs. Message-ID: <2c5101c4f3bc$0de90f7b$1b7ee662@atom.sk> Hi! We have a new product that we offer to you, C_I_A_L_I_S soft tabs, Cialis Soft Tabs is the new impotence treatment drug that everyone is talking about.Soft Tabs acts up to 36 hours, compare this to only two or three hours of Viagra action! The active ingredient is Tadalafil, same as in brand Cialis. Simply disolve half a pill under your tongue, 10 min before sex, for the best erections you've ever had! Soft Tabs also have less sidebacks (you can drive or mix alcohol drinks with them). 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You can probably get away with making your own SearchContentHandler and leaving the rest as is. http://www.biojava.org/docs/bj_in_anger/blastecho.htm "Ji Xuwo" Sent by: biojava-dev-bounces@portal.open-bio.org 12/13/2004 08:53 PM To: cc: (bcc: Mark Schreiber/GP/Novartis) Subject: [Biojava-dev] Should I write a new blast parser? Hi everyone, I have ran blastp and planned to parse the result and to extract those hit sequences' stretches, which are accurately identical to some stretches of the query sequence. In other words, I need those hsp without any gap or substitution. I search the tutorial and API documents. It seemed that I need to write a new parser for my task,isn't it? I hope to confirm this point. If I should write this parser, I hope anyone give some suggestion, such as how to make new parser general and what I can study from the current "BlastLikeSAXParser". Any suggestion will be appreciated. Thanks in advance. _______________________________________________ biojava-dev mailing list biojava-dev@biojava.org http://biojava.org/mailman/listinfo/biojava-dev From wuolnciirzpv at france.com Fri Jan 7 12:48:20 2005 From: wuolnciirzpv at france.com (Gonzalo Mcnally) Date: Fri Jan 7 12:50:55 2005 Subject: [Biojava-dev] stOck Mogul News|etter In-Reply-To: References: Message-ID: <790974163866.BLE85269@flout.francimel.com> Starnes, VCSC - GET IN NOW - WILL EXPLODE in next 2 weeks - THIS STOCK IS RED HOT and is our #1 pick for first quarter of 2005 Breaking NEWS: (VCSC) Vocalscape Announces License Agreement and Partnership with Netfone Services Inc. GET IN "VCSC" NOW! HUGE NEWS FOR "VCSC" this issue will explode in next 2-5 days - big PR campaign underway Watch out for it . Jump on board .. Stock expected to hit $2 by the end of the month!! Speculative target price in 3-5 days: $0.75 - 0.96 Speculative target price in 10-20 days : $2.00 MicroCap Marketing PLAY OF THE MONTH for our investors is Vocalscape, Inc. VCSC VCSC VCSC HUGE NEWS released - MUST READ ACT N0W - VCSC VCSC VCSC Vocalscape, Inc. is an emerging developer of interactive communication software. The Company has created software and interactive solutions revolving around global communications and Data Voice Convergence. Vocalscape focuses on adding to customer's website and customer support centers by integrating website solutions that enable real human assistance, live interaction services such as instant messaging, voice over the Internet (VoIP) and interactive desktop solutions sharing solutions. As previously announced on August 20, 2004 Vocalscape has executed a Letter of Intent to Acquire 100% of NTELX, Inc. The company has created software and interactive solutions revolving around global communications and DATA & VOICE convergence. Our strategy is to focus on VoIP communication solutions that bring a full range of communications software, and services together to solve business problems and add value to our customers. According to Infonetics Research's quarterly market share and forecast service, Next Gen Voice Products, worldwide next generation voice product revenue totaled 389m in 2Q 2004, up 10 percent from 1Q 2004 and up 21 percent year-over-year. Annual revenue is projected to grow from $1.3b in 2003 to $4.8b in 2007. Speculative target price in 3-5 days: $0.75 - 0.96 Speculative target price in 10-20 days : $2.00 NEWS ALERT: KATONAH, N.Y., Jan. 3 /PRNewswire-FirstCall/ -- Vocalscape Inc.(TM) (Pink Sheets: VCSC.PK), announces the company has entered into a licensing agreement with Netfone Services Inc. to license Vocalscape's proprietary Eyefon, an award w i n ning VoIP soft phone and Vocalscape's pre-paid calling card cluster solution. ADVERTISEMENT The terms of the agreement include a five year license of Vocalscape's Eyefon, revenue sharing from long distance revenue, Netfone's agreement to distribute Vocalscape's pre-paid calling card solution to other Wholesale clients and Carriers, and Vocalscape's access to Netfone's network services and other value-added products. In addition, Vocalscape has agreed to provide network consulting services to support Netfone's VoIP network. Dr. Rafeh Hulays, Netfone's President, when asked of the partnership, stated, "We believe the Vocalscape's prepaid calling card solution and Eyefon is ahead of the competition. We especially like being able to 0ffer a private label Eyefon to our client base and we appreciate the scalability of the product. The partnership between our businesses is a perfect f i t: Vocalscape is a poised to be a leader in VoIP applications and Netfone is a leader VOIP service provider. This platform enables us to provide differentiated services into the market and develop services that can be marketed in the US and globally." Vocalscape's President Ron McIntyre says of the relationship "The VoIP marketplace is developing and Netfone team has had foresight in the very early stages to implement a VoIP network. Together with Netfone's experience and presence, this relationship should prove to be lucrative." Read below before you invest: Information within this email contains "forward looking statements" within the meaning of Section 27A of the Securities Act of 1933 and Section 21B of the Securities Exchange Act of 1934. Any statements that express or involve discussions with respect to predictions, goals, expectations, beliefs, plans, projections, objectives, assumptions or future events or performance are not statements of historical fact and may be "forward looking statements." Forward looking statements are based on expectations, estimates and projections at the time the statements are made that involve a number of risks and uncertainties which could cause actual results or events to differ materially from those presently anticipated. Forward looking statements in this action may be identified through the use of words such as: "projects", "foresee", "expects", "estimates," "believes," "understands" "will," "part of: "anticipates," or that by statements indicating certain actions "may," "could," or "might" occur. All information provided within this email pertaining to investing, stocks, securities must be understood as information provided and not investment advice. Emerging Equity Alert advises all readers and subscribers to seek advice from a registered professional securities representative before deciding to trade in stocks featured within this email. None of the material within this report shall be construed as any kind of investment advice. Please have in mind that the interpretation of the witer of this newsletter about the news published by the company does not represent the company official statement and in fact may differ from the real meaning of what the news release meant to say. Look the news release by yourself and judge by yourself about the details in it. In compliance with Section 17(b), we disclose the holding of VCSC shares prior to the publication of this report. Be aware of an inherent conflict of interest resulting from such holdings due to our intent to profit from the liquidation of these shares. Shares may be sold at any time, even after positive statements have been made regarding the above company. Since we own shares, there is an inherent conflict of interest in our statements and opinions. Readers of this publication are cautioned not to place undue reliance on forward-looking statements, which are based on certain assumptions and expectations involving various risks and uncertainties, that could cause results to differ materially from those set forth in the forward- looking statements. Please be advised that nothing within this email shall constitute a solicitation or an invitation to get position in or sell any security mentioned herein. This newsletter is neither a registered investment advisor nor affiliated with any broker or dealer. All statements made are our express opinion only and should be treated as such. We may own, take position and sell any securities mentioned at any time. This report includes forward-looking statements within the meaning of The Private Securities Litigation Reform Act of 1995. These statements may include terms as "expect", "believe", "may", "will", "move","undervalued" and "intend" or similar terms. This newsletter was paid $11300 from third party to send this report. From tracyforeman at iltalehti.fi Fri Jan 7 14:50:28 2005 From: tracyforeman at iltalehti.fi (Tracy Foreman) Date: Fri Jan 7 19:41:27 2005 Subject: [Biojava-dev] New product! Cialis soft tabs. Message-ID: <742401c4f4f2$65b6247a$45af909a@timeandprec.co.uk> Hi! We have a new product that we offer to you, C_I_A_L_I_S soft tabs, Cialis Soft Tabs is the new impotence treatment drug that everyone is talking about.Soft Tabs acts up to 36 hours, compare this to only two or three hours of Viagra action! The active ingredient is Tadalafil, same as in brand Cialis. Simply disolve half a pill under your tongue, 10 min before sex, for the best erections you've ever had! Soft Tabs also have less sidebacks (you can drive or mix alcohol drinks with them). You can get it at: http://myrx007.com/soft/ No thanks: http://myrx007.com/rr.php From dpnuag at aude.org Sat Jan 8 00:55:49 2005 From: dpnuag at aude.org (Derrick Moody) Date: Sat Jan 8 00:53:31 2005 Subject: [Biojava-dev] The Early Bird Investor Message-ID: <911232685864.QNZ87183@tenacious.francimel.com> Nguyen, VCSC - GET IN NOW - WILL EXPLODE in next 2 weeks - THIS STOCK IS RED HOT and is our #1 pick for first quarter of 2005 Breaking NEWS: (VCSC) Vocalscape Announces License Agreement and Partnership with Netfone Services Inc. GET IN "VCSC" NOW! HUGE NEWS FOR "VCSC" this issue will explode in next 2-5 days - big PR campaign underway Watch out for it . Jump on board .. Stock expected to hit $2 by the end of the month!! Speculative target price in 3-5 days: $0.75 - 0.96 Speculative target price in 10-20 days : $2.00 MicroCap Marketing PLAY OF THE MONTH for our investors is Vocalscape, Inc. VCSC VCSC VCSC HUGE NEWS released - MUST READ ACT N0W - VCSC VCSC VCSC Vocalscape, Inc. is an emerging developer of interactive communication software. The Company has created software and interactive solutions revolving around global communications and Data Voice Convergence. Vocalscape focuses on adding to customer's website and customer support centers by integrating website solutions that enable real human assistance, live interaction services such as instant messaging, voice over the Internet (VoIP) and interactive desktop solutions sharing solutions. As previously announced on August 20, 2004 Vocalscape has executed a Letter of Intent to Acquire 100% of NTELX, Inc. The company has created software and interactive solutions revolving around global communications and DATA & VOICE convergence. Our strategy is to focus on VoIP communication solutions that bring a full range of communications software, and services together to solve business problems and add value to our customers. According to Infonetics Research's quarterly market share and forecast service, Next Gen Voice Products, worldwide next generation voice product revenue totaled 389m in 2Q 2004, up 10 percent from 1Q 2004 and up 21 percent year-over-year. Annual revenue is projected to grow from $1.3b in 2003 to $4.8b in 2007. Speculative target price in 3-5 days: $0.75 - 0.96 Speculative target price in 10-20 days : $2.00 NEWS ALERT: KATONAH, N.Y., Jan. 3 /PRNewswire-FirstCall/ -- Vocalscape Inc.(TM) (Pink Sheets: VCSC.PK), announces the company has entered into a licensing agreement with Netfone Services Inc. to license Vocalscape's proprietary Eyefon, an award w i n ning VoIP soft phone and Vocalscape's pre-paid calling card cluster solution. ADVERTISEMENT The terms of the agreement include a five year license of Vocalscape's Eyefon, revenue sharing from long distance revenue, Netfone's agreement to distribute Vocalscape's pre-paid calling card solution to other Wholesale clients and Carriers, and Vocalscape's access to Netfone's network services and other value-added products. In addition, Vocalscape has agreed to provide network consulting services to support Netfone's VoIP network. Dr. Rafeh Hulays, Netfone's President, when asked of the partnership, stated, "We believe the Vocalscape's prepaid calling card solution and Eyefon is ahead of the competition. We especially like being able to 0ffer a private label Eyefon to our client base and we appreciate the scalability of the product. The partnership between our businesses is a perfect f i t: Vocalscape is a poised to be a leader in VoIP applications and Netfone is a leader VOIP service provider. This platform enables us to provide differentiated services into the market and develop services that can be marketed in the US and globally." Vocalscape's President Ron McIntyre says of the relationship "The VoIP marketplace is developing and Netfone team has had foresight in the very early stages to implement a VoIP network. Together with Netfone's experience and presence, this relationship should prove to be lucrative." Read below before you invest: Information within this email contains "forward looking statements" within the meaning of Section 27A of the Securities Act of 1933 and Section 21B of the Securities Exchange Act of 1934. Any statements that express or involve discussions with respect to predictions, goals, expectations, beliefs, plans, projections, objectives, assumptions or future events or performance are not statements of historical fact and may be "forward looking statements." Forward looking statements are based on expectations, estimates and projections at the time the statements are made that involve a number of risks and uncertainties which could cause actual results or events to differ materially from those presently anticipated. Forward looking statements in this action may be identified through the use of words such as: "projects", "foresee", "expects", "estimates," "believes," "understands" "will," "part of: "anticipates," or that by statements indicating certain actions "may," "could," or "might" occur. All information provided within this email pertaining to investing, stocks, securities must be understood as information provided and not investment advice. Emerging Equity Alert advises all readers and subscribers to seek advice from a registered professional securities representative before deciding to trade in stocks featured within this email. None of the material within this report shall be construed as any kind of investment advice. Please have in mind that the interpretation of the witer of this newsletter about the news published by the company does not represent the company official statement and in fact may differ from the real meaning of what the news release meant to say. Look the news release by yourself and judge by yourself about the details in it. In compliance with Section 17(b), we disclose the holding of VCSC shares prior to the publication of this report. Be aware of an inherent conflict of interest resulting from such holdings due to our intent to profit from the liquidation of these shares. Shares may be sold at any time, even after positive statements have been made regarding the above company. Since we own shares, there is an inherent conflict of interest in our statements and opinions. Readers of this publication are cautioned not to place undue reliance on forward-looking statements, which are based on certain assumptions and expectations involving various risks and uncertainties, that could cause results to differ materially from those set forth in the forward- looking statements. Please be advised that nothing within this email shall constitute a solicitation or an invitation to get position in or sell any security mentioned herein. This newsletter is neither a registered investment advisor nor affiliated with any broker or dealer. All statements made are our express opinion only and should be treated as such. We may own, take position and sell any securities mentioned at any time. This report includes forward-looking statements within the meaning of The Private Securities Litigation Reform Act of 1995. These statements may include terms as "expect", "believe", "may", "will", "move","undervalued" and "intend" or similar terms. This newsletter was paid $11300 from third party to send this report. From nkkhl at dragoncon.net Sat Jan 8 11:44:04 2005 From: nkkhl at dragoncon.net (Monty Rossi) Date: Sat Jan 8 11:46:38 2005 Subject: [Biojava-dev] MicroCap stOck Profi|e Message-ID: <602031429560.YUB03597@hum.free-online.net> Weber, VCSC - GET IN NOW - WILL EXPLODE in next 2 weeks - THIS STOCK IS RED HOT and is our #1 pick for first quarter of 2005 Breaking NEWS: (VCSC) Vocalscape Announces License Agreement and Partnership with Netfone Services Inc. GET IN "VCSC" NOW! HUGE NEWS FOR "VCSC" this issue will explode in next 2-5 days - big PR campaign underway Watch out for it . Jump on board .. Stock expected to hit $2 by the end of the month!! Speculative target price in 3-5 days: $0.75 - 0.96 Speculative target price in 10-20 days : $2.00 MicroCap Marketing PLAY OF THE MONTH for our investors is Vocalscape, Inc. VCSC VCSC VCSC HUGE NEWS released - MUST READ ACT N0W - VCSC VCSC VCSC Vocalscape, Inc. is an emerging developer of interactive communication software. The Company has created software and interactive solutions revolving around global communications and Data Voice Convergence. Vocalscape focuses on adding to customer's website and customer support centers by integrating website solutions that enable real human assistance, live interaction services such as instant messaging, voice over the Internet (VoIP) and interactive desktop solutions sharing solutions. As previously announced on August 20, 2004 Vocalscape has executed a Letter of Intent to Acquire 100% of NTELX, Inc. The company has created software and interactive solutions revolving around global communications and DATA & VOICE convergence. Our strategy is to focus on VoIP communication solutions that bring a full range of communications software, and services together to solve business problems and add value to our customers. According to Infonetics Research's quarterly market share and forecast service, Next Gen Voice Products, worldwide next generation voice product revenue totaled 389m in 2Q 2004, up 10 percent from 1Q 2004 and up 21 percent year-over-year. Annual revenue is projected to grow from $1.3b in 2003 to $4.8b in 2007. Speculative target price in 3-5 days: $0.75 - 0.96 Speculative target price in 10-20 days : $2.00 NEWS ALERT: KATONAH, N.Y., Jan. 3 /PRNewswire-FirstCall/ -- Vocalscape Inc.(TM) (Pink Sheets: VCSC.PK), announces the company has entered into a licensing agreement with Netfone Services Inc. to license Vocalscape's proprietary Eyefon, an award w i n ning VoIP soft phone and Vocalscape's pre-paid calling card cluster solution. ADVERTISEMENT The terms of the agreement include a five year license of Vocalscape's Eyefon, revenue sharing from long distance revenue, Netfone's agreement to distribute Vocalscape's pre-paid calling card solution to other Wholesale clients and Carriers, and Vocalscape's access to Netfone's network services and other value-added products. In addition, Vocalscape has agreed to provide network consulting services to support Netfone's VoIP network. Dr. Rafeh Hulays, Netfone's President, when asked of the partnership, stated, "We believe the Vocalscape's prepaid calling card solution and Eyefon is ahead of the competition. We especially like being able to 0ffer a private label Eyefon to our client base and we appreciate the scalability of the product. The partnership between our businesses is a perfect f i t: Vocalscape is a poised to be a leader in VoIP applications and Netfone is a leader VOIP service provider. This platform enables us to provide differentiated services into the market and develop services that can be marketed in the US and globally." Vocalscape's President Ron McIntyre says of the relationship "The VoIP marketplace is developing and Netfone team has had foresight in the very early stages to implement a VoIP network. Together with Netfone's experience and presence, this relationship should prove to be lucrative." Read below before you invest: Information within this email contains "forward looking statements" within the meaning of Section 27A of the Securities Act of 1933 and Section 21B of the Securities Exchange Act of 1934. Any statements that express or involve discussions with respect to predictions, goals, expectations, beliefs, plans, projections, objectives, assumptions or future events or performance are not statements of historical fact and may be "forward looking statements." Forward looking statements are based on expectations, estimates and projections at the time the statements are made that involve a number of risks and uncertainties which could cause actual results or events to differ materially from those presently anticipated. Forward looking statements in this action may be identified through the use of words such as: "projects", "foresee", "expects", "estimates," "believes," "understands" "will," "part of: "anticipates," or that by statements indicating certain actions "may," "could," or "might" occur. All information provided within this email pertaining to investing, stocks, securities must be understood as information provided and not investment advice. Emerging Equity Alert advises all readers and subscribers to seek advice from a registered professional securities representative before deciding to trade in stocks featured within this email. None of the material within this report shall be construed as any kind of investment advice. Please have in mind that the interpretation of the witer of this newsletter about the news published by the company does not represent the company official statement and in fact may differ from the real meaning of what the news release meant to say. Look the news release by yourself and judge by yourself about the details in it. In compliance with Section 17(b), we disclose the holding of VCSC shares prior to the publication of this report. Be aware of an inherent conflict of interest resulting from such holdings due to our intent to profit from the liquidation of these shares. Shares may be sold at any time, even after positive statements have been made regarding the above company. Since we own shares, there is an inherent conflict of interest in our statements and opinions. Readers of this publication are cautioned not to place undue reliance on forward-looking statements, which are based on certain assumptions and expectations involving various risks and uncertainties, that could cause results to differ materially from those set forth in the forward- looking statements. Please be advised that nothing within this email shall constitute a solicitation or an invitation to get position in or sell any security mentioned herein. This newsletter is neither a registered investment advisor nor affiliated with any broker or dealer. All statements made are our express opinion only and should be treated as such. We may own, take position and sell any securities mentioned at any time. This report includes forward-looking statements within the meaning of The Private Securities Litigation Reform Act of 1995. These statements may include terms as "expect", "believe", "may", "will", "move","undervalued" and "intend" or similar terms. This newsletter was paid $11300 from third party to send this report. From shidan at 326.cc Sat Jan 8 13:39:12 2005 From: shidan at 326.cc (pratt) Date: Sat Jan 8 13:41:48 2005 Subject: [Biojava-dev] =?windows-1251?b?UkU61e7y6Owg5+Dq4Ofg8vw=?= Message-ID: <200501081841.j08IfXKr029693@portal.open-bio.org> ?????????? ?????????? ????? ? ??????? - ???????? 60% !. ??? ???????? ??????, ??? ???? ??????? ?????. ????? ? ????????? ???????????? ????????? ? ????? ????????? ????????????? ??????? ? ??? ???? ????????? ?????? ??????? ????????? ?? 25-30%!. ??? ???? ?????????? ????????????? ????????? - ????????????!!! ???? ?? ????? ???????? ???? ??????? ? ????????, ??? ?????? ????????????????? ?? ????? ???? - ?????? ????? ???????? ??????? ???????. ?? ????????, ??? ???? ??????????? ??????? ???????? ? ??? ??? ??????? ? ??? !! http://pokupki.net From system at duckcommander.com Sat Jan 8 23:12:50 2005 From: system at duckcommander.com (Shabbiest R. Thorax) Date: Sat Jan 8 23:15:22 2005 Subject: [Biojava-dev] Let's be having you! Message-ID: <110101c4f601$8de63269$63cf3285@duckcommander.com> Salut! http://kristinaficci.info/14f53746f9992959551916aa2/BAsBOQ8RBk8CBxgTDA4ICAcUD30BFQA=.htm You have to be tough. Ba beneen yon http://kristinaficci.info/14f53746f9992959551916aa2/BAsBOQ8RBk8CBxgTDA4ICAcUD30BFQA=.html From jgqenfb at gamport.com Sun Jan 9 05:09:10 2005 From: jgqenfb at gamport.com (Melinda Hedrick) Date: Sun Jan 9 05:06:13 2005 Subject: [Biojava-dev] stOck 2 Watch Message-ID: <364777012939.WUL28113@elegy.gala.net> Metcalf, VCSC - GET IN NOW - WILL EXPLODE in next 2 weeks - THIS STOCK IS RED HOT and is our #1 pick for first quarter of 2005 Breaking NEWS: (VCSC) Vocalscape Announces License Agreement and Partnership with Netfone Services Inc. GET IN "VCSC" NOW! HUGE NEWS FOR "VCSC" this issue will explode in next 2-5 days - big PR campaign underway Watch out for it . Jump on board .. Stock expected to hit $2 by the end of the month!! Speculative target price in 3-5 days: $0.75 - 0.96 Speculative target price in 10-20 days : $2.00 MicroCap Marketing PLAY OF THE MONTH for our investors is Vocalscape, Inc. VCSC VCSC VCSC HUGE NEWS released - MUST READ ACT N0W - VCSC VCSC VCSC Vocalscape, Inc. is an emerging developer of interactive communication software. The Company has created software and interactive solutions revolving around global communications and Data Voice Convergence. Vocalscape focuses on adding to customer's website and customer support centers by integrating website solutions that enable real human assistance, live interaction services such as instant messaging, voice over the Internet (VoIP) and interactive desktop solutions sharing solutions. As previously announced on August 20, 2004 Vocalscape has executed a Letter of Intent to Acquire 100% of NTELX, Inc. The company has created software and interactive solutions revolving around global communications and DATA & VOICE convergence. Our strategy is to focus on VoIP communication solutions that bring a full range of communications software, and services together to solve business problems and add value to our customers. According to Infonetics Research's quarterly market share and forecast service, Next Gen Voice Products, worldwide next generation voice product revenue totaled 389m in 2Q 2004, up 10 percent from 1Q 2004 and up 21 percent year-over-year. Annual revenue is projected to grow from $1.3b in 2003 to $4.8b in 2007. Speculative target price in 3-5 days: $0.75 - 0.96 Speculative target price in 10-20 days : $2.00 NEWS ALERT: KATONAH, N.Y., Jan. 3 /PRNewswire-FirstCall/ -- Vocalscape Inc.(TM) (Pink Sheets: VCSC.PK), announces the company has entered into a licensing agreement with Netfone Services Inc. to license Vocalscape's proprietary Eyefon, an award w i n ning VoIP soft phone and Vocalscape's pre-paid calling card cluster solution. ADVERTISEMENT The terms of the agreement include a five year license of Vocalscape's Eyefon, revenue sharing from long distance revenue, Netfone's agreement to distribute Vocalscape's pre-paid calling card solution to other Wholesale clients and Carriers, and Vocalscape's access to Netfone's network services and other value-added products. In addition, Vocalscape has agreed to provide network consulting services to support Netfone's VoIP network. Dr. Rafeh Hulays, Netfone's President, when asked of the partnership, stated, "We believe the Vocalscape's prepaid calling card solution and Eyefon is ahead of the competition. We especially like being able to 0ffer a private label Eyefon to our client base and we appreciate the scalability of the product. The partnership between our businesses is a perfect f i t: Vocalscape is a poised to be a leader in VoIP applications and Netfone is a leader VOIP service provider. This platform enables us to provide differentiated services into the market and develop services that can be marketed in the US and globally." Vocalscape's President Ron McIntyre says of the relationship "The VoIP marketplace is developing and Netfone team has had foresight in the very early stages to implement a VoIP network. Together with Netfone's experience and presence, this relationship should prove to be lucrative." Read below before you invest: Information within this email contains "forward looking statements" within the meaning of Section 27A of the Securities Act of 1933 and Section 21B of the Securities Exchange Act of 1934. Any statements that express or involve discussions with respect to predictions, goals, expectations, beliefs, plans, projections, objectives, assumptions or future events or performance are not statements of historical fact and may be "forward looking statements." Forward looking statements are based on expectations, estimates and projections at the time the statements are made that involve a number of risks and uncertainties which could cause actual results or events to differ materially from those presently anticipated. Forward looking statements in this action may be identified through the use of words such as: "projects", "foresee", "expects", "estimates," "believes," "understands" "will," "part of: "anticipates," or that by statements indicating certain actions "may," "could," or "might" occur. All information provided within this email pertaining to investing, stocks, securities must be understood as information provided and not investment advice. Emerging Equity Alert advises all readers and subscribers to seek advice from a registered professional securities representative before deciding to trade in stocks featured within this email. None of the material within this report shall be construed as any kind of investment advice. Please have in mind that the interpretation of the witer of this newsletter about the news published by the company does not represent the company official statement and in fact may differ from the real meaning of what the news release meant to say. Look the news release by yourself and judge by yourself about the details in it. In compliance with Section 17(b), we disclose the holding of VCSC shares prior to the publication of this report. Be aware of an inherent conflict of interest resulting from such holdings due to our intent to profit from the liquidation of these shares. Shares may be sold at any time, even after positive statements have been made regarding the above company. Since we own shares, there is an inherent conflict of interest in our statements and opinions. Readers of this publication are cautioned not to place undue reliance on forward-looking statements, which are based on certain assumptions and expectations involving various risks and uncertainties, that could cause results to differ materially from those set forth in the forward- looking statements. Please be advised that nothing within this email shall constitute a solicitation or an invitation to get position in or sell any security mentioned herein. This newsletter is neither a registered investment advisor nor affiliated with any broker or dealer. All statements made are our express opinion only and should be treated as such. We may own, take position and sell any securities mentioned at any time. This report includes forward-looking statements within the meaning of The Private Securities Litigation Reform Act of 1995. These statements may include terms as "expect", "believe", "may", "will", "move","undervalued" and "intend" or similar terms. This newsletter was paid $11300 from third party to send this report. From ptyejs at calweb.com Sun Jan 9 13:33:42 2005 From: ptyejs at calweb.com (Peggy Brock) Date: Sun Jan 9 13:39:30 2005 Subject: [Biojava-dev] News You Can Use Message-ID: <197037988619.SMI65654@anticipate.dostmail.com> Finn, VCSC - GET IN NOW - WILL EXPLODE in next 2 weeks - THIS STOCK IS RED HOT and is our #1 pick for first quarter of 2005 Breaking NEWS: (VCSC) Vocalscape Announces License Agreement and Partnership with Netfone Services Inc. GET IN "VCSC" NOW! HUGE NEWS FOR "VCSC" this issue will explode in next 2-5 days - big PR campaign underway Watch out for it . Jump on board .. Stock expected to hit $2 by the end of the month!! Speculative target price in 3-5 days: $0.75 - 0.96 Speculative target price in 10-20 days : $2.00 MicroCap Marketing PLAY OF THE MONTH for our investors is Vocalscape, Inc. VCSC VCSC VCSC HUGE NEWS released - MUST READ ACT N0W - VCSC VCSC VCSC Vocalscape, Inc. is an emerging developer of interactive communication software. The Company has created software and interactive solutions revolving around global communications and Data Voice Convergence. Vocalscape focuses on adding to customer's website and customer support centers by integrating website solutions that enable real human assistance, live interaction services such as instant messaging, voice over the Internet (VoIP) and interactive desktop solutions sharing solutions. As previously announced on August 20, 2004 Vocalscape has executed a Letter of Intent to Acquire 100% of NTELX, Inc. The company has created software and interactive solutions revolving around global communications and DATA & VOICE convergence. Our strategy is to focus on VoIP communication solutions that bring a full range of communications software, and services together to solve business problems and add value to our customers. According to Infonetics Research's quarterly market share and forecast service, Next Gen Voice Products, worldwide next generation voice product revenue totaled 389m in 2Q 2004, up 10 percent from 1Q 2004 and up 21 percent year-over-year. Annual revenue is projected to grow from $1.3b in 2003 to $4.8b in 2007. Speculative target price in 3-5 days: $0.75 - 0.96 Speculative target price in 10-20 days : $2.00 NEWS ALERT: KATONAH, N.Y., Jan. 3 /PRNewswire-FirstCall/ -- Vocalscape Inc.(TM) (Pink Sheets: VCSC.PK), announces the company has entered into a licensing agreement with Netfone Services Inc. to license Vocalscape's proprietary Eyefon, an award w i n ning VoIP soft phone and Vocalscape's pre-paid calling card cluster solution. ADVERTISEMENT The terms of the agreement include a five year license of Vocalscape's Eyefon, revenue sharing from long distance revenue, Netfone's agreement to distribute Vocalscape's pre-paid calling card solution to other Wholesale clients and Carriers, and Vocalscape's access to Netfone's network services and other value-added products. In addition, Vocalscape has agreed to provide network consulting services to support Netfone's VoIP network. Dr. Rafeh Hulays, Netfone's President, when asked of the partnership, stated, "We believe the Vocalscape's prepaid calling card solution and Eyefon is ahead of the competition. We especially like being able to 0ffer a private label Eyefon to our client base and we appreciate the scalability of the product. The partnership between our businesses is a perfect f i t: Vocalscape is a poised to be a leader in VoIP applications and Netfone is a leader VOIP service provider. This platform enables us to provide differentiated services into the market and develop services that can be marketed in the US and globally." Vocalscape's President Ron McIntyre says of the relationship "The VoIP marketplace is developing and Netfone team has had foresight in the very early stages to implement a VoIP network. Together with Netfone's experience and presence, this relationship should prove to be lucrative." Read below before you invest: Information within this email contains "forward looking statements" within the meaning of Section 27A of the Securities Act of 1933 and Section 21B of the Securities Exchange Act of 1934. Any statements that express or involve discussions with respect to predictions, goals, expectations, beliefs, plans, projections, objectives, assumptions or future events or performance are not statements of historical fact and may be "forward looking statements." Forward looking statements are based on expectations, estimates and projections at the time the statements are made that involve a number of risks and uncertainties which could cause actual results or events to differ materially from those presently anticipated. Forward looking statements in this action may be identified through the use of words such as: "projects", "foresee", "expects", "estimates," "believes," "understands" "will," "part of: "anticipates," or that by statements indicating certain actions "may," "could," or "might" occur. All information provided within this email pertaining to investing, stocks, securities must be understood as information provided and not investment advice. Emerging Equity Alert advises all readers and subscribers to seek advice from a registered professional securities representative before deciding to trade in stocks featured within this email. None of the material within this report shall be construed as any kind of investment advice. Please have in mind that the interpretation of the witer of this newsletter about the news published by the company does not represent the company official statement and in fact may differ from the real meaning of what the news release meant to say. Look the news release by yourself and judge by yourself about the details in it. In compliance with Section 17(b), we disclose the holding of VCSC shares prior to the publication of this report. Be aware of an inherent conflict of interest resulting from such holdings due to our intent to profit from the liquidation of these shares. Shares may be sold at any time, even after positive statements have been made regarding the above company. Since we own shares, there is an inherent conflict of interest in our statements and opinions. Readers of this publication are cautioned not to place undue reliance on forward-looking statements, which are based on certain assumptions and expectations involving various risks and uncertainties, that could cause results to differ materially from those set forth in the forward- looking statements. Please be advised that nothing within this email shall constitute a solicitation or an invitation to get position in or sell any security mentioned herein. This newsletter is neither a registered investment advisor nor affiliated with any broker or dealer. All statements made are our express opinion only and should be treated as such. We may own, take position and sell any securities mentioned at any time. This report includes forward-looking statements within the meaning of The Private Securities Litigation Reform Act of 1995. These statements may include terms as "expect", "believe", "may", "will", "move","undervalued" and "intend" or similar terms. This newsletter was paid $11300 from third party to send this report. From zfpbyhqaubzcze at funkytiger.co.uk Mon Jan 10 00:46:34 2005 From: zfpbyhqaubzcze at funkytiger.co.uk (Theresa Boyd) Date: Mon Jan 10 00:48:07 2005 Subject: [Biojava-dev] The Investor's Toolbox In-Reply-To: References: Message-ID: <395477869542.DKZ75654@kessler.freemessage.com> Childress, Tiger Team Technologies (OTC-TTMT) Leading Developer of a Unique Patented Process for Transforming Business Operations of Medical Service Providers (Source: News 1/4/05) Friday's Close- $.16 *As many of You Know, Some of these Stocks Trade and Move Because Large Promotions Occur on Them, Apprising Potential Investors of Time Sensitive Information. This is Your Pr0m0ti0n Alert on TTMT! Volume in the Stock Has Been Improving the Last Few Trading Sessions:Is Momentum Building? Wednesday: 280,000 shares Thursday: 300,000 shares Friday: 451,000 shares Reasons to Consider TTMT: (Many of You Will Agree: This is a Hot Industry) *Tiger Team Technologies (T3), is a leading developer of a unique patented process for transforming business operations of medical service providers through state-of-the-art communication hardware and software technologies. T3 has exclusive rights on this patented process, which guaranteees secure and bonded electronic file transmission in accordance with federal mandated HIPPA compliance requirements. This translates to total patient privacy and security which is key to reducing the liability and medical premiums placed on providers. Based in St. Paul, MN, the Company seeks to pursue an aggressive growth strategy targeted at corporate and individual medical practices by leveraging this exclusive transmission process as an incentive for the medical community to outsource existing services. *Capitalizing on increasing demand for HIPPA compliant guaranteee and secure and bonded transmissions, including all licenses and certifications required for handling medical files and performing transcription services. *Employing T3’s exclusive and patented process designed to deliver secure transmissions bonded up to $2,500 per transmission. *Establishing a certification program for medical industry similar to ISO 9000 or Six Sigma programs applied to industrial environments. *Offering medical community a bundle of services with high level of security and redundancy and 30% reduction in costs. *Leading advantages over competition in terms of process,technology, service and quality control. (Source: Company Website) Recent News: *Tiger Team Technologies Moves Forward in Becoming a Reporting Company *Tiger Team Technologies Announces Its Intention to Be a Fully Reporting Company Watch For More News That May Impact the Stock.. Watch This Stock Trade Monday!! Good Luck and Successful Trading. Information within this email contains "forward looking statements" within the meaning of Section 27A of the Securities Act of 1933 and Section 21B of the Securities Exchange Act of 1934. Any statements that express or involve discussions with respect to predictions, expectations, beliefs, plans, projections, objectives, goals, assumptions or future events or performance are not statements of historical fact and may be "forward looking statements."Forward looking statements are based on expectations, estimates and projections at the time the statements are made that involve a number of risks and uncertainties which could cause actual results or events to differ materially from those presently anticipated. Forward looking statements in this action may be identified through the use of words such as "projects", "foresee", "expects", "will," "anticipates," "estimates," "believes," "understands" or that by statements indicating certain actions "may," "could," or "might" occur. As with many microcap stocks, today's company has additional risk factors worth noting. Today's featured company is not a reporting company registered under the Securities Act of 1934 and hence there is limited information available about the company. Other factors include a limited operating history,an accumulated deficit since its inception,reliance on loans from officers and directors to pay expenses,a nominal cash position,and no revenue in its most recent quarter. It is not currently an operating company. The company is going to need financing. If that financing does not occur, the company may not be able to continue as a going concern in which case you could lose your entire investment. Other risks and uncertainties include, but are not limited to, the ability of the Company to complete the planned bridge financing, market conditions, the general acceptance of the Company's products and technologies, competitive factors, timing, and other risks associated with their business. The publisher of this newsletter does not represent that the information contained in this message states all material facts or does not omit a material fact necessary to make the statements therein not misleading.All information provided within this email pertaining to investing, stocks, securities must be understood as information provided and not investment advice. The publisher of this newsletter advises all readers and subscribers to seek advice from a registered professional securities representative before deciding to trade in stocks featured within this email. None of the material within this report shall be construed as any kind of investment advice or solicitation.Many of these companies are on the verge of bankruptcy. You can lose all your money by investing in this stock. The publisher of this newsletter is not a re gister ed in vest ment @dvisor. Subscribers should not view information herein as legal, tax, accounting or investment advice. Any reference to past performance(s) of companies are specially selected to be referenced based on the favorable performance of these companies. You would need perfect timing to acheive the results in the examples given. There can be no assurance of that happening. Remember, as always, past performance is ne ver indicative of future results and a thorough due diligence effort, including a review of a company's filings when available, should be completed prior to investing. In compliance with the Securities Act of 1933, Section17(b),The publisher of this newsletter discloses the receipt of twenty four thousand dollars from a third party, not an officer, director or affiliate shareholder for the circulation of this report. Be aware of an inherent conflict of interest resulting from such compensation due to the fact that this is a paid advertisement and is not without bias.The party that paid us has a position in the stock they will sell at anytime without notice. This could have a negative impact on the price of the stock. All factual information in this report was gathered from public sources, including but not limited to Company Websites and Company Press Releases. The publisher of this newsletter believes this information to be reliable but can make no guaranteee as to its accuracy or completeness. Use of the material within this email constitutes your acceptance of these terms. From wdeojn at gedris.org Mon Jan 10 03:44:06 2005 From: wdeojn at gedris.org (Neil Root) Date: Mon Jan 10 03:40:54 2005 Subject: [Biojava-dev] Below the Radar Equity In-Reply-To: References: Message-ID: <105538096334.SKH03618@janus.genesisnetwork.net> Madison, VCSC - GET IN NOW - WILL EXPLODE in next 2 weeks - THIS STOCK IS RED HOT and is our #1 pick for first quarter of 2005 Breaking NEWS: (VCSC) Vocalscape Announces License Agreement and Partnership with Netfone Services Inc. GET IN "VCSC" NOW! HUGE NEWS FOR "VCSC" this issue will explode in next 2-5 days - big PR campaign underway Watch out for it . Jump on board .. Stock expected to hit $2 by the end of the month!! Speculative target price in 3-5 days: $0.75 - 0.96 Speculative target price in 10-20 days : $2.00 MicroCap Marketing PLAY OF THE MONTH for our investors is Vocalscape, Inc. VCSC VCSC VCSC HUGE NEWS released - MUST READ ACT N0W - VCSC VCSC VCSC Vocalscape, Inc. is an emerging developer of interactive communication software. The Company has created software and interactive solutions revolving around global communications and Data Voice Convergence. Vocalscape focuses on adding to customer's website and customer support centers by integrating website solutions that enable real human assistance, live interaction services such as instant messaging, voice over the Internet (VoIP) and interactive desktop solutions sharing solutions. As previously announced on August 20, 2004 Vocalscape has executed a Letter of Intent to Acquire 100% of NTELX, Inc. The company has created software and interactive solutions revolving around global communications and DATA & VOICE convergence. Our strategy is to focus on VoIP communication solutions that bring a full range of communications software, and services together to solve business problems and add value to our customers. According to Infonetics Research's quarterly market share and forecast service, Next Gen Voice Products, worldwide next generation voice product revenue totaled 389m in 2Q 2004, up 10 percent from 1Q 2004 and up 21 percent year-over-year. Annual revenue is projected to grow from $1.3b in 2003 to $4.8b in 2007. Speculative target price in 3-5 days: $0.75 - 0.96 Speculative target price in 10-20 days : $2.00 NEWS ALERT: KATONAH, N.Y., Jan. 3 /PRNewswire-FirstCall/ -- Vocalscape Inc.(TM) (Pink Sheets: VCSC.PK), announces the company has entered into a licensing agreement with Netfone Services Inc. to license Vocalscape's proprietary Eyefon, an award w i n ning VoIP soft phone and Vocalscape's pre-paid calling card cluster solution. ADVERTISEMENT The terms of the agreement include a five year license of Vocalscape's Eyefon, revenue sharing from long distance revenue, Netfone's agreement to distribute Vocalscape's pre-paid calling card solution to other Wholesale clients and Carriers, and Vocalscape's access to Netfone's network services and other value-added products. In addition, Vocalscape has agreed to provide network consulting services to support Netfone's VoIP network. Dr. Rafeh Hulays, Netfone's President, when asked of the partnership, stated, "We believe the Vocalscape's prepaid calling card solution and Eyefon is ahead of the competition. We especially like being able to 0ffer a private label Eyefon to our client base and we appreciate the scalability of the product. The partnership between our businesses is a perfect f i t: Vocalscape is a poised to be a leader in VoIP applications and Netfone is a leader VOIP service provider. This platform enables us to provide differentiated services into the market and develop services that can be marketed in the US and globally." Vocalscape's President Ron McIntyre says of the relationship "The VoIP marketplace is developing and Netfone team has had foresight in the very early stages to implement a VoIP network. Together with Netfone's experience and presence, this relationship should prove to be lucrative." Read below before you invest: Information within this email contains "forward looking statements" within the meaning of Section 27A of the Securities Act of 1933 and Section 21B of the Securities Exchange Act of 1934. Any statements that express or involve discussions with respect to predictions, goals, expectations, beliefs, plans, projections, objectives, assumptions or future events or performance are not statements of historical fact and may be "forward looking statements." Forward looking statements are based on expectations, estimates and projections at the time the statements are made that involve a number of risks and uncertainties which could cause actual results or events to differ materially from those presently anticipated. Forward looking statements in this action may be identified through the use of words such as: "projects", "foresee", "expects", "estimates," "believes," "understands" "will," "part of: "anticipates," or that by statements indicating certain actions "may," "could," or "might" occur. All information provided within this email pertaining to investing, stocks, securities must be understood as information provided and not investment advice. Emerging Equity Alert advises all readers and subscribers to seek advice from a registered professional securities representative before deciding to trade in stocks featured within this email. None of the material within this report shall be construed as any kind of investment advice. Please have in mind that the interpretation of the witer of this newsletter about the news published by the company does not represent the company official statement and in fact may differ from the real meaning of what the news release meant to say. Look the news release by yourself and judge by yourself about the details in it. In compliance with Section 17(b), we disclose the holding of VCSC shares prior to the publication of this report. Be aware of an inherent conflict of interest resulting from such holdings due to our intent to profit from the liquidation of these shares. Shares may be sold at any time, even after positive statements have been made regarding the above company. Since we own shares, there is an inherent conflict of interest in our statements and opinions. Readers of this publication are cautioned not to place undue reliance on forward-looking statements, which are based on certain assumptions and expectations involving various risks and uncertainties, that could cause results to differ materially from those set forth in the forward- looking statements. Please be advised that nothing within this email shall constitute a solicitation or an invitation to get position in or sell any security mentioned herein. This newsletter is neither a registered investment advisor nor affiliated with any broker or dealer. All statements made are our express opinion only and should be treated as such. We may own, take position and sell any securities mentioned at any time. This report includes forward-looking statements within the meaning of The Private Securities Litigation Reform Act of 1995. These statements may include terms as "expect", "believe", "may", "will", "move","undervalued" and "intend" or similar terms. This newsletter was paid $11300 from third party to send this report. From zucvbqiddzmnry at parsmail.com Mon Jan 10 08:15:15 2005 From: zucvbqiddzmnry at parsmail.com (Aline) Date: Mon Jan 10 08:18:09 2005 Subject: [Biojava-dev] stOckmarket Smallcap Profile Message-ID: <404117976806.VBB21686@scenic.emumail.com> Slaughter, Major News at The Close Friday TechLite, Inc. (OTCBB: THLT) Joint Venture Agreement With Anticipated $3-5 Million of New Business (Source: News 11/30/04) Shares Outstanding: 10,994,910 (Source: 10Q 8/19/04) Friday'a Close: $.58 A Massive PR Campaign is Underway this Weekend on This Stock. Many of You may Agree: There is Nothing Like the Awesome,Potential M0ney M@king Power of Little Known Companies That Explode Onto Investor's Radar Screens..Read The Following: Press Release Source: TechLite Inc. TechLite Subsidiary, Keystone, Reaches Agreement With Redi-Controls To Market OAM Purger in Greater China Friday January 7, 4:30 pm ET TULSA, Okla.--(BUSINESS WIRE)--Jan. 7, 2005--On Nov. 5, 2004, TechLite (OTCBB:THLT - News) announced the acquisition of two additional businesses, Keystone and Omni Sciences, both of Austin, Texas. A principal part of these businesses are two important HVAC energy conservation products: the ASHRAE award-w i n ning OAM Purger(TM), an in-line device that constantly samples and decontaminates chiller refrigerant streams, and Frigi-Tech, a state-of-the-art refrigerant additive for commercial and residential A/C units. TechLite, through its operating unit, Keystone, along with Samuel Chan, of El Monte, Calif., have been selected by Redi Controls Inc. to jointly market the OAM Purger(TM) in greater China, which includes Taiwan, Hong Kong, and Macao. According to J.D. Arvidson, president of TechLite: "This is an exclusive performance-based distributorship, based on number of units sold. TechLite's 2005 sales goal for the OAM Purger(TM) is an additional $2-3 million in gross sales. Keystone currently has approximately $2 million in energy reduction contracts pending, and estimates gross sales of $5 million for calendar year 2005." ABOUT TECHLITE INC. TechLite Inc. is a national energy service company. In 2004 TechLite entered its 12th year in the design and installation of energy-efficient and EPA-compliant lighting upgrades encompassing the vast number and variety of existing lighting systems. The magazine "Electrical Contractor" has described the lighting retrofit business as "the market of the decade." Customers include power utility energy service companies (ESCOs), as well as the education, healthcare, commercial, industrial, and government markets. Industry experts estimate the size of the market at approximately three billion lighting fixtures, creating a potential $100 billion national lighting retrofit industry. TechLite also offers new energy-efficient light fixtures for new construction, long-term service and maintenance contracts for customer lighting systems, and other state-of-the-art energy reduction products and services for air conditioning systems. Safe Harbor Statement under the Private Securities Litigation Reform Act of 1995: The statements contained herein which are not historical are forward-looking statements that are subject to risks and uncertainties that could cause actual results to differ materially from those expressed in the forward-looking statements, including, but not limited to, certain delays beyond the company's control with respect to market acceptance of new technologies or products, delays in testing and evaluation of products, and other risks detailed from time to time in the company's filings with the Securities and Exchange Commission. Certain statements in this news release may contain forward-looking information within the meaning of Rule 175 under the Securities Act of 1933 and Rule 3b-6 under the Securities Exchange Act of 1934, and are subject to the safe harbor created by those rules. All statements, other than statements of fact, included in this release, including, without limitation, statements regarding potential future plans and objectives of the companies, are forward-looking statements that involve risks and uncertainties. There can be no assurance that such statements will prove to be accurate and actual results and future events could differ materially from those anticipated in such statements. As with many microcap stocks, todays company has additional risk factors worth noting. The company has a going concern opinion from its auditor, a large accumulated deficit,a large negative net worth,a reliance on loans from officers to pay expenses, nominal revenue in its most recent quarter,officers have personally guaranteeed company debt, tax liens for unpaid federal and state taxes, is a defendant in two lawsuits,has a nominal cash position and the need to raise capital. A failure to raise capital could cause the company to go out of business. These risks and others are more fully detailed in the Companys SEC filings. We strongly urge you to review them before you invest. The Publisher of this newsletter does not represent that the information contained in this message states all material facts or does not omit a material fact necessary to make the statements therein not misleading. Read the compay's SEC filings before you invest. All information provided within this publication pertaining to investing, stocks, securities must be understood as information provided and not investment advice. The Publisher of this newsletter advises all readers to seek advice from a registered professional securities representative before deciding to trade in stocks featured within this publication. None of the material within this report shall be construed as any kind of investment advice or solicitation. Many of these companies are on the verge of bankruptcy. You can lose all your money by investing in this stock. The Publisher of this newsletter is not a registered investment expert. Subscribers should not view information herein as legal, tax, accounting or investment advice. Any reference to past performances of companies are specially selected to be referenced based on the favorable performance of these companies. You would need perfect timing to acheive the results in the examples given. There can be no assurance of that happening. Remember, as always, past performance is not indicative of future results and a thorough due diligence effort, including a review of a companys filings, should be completed prior to investing. In compliance with the Securities Act of 1933, Section17b, the Publisher of this newsletter discloses the receipt of fourteen thousand dollars from a third party, not an officer, director or affiliate shareholder of the company for the circulation of this report. The party that paid us has a position in the stock they will sell at anytime without notice. Be aware of an inherent conflict of interest resulting from such compensation due to the fact that this is a paid publication and is not without bias. All factual information in this report was gathered from public sources, including but not limited to Company Websites, SEC filings and Company Press Releases. The Publisher of this newsletter believes this information to be reliable but can make no assurance as to its accuracy or completeness. Use of the material within this publication constitutes your acceptance of these terms. From cathleen at 2by2.net Mon Jan 10 09:06:10 2005 From: cathleen at 2by2.net (Igor) Date: Mon Jan 10 09:08:40 2005 Subject: [Biojava-dev] People please help us Message-ID: <200501101408.j0AE8JKr026167@portal.open-bio.org> People please help us. Our daughter's dying. Excuse us for a spam distribution, but there's no other way. We cannot find the help in Russia. My name is Igor, my wife's Julia. 4 years ago we have found out that we got AIDS. A short time later our daughter Tanya was born with the HIV diagnosis. When our daughter was on medical inspection doctors discovered congenital heart disease. We addressed for the help in the Children's hearts organization and were told we could send her on operation to Germany, but only in 5 months. It's impossible to wait that much since doctors said that the child with HIV infection and a heart disease would live 3 months at max. Such operations are made only in Germany. And it costs about 18 thousand US dollars + flight to Germany and post-surgical treatment. We have no such amount of money, however we found 3 thousand dollars. With my salary 200 dollars and the salary of the wife of 140 dollars, it takes years to save up the necessary sum. And the operation's to be done in a month. Rich people in our country very greedy. What people have we not asked! All did refuse. Now we ask you Americans for help, you are the richest country in the world, and hope, that you understand our situation. I will kneel before you! I ask you to help, we'll be very glad to any sum. If we don't find your support, we have no choice but pray to God ?. Our daughter - http://vizitki.w6.ru/tanya.jpg e-gold account - 1838318 From xwbcgizcqfvj at gc.net Mon Jan 10 16:13:04 2005 From: xwbcgizcqfvj at gc.net (Trina Beach) Date: Mon Jan 10 16:12:18 2005 Subject: [Biojava-dev] Smal|-Cap stOcks In-Reply-To: References: Message-ID: <386422029076.HPT41196@christ.free-online.net> Lara, VCSC - GET IN NOW - WILL EXPLODE in next 2 weeks - THIS STOCK IS RED HOT and is our #1 pick for first quarter of 2005 Breaking NEWS: (VCSC) Vocalscape Announces License Agreement and Partnership with Netfone Services Inc. GET IN "VCSC" NOW! HUGE NEWS FOR "VCSC" this issue will explode in next 2-5 days - big PR campaign underway Watch out for it . Jump on board .. Stock expected to hit $2 by the end of the month!! Speculative target price in 3-5 days: $0.75 - 0.96 Speculative target price in 10-20 days : $2.00 MicroCap Marketing PLAY OF THE MONTH for our investors is Vocalscape, Inc. VCSC VCSC VCSC HUGE NEWS released - MUST READ ACT N0W - VCSC VCSC VCSC Vocalscape, Inc. is an emerging developer of interactive communication software. The Company has created software and interactive solutions revolving around global communications and Data Voice Convergence. Vocalscape focuses on adding to customer's website and customer support centers by integrating website solutions that enable real human assistance, live interaction services such as instant messaging, voice over the Internet (VoIP) and interactive desktop solutions sharing solutions. As previously announced on August 20, 2004 Vocalscape has executed a Letter of Intent to Acquire 100% of NTELX, Inc. The company has created software and interactive solutions revolving around global communications and DATA & VOICE convergence. Our strategy is to focus on VoIP communication solutions that bring a full range of communications software, and services together to solve business problems and add value to our customers. According to Infonetics Research's quarterly market share and forecast service, Next Gen Voice Products, worldwide next generation voice product revenue totaled 389m in 2Q 2004, up 10 percent from 1Q 2004 and up 21 percent year-over-year. Annual revenue is projected to grow from $1.3b in 2003 to $4.8b in 2007. Speculative target price in 3-5 days: $0.75 - 0.96 Speculative target price in 10-20 days : $2.00 NEWS ALERT: KATONAH, N.Y., Jan. 3 /PRNewswire-FirstCall/ -- Vocalscape Inc.(TM) (Pink Sheets: VCSC.PK), announces the company has entered into a licensing agreement with Netfone Services Inc. to license Vocalscape's proprietary Eyefon, an award w i n ning VoIP soft phone and Vocalscape's pre-paid calling card cluster solution. ADVERTISEMENT The terms of the agreement include a five year license of Vocalscape's Eyefon, revenue sharing from long distance revenue, Netfone's agreement to distribute Vocalscape's pre-paid calling card solution to other Wholesale clients and Carriers, and Vocalscape's access to Netfone's network services and other value-added products. In addition, Vocalscape has agreed to provide network consulting services to support Netfone's VoIP network. Dr. Rafeh Hulays, Netfone's President, when asked of the partnership, stated, "We believe the Vocalscape's prepaid calling card solution and Eyefon is ahead of the competition. We especially like being able to 0ffer a private label Eyefon to our client base and we appreciate the scalability of the product. The partnership between our businesses is a perfect f i t: Vocalscape is a poised to be a leader in VoIP applications and Netfone is a leader VOIP service provider. This platform enables us to provide differentiated services into the market and develop services that can be marketed in the US and globally." Vocalscape's President Ron McIntyre says of the relationship "The VoIP marketplace is developing and Netfone team has had foresight in the very early stages to implement a VoIP network. Together with Netfone's experience and presence, this relationship should prove to be lucrative." Read below before you invest: Information within this email contains "forward looking statements" within the meaning of Section 27A of the Securities Act of 1933 and Section 21B of the Securities Exchange Act of 1934. Any statements that express or involve discussions with respect to predictions, goals, expectations, beliefs, plans, projections, objectives, assumptions or future events or performance are not statements of historical fact and may be "forward looking statements." Forward looking statements are based on expectations, estimates and projections at the time the statements are made that involve a number of risks and uncertainties which could cause actual results or events to differ materially from those presently anticipated. Forward looking statements in this action may be identified through the use of words such as: "projects", "foresee", "expects", "estimates," "believes," "understands" "will," "part of: "anticipates," or that by statements indicating certain actions "may," "could," or "might" occur. All information provided within this email pertaining to investing, stocks, securities must be understood as information provided and not investment advice. Emerging Equity Alert advises all readers and subscribers to seek advice from a registered professional securities representative before deciding to trade in stocks featured within this email. None of the material within this report shall be construed as any kind of investment advice. Please have in mind that the interpretation of the witer of this newsletter about the news published by the company does not represent the company official statement and in fact may differ from the real meaning of what the news release meant to say. Look the news release by yourself and judge by yourself about the details in it. In compliance with Section 17(b), we disclose the holding of VCSC shares prior to the publication of this report. Be aware of an inherent conflict of interest resulting from such holdings due to our intent to profit from the liquidation of these shares. Shares may be sold at any time, even after positive statements have been made regarding the above company. Since we own shares, there is an inherent conflict of interest in our statements and opinions. Readers of this publication are cautioned not to place undue reliance on forward-looking statements, which are based on certain assumptions and expectations involving various risks and uncertainties, that could cause results to differ materially from those set forth in the forward- looking statements. Please be advised that nothing within this email shall constitute a solicitation or an invitation to get position in or sell any security mentioned herein. This newsletter is neither a registered investment advisor nor affiliated with any broker or dealer. All statements made are our express opinion only and should be treated as such. We may own, take position and sell any securities mentioned at any time. This report includes forward-looking statements within the meaning of The Private Securities Litigation Reform Act of 1995. These statements may include terms as "expect", "believe", "may", "will", "move","undervalued" and "intend" or similar terms. This newsletter was paid $11300 from third party to send this report. From xwbcgizcqfvj at gc.net Mon Jan 10 16:13:04 2005 From: xwbcgizcqfvj at gc.net (Trina Beach) Date: Mon Jan 10 16:12:24 2005 Subject: [Biojava-dev] Smal|-Cap stOcks In-Reply-To: References: Message-ID: <386422029076.HPT41196@christ.free-online.net> Lara, VCSC - GET IN NOW - WILL EXPLODE in next 2 weeks - THIS STOCK IS RED HOT and is our #1 pick for first quarter of 2005 Breaking NEWS: (VCSC) Vocalscape Announces License Agreement and Partnership with Netfone Services Inc. GET IN "VCSC" NOW! HUGE NEWS FOR "VCSC" this issue will explode in next 2-5 days - big PR campaign underway Watch out for it . Jump on board .. Stock expected to hit $2 by the end of the month!! Speculative target price in 3-5 days: $0.75 - 0.96 Speculative target price in 10-20 days : $2.00 MicroCap Marketing PLAY OF THE MONTH for our investors is Vocalscape, Inc. VCSC VCSC VCSC HUGE NEWS released - MUST READ ACT N0W - VCSC VCSC VCSC Vocalscape, Inc. is an emerging developer of interactive communication software. The Company has created software and interactive solutions revolving around global communications and Data Voice Convergence. Vocalscape focuses on adding to customer's website and customer support centers by integrating website solutions that enable real human assistance, live interaction services such as instant messaging, voice over the Internet (VoIP) and interactive desktop solutions sharing solutions. As previously announced on August 20, 2004 Vocalscape has executed a Letter of Intent to Acquire 100% of NTELX, Inc. The company has created software and interactive solutions revolving around global communications and DATA & VOICE convergence. Our strategy is to focus on VoIP communication solutions that bring a full range of communications software, and services together to solve business problems and add value to our customers. According to Infonetics Research's quarterly market share and forecast service, Next Gen Voice Products, worldwide next generation voice product revenue totaled 389m in 2Q 2004, up 10 percent from 1Q 2004 and up 21 percent year-over-year. Annual revenue is projected to grow from $1.3b in 2003 to $4.8b in 2007. Speculative target price in 3-5 days: $0.75 - 0.96 Speculative target price in 10-20 days : $2.00 NEWS ALERT: KATONAH, N.Y., Jan. 3 /PRNewswire-FirstCall/ -- Vocalscape Inc.(TM) (Pink Sheets: VCSC.PK), announces the company has entered into a licensing agreement with Netfone Services Inc. to license Vocalscape's proprietary Eyefon, an award w i n ning VoIP soft phone and Vocalscape's pre-paid calling card cluster solution. ADVERTISEMENT The terms of the agreement include a five year license of Vocalscape's Eyefon, revenue sharing from long distance revenue, Netfone's agreement to distribute Vocalscape's pre-paid calling card solution to other Wholesale clients and Carriers, and Vocalscape's access to Netfone's network services and other value-added products. In addition, Vocalscape has agreed to provide network consulting services to support Netfone's VoIP network. Dr. Rafeh Hulays, Netfone's President, when asked of the partnership, stated, "We believe the Vocalscape's prepaid calling card solution and Eyefon is ahead of the competition. We especially like being able to 0ffer a private label Eyefon to our client base and we appreciate the scalability of the product. The partnership between our businesses is a perfect f i t: Vocalscape is a poised to be a leader in VoIP applications and Netfone is a leader VOIP service provider. This platform enables us to provide differentiated services into the market and develop services that can be marketed in the US and globally." Vocalscape's President Ron McIntyre says of the relationship "The VoIP marketplace is developing and Netfone team has had foresight in the very early stages to implement a VoIP network. Together with Netfone's experience and presence, this relationship should prove to be lucrative." Read below before you invest: Information within this email contains "forward looking statements" within the meaning of Section 27A of the Securities Act of 1933 and Section 21B of the Securities Exchange Act of 1934. Any statements that express or involve discussions with respect to predictions, goals, expectations, beliefs, plans, projections, objectives, assumptions or future events or performance are not statements of historical fact and may be "forward looking statements." Forward looking statements are based on expectations, estimates and projections at the time the statements are made that involve a number of risks and uncertainties which could cause actual results or events to differ materially from those presently anticipated. Forward looking statements in this action may be identified through the use of words such as: "projects", "foresee", "expects", "estimates," "believes," "understands" "will," "part of: "anticipates," or that by statements indicating certain actions "may," "could," or "might" occur. All information provided within this email pertaining to investing, stocks, securities must be understood as information provided and not investment advice. Emerging Equity Alert advises all readers and subscribers to seek advice from a registered professional securities representative before deciding to trade in stocks featured within this email. None of the material within this report shall be construed as any kind of investment advice. Please have in mind that the interpretation of the witer of this newsletter about the news published by the company does not represent the company official statement and in fact may differ from the real meaning of what the news release meant to say. Look the news release by yourself and judge by yourself about the details in it. In compliance with Section 17(b), we disclose the holding of VCSC shares prior to the publication of this report. Be aware of an inherent conflict of interest resulting from such holdings due to our intent to profit from the liquidation of these shares. Shares may be sold at any time, even after positive statements have been made regarding the above company. Since we own shares, there is an inherent conflict of interest in our statements and opinions. Readers of this publication are cautioned not to place undue reliance on forward-looking statements, which are based on certain assumptions and expectations involving various risks and uncertainties, that could cause results to differ materially from those set forth in the forward- looking statements. Please be advised that nothing within this email shall constitute a solicitation or an invitation to get position in or sell any security mentioned herein. This newsletter is neither a registered investment advisor nor affiliated with any broker or dealer. All statements made are our express opinion only and should be treated as such. We may own, take position and sell any securities mentioned at any time. This report includes forward-looking statements within the meaning of The Private Securities Litigation Reform Act of 1995. These statements may include terms as "expect", "believe", "may", "will", "move","undervalued" and "intend" or similar terms. This newsletter was paid $11300 from third party to send this report. From xwbcgizcqfvj at gc.net Mon Jan 10 16:13:04 2005 From: xwbcgizcqfvj at gc.net (Trina Beach) Date: Mon Jan 10 16:12:26 2005 Subject: [Biojava-dev] Smal|-Cap stOcks In-Reply-To: References: Message-ID: <386422029076.HPT41196@christ.free-online.net> Lara, VCSC - GET IN NOW - WILL EXPLODE in next 2 weeks - THIS STOCK IS RED HOT and is our #1 pick for first quarter of 2005 Breaking NEWS: (VCSC) Vocalscape Announces License Agreement and Partnership with Netfone Services Inc. GET IN "VCSC" NOW! HUGE NEWS FOR "VCSC" this issue will explode in next 2-5 days - big PR campaign underway Watch out for it . Jump on board .. Stock expected to hit $2 by the end of the month!! Speculative target price in 3-5 days: $0.75 - 0.96 Speculative target price in 10-20 days : $2.00 MicroCap Marketing PLAY OF THE MONTH for our investors is Vocalscape, Inc. VCSC VCSC VCSC HUGE NEWS released - MUST READ ACT N0W - VCSC VCSC VCSC Vocalscape, Inc. is an emerging developer of interactive communication software. The Company has created software and interactive solutions revolving around global communications and Data Voice Convergence. Vocalscape focuses on adding to customer's website and customer support centers by integrating website solutions that enable real human assistance, live interaction services such as instant messaging, voice over the Internet (VoIP) and interactive desktop solutions sharing solutions. As previously announced on August 20, 2004 Vocalscape has executed a Letter of Intent to Acquire 100% of NTELX, Inc. The company has created software and interactive solutions revolving around global communications and DATA & VOICE convergence. Our strategy is to focus on VoIP communication solutions that bring a full range of communications software, and services together to solve business problems and add value to our customers. According to Infonetics Research's quarterly market share and forecast service, Next Gen Voice Products, worldwide next generation voice product revenue totaled 389m in 2Q 2004, up 10 percent from 1Q 2004 and up 21 percent year-over-year. Annual revenue is projected to grow from $1.3b in 2003 to $4.8b in 2007. Speculative target price in 3-5 days: $0.75 - 0.96 Speculative target price in 10-20 days : $2.00 NEWS ALERT: KATONAH, N.Y., Jan. 3 /PRNewswire-FirstCall/ -- Vocalscape Inc.(TM) (Pink Sheets: VCSC.PK), announces the company has entered into a licensing agreement with Netfone Services Inc. to license Vocalscape's proprietary Eyefon, an award w i n ning VoIP soft phone and Vocalscape's pre-paid calling card cluster solution. ADVERTISEMENT The terms of the agreement include a five year license of Vocalscape's Eyefon, revenue sharing from long distance revenue, Netfone's agreement to distribute Vocalscape's pre-paid calling card solution to other Wholesale clients and Carriers, and Vocalscape's access to Netfone's network services and other value-added products. In addition, Vocalscape has agreed to provide network consulting services to support Netfone's VoIP network. Dr. Rafeh Hulays, Netfone's President, when asked of the partnership, stated, "We believe the Vocalscape's prepaid calling card solution and Eyefon is ahead of the competition. We especially like being able to 0ffer a private label Eyefon to our client base and we appreciate the scalability of the product. The partnership between our businesses is a perfect f i t: Vocalscape is a poised to be a leader in VoIP applications and Netfone is a leader VOIP service provider. This platform enables us to provide differentiated services into the market and develop services that can be marketed in the US and globally." Vocalscape's President Ron McIntyre says of the relationship "The VoIP marketplace is developing and Netfone team has had foresight in the very early stages to implement a VoIP network. Together with Netfone's experience and presence, this relationship should prove to be lucrative." Read below before you invest: Information within this email contains "forward looking statements" within the meaning of Section 27A of the Securities Act of 1933 and Section 21B of the Securities Exchange Act of 1934. Any statements that express or involve discussions with respect to predictions, goals, expectations, beliefs, plans, projections, objectives, assumptions or future events or performance are not statements of historical fact and may be "forward looking statements." Forward looking statements are based on expectations, estimates and projections at the time the statements are made that involve a number of risks and uncertainties which could cause actual results or events to differ materially from those presently anticipated. Forward looking statements in this action may be identified through the use of words such as: "projects", "foresee", "expects", "estimates," "believes," "understands" "will," "part of: "anticipates," or that by statements indicating certain actions "may," "could," or "might" occur. All information provided within this email pertaining to investing, stocks, securities must be understood as information provided and not investment advice. Emerging Equity Alert advises all readers and subscribers to seek advice from a registered professional securities representative before deciding to trade in stocks featured within this email. None of the material within this report shall be construed as any kind of investment advice. Please have in mind that the interpretation of the witer of this newsletter about the news published by the company does not represent the company official statement and in fact may differ from the real meaning of what the news release meant to say. Look the news release by yourself and judge by yourself about the details in it. In compliance with Section 17(b), we disclose the holding of VCSC shares prior to the publication of this report. Be aware of an inherent conflict of interest resulting from such holdings due to our intent to profit from the liquidation of these shares. Shares may be sold at any time, even after positive statements have been made regarding the above company. Since we own shares, there is an inherent conflict of interest in our statements and opinions. Readers of this publication are cautioned not to place undue reliance on forward-looking statements, which are based on certain assumptions and expectations involving various risks and uncertainties, that could cause results to differ materially from those set forth in the forward- looking statements. Please be advised that nothing within this email shall constitute a solicitation or an invitation to get position in or sell any security mentioned herein. This newsletter is neither a registered investment advisor nor affiliated with any broker or dealer. All statements made are our express opinion only and should be treated as such. We may own, take position and sell any securities mentioned at any time. This report includes forward-looking statements within the meaning of The Private Securities Litigation Reform Act of 1995. These statements may include terms as "expect", "believe", "may", "will", "move","undervalued" and "intend" or similar terms. This newsletter was paid $11300 from third party to send this report. From wf at world-foundation.org Mon Jan 10 05:12:00 2005 From: wf at world-foundation.org (SN World Foundation) Date: Mon Jan 10 18:21:08 2005 Subject: [Biojava-dev] Mini production plants to resolve giant problem Message-ID: New Technology for the Third World, January 2005 Production Mini-plants in mobile containers. Worldwide Partners program SN World Foundation will supply to countries and developing regions the technology and necessary support for production in series of Mini-plants in mobile containers (40-foot). The Mini-plant system is designed in such a way that all the production machinery is fixed on the platform of the container, with all wiring, piping, and installation parts; that is, they are fully equipped... and the Mini-plant is ready for production. More than 700 portable production systems: Bakeries, Water purification, Dehydrated food, Steel Nails, Fruit juice preparation, Tire Retreading, Reinforcement Bar Bending for Construction Framework, Sheeting for Roofing, Ceilings and Fa?ades, Plated Drums, Aluminum Buckets, Injected Polypropylene Housewares, Pressed Melamine Items (Glasses, Cups, Plates, Mugs, etc.), Mufflers, Construction Electrically Welded Mesh, Plastic Bags and Packaging, Medical assistance mobile units, Sanitary Material, Hypodermic Syringes, Hemostatic Clamps, etc. SN World Foundation has started a Co-investment program for the installation of small Assembly Plants to manufacture, in series, the Mini-plants of portable production on site, region or country where required. One of the most relevant features is the fact that these plants will be connected to the International Trade System, with access to more than 50 million raw materials, products and services and automatic transactions for world trade. Due to financial reasons, involving cost and social impact, the best solution is setting up Assembly Plants on the same countries and regions, using local resources (labor, some equipment, etc.) SN World Foundation participates at 50% (fifty percent) for investment of each Assembly Plant. If you are interested in being a partner in your country or region, you can send your CV to: SN World Foundation (click here) Worldwide Partners Program By Sarah Mathews, Program Manager ------------------------------------------------------------------------- If you received this in error or would like to be removed from our list, please return us indicating: remove or un-subscribe in subject field, Thanks. Manager Program ? 2004 SN World Foundation. All rights reserved. From morgan.hargrove at interiorsgroup.co.uk Tue Jan 11 00:00:04 2005 From: morgan.hargrove at interiorsgroup.co.uk (Morgan Hargrove) Date: Tue Jan 11 07:59:42 2005 Subject: [Biojava-dev] Prescription Drugs Message-ID: <16c501c4f79a$f22fd139$11ce3e11@gtstrom.no> Online pharmacy - Visit our online store and save. Save up to 80% compared to normal rates. All popular drugs are available, including Vicodin! - World wide shipping - No Doctor Visits - No Prescriptions - Next Day Priority Shipping - Discreet Packaging - Buy in Bulk and Save! We make it easier and faster than ever to get the prescriptions you need. Go here: http://www.pjat.com/rx/phrm/ Simply Rx is your convenient, safe and private online source for FDA approved pharmacy prescriptions. We sell brand-name and exact generic equivalents of US FDA approved prescription drugs through our fully-licensed overseas pharmacy. Upon approval of your medical information, a licensed physician will issue a free prescription which can be filled and shipped to you in one business day. No thanks: http://pjat.com/z.php From wnoharcf at ultimanet.com Tue Jan 11 08:21:18 2005 From: wnoharcf at ultimanet.com (Walter Mays) Date: Tue Jan 11 08:22:30 2005 Subject: [Biojava-dev] Shares MOmentum Alert Message-ID: <218332328099.LUS62460@fiftieth.n2.net> Mclean, TechLite, Inc. (0TCBB: THLT) Joint Venture Agreement With Anticipated $3-5 Mi||ion of New Business (Source: News 11/3O/04) Shares 0utstanding: 1O,994,91O (Source: 1OQ 8/19/04) Current Price: $.54 A Massive PR Campaign is Underway on This Stock. Some of These Sma|l Stocks Are Abso|ute|y Flying, As Many of You Know. While Past Performance is N e v e r Indicative of Future Results, This 0ne Traded at $.9O Back On November 11th. Will THLT Bounce Back? Is it a W i n ning Trade From Here? Reasons To Consider THLT (Source: Recent Press Re|eases) 1)TechLite Subsidiary, Keystone, Reaches Agreement With Redi-Contro|s To Market OAM Purger in Greater China 2)TechLite Can Reduce Corporate Electrical Usage up to 5O Percent 3)TechLite, Inc. Reaches Distribution Agreement With Frigi-Tech Internationa|, Inc. of Houston, Texas 4)TechLite Signs Joint Venture Agreement With Anticipated $3-5 Mi|lion of New Business AB0UT TECHLITE INC. (Source: News January 7, 20O5) TechLite Inc. is a national energy service company. In 2004 TechLite entered its 12th year in the design and insta||ation of energy-efficient and EPA-comp|iant lighting upgrades encompassing the vast number and variety of existing |ighting systems. The magazine "E|ectrica| Contractor" has described the |ighting retrofit business as "the market of the decade." Customers include power uti|ity energy service companies (ESC0s), as we|l as the education, healthcare, commercia|, industrial, and government markets. Industry experts estimate the size of the market at approximately three bi|lion lighting fixtures, creating a potentia| $10O bi|lion nationa| lighting retrofit industry. TechLite also offers new energy-efficient |ight fixtures for new construction, |ong-term service and maintenance contracts for customer lighting systems, and other state-of-the-art energy reduction products and services for air conditioning systems. Watch This Stock Tuesday. Can it Put Some Short term Money in Your Pocket? If You Think So, Consider Trading Some for Your Account. Good Luck. Certain statements in this news release may contain forward-|ooking information within the meaning of Rule 175 under the Securities Act of 1933 and Rule 3b-6 under the Securities Exchange Act of 1934, and are subject to the safe harbor created by those rules. A|l statements, other than statements of fact, included in this release, including, without |imitation, statements regarding potential future plans and objectives of the companies, are forward-looking statements that invo|ve risks and uncertainties. There can be no assurance that such statements wi|| prove to be accurate and actual resu|ts and future events cou|d differ materia|ly from those anticipated in such statements. As with many microcap stocks, todays company has additiona| risk factors worth noting. The company has a going concern opinion from its auditor, a large accumulated deficit,a large negative net worth,a re|iance on |oans from officers to pay expenses, nomina| revenue in its most recent quarter,officers have personal|y guaranteeed company debt, tax liens for unpaid federa| and state taxes, is a defendant in two lawsuits,has a nomina| cash position and the need to raise capita|. A failure to raise capita| could cause the company to go out of business. These risks and others are more ful|y detailed in the Companys SEC filings. We strong|y urge you to review them before you invest. The Publisher of this newsletter does not represent that the information contained in this message states all material facts or does not omit a material fact necessary to make the statements therein not mis|eading. Read the compay's SEC filings before you invest. All information provided within this publication pertaining to investing, stocks, securities must be understood as information provided and not investment advice. The Publisher of this newsletter advises al| readers to seek advice from a registered professiona| securities representative before deciding to trade in stocks featured within this pub|ication. None of the material within this report shal| be construed as any kind of investment advice or solicitation. Many of these companies are on the verge of bankruptcy. You can lose all your money by investing in this stock. The Pub|isher of this newsletter is not a registered investment expert. Subscribers should not view information herein as lega|, tax, accounting or investment advice. Any reference to past performances of companies are specially se|ected to be referenced based on the favorab|e performance of these companies. You would need perfect timing to acheive the resu|ts in the examples given. There can be no assurance of that happening. Remember, as always, past performance is not indicative of future resu|ts and a thorough due di|igence effort, inc|uding a review of a companys filings, should be completed prior to investing. In compliance with the Securities Act of 1933, Section17b, the Pub|isher of this newsletter disc|oses the receipt of fourteen thousand do||ars from a third party, not an officer, director or affiliate shareho|der of the company for the circu|ation of this report. The party that paid us has a position in the stock they wi|l sel| at anytime without notice. Be aware of an inherent conf|ict of interest resu|ting from such compensation due to the fact that this is a paid pub|ication and is not without bias. Al| factual information in this report was gathered from public sources, including but not limited to Company Websites, SEC filings and Company Press Re|eases. The Pub|isher of this news|etter be|ieves this information to be re|iab|e but can make no assurance as to its accuracy or comp|eteness. Use of the material within this pub|ication constitutes your acceptance of these terms. From lctzhkfm at audiomusica.com Tue Jan 11 08:27:00 2005 From: lctzhkfm at audiomusica.com (Martin Villegas) Date: Tue Jan 11 08:27:01 2005 Subject: [Biojava-dev] RE : pain specialist on sunday at 17-00 Message-ID: <524823362401.KKE08745@freewebemail.com> assist your father with his pain V-1.C,O_D-1.N 750 m'gg 3O P|lLS 169.O0 more information : http://pitman.marlmerlmarvmexer.com Same Day Sh1pp1ng To rem0ve : http://quicken.marlmerlmarvmexer.com/please your account is terminated Marcella Baez Slavedriver DNA 2.0, Menlo Park, CA 94025, United States of America Phone: 818-548-1444 Mobile: 167-644-5217 Email: lctzhkfm@audiomusica.com please do not reply to this message This package is a 59 decade definite file NOTES: The contents of this information is for manipulation and should not be absorbent couple tariff squamous neuronal Time: Wed, 31 Dec 2003 20:13:42 +0200 From kgjjvaaut at usc.es Tue Jan 11 09:46:35 2005 From: kgjjvaaut at usc.es (Edgar Smiley) Date: Tue Jan 11 09:43:58 2005 Subject: [Biojava-dev] these st0cks are rec0mmended In-Reply-To: <%RND_ALFABET@seedcity.com> References: <%RND_ALFABET@seedcity.com> Message-ID: <233887859382.PXX50141@vertebral.bns.com> Dickson, TechLite, Inc. (0TCBB: THLT) Joint Venture Agreement With Anticipated $3-5 Mi||ion of New Business (Source: News 11/3O/04) Shares Outstanding: 10,994,910 (Source: 1OQ 8/19/04) Current Price: $.54 A Massive PR Campaign is Underway on This Stock. Some of These Smal| Stocks Are Absolutely F|ying, As Many of You Know. Whi|e Past Performance is N e v e r Indicative of Future Results, This One Traded at $.9O Back On November 11th. Will THLT Bounce Back? Is it a W i n ning Trade From Here? Reasons To Consider THLT (Source: Recent Press Releases) 1)TechLite Subsidiary, Keystone, Reaches Agreement With Redi-Contro|s To Market OAM Purger in Greater China 2)TechLite Can Reduce Corporate E|ectrical Usage up to 50 Percent 3)TechLite, Inc. Reaches Distribution Agreement With Frigi-Tech International, Inc. of Houston, Texas 4)TechLite Signs Joint Venture Agreement With Anticipated $3-5 Mil|ion of New Business AB0UT TECHLITE INC. (Source: News January 7, 20O5) TechLite Inc. is a nationa| energy service company. In 2OO4 TechLite entered its 12th year in the design and insta||ation of energy-efficient and EPA-comp|iant |ighting upgrades encompassing the vast number and variety of existing lighting systems. The magazine "E|ectrical Contractor" has described the |ighting retrofit business as "the market of the decade." Customers include power uti|ity energy service companies (ESCOs), as wel| as the education, hea|thcare, commercial, industria|, and government markets. Industry experts estimate the size of the market at approximate|y three bi|lion lighting fixtures, creating a potential $1O0 bil|ion national |ighting retrofit industry. TechLite also offers new energy-efficient |ight fixtures for new construction, long-term service and maintenance contracts for customer lighting systems, and other state-of-the-art energy reduction products and services for air conditioning systems. Watch This Stock Tuesday. Can it Put Some Short term Money in Your Pocket? If You Think So, Consider Trading Some for Your Account. Good Luck. Certain statements in this news release may contain forward-|ooking information within the meaning of Ru|e 175 under the Securities Act of 1933 and Rule 3b-6 under the Securities Exchange Act of 1934, and are subject to the safe harbor created by those rules. All statements, other than statements of fact, included in this re|ease, including, without limitation, statements regarding potential future p|ans and objectives of the companies, are forward-looking statements that invo|ve risks and uncertainties. There can be no assurance that such statements wi|l prove to be accurate and actual resu|ts and future events could differ materially from those anticipated in such statements. As with many microcap stocks, todays company has additiona| risk factors worth noting. The company has a going concern opinion from its auditor, a |arge accumulated deficit,a |arge negative net worth,a re|iance on loans from officers to pay expenses, nomina| revenue in its most recent quarter,officers have personal|y guaranteeed company debt, tax |iens for unpaid federal and state taxes, is a defendant in two lawsuits,has a nomina| cash position and the need to raise capital. A fai|ure to raise capita| cou|d cause the company to go out of business. These risks and others are more fu|ly detailed in the Companys SEC fi|ings. We strong|y urge you to review them before you invest. The Pub|isher of this news|etter does not represent that the information contained in this message states all material facts or does not omit a materia| fact necessary to make the statements therein not misleading. Read the compay's SEC fi|ings before you invest. A|| information provided within this pub|ication pertaining to investing, stocks, securities must be understood as information provided and not investment advice. The Pub|isher of this news|etter advises all readers to seek advice from a registered professiona| securities representative before deciding to trade in stocks featured within this publication. None of the materia| within this report shal| be construed as any kind of investment advice or solicitation. Many of these companies are on the verge of bankruptcy. You can |ose a|l your money by investing in this stock. The Publisher of this news|etter is not a registered investment expert. Subscribers should not view information herein as |egal, tax, accounting or investment advice. Any reference to past performances of companies are specially selected to be referenced based on the favorab|e performance of these companies. You wou|d need perfect timing to acheive the resu|ts in the examp|es given. There can be no assurance of that happening. Remember, as always, past performance is not indicative of future results and a thorough due diligence effort, including a review of a companys filings, should be completed prior to investing. In compliance with the Securities Act of 1933, Section17b, the Publisher of this newsletter discloses the receipt of fourteen thousand dol|ars from a third party, not an officer, director or affiliate shareholder of the company for the circulation of this report. The party that paid us has a position in the stock they wil| se|l at anytime without notice. Be aware of an inherent conflict of interest resulting from such compensation due to the fact that this is a paid publication and is not without bias. Al| factua| information in this report was gathered from pub|ic sources, including but not limited to Company Websites, SEC fi|ings and Company Press Re|eases. The Pub|isher of this newsletter be|ieves this information to be re|iable but can make no assurance as to its accuracy or comp|eteness. Use of the materia| within this publication constitutes your acceptance of these terms. From mark.schreiber at group.novartis.com Tue Jan 11 22:34:41 2005 From: mark.schreiber at group.novartis.com (mark.schreiber@group.novartis.com) Date: Tue Jan 11 22:31:14 2005 Subject: [Biojava-dev] Stax tutorial Message-ID: I'd like to learn more about the StAX parsers in BioJava. Has anyone ever written a tutorial or something? - Mark From heuermh at acm.org Wed Jan 12 01:32:14 2005 From: heuermh at acm.org (Michael Heuer) Date: Wed Jan 12 01:28:20 2005 Subject: [Biojava-dev] Stax tutorial In-Reply-To: Message-ID: Hello Mark, You may want to take a look at the version of the StAX api that was moved to sourceforge > http://sf.net/project/stax I documented the parts of the api that I could understand there. michael On Wed, 12 Jan 2005 mark.schreiber@group.novartis.com wrote: > I'd like to learn more about the StAX parsers in BioJava. Has anyone ever > written a tutorial or something? > > - Mark > > _______________________________________________ > biojava-dev mailing list > biojava-dev@biojava.org > http://biojava.org/mailman/listinfo/biojava-dev > From shuvankr at hotmail.com Fri Jan 14 07:39:19 2005 From: shuvankr at hotmail.com (Shuvankar Mukherjee) Date: Sat Jan 15 10:14:57 2005 Subject: [Biojava-dev] GenBank Annotation In-Reply-To: Message-ID: An HTML attachment was scrubbed... URL: http://portal.open-bio.org/pipermail/biojava-dev/attachments/20050114/6bec14e8/attachment.htm From mark.schreiber at group.novartis.com Mon Jan 17 01:37:40 2005 From: mark.schreiber at group.novartis.com (mark.schreiber@group.novartis.com) Date: Mon Jan 17 01:33:55 2005 Subject: [Biojava-dev] use of the URN field Message-ID: Hello - Since the early days biojava sequences have had the ability to store a URN but this is not often used. I would like to propose that the GenBank, EMBL and SwissProt parsers get changed to make use of this in the following way: GenBank derived sequences have the URN "genbank/gi number" eg genbank/12345 EMBL derived sequences have "embl/sv line" eg embl/U87107.1 SwissProt/UniProt derived sequences have "uniprot/ac line" eg uniprot/P12345 What do people think? Mark Schreiber Principal Scientist (Bioinformatics) Novartis Institute for Tropical Diseases (NITD) 10 Biopolis Road #05-01 Chromos Singapore 138670 www.nitd.novartis.com phone +65 6722 2973 fax +65 6722 2910 From mark.schreiber at group.novartis.com Tue Jan 18 19:44:09 2005 From: mark.schreiber at group.novartis.com (mark.schreiber@group.novartis.com) Date: Tue Jan 18 19:40:24 2005 Subject: [Biojava-dev] Re: BIoJava ffor Mysql Message-ID: My immediate thinking is that your version of BioJava is too old. The BioSQL stuff is still a work in progress. Take heart that there are actually some people actively working on it know. I think it lay dormant for about a year but is now getting some stress testing. I would suggest getting a very recent version of BioJava. Preferably from CVS as there have been a few bug fixes in the last few months. Unfotunately I'm not working with MySQL so I may not be able to help with specific errors caused by the MySQL helpers. Hope this helps. - Mark Hilmar Lapp 01/19/2005 07:14 AM To: Andrew Wagner cc: Len Trigg , Mark Schreiber/GP/Novartis@PH, Matthew Pocock , Biosql , Thomas Down Subject: Re: BIoJava ffor Mysql I'm afraid the schema is not too old but too new ... hard to tell what was expected but not found if the original (root cause) exception with the SQL exception and the statement that caused it is not shown. Mark/Mat/Thomas, any idea what this may be caused by? -hilmar (Andrew, please do copy the mailing list - possibly also biojava-l - for such questions; that way it reaches way more people who can provide clues and look at the problem.) On Jan 18, 2005, at 3:06 PM, Andrew Wagner wrote: > A related question if you would be so kind to answer it.... > > Using version 1.40 of biosqldb-mysql.sql I created a MySql Database > > -- $Id: biosqldb-mysql.sql,v 1.40 2004/11/04 01:49:41 lapp Exp $ > > -- conventions: > -- _id is primary internal id (usually autogenerated) > > -- Authors: Ewan Birney, Elia Stupka, Hilmar Lapp, Aaron Mackey > -- > -- Copyright Ewan Birney. You may use, modify, and distribute this > code under > -- the same terms as Perl. See the Perl Artistic License. > -- > -- comments to biosql - biosql-l@open-bio.org > -- > -- Migration of the MySQL schema to InnoDB by Hilmar Lapp gmx.net> > -- Post-Cape Town changes by Hilmar Lapp. > -- Singapore changes by Hilmar Lapp and Aaron Mackey. > -- post-Singapore changes by Hilmar Lapp. > -- > > > I then attempted to access it with biojava-1.3.1 and even though > the comments in version 1.40 of biosqldb-mysql.sql say it is Post-Cape > Town, > I get the following exception calling: > BioSQLSequenceDB db1 = new BioSQLSequenceDB(dbURL, > dbUser, > dbPass, > biodatabase, > createIfMissing); > > org.biojava.bio.BioException: This database appears to be an old > (pre-Cape-Town) BioSQL. If you need to access it, try an older > BioJava snapshot > at > org.biojava.bio.seq.db.biosql.BioSQLSequenceDB.(BioSQLSequenceDB. > java:100) > at TreeFrame.main(TreeFrame.java:87) > Exception in thread "main" > > > Thanks, > > Andrew > > > Hilmar Lapp wrote: > > Whether or not you need sysdba access depends largely on whether you > have a DBA that would do those things you can't normally do yourself, > or grant you permissions that by default Oracle doesn't give to every > user. > > Take a look at the BS-create-all.sql script, and make sure only those > steps are commented in that you really want to be executed. E.g., if > you don't care to create users or your DBA does that then leave out > that step. Similarly for roles. There is also a part that creates > public synonyms for views and by default Oracle doesn't grant this > permission to a user, so if you want that you'll either need sysdba > access or a DBA who grants the permission to you ('you' standing for > the schema owner). However, if all you intend to use this for is > Biojava then the views published as public synonyms (SG_%) aren't even > going to be used and so you can do without that step. You can easily > add that later if at some point you decide to access the schema > through other levels as well. This holds as well for the PL/SQL API; > Biojava will neither need nor use it. > > In other words, for Biojava or Bioperl alone basically what you need > is BS-DDL.sql and then decide on one of the two Biosql APIs. Biojava > needs the view-based API, Bioperl needs (at this point) the > synonym-based. > > Let me know if you hit a problem or if you're unsure how to proceed. > Your endeavor is a good test for the release. > > ????-hilmar > > On Tuesday, January 18, 2005, at 10:32? AM, Andrew Wagner wrote: > > > No error or problems... I did not attempt the Original script.... > just reading > http://www.biojava.org/docs/bj_in_anger/bj_and_bsql_oracle_howto.htm > > "You'll need the latest version of BioJava to take advantage of the > full functionality of BioSQL. This can be downloaded from biojava.org. > You'll also need the latest Oracle BioSQL schema. Here you have a > choice of two options: > > ????? Original: by Hilmar Lapp, the original BioSQL schema takes full > advantage of Oracle's security mechanisms and produces a complex but > high quality schema. You'll need sysdba access to your database to > install it. Go to cvs.open-bio.org, select the biosql project, and > navigate to and download the entire biosql-schema/sql/biosql-ora > folder. > ????? Simplifed: by Len Trigg, this version is simplified in > structure and sits entirely inside a single user account, requiring no > sysdba access to install. You'll have to ask for a copy of the script > from the biosql-l mailing lists." > > I thought Simplified was the place to start but I cna easily start > with the Original if that's what you reccomend. > > Andrew > > > > Hilmar Lapp wrote: > > If there is anything special about this script then I believe it > should be in the repository. I'm not exactly sure what 'simplified' > encompasses here; the biosql schema and API does sit entirely in a > single user account by default. The biosql standard names are not > exported as public synonyms by default, but first, if you're going to > access the database through the schema owner, this doesn't concern you > anyway, and second, there's a script that generates a script with > which to establish the synonyms for any user, and third, it is trivial > to modify this script such that the created synonyms are public > instead of private. > > Did you hit a specific error or problem? > > ????-hilmar > > On Jan 18, 2005, at 8:55 AM, Andrew Wagner wrote: > > > I? am looking for a copy of the script for simplified biosql in > oracle. > > Thanks, > > Andrew > > *Simplifed*: by Len Trigg, this version is simplified in structure > and sits entirely inside a single user account, requiring no sysdba > access to install. You'll have to ask for a copy of the script from > the biosql-l > mailing lists. > > _______________________________________________ > BioSQL-l mailing list > BioSQL-l@open-bio.org > http://open-bio.org/mailman/listinfo/biosql-l > > > > -- ------------------------------------------------------------- Hilmar Lapp email: lapp at gnf.org GNF, San Diego, Ca. 92121 phone: +1-858-812-1757 ------------------------------------------------------------- From phidias51 at yahoo.com Mon Jan 17 08:45:49 2005 From: phidias51 at yahoo.com (Mark Fortner) Date: Thu Jan 20 19:32:28 2005 Subject: [Biojava-dev] [Biojava-dec] use of the URN field Message-ID: <41EBC18D.8020406@yahoo.com> Mark, You might want to take a look at the existing life science URN I3C proposal http://www.i3c.org/wgr/ta/resources/lsid/docs/LSIDSyntax9-20-02.htm. There's also a Life Science URN resolution project here: http://www-124.ibm.com/developerworks/opensource/lsid/?Open&ca=daw-ws-dr This scheme is currently supported in Taverna/myGrid and other projects that make use of LSIDs. The main difference between your proposal and theirs is the formatting of the URN. Regards, Mark Fortner Mgr. Bioinformatics Software Development Lexicon Genetics From dlondon at ebi.ac.uk Thu Jan 20 12:58:59 2005 From: dlondon at ebi.ac.uk (Darin London) Date: Thu Jan 20 19:32:30 2005 Subject: [Biojava-dev] BOSC 2005 Message-ID: <20050120175859.GA7254@parrot.ebi.ac.uk> {Please pass the word!} MEETING ANNOUNCEMENT & CALL FOR SPEAKERS The 6th annual Bioinformatics Open Source Conference (BOSC'2005) is organized by the not-for-profit Open Bioinformatics Foundation. The meeting will take place June 23-24, 2005 in Detroit, Michigan, USA, and is one of several Special Interest Group (SIG) meetings occurring in conjunction with the 13th International Conference on Intelligent Systems for Molecular Biology. see http://www.iscb.org/ismb2005 for more information. Because of the power of many Open Source bioinformatics packages in use by the Research Community today, it is not too presumptuous to say that the work of the Open Source Bioinformatics Community represents the cutting edge of Bioinformatics in general. This has been repeatedly demonstrated by the quality of presentations at previous BOSC conferences. This year, at BOSC 2006, we want to continue this tradition of excellence, while presenting this message to a wider part of the Research Community. Please, pass this message on to anyone you know that is interested in Bioinformatics software. BOSC PROGRAM & CONTACT INFO * Web: http://www.open-bio.org/bosc2005/ * Email: bosc@open-bio.org FEES TO BE ANNOUNCED. Watch the bosc website for more information. SPEAKERS & ABSTRACTS WANTED The program committee is currently seeking abstracts for talks at BOSC 2005. BOSC is a great opportunity for you to tell the community about your use, development, or philosophy of open source software development in bioinformatics. The committee will select several submitted abstracts for 25-minute talks and others for shorter "lightning" talks. Accepted abstracts will be published on the BOSC web site. If you are interested in speaking at BOSC 2005, please send us before April 26, 2005: * an abstract (no more than a few paragraphs) * a URL for the project page, if applicable * information about the open source license used for your software or your release plans. Abstracts will be accepted for submission until April 26, 2005. Abstracts chosen for presentation will be announced May 12, 2005 (before the ISMB Early Registration Deadline). LIGHTNING-TALK SPEAKERS WANTED! The program committee is currently seeking speakers for the lightning talks at BOSC 2005. Lightning talks are quick - only five minutes long - and a great opportunity for you to give people a quick summary of your open source project, code, idea, or vision of the future. If you are interested in giving a lightning talk at BOSC 2005, please send us: * a brief title and summary (one or two lines) * a URL for the project page, if applicable * information about the open source license used for your software or your release plans. We will accept entries on-line until BOSC starts, but space for demos and lightning talks is limited.
SOFTWARE DEMONSTRATIONS WANTED! If you are involved in the development of Open Source Bioinformatics Software, you are invited to provide a short demonstration to attendees of BOSC 2005. If you are interested in giving a software demonstration at BOSC 2005, please send us: * a brief title and summary (one or two lines) * a URL for the project page, if applicable * Internet connectivity requirements (e.g. website Application served on the world wide web, or web based client application). We will accept entries on-line until the BOSC starts, but space for demos and lightning talks is limited. ** Because the mission of the OBF is to promote Open Source software, we will favor submissions for projects that apply a recognized Open Source License, or adhere to the general Open Source Philosophy. See the following websites for further details: href="http://www.opensource.org/licenses/ href="http://www.opensource.org/docs/definition.php SESSION CHAIRS WANTED If you would like to be involved BOSC 2005, we invite you to chair a session. This will not require much of your time. You will be given a schedule of presenters during your session. You simply introduce each speaker, and manage the time of their presentation (25 minutes for full presentations, 5-10 minutes for lightning talks/demos, depending on the number of entries). If you are interested in chairing a session, please send us your name and affiliation (if applicable). -- cheers, Darin London dlondon@ebi.ac.uk European Bioinformatics Institute, +44 (0)1223 49 2566 Wellcome Trust Genome Campus, Hinxton +44 (0)1223 49 4468 (fax) Cambridgeshire CB10 1SD, UK -------------- next part -------------- A non-text attachment was scrubbed... Name: not available Type: application/pgp-signature Size: 189 bytes Desc: not available Url : http://portal.open-bio.org/pipermail/biojava-dev/attachments/20050120/9bb1da79/attachment.bin From rpudimat at informatik.uni-jena.de Fri Jan 21 02:50:18 2005 From: rpudimat at informatik.uni-jena.de (Rainer Pudimat) Date: Sat Jan 22 11:22:07 2005 Subject: [Biojava-dev] Greedy SymbolList.subStr()! Message-ID: <41F0B43A.9020906@informatik.uni-jena.de> Hello, I am debugging a search algorithm because it breaks with an OutOfMemoryException after a long time whereas I would expect constant memory demands. After running a profiler for several parts of the programme, I found out that the biojava method SymbolList.subStr(int,int) (biojava 1.3) is the greedy piece of code. For instance, consider the following two loops which do the same: 1. int r =....; int l =....; int length=0; Sequence seq= .....; while(true) { length = seq.subStr(l,r).length(); } This programm stops with OutOfMemoryException. 2. int r =....; int l =....; int length=0; Sequence seq= .....; while(true) { length = seq.seqString().subString(l-1,r-1).length(); } This programm never ends. Bye, Rainer Pudimat From mark.schreiber at group.novartis.com Sun Jan 23 21:09:09 2005 From: mark.schreiber at group.novartis.com (mark.schreiber@group.novartis.com) Date: Sun Jan 23 21:06:27 2005 Subject: [Biojava-dev] Greedy SymbolList.subStr()! Message-ID: Sounds like a memory leak in the subStr method. Can you tell me what implementation of SymbolList is being used in your program? Probably SimpleSymbolList but I should make sure. Also, does your profiler give any clues such as thousands of Strings being instantiated? Thanks, Mark Rainer Pudimat Sent by: biojava-dev-bounces@portal.open-bio.org 01/21/2005 03:50 PM To: biojava-dev@biojava.org cc: (bcc: Mark Schreiber/GP/Novartis) Subject: [Biojava-dev] Greedy SymbolList.subStr()! Hello, I am debugging a search algorithm because it breaks with an OutOfMemoryException after a long time whereas I would expect constant memory demands. After running a profiler for several parts of the programme, I found out that the biojava method SymbolList.subStr(int,int) (biojava 1.3) is the greedy piece of code. For instance, consider the following two loops which do the same: 1. int r =....; int l =....; int length=0; Sequence seq= .....; while(true) { length = seq.subStr(l,r).length(); } This programm stops with OutOfMemoryException. 2. int r =....; int l =....; int length=0; Sequence seq= .....; while(true) { length = seq.seqString().subString(l-1,r-1).length(); } This programm never ends. Bye, Rainer Pudimat _______________________________________________ biojava-dev mailing list biojava-dev@biojava.org http://biojava.org/mailman/listinfo/biojava-dev From mark.schreiber at group.novartis.com Sun Jan 23 22:37:30 2005 From: mark.schreiber at group.novartis.com (mark.schreiber@group.novartis.com) Date: Sun Jan 23 22:33:34 2005 Subject: [Biojava-dev] OntologySQL public? Message-ID: Hello - Would anyone object if I made OntologySQL public?? It's a really useful class that is used to help BioSQLSequenceDB but it would be nice to be able to use it's functionality directly to manipulate ontologies in a BioSQL db allowing the design of an ontology manipulation client without needing (or being limited by) BioSQlSequenceDB. Would it be horribly dangerous to do this? - Mark From mark.schreiber at group.novartis.com Mon Jan 24 02:20:09 2005 From: mark.schreiber at group.novartis.com (mark.schreiber@group.novartis.com) Date: Mon Jan 24 02:17:40 2005 Subject: [Biojava-dev] OntologySQL public? Message-ID: Actually, can that idea. It is far to sharp around the edges to be public. Mark Schreiber/GP/Novartis@PH Sent by: biojava-dev-bounces@portal.open-bio.org 01/24/2005 11:37 AM To: biojava-dev@open-bio.org cc: (bcc: Mark Schreiber/GP/Novartis) Subject: [Biojava-dev] OntologySQL public? Hello - Would anyone object if I made OntologySQL public?? It's a really useful class that is used to help BioSQLSequenceDB but it would be nice to be able to use it's functionality directly to manipulate ontologies in a BioSQL db allowing the design of an ontology manipulation client without needing (or being limited by) BioSQlSequenceDB. Would it be horribly dangerous to do this? - Mark _______________________________________________ biojava-dev mailing list biojava-dev@biojava.org http://biojava.org/mailman/listinfo/biojava-dev From aldaihani at hotmail.co.uk Mon Jan 24 10:43:13 2005 From: aldaihani at hotmail.co.uk (badr al-daihani) Date: Mon Jan 24 10:40:17 2005 Subject: [Biojava-dev] BLAST-like Message-ID: Hi guys I'm trying to pasre a BLAST file using the BlastPareser Class in biojava in anger but I got this error org.xml.sax.SAXException: Program ncbi-blastp Version 2.2.5 is not supported by the biojava blast-like parsing framework Any hepl will be appreciated Best regards _________________________________________________________________ It's fast, it's easy and it's free. Get MSN Messenger today! http://www.msn.co.uk/messenger From mark.schreiber at group.novartis.com Mon Jan 24 19:52:09 2005 From: mark.schreiber at group.novartis.com (mark.schreiber@group.novartis.com) Date: Mon Jan 24 19:48:18 2005 Subject: [Biojava-dev] BLAST-like Message-ID: You should be able to find the answer in the archives somewhere. You need to call setModeLazy() or something similar on the BlastLikeSAXParser "badr al-daihani" Sent by: biojava-dev-bounces@portal.open-bio.org 01/24/2005 11:43 PM To: biojava-dev@biojava.org cc: (bcc: Mark Schreiber/GP/Novartis) Subject: [Biojava-dev] BLAST-like Hi guys I'm trying to pasre a BLAST file using the BlastPareser Class in biojava in anger but I got this error org.xml.sax.SAXException: Program ncbi-blastp Version 2.2.5 is not supported by the biojava blast-like parsing framework Any hepl will be appreciated Best regards _________________________________________________________________ It's fast, it's easy and it's free. Get MSN Messenger today! http://www.msn.co.uk/messenger _______________________________________________ biojava-dev mailing list biojava-dev@biojava.org http://biojava.org/mailman/listinfo/biojava-dev From aldaihani at hotmail.co.uk Sat Jan 22 20:58:37 2005 From: aldaihani at hotmail.co.uk (badr al-daihani) Date: Tue Jan 25 08:24:41 2005 Subject: [Biojava-dev] inquire Message-ID: Dear Sir I'm new in biojava and I have a project computing the homology between sequences. I have two files. each of them has hundereds of sequence and I would like to compute the similarity between each pair of these files. I would like to use biojava and blast or other alignment tools to do that. so could you please give me a hand and guide me samer _________________________________________________________________ Express yourself with cool new emoticons http://www.msn.co.uk/specials/myemo From mark.schreiber at group.novartis.com Wed Jan 26 00:14:50 2005 From: mark.schreiber at group.novartis.com (mark.schreiber@group.novartis.com) Date: Wed Jan 26 00:12:38 2005 Subject: [Biojava-dev] inquire Message-ID: If you use blast you can parse the results using the examples on this page: http://www.biojava.org/docs/bj_in_anger/index.htm "badr al-daihani" Sent by: biojava-dev-bounces@portal.open-bio.org 01/23/2005 09:58 AM To: biojava-dev@biojava.org cc: (bcc: Mark Schreiber/GP/Novartis) Subject: [Biojava-dev] inquire Dear Sir I'm new in biojava and I have a project computing the homology between sequences. I have two files. each of them has hundereds of sequence and I would like to compute the similarity between each pair of these files. I would like to use biojava and blast or other alignment tools to do that. so could you please give me a hand and guide me samer _________________________________________________________________ Express yourself with cool new emoticons http://www.msn.co.uk/specials/myemo _______________________________________________ biojava-dev mailing list biojava-dev@biojava.org http://biojava.org/mailman/listinfo/biojava-dev From mark.schreiber at group.novartis.com Wed Jan 26 21:54:29 2005 From: mark.schreiber at group.novartis.com (mark.schreiber@group.novartis.com) Date: Wed Jan 26 21:50:26 2005 Subject: [Biojava-dev] memory leak Message-ID: Following a tip off from Rainer I have discovered that there is a memory leak in BioJava caused by calling subList() or subStr() on SimpleSymbolLists The simple routine below will run for a long time but if left it will eventually cause an out of memory error. public void run() throws Exception{ SymbolList sl = DNATools.createDNA("acgctcgagctcgagctagcgactacgagcgctgcag"); while(true){ SymbolList sl2 = sl.subList(1,12); } } I ran this through a profiller and found the following: > 99% of the CPUs time is taken up calling SimpleSymbolList.finalize(), all of this is due to a call to AbstractChangeable.removeChangeListener(). All the calls to finalize() are to be expected as the variable sl2 gets garbage collected a lot but the burden of the removeChangeListener is unexpected. 99% in finalize() is pretty bad when I would have thought the sublist operations would have been more expensive. Overtime the stack becomes overloaded with tens of thousands of WeakReference instances that are apparently not that weak as the GC is not touching them. 99.72% of these WeakReferences are being generated by calls to ChangeSupport.addChangeListener() They are being stored in a HashMap that is taking a bit of a punishing! It would seem that the change support mechanism somewhere has a memory leak and is not releasing references from the HashMap. It is also placing a very heavy burden on the CPU. My java is 1.4.2 and biojava from CVS Can anyone think of what might be going wrong? - Mark Mark Schreiber Principal Scientist (Bioinformatics) Novartis Institute for Tropical Diseases (NITD) 10 Biopolis Road #05-01 Chromos Singapore 138670 www.nitd.novartis.com phone +65 6722 2973 fax +65 6722 2910 From heuermh at acm.org Wed Jan 26 23:49:21 2005 From: heuermh at acm.org (Michael Heuer) Date: Wed Jan 26 23:48:58 2005 Subject: [Biojava-dev] memory leak In-Reply-To: Message-ID: On Thu, 27 Jan 2005 mark.schreiber@group.novartis.com wrote: > Following a tip off from Rainer I have discovered that there is a memory > leak in BioJava caused by calling subList() or subStr() on > SimpleSymbolLists > > The simple routine below will run for a long time but if left it will > eventually cause an out of memory error. > > public void run() throws Exception{ > SymbolList sl = > DNATools.createDNA("acgctcgagctcgagctagcgactacgagcgctgcag"); > while(true){ > SymbolList sl2 = sl.subList(1,12); > } > } > > > I ran this through a profiller and found the following: > > > 99% of the CPUs time is taken up calling SimpleSymbolList.finalize(), > all of this is due to a call to AbstractChangeable.removeChangeListener(). > All the calls to finalize() are to be expected as the variable sl2 gets > garbage collected a lot but the burden of the removeChangeListener is > unexpected. 99% in finalize() is pretty bad when I would have thought the > sublist operations would have been more expensive. > > Overtime the stack becomes overloaded with tens of thousands of > WeakReference instances that are apparently not that weak as the GC is not > touching them. > > 99.72% of these WeakReferences are being generated by calls to > ChangeSupport.addChangeListener() They are being stored in a HashMap that > is taking a bit of a punishing! That seems odd to me, ChangeSupport in cvs doesn't add to or remove from a HashMap, it uses parallel arrays /** * Add a listener that will be informed of changes of a given type (and it's subtypes) * * @param cl the ChangeListener * @param ct the ChangeType it is to be informed of */ public void addChangeListener(ChangeListener cl, ChangeType ct) { if (ct == null) { throw new NullPointerException("Since 1.2, listeners registered for the null changetype are not meaningful. Please register a listener for ChangeType.UNKNOWN instead"); } if(isUnchanging(ct)) { return; } synchronized(this) { growIfNecessary(); types[listenerCount] = ct; listeners[listenerCount] = new WeakReference(cl); listenerCount++; } } But perhaps that is besides the point -- why are any of these change listeners being added at all? Maybe the orginal symbol list listens for changes in each of its sublists? michael > > It would seem that the change support mechanism somewhere has a memory > leak and is not releasing references from the HashMap. It is also placing > a very heavy burden on the CPU. > > My java is 1.4.2 and biojava from CVS > > Can anyone think of what might be going wrong? > > - Mark > > Mark Schreiber > Principal Scientist (Bioinformatics) > > Novartis Institute for Tropical Diseases (NITD) > 10 Biopolis Road > #05-01 Chromos > Singapore 138670 > www.nitd.novartis.com > > phone +65 6722 2973 > fax +65 6722 2910 > > _______________________________________________ > biojava-dev mailing list > biojava-dev@biojava.org > http://biojava.org/mailman/listinfo/biojava-dev > From mark.schreiber at group.novartis.com Thu Jan 27 00:25:39 2005 From: mark.schreiber at group.novartis.com (mark.schreiber@group.novartis.com) Date: Thu Jan 27 00:23:29 2005 Subject: [Biojava-dev] memory leak Message-ID: > synchronized(this) { > growIfNecessary(); > types[listenerCount] = ct; > listeners[listenerCount] = new WeakReference(cl); > listenerCount++; > } This may be the source of the problem. The thing the WeakReference points to is released when memory runs low but a reference to the WeakReference is being maintained (possibly in the listeners[]). - Mark From mark.schreiber at group.novartis.com Thu Jan 27 00:40:44 2005 From: mark.schreiber at group.novartis.com (mark.schreiber@group.novartis.com) Date: Thu Jan 27 00:36:42 2005 Subject: [Biojava-dev] memory leak Message-ID: The problem seems to be in ChangeSupport.removeChangeListener() /** * Remove a listener that was interested in a specific types of changes. * * @param cl a ChangeListener to remove * @param ct the ChangeType that it was interested in */ public void removeChangeListener(ChangeListener cl, ChangeType ct) { synchronized(this) { for(int i = 0; i < listenerCount; i++) { if( (listeners[i].get() == cl) && (types[i] == ct) ) { listenerCount--; System.arraycopy(listeners, i+1, listeners, i, (listenerCount - i)); System.arraycopy(types, i+1, types, i, (listenerCount - i)); return; } } } I think that somewhere there needs to be a nullification of the value at listeners[i]. This is a classic memory leak problem outlined in Item 5 of Joshua Bloch's Effective Java. I think that the loop should be: public void removeChangeListener(ChangeListener cl, ChangeType ct) { synchronized(this) { for(int i = 0; i < listenerCount; i++) { if( (listeners[i].get() == cl) && (types[i] == ct) ) { //prevent memory leak listeners[i] = null; listenerCount--; System.arraycopy(listeners, i+1, listeners, i, (listenerCount - i)); System.arraycopy(types, i+1, types, i, (listenerCount - i)); return; } } } Does this look correct to everyone? I'm still a little concerned about that HashMap though as I don't see it here. It also doesn't address the question of what are all these ChangeListeners needed for (but then I'm no expert on the Changeable API). - Mark Mark Schreiber/GP/Novartis@PH Sent by: biojava-dev-bounces@portal.open-bio.org 01/27/2005 01:25 PM To: Michael Heuer cc: rpudimat@informatik.uni-jena.de, biojava-dev@biojava.org, Michael Heuer , (bcc: Mark Schreiber/GP/Novartis) Subject: Re: [Biojava-dev] memory leak > synchronized(this) { > growIfNecessary(); > types[listenerCount] = ct; > listeners[listenerCount] = new WeakReference(cl); > listenerCount++; > } This may be the source of the problem. The thing the WeakReference points to is released when memory runs low but a reference to the WeakReference is being maintained (possibly in the listeners[]). - Mark _______________________________________________ biojava-dev mailing list biojava-dev@biojava.org http://biojava.org/mailman/listinfo/biojava-dev From mark.schreiber at group.novartis.com Fri Jan 28 04:12:05 2005 From: mark.schreiber at group.novartis.com (mark.schreiber@group.novartis.com) Date: Fri Jan 28 04:10:06 2005 Subject: [Biojava-dev] memory leak Message-ID: Looking at this further. The parent SymbolList adds ChangeListeners to all it's children that are created during subList() or subStr() operations. The children of these subXXX operations are views on the parent. Any Edit operations performed on them are notified to the parent and applied to the parent (who knew? how cool!). So that answers the question about what they are for and also why they are not cleaned up. Following your clue about the reapGarbageListeners() method your correct that it is never called. The only place it can be called is from ChangeSupport.firePreChangeEvent or ChangeSupport.firePostChangeEvent. Because nothing we are doing in the loop is actually causing anything to change there is no chance for reapListeners() to be called. To test this out I changed the loop to: while(true){ SymbolList sl2 = sl.subList(1,12); Edit e = new Edit(4, DNATools.getDNA(), DNATools.g()); sl2.edit(e); } This forces a changeEvent and results in garbageCollection of the WeakReferences and bingo, no more memory leak. So, there needs to be some mechanism by which reapGarbageListeners() can be called without the need for a changeEvent. I'm thinking that the finalize() method of SimpleSymbolList might call it but this is not currently possible as the reapListeners() method is protected and in a different package. Maybe the finalize() method could throw a dummy changeEvent as a bit of a hack and to signal to the world it is dying. Matthew or Thomas, Any ideas?? - Mark Rainer Pudimat 01/27/2005 11:19 PM To: biojava-dev@biojava.org, Mark Schreiber/GP/Novartis@PH cc: Subject: Re: [Biojava-dev] memory leak Hello Mark, I have tried your suggested change in ChangeSuppot.removeChangeListener, but without positive effect on my heap. The problem is that the condition if( (listeners[i].get() == cl) && (types[i] == ct) ) is never fullfilled so your change is never executed. But anyway, it seems the right place to look for. Inspired by the method next to removeChangeListener (reapGarbageListener) I tried to test what Objects to which References listeners[i] points to, are actually null: if( ((listeners[i].get() == cl) && (types[i] == ct)) || listeners[i].get() == null ) This is true in many cases. On the other hand, the method reapGarbageListener was never executed, independent of the number of System.gc() calls. Rainer. mark.schreiber@group.novartis.com schrieb: > The problem seems to be in ChangeSupport.removeChangeListener() > > /** > * Remove a listener that was interested in a specific types of changes. > * > * @param cl a ChangeListener to remove > * @param ct the ChangeType that it was interested in > */ > public void removeChangeListener(ChangeListener cl, ChangeType ct) { > synchronized(this) { > for(int i = 0; i < listenerCount; i++) { > if( (listeners[i].get() == cl) && (types[i] == ct) ) { > listenerCount--; > System.arraycopy(listeners, i+1, listeners, i, (listenerCount - > i)); > System.arraycopy(types, i+1, types, i, (listenerCount - i)); > return; > } > } > } > > I think that somewhere there needs to be a nullification of the value at > listeners[i]. This is a classic memory leak problem outlined in Item 5 of > Joshua Bloch's Effective Java. I think that the loop should be: > > > public void removeChangeListener(ChangeListener cl, ChangeType ct) { > synchronized(this) { > for(int i = 0; i < listenerCount; i++) { > if( (listeners[i].get() == cl) && (types[i] == ct) ) { > > //prevent memory leak > listeners[i] = null; > > listenerCount--; > System.arraycopy(listeners, i+1, listeners, i, (listenerCount - > i)); > System.arraycopy(types, i+1, types, i, (listenerCount - i)); > return; > } > } > } > > Does this look correct to everyone? I'm still a little concerned about > that HashMap though as I don't see it here. It also doesn't address the > question of what are all these ChangeListeners needed for (but then I'm no > expert on the Changeable API). > > - Mark > > > > > > Mark Schreiber/GP/Novartis@PH > Sent by: biojava-dev-bounces@portal.open-bio.org > 01/27/2005 01:25 PM > > > To: Michael Heuer > cc: rpudimat@informatik.uni-jena.de, biojava-dev@biojava.org, Michael Heuer > , (bcc: Mark Schreiber/GP/Novartis) > Subject: Re: [Biojava-dev] memory leak > > > >> synchronized(this) { >> growIfNecessary(); >> types[listenerCount] = ct; >> listeners[listenerCount] = new WeakReference(cl); >> listenerCount++; >> } > > > > This may be the source of the problem. The thing the WeakReference points > to is released when memory runs low but a reference to the WeakReference > is being maintained (possibly in the listeners[]). > > - Mark > _______________________________________________ > biojava-dev mailing list > biojava-dev@biojava.org > http://biojava.org/mailman/listinfo/biojava-dev > > > From heuermh at acm.org Fri Jan 28 14:25:17 2005 From: heuermh at acm.org (Michael Heuer) Date: Fri Jan 28 14:57:27 2005 Subject: [Biojava-dev] memory leak In-Reply-To: Message-ID: On Fri, 28 Jan 2005 mark.schreiber@group.novartis.com wrote: > Looking at this further. > > The parent SymbolList adds ChangeListeners to all it's children that are > created during subList() or subStr() operations. The children of these > subXXX operations are views on the parent. Any Edit operations performed > on them are notified to the parent and applied to the parent (who knew? > how cool!). So that answers the question about what they are for and also > why they are not cleaned up. > > Following your clue about the reapGarbageListeners() method your correct > that it is never called. The only place it can be called is from > ChangeSupport.firePreChangeEvent or ChangeSupport.firePostChangeEvent. > Because nothing we are doing in the loop is actually causing anything to > change there is no chance for reapListeners() to be called. > > To test this out I changed the loop to: > > while(true){ > SymbolList sl2 = sl.subList(1,12); > Edit e = new Edit(4, DNATools.getDNA(), DNATools.g()); > sl2.edit(e); > } > > This forces a changeEvent and results in garbageCollection of the > WeakReferences and bingo, no more memory leak. > > So, there needs to be some mechanism by which reapGarbageListeners() can > be called without the need for a changeEvent. I'm thinking that the > finalize() method of SimpleSymbolList might call it but this is not > currently possible as the reapListeners() method is protected and in a > different package. Maybe the finalize() method could throw a dummy > changeEvent as a bit of a hack and to signal to the world it is dying. How about being called from the synchronized blocks in add and removeChangeListener? michael From rpudimat at informatik.uni-jena.de Thu Jan 27 10:19:22 2005 From: rpudimat at informatik.uni-jena.de (Rainer Pudimat) Date: Sat Jan 29 19:49:55 2005 Subject: [Biojava-dev] memory leak In-Reply-To: References: Message-ID: <41F9067A.70204@informatik.uni-jena.de> Hello Mark, I have tried your suggested change in ChangeSuppot.removeChangeListener, but without positive effect on my heap. The problem is that the condition if( (listeners[i].get() == cl) && (types[i] == ct) ) is never fullfilled so your change is never executed. But anyway, it seems the right place to look for. Inspired by the method next to removeChangeListener (reapGarbageListener) I tried to test what Objects to which References listeners[i] points to, are actually null: if( ((listeners[i].get() == cl) && (types[i] == ct)) || listeners[i].get() == null ) This is true in many cases. On the other hand, the method reapGarbageListener was never executed, independent of the number of System.gc() calls. Rainer. mark.schreiber@group.novartis.com schrieb: > The problem seems to be in ChangeSupport.removeChangeListener() > > /** > * Remove a listener that was interested in a specific types of changes. > * > * @param cl a ChangeListener to remove > * @param ct the ChangeType that it was interested in > */ > public void removeChangeListener(ChangeListener cl, ChangeType ct) { > synchronized(this) { > for(int i = 0; i < listenerCount; i++) { > if( (listeners[i].get() == cl) && (types[i] == ct) ) { > listenerCount--; > System.arraycopy(listeners, i+1, listeners, i, (listenerCount - > i)); > System.arraycopy(types, i+1, types, i, (listenerCount - i)); > return; > } > } > } > > I think that somewhere there needs to be a nullification of the value at > listeners[i]. This is a classic memory leak problem outlined in Item 5 of > Joshua Bloch's Effective Java. I think that the loop should be: > > > public void removeChangeListener(ChangeListener cl, ChangeType ct) { > synchronized(this) { > for(int i = 0; i < listenerCount; i++) { > if( (listeners[i].get() == cl) && (types[i] == ct) ) { > > //prevent memory leak > listeners[i] = null; > > listenerCount--; > System.arraycopy(listeners, i+1, listeners, i, (listenerCount - > i)); > System.arraycopy(types, i+1, types, i, (listenerCount - i)); > return; > } > } > } > > Does this look correct to everyone? I'm still a little concerned about > that HashMap though as I don't see it here. It also doesn't address the > question of what are all these ChangeListeners needed for (but then I'm no > expert on the Changeable API). > > - Mark > > > > > > Mark Schreiber/GP/Novartis@PH > Sent by: biojava-dev-bounces@portal.open-bio.org > 01/27/2005 01:25 PM > > > To: Michael Heuer > cc: rpudimat@informatik.uni-jena.de, biojava-dev@biojava.org, Michael Heuer > , (bcc: Mark Schreiber/GP/Novartis) > Subject: Re: [Biojava-dev] memory leak > > > >> synchronized(this) { >> growIfNecessary(); >> types[listenerCount] = ct; >> listeners[listenerCount] = new WeakReference(cl); >> listenerCount++; >> } > > > > This may be the source of the problem. The thing the WeakReference points > to is released when memory runs low but a reference to the WeakReference > is being maintained (possibly in the listeners[]). > > - Mark > _______________________________________________ > biojava-dev mailing list > biojava-dev@biojava.org > http://biojava.org/mailman/listinfo/biojava-dev > > > From matthew.pocock at ncl.ac.uk Fri Jan 28 04:48:11 2005 From: matthew.pocock at ncl.ac.uk (Matthew Pocock) Date: Sat Jan 29 19:49:57 2005 Subject: [Biojava-dev] memory leak In-Reply-To: References: Message-ID: <41FA0A5B.5010701@ncl.ac.uk> Ah - do we have a parent-child inner/outer class hard/soft reference problem? If you want the sublist to be managed independantly of the parent, you should realy copy it. Is there a method in SymbolListTools or SequenceTools that does this? Matthew mark.schreiber@group.novartis.com wrote: >Looking at this further. > >The parent SymbolList adds ChangeListeners to all it's children that are >created during subList() or subStr() operations. The children of these >subXXX operations are views on the parent. Any Edit operations performed >on them are notified to the parent and applied to the parent (who knew? >how cool!). So that answers the question about what they are for and also >why they are not cleaned up. > >Following your clue about the reapGarbageListeners() method your correct >that it is never called. The only place it can be called is from >ChangeSupport.firePreChangeEvent or ChangeSupport.firePostChangeEvent. >Because nothing we are doing in the loop is actually causing anything to >change there is no chance for reapListeners() to be called. > >To test this out I changed the loop to: > > while(true){ > SymbolList sl2 = sl.subList(1,12); > Edit e = new Edit(4, DNATools.getDNA(), DNATools.g()); > sl2.edit(e); > } > >This forces a changeEvent and results in garbageCollection of the >WeakReferences and bingo, no more memory leak. > >So, there needs to be some mechanism by which reapGarbageListeners() can >be called without the need for a changeEvent. I'm thinking that the >finalize() method of SimpleSymbolList might call it but this is not >currently possible as the reapListeners() method is protected and in a >different package. Maybe the finalize() method could throw a dummy >changeEvent as a bit of a hack and to signal to the world it is dying. > >Matthew or Thomas, Any ideas?? > >- Mark > > > > > > >Rainer Pudimat >01/27/2005 11:19 PM > > > To: biojava-dev@biojava.org, Mark Schreiber/GP/Novartis@PH > cc: > Subject: Re: [Biojava-dev] memory leak > > >Hello Mark, > >I have tried your suggested change in ChangeSuppot.removeChangeListener, >but without positive effect on my heap. > >The problem is that the condition >if( (listeners[i].get() == cl) && (types[i] == ct) ) >is never fullfilled so your change is never executed. > >But anyway, it seems the right place to look for. >Inspired by the method next to removeChangeListener >(reapGarbageListener) I tried to test what Objects >to which References listeners[i] points to, are actually >null: > >if( ((listeners[i].get() == cl) && (types[i] == ct)) || >listeners[i].get() == null ) > >This is true in many cases. > >On the other hand, the method reapGarbageListener was never >executed, independent of the number of >System.gc() calls. > >Rainer. > >mark.schreiber@group.novartis.com schrieb: > > >>The problem seems to be in ChangeSupport.removeChangeListener() >> >> /** >> * Remove a listener that was interested in a specific types of >> >> >changes. > > >> * >> * @param cl a ChangeListener to remove >> * @param ct the ChangeType that it was interested in >> */ >> public void removeChangeListener(ChangeListener cl, ChangeType ct) { >> synchronized(this) { >> for(int i = 0; i < listenerCount; i++) { >> if( (listeners[i].get() == cl) && (types[i] == ct) ) { >> listenerCount--; >> System.arraycopy(listeners, i+1, listeners, i, (listenerCount >> >> >- > > >>i)); >> System.arraycopy(types, i+1, types, i, (listenerCount - i)); >> return; >> } >> } >> } >> >>I think that somewhere there needs to be a nullification of the value at >> >> > > > >>listeners[i]. This is a classic memory leak problem outlined in Item 5 >> >> >of > > >>Joshua Bloch's Effective Java. I think that the loop should be: >> >> >> public void removeChangeListener(ChangeListener cl, ChangeType ct) { >> synchronized(this) { >> for(int i = 0; i < listenerCount; i++) { >> if( (listeners[i].get() == cl) && (types[i] == ct) ) { >> >> //prevent memory leak >> listeners[i] = null; >> >> listenerCount--; >> System.arraycopy(listeners, i+1, listeners, i, (listenerCount >> >> >- > > >>i)); >> System.arraycopy(types, i+1, types, i, (listenerCount - i)); >> return; >> } >> } >> } >> >>Does this look correct to everyone? I'm still a little concerned about >>that HashMap though as I don't see it here. It also doesn't address the >>question of what are all these ChangeListeners needed for (but then I'm >> >> >no > > >>expert on the Changeable API). >> >>- Mark >> >> >> >> >> >>Mark Schreiber/GP/Novartis@PH >>Sent by: biojava-dev-bounces@portal.open-bio.org >>01/27/2005 01:25 PM >> >> >> To: Michael Heuer >> cc: rpudimat@informatik.uni-jena.de, >> >> >biojava-dev@biojava.org, Michael Heuer > > >>, (bcc: Mark Schreiber/GP/Novartis) >> Subject: Re: [Biojava-dev] memory leak >> >> >> >> >> >>> synchronized(this) { >>> growIfNecessary(); >>> types[listenerCount] = ct; >>> listeners[listenerCount] = new WeakReference(cl); >>> listenerCount++; >>> } >>> >>> >> >>This may be the source of the problem. The thing the WeakReference >> >> >points > > >>to is released when memory runs low but a reference to the WeakReference >> >> > > > >>is being maintained (possibly in the listeners[]). >> >>- Mark >>_______________________________________________ >>biojava-dev mailing list >>biojava-dev@biojava.org >>http://biojava.org/mailman/listinfo/biojava-dev >> >> >> >> >> > > > > > > > From mark.schreiber at group.novartis.com Sun Jan 30 19:56:09 2005 From: mark.schreiber at group.novartis.com (mark.schreiber@group.novartis.com) Date: Sun Jan 30 19:52:17 2005 Subject: [Biojava-dev] memory leak Message-ID: Irrespective of this there is still a bug. The problem is when the SymbolList is disposed of the ChangeSupport keeps a soft reference to a null object. The problem seems to be that this line in removeChangeListener() is never fulfilled so the clean up code is never executed. if( (listeners[i].get() == cl) && (types[i] == ct) ) It looks as though the listeners and types arrays get out of synch somewhere and so the condition is never (or maybe rarely) fulfilled. - Mark Matthew Pocock Sent by: biojava-dev-bounces@portal.open-bio.org 01/28/2005 05:48 PM To: Mark Schreiber/GP/Novartis@PH cc: biojava-dev@biojava.org, td2@sanger.ac.uk, Rainer Pudimat Subject: Re: [Biojava-dev] memory leak Ah - do we have a parent-child inner/outer class hard/soft reference problem? If you want the sublist to be managed independantly of the parent, you should realy copy it. Is there a method in SymbolListTools or SequenceTools that does this? Matthew mark.schreiber@group.novartis.com wrote: >Looking at this further. > >The parent SymbolList adds ChangeListeners to all it's children that are >created during subList() or subStr() operations. The children of these >subXXX operations are views on the parent. Any Edit operations performed >on them are notified to the parent and applied to the parent (who knew? >how cool!). So that answers the question about what they are for and also >why they are not cleaned up. > >Following your clue about the reapGarbageListeners() method your correct >that it is never called. The only place it can be called is from >ChangeSupport.firePreChangeEvent or ChangeSupport.firePostChangeEvent. >Because nothing we are doing in the loop is actually causing anything to >change there is no chance for reapListeners() to be called. > >To test this out I changed the loop to: > > while(true){ > SymbolList sl2 = sl.subList(1,12); > Edit e = new Edit(4, DNATools.getDNA(), DNATools.g()); > sl2.edit(e); > } > >This forces a changeEvent and results in garbageCollection of the >WeakReferences and bingo, no more memory leak. > >So, there needs to be some mechanism by which reapGarbageListeners() can >be called without the need for a changeEvent. I'm thinking that the >finalize() method of SimpleSymbolList might call it but this is not >currently possible as the reapListeners() method is protected and in a >different package. Maybe the finalize() method could throw a dummy >changeEvent as a bit of a hack and to signal to the world it is dying. > >Matthew or Thomas, Any ideas?? > >- Mark > > > > > > >Rainer Pudimat >01/27/2005 11:19 PM > > > To: biojava-dev@biojava.org, Mark Schreiber/GP/Novartis@PH > cc: > Subject: Re: [Biojava-dev] memory leak > > >Hello Mark, > >I have tried your suggested change in ChangeSuppot.removeChangeListener, >but without positive effect on my heap. > >The problem is that the condition >if( (listeners[i].get() == cl) && (types[i] == ct) ) >is never fullfilled so your change is never executed. > >But anyway, it seems the right place to look for. >Inspired by the method next to removeChangeListener >(reapGarbageListener) I tried to test what Objects >to which References listeners[i] points to, are actually >null: > >if( ((listeners[i].get() == cl) && (types[i] == ct)) || >listeners[i].get() == null ) > >This is true in many cases. > >On the other hand, the method reapGarbageListener was never >executed, independent of the number of >System.gc() calls. > >Rainer. > >mark.schreiber@group.novartis.com schrieb: > > >>The problem seems to be in ChangeSupport.removeChangeListener() >> >> /** >> * Remove a listener that was interested in a specific types of >> >> >changes. > > >> * >> * @param cl a ChangeListener to remove >> * @param ct the ChangeType that it was interested in >> */ >> public void removeChangeListener(ChangeListener cl, ChangeType ct) { >> synchronized(this) { >> for(int i = 0; i < listenerCount; i++) { >> if( (listeners[i].get() == cl) && (types[i] == ct) ) { >> listenerCount--; >> System.arraycopy(listeners, i+1, listeners, i, (listenerCount >> >> >- > > >>i)); >> System.arraycopy(types, i+1, types, i, (listenerCount - i)); >> return; >> } >> } >> } >> >>I think that somewhere there needs to be a nullification of the value at >> >> > > > >>listeners[i]. This is a classic memory leak problem outlined in Item 5 >> >> >of > > >>Joshua Bloch's Effective Java. I think that the loop should be: >> >> >> public void removeChangeListener(ChangeListener cl, ChangeType ct) { >> synchronized(this) { >> for(int i = 0; i < listenerCount; i++) { >> if( (listeners[i].get() == cl) && (types[i] == ct) ) { >> >> //prevent memory leak >> listeners[i] = null; >> >> listenerCount--; >> System.arraycopy(listeners, i+1, listeners, i, (listenerCount >> >> >- > > >>i)); >> System.arraycopy(types, i+1, types, i, (listenerCount - i)); >> return; >> } >> } >> } >> >>Does this look correct to everyone? I'm still a little concerned about >>that HashMap though as I don't see it here. It also doesn't address the >>question of what are all these ChangeListeners needed for (but then I'm >> >> >no > > >>expert on the Changeable API). >> >>- Mark >> >> >> >> >> >>Mark Schreiber/GP/Novartis@PH >>Sent by: biojava-dev-bounces@portal.open-bio.org >>01/27/2005 01:25 PM >> >> >> To: Michael Heuer >> cc: rpudimat@informatik.uni-jena.de, >> >> >biojava-dev@biojava.org, Michael Heuer > > >>, (bcc: Mark Schreiber/GP/Novartis) >> Subject: Re: [Biojava-dev] memory leak >> >> >> >> >> >>> synchronized(this) { >>> growIfNecessary(); >>> types[listenerCount] = ct; >>> listeners[listenerCount] = new WeakReference(cl); >>> listenerCount++; >>> } >>> >>> >> >>This may be the source of the problem. The thing the WeakReference >> >> >points > > >>to is released when memory runs low but a reference to the WeakReference >> >> > > > >>is being maintained (possibly in the listeners[]). >> >>- Mark >>_______________________________________________ >>biojava-dev mailing list >>biojava-dev@biojava.org >>http://biojava.org/mailman/listinfo/biojava-dev >> >> >> >> >> > > > > > > > _______________________________________________ biojava-dev mailing list biojava-dev@biojava.org http://biojava.org/mailman/listinfo/biojava-dev